Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354700 | XP_033515266.1 | 97.834 | 277 | 6 | 0 | 1 | 277 | 1 | 277 | 0.0 | 547 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354700 | sp|P0CC47|NU2C2_CITSI | 94.585 | 277 | 8 | 1 | 1 | 277 | 124 | 393 | 0.0 | 517 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354700 | A0A7D4X479 | 97.509 | 281 | 3 | 1 | 1 | 277 | 106 | 386 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095150 | Msa1354700 | 0.824923 | 6.202845e-54 | -8.615850e-47 |
| Msa0095190 | Msa1354700 | 0.809651 | 1.702623e-50 | -8.615850e-47 |
| Msa0095230 | Msa1354700 | 0.805967 | 1.033441e-49 | -8.615850e-47 |
| Msa0095280 | Msa1354700 | 0.823591 | 1.275254e-53 | -8.615850e-47 |
| Msa0095290 | Msa1354700 | 0.802175 | 6.356309e-49 | -8.615850e-47 |
| Msa1354320 | Msa1354700 | 0.803099 | 4.097215e-49 | -8.615850e-47 |
| Msa1354420 | Msa1354700 | 0.854502 | 1.179647e-61 | -8.615850e-47 |
| Msa1354430 | Msa1354700 | 0.905901 | 2.627556e-80 | -8.615850e-47 |
| Msa1354480 | Msa1354700 | 0.891650 | 3.273794e-74 | -8.615850e-47 |
| Msa1354490 | Msa1354700 | 0.852205 | 5.379072e-61 | -8.615850e-47 |
| Msa1354500 | Msa1354700 | 0.835924 | 1.263674e-56 | -8.615850e-47 |
| Msa1354550 | Msa1354700 | 0.859863 | 3.081978e-63 | -8.615850e-47 |
| Msa1354560 | Msa1354700 | 0.922345 | 1.109305e-88 | -8.615850e-47 |
| Msa1354610 | Msa1354700 | 0.901478 | 2.573158e-78 | -8.615850e-47 |
| Msa1354620 | Msa1354700 | 0.835747 | 1.401676e-56 | -8.615850e-47 |
| Msa1354630 | Msa1354700 | 0.844321 | 8.127071e-59 | -8.615850e-47 |
| Msa1354680 | Msa1354700 | 0.829491 | 4.996799e-55 | -8.615850e-47 |
| Msa1354690 | Msa1354700 | 0.816631 | 5.005729e-52 | -8.615850e-47 |
| Msa1354700 | Msa1354740 | 0.895301 | 1.091128e-75 | -8.615850e-47 |
| Msa1354700 | Msa1354750 | 0.845371 | 4.234320e-59 | -8.615850e-47 |
| Msa1354700 | Msa1354760 | 0.834566 | 2.784018e-56 | -8.615850e-47 |
| Msa1354700 | Msa1354810 | 0.841891 | 3.609037e-58 | -8.615850e-47 |
| Msa1354700 | Msa1354820 | 0.902360 | 1.050027e-78 | -8.615850e-47 |
| Msa1354700 | Msa1354860 | 0.813137 | 2.981093e-51 | -8.615850e-47 |
| Msa1354700 | Msa1354880 | 0.801593 | 8.369721e-49 | -8.615850e-47 |
| Msa1354700 | Msa1354900 | 0.808070 | 3.710552e-50 | -8.615850e-47 |
| Msa1354700 | Msa1354920 | 0.839202 | 1.824894e-57 | -8.615850e-47 |
| Msa1354700 | Msa1354980 | 0.850425 | 1.712461e-60 | -8.615850e-47 |
| Msa1354700 | Msa1354990 | 0.917885 | 3.076104e-86 | -8.615850e-47 |
| Msa1354700 | Msa1355030 | 0.829558 | 4.814059e-55 | -8.615850e-47 |
| Msa1354700 | Msa1355080 | 0.823384 | 1.425928e-53 | -8.615850e-47 |
| Msa1354700 | Msa1355090 | 0.830090 | 3.570617e-55 | -8.615850e-47 |
| Msa1354700 | Msa1365890 | 0.841372 | 4.946961e-58 | -8.615850e-47 |
| Msa1354700 | Msa1365900 | 0.873555 | 1.342686e-67 | -8.615850e-47 |
| Msa1354700 | Msa1365950 | 0.856326 | 3.470136e-62 | -8.615850e-47 |
| Msa1354700 | Msa1365960 | 0.831524 | 1.589724e-55 | -8.615850e-47 |
| Msa1354700 | Msa1365970 | 0.835811 | 1.350385e-56 | -8.615850e-47 |
| Msa1354700 | Msa1366080 | 0.838517 | 2.743877e-57 | -8.615850e-47 |
| Msa1354700 | Msa1366090 | 0.886484 | 3.287215e-72 | -8.615850e-47 |
| Msa1354700 | Msa1368230 | 0.831932 | 1.261249e-55 | -8.615850e-47 |
| Msa1354700 | Msa1368240 | 0.824342 | 8.501057e-54 | -8.615850e-47 |
| Msa1354700 | Msa1380550 | 0.824330 | 8.558554e-54 | -8.615850e-47 |
| Msa1354700 | Msa1380590 | 0.800331 | 1.515570e-48 | -8.615850e-47 |
| Msa1354700 | Msa1380610 | 0.850805 | 1.338551e-60 | -8.615850e-47 |
| Msa1354700 | Msa1380620 | 0.812221 | 4.727515e-51 | -8.615850e-47 |
| Msa1354700 | Msa1385410 | 0.820219 | 7.699065e-53 | -8.615850e-47 |
| Msa1354700 | Msa1385420 | 0.876392 | 1.448582e-68 | -8.615850e-47 |
| Msa1354700 | Msa1391090 | 0.869830 | 2.307005e-66 | -8.615850e-47 |
| Msa1354700 | Msa1391100 | 0.842437 | 2.587958e-58 | -8.615850e-47 |
| Msa1354700 | Msa1391110 | 0.839875 | 1.219651e-57 | -8.615850e-47 |
| Msa1354700 | Msa1391160 | 0.828729 | 7.645746e-55 | -8.615850e-47 |
| Msa1354700 | Msa1391170 | 0.866086 | 3.687030e-65 | -8.615850e-47 |
| Msa1354700 | Msa1391220 | 0.866799 | 2.189682e-65 | -8.615850e-47 |
| Msa1354700 | Msa1391230 | 0.842556 | 2.405926e-58 | -8.615850e-47 |
| Msa1354700 | Msa1391240 | 0.827260 | 1.725522e-54 | -8.615850e-47 |
| Msa1354700 | Msa1394030 | 0.834418 | 3.031308e-56 | -8.615850e-47 |
| Msa1354700 | Msa1394040 | 0.817764 | 2.783993e-52 | -8.615850e-47 |
| Msa1354700 | Msa1394060 | 0.812424 | 4.269961e-51 | -8.615850e-47 |
| Msa1354700 | Msa1394080 | 0.826236 | 3.031118e-54 | -8.615850e-47 |
| Msa1354700 | Msa1394130 | 0.805146 | 1.536870e-49 | -8.615850e-47 |
| Msa1354700 | Msa1394150 | 0.817962 | 2.511428e-52 | -8.615850e-47 |
| Msa1354700 | Msa1394160 | 0.832012 | 1.205198e-55 | -8.615850e-47 |
| Msa1354700 | Msa1394210 | 0.819369 | 1.204069e-52 | -8.615850e-47 |
| Msa1354700 | Msa1394230 | 0.807038 | 6.142352e-50 | -8.615850e-47 |
| Msa1354700 | Msa1394250 | 0.823228 | 1.550482e-53 | -8.615850e-47 |
| Msa1354700 | Msa1394270 | 0.825109 | 5.608777e-54 | -8.615850e-47 |
| Msa1354700 | Msa1460120 | 0.828162 | 1.048076e-54 | -8.615850e-47 |
| Msa1354700 | Msa1460130 | 0.838011 | 3.704997e-57 | -8.615850e-47 |
| Msa0611450 | Msa1354700 | 0.801749 | 7.774663e-49 | -8.615850e-47 |
| Msa0694170 | Msa1354700 | 0.800879 | 1.171320e-48 | -8.615850e-47 |
| Msa0707870 | Msa1354700 | 0.802130 | 6.491796e-49 | -8.615850e-47 |
| Msa0173880 | Msa1354700 | 0.810699 | 1.012427e-50 | -8.615850e-47 |
| Msa0202640 | Msa1354700 | 0.832419 | 9.553688e-56 | -8.615850e-47 |
| Msa0221840 | Msa1354700 | 0.817537 | 3.132862e-52 | -8.615850e-47 |
| Msa1305090 | Msa1354700 | 0.812193 | 4.796402e-51 | -8.615850e-47 |
| Msa1333220 | Msa1354700 | 0.800951 | 1.132822e-48 | -8.615850e-47 |
| Msa0370210 | Msa1354700 | 0.807963 | 3.909862e-50 | -8.615850e-47 |
| Msa0405420 | Msa1354700 | 0.848823 | 4.795317e-60 | -8.615850e-47 |
| Msa0405440 | Msa1354700 | 0.808668 | 2.766353e-50 | -8.615850e-47 |
| Msa0405510 | Msa1354700 | 0.872399 | 3.276017e-67 | -8.615850e-47 |
| Msa0405520 | Msa1354700 | 0.812152 | 4.894282e-51 | -8.615850e-47 |
| Msa0405530 | Msa1354700 | 0.831081 | 2.042757e-55 | -8.615850e-47 |
| Msa0449920 | Msa1354700 | 0.805705 | 1.173441e-49 | -8.615850e-47 |
| Msa0983630 | Msa1354700 | 0.845423 | 4.099308e-59 | -8.615850e-47 |
| Msa0983640 | Msa1354700 | 0.857557 | 1.504929e-62 | -8.615850e-47 |
| Msa0983680 | Msa1354700 | 0.803484 | 3.409493e-49 | -8.615850e-47 |
| Msa1022050 | Msa1354700 | 0.846202 | 2.519039e-59 | -8.615850e-47 |
| Msa1022060 | Msa1354700 | 0.860801 | 1.602911e-63 | -8.615850e-47 |
| Msa1064410 | Msa1354700 | 0.827098 | 1.887329e-54 | -8.615850e-47 |
| Msa1086080 | Msa1354700 | 0.815015 | 1.148011e-51 | -8.615850e-47 |
| Msa1086090 | Msa1354700 | 0.836254 | 1.042348e-56 | -8.615850e-47 |
| Msa1086140 | Msa1354700 | 0.833138 | 6.335503e-56 | -8.615850e-47 |
| Msa1086150 | Msa1354700 | 0.801193 | 1.010847e-48 | -8.615850e-47 |
| Msa1086180 | Msa1354700 | 0.805177 | 1.513971e-49 | -8.615850e-47 |
| Msa1086190 | Msa1354700 | 0.809954 | 1.465551e-50 | -8.615850e-47 |
| Msa1086200 | Msa1354700 | 0.849209 | 3.744162e-60 | -8.615850e-47 |
| Msa1086250 | Msa1354700 | 0.807777 | 4.282408e-50 | -8.615850e-47 |
| Msa1086270 | Msa1354700 | 0.839221 | 1.803733e-57 | -8.615850e-47 |
| Msa1086280 | Msa1354700 | 0.818687 | 1.721459e-52 | -8.615850e-47 |
| Msa1086300 | Msa1354700 | 0.815612 | 8.457897e-52 | -8.615850e-47 |
| Msa1086320 | Msa1354700 | 0.811443 | 6.983969e-51 | -8.615850e-47 |
| Msa1086350 | Msa1354700 | 0.812651 | 3.809063e-51 | -8.615850e-47 |
| Msa1086360 | Msa1354700 | 0.800955 | 1.130603e-48 | -8.615850e-47 |
| Msa1086380 | Msa1354700 | 0.802058 | 6.716553e-49 | -8.615850e-47 |
| Msa1086420 | Msa1354700 | 0.818517 | 1.881156e-52 | -8.615850e-47 |
| Msa1086430 | Msa1354700 | 0.801971 | 7.000598e-49 | -8.615850e-47 |
| Msa1086450 | Msa1354700 | 0.811280 | 7.576881e-51 | -8.615850e-47 |
| Msa1086470 | Msa1354700 | 0.813510 | 2.467610e-51 | -8.615850e-47 |
| Msa1086510 | Msa1354700 | 0.817854 | 2.657584e-52 | -8.615850e-47 |
| Msa1086550 | Msa1354700 | 0.886355 | 3.675120e-72 | -8.615850e-47 |
| Msa1086590 | Msa1354700 | 0.815971 | 7.033228e-52 | -8.615850e-47 |
| Msa1086600 | Msa1354700 | 0.878628 | 2.408220e-69 | -8.615850e-47 |
| Msa1086640 | Msa1354700 | 0.802326 | 5.915289e-49 | -8.615850e-47 |
| Msa1086660 | Msa1354700 | 0.819128 | 1.366743e-52 | -8.615850e-47 |
| Msa1086670 | Msa1354700 | 0.810136 | 1.339069e-50 | -8.615850e-47 |
| Msa1086680 | Msa1354700 | 0.806976 | 6.332502e-50 | -8.615850e-47 |
| Msa1086720 | Msa1354700 | 0.894266 | 2.899143e-75 | -8.615850e-47 |
| Msa1086730 | Msa1354700 | 0.836877 | 7.233907e-57 | -8.615850e-47 |
| Msa1086740 | Msa1354700 | 0.832517 | 9.034932e-56 | -8.615850e-47 |
| Msa1086790 | Msa1354700 | 0.851536 | 8.327526e-61 | -8.615850e-47 |
| Msa1086800 | Msa1354700 | 0.876449 | 1.384289e-68 | -8.615850e-47 |
| Msa1086840 | Msa1354700 | 0.814076 | 1.852170e-51 | -8.615850e-47 |
| Msa1086860 | Msa1354700 | 0.825389 | 4.814452e-54 | -8.615850e-47 |
| Msa1086880 | Msa1354700 | 0.802141 | 6.458386e-49 | -8.615850e-47 |
| Msa1086890 | Msa1354700 | 0.821346 | 4.239030e-53 | -8.615850e-47 |
| Msa1086900 | Msa1354700 | 0.848412 | 6.231395e-60 | -8.615850e-47 |
| Msa1086960 | Msa1354700 | 0.864246 | 1.396066e-64 | -8.615850e-47 |
| Msa1086970 | Msa1354700 | 0.864903 | 8.695702e-65 | -8.615850e-47 |
| Msa1087030 | Msa1354700 | 0.870950 | 9.905154e-67 | -8.615850e-47 |
| Msa1087040 | Msa1354700 | 0.847312 | 1.251915e-59 | -8.615850e-47 |
| Msa1087050 | Msa1354700 | 0.833732 | 4.503049e-56 | -8.615850e-47 |
| Msa1087110 | Msa1354700 | 0.864070 | 1.584381e-64 | -8.615850e-47 |
| Msa1087120 | Msa1354700 | 0.874400 | 6.956318e-68 | -8.615850e-47 |
| Msa0263770 | Msa1354700 | 0.824098 | 9.704227e-54 | -8.615850e-47 |
| Msa0268170 | Msa1354700 | 0.808555 | 2.924162e-50 | -8.615850e-47 |
| Msa0268190 | Msa1354700 | 0.830480 | 2.867627e-55 | -8.615850e-47 |
| Msa0268210 | Msa1354700 | 0.814363 | 1.600403e-51 | -8.615850e-47 |
| Msa0268250 | Msa1354700 | 0.873443 | 1.465137e-67 | -8.615850e-47 |
| Msa0268260 | Msa1354700 | 0.838828 | 2.280322e-57 | -8.615850e-47 |
| Msa0268270 | Msa1354700 | 0.837374 | 5.398546e-57 | -8.615850e-47 |
| Msa0268300 | Msa1354700 | 0.850263 | 1.901740e-60 | -8.615850e-47 |
| Msa0268310 | Msa1354700 | 0.868092 | 8.438518e-66 | -8.615850e-47 |
| Msa0268350 | Msa1354700 | 0.818341 | 2.062396e-52 | -8.615850e-47 |
| Msa0268370 | Msa1354700 | 0.801447 | 8.965296e-49 | -8.615850e-47 |
| Msa0268390 | Msa1354700 | 0.805141 | 1.540291e-49 | -8.615850e-47 |
| Msa0268400 | Msa1354700 | 0.812393 | 4.337454e-51 | -8.615850e-47 |
| Msa0268410 | Msa1354700 | 0.821357 | 4.215446e-53 | -8.615850e-47 |
| Msa0268430 | Msa1354700 | 0.829498 | 4.976593e-55 | -8.615850e-47 |
| Msa0268450 | Msa1354700 | 0.825067 | 5.738443e-54 | -8.615850e-47 |
| Msa0268530 | Msa1354700 | 0.802683 | 4.993828e-49 | -8.615850e-47 |
| Msa0268550 | Msa1354700 | 0.824242 | 8.975575e-54 | -8.615850e-47 |
| Msa0268570 | Msa1354700 | 0.840994 | 6.215973e-58 | -8.615850e-47 |
| Msa0268630 | Msa1354700 | 0.823496 | 1.342282e-53 | -8.615850e-47 |
| Msa0268640 | Msa1354700 | 0.801910 | 7.203323e-49 | -8.615850e-47 |
| Msa0268670 | Msa1354700 | 0.813347 | 2.679811e-51 | -8.615850e-47 |
| Msa0268720 | Msa1354700 | 0.801092 | 1.059675e-48 | -8.615850e-47 |
| Msa0268740 | Msa1354700 | 0.821434 | 4.046242e-53 | -8.615850e-47 |
| Msa0268750 | Msa1354700 | 0.852588 | 4.184621e-61 | -8.615850e-47 |
| Msa0268830 | Msa1354700 | 0.822864 | 1.885041e-53 | -8.615850e-47 |
| Msa0268840 | Msa1354700 | 0.801095 | 1.058375e-48 | -8.615850e-47 |
| Msa0268860 | Msa1354700 | 0.831128 | 1.989243e-55 | -8.615850e-47 |
| Msa0268880 | Msa1354700 | 0.811919 | 5.503183e-51 | -8.615850e-47 |
| Msa0268920 | Msa1354700 | 0.800143 | 1.654969e-48 | -8.615850e-47 |
| Msa0268940 | Msa1354700 | 0.810622 | 1.051874e-50 | -8.615850e-47 |
| Msa0268950 | Msa1354700 | 0.809258 | 2.068215e-50 | -8.615850e-47 |
| Msa0268960 | Msa1354700 | 0.843118 | 1.705685e-58 | -8.615850e-47 |
| Msa0269040 | Msa1354700 | 0.826230 | 3.039915e-54 | -8.615850e-47 |
| Msa0269050 | Msa1354700 | 0.811363 | 7.268974e-51 | -8.615850e-47 |
| Msa0269070 | Msa1354700 | 0.833344 | 5.629526e-56 | -8.615850e-47 |
| Msa0269090 | Msa1354700 | 0.817136 | 3.856834e-52 | -8.615850e-47 |
| Msa0269130 | Msa1354700 | 0.869717 | 2.511503e-66 | -8.615850e-47 |
| Msa0269140 | Msa1354700 | 0.852187 | 5.442968e-61 | -8.615850e-47 |
| Msa0269150 | Msa1354700 | 0.843368 | 1.462432e-58 | -8.615850e-47 |
| Msa0344180 | Msa1354700 | 0.801793 | 7.613220e-49 | -8.615850e-47 |
| Msa0344190 | Msa1354700 | 0.828780 | 7.431133e-55 | -8.615850e-47 |
| Msa0344210 | Msa1354700 | 0.816970 | 4.201745e-52 | -8.615850e-47 |
| Msa0344260 | Msa1354700 | 0.814530 | 1.469785e-51 | -8.615850e-47 |
| Msa0344310 | Msa1354700 | 0.811153 | 8.072317e-51 | -8.615850e-47 |
| Msa1143120 | Msa1354700 | 0.822043 | 2.924642e-53 | -8.615850e-47 |
| Msa1143160 | Msa1354700 | 0.807978 | 3.881099e-50 | -8.615850e-47 |
| Msa1143170 | Msa1354700 | 0.835764 | 1.387385e-56 | -8.615850e-47 |
| Msa0484040 | Msa1354700 | 0.810715 | 1.004036e-50 | -8.615850e-47 |
| Msa0581090 | Msa1354700 | 0.801979 | 6.974476e-49 | -8.615850e-47 |
| Msa0582510 | Msa1354700 | 0.830901 | 2.261878e-55 | -8.615850e-47 |
| Msa0582520 | Msa1354700 | 0.802428 | 5.637255e-49 | -8.615850e-47 |
| Msa0582540 | Msa1354700 | 0.817752 | 2.801753e-52 | -8.615850e-47 |
| Msa0582560 | Msa1354700 | 0.805647 | 1.206875e-49 | -8.615850e-47 |
| Msa0582590 | Msa1354700 | 0.807106 | 5.944836e-50 | -8.615850e-47 |
| Msa0582610 | Msa1354700 | 0.818290 | 2.117288e-52 | -8.615850e-47 |
| Msa0582630 | Msa1354700 | 0.804867 | 1.757400e-49 | -8.615850e-47 |
| Msa0582640 | Msa1354700 | 0.810629 | 1.048218e-50 | -8.615850e-47 |
| Msa0582650 | Msa1354700 | 0.847146 | 1.391103e-59 | -8.615850e-47 |
| Msa0582690 | Msa1354700 | 0.826522 | 2.591074e-54 | -8.615850e-47 |
| Msa0582700 | Msa1354700 | 0.818096 | 2.342300e-52 | -8.615850e-47 |
| Msa0582720 | Msa1354700 | 0.807019 | 6.200301e-50 | -8.615850e-47 |
| Msa0582730 | Msa1354700 | 0.819173 | 1.334812e-52 | -8.615850e-47 |
| Msa0582750 | Msa1354700 | 0.801169 | 1.022345e-48 | -8.615850e-47 |
| Msa0582760 | Msa1354700 | 0.807537 | 4.817049e-50 | -8.615850e-47 |
| Msa0582770 | Msa1354700 | 0.848739 | 5.058030e-60 | -8.615850e-47 |
| Msa0582780 | Msa1354700 | 0.801888 | 7.278197e-49 | -8.615850e-47 |
| Msa0582810 | Msa1354700 | 0.831912 | 1.275486e-55 | -8.615850e-47 |
| Msa0582820 | Msa1354700 | 0.802776 | 4.779045e-49 | -8.615850e-47 |
| Msa0582840 | Msa1354700 | 0.800590 | 1.342148e-48 | -8.615850e-47 |
| Msa0582860 | Msa1354700 | 0.826309 | 2.911746e-54 | -8.615850e-47 |
| Msa0582870 | Msa1354700 | 0.825231 | 5.246726e-54 | -8.615850e-47 |
| Msa0582890 | Msa1354700 | 0.804993 | 1.654505e-49 | -8.615850e-47 |
| Msa0582910 | Msa1354700 | 0.818852 | 1.578725e-52 | -8.615850e-47 |
| Msa0582920 | Msa1354700 | 0.842860 | 1.998224e-58 | -8.615850e-47 |
| Msa0591310 | Msa1354700 | 0.885013 | 1.172059e-71 | -8.615850e-47 |
| Msa0591350 | Msa1354700 | 0.830189 | 3.378699e-55 | -8.615850e-47 |
| Msa0591360 | Msa1354700 | 0.853113 | 2.960735e-61 | -8.615850e-47 |
| Msa0591380 | Msa1354700 | 0.811045 | 8.520337e-51 | -8.615850e-47 |
| Msa0867680 | Msa1354700 | 0.846826 | 1.701637e-59 | -8.615850e-47 |
| Msa0867690 | Msa1354700 | 0.847532 | 1.089457e-59 | -8.615850e-47 |
| Msa0908220 | Msa1354700 | 0.902095 | 1.376064e-78 | -8.615850e-47 |
| Msa0908230 | Msa1354700 | 0.843952 | 1.020626e-58 | -8.615850e-47 |
| Msa0908240 | Msa1354700 | 0.823158 | 1.610556e-53 | -8.615850e-47 |
| Msa0908310 | Msa1354700 | 0.868640 | 5.617447e-66 | -8.615850e-47 |
| Msa0908320 | Msa1354700 | 0.898912 | 3.332002e-77 | -8.615850e-47 |
| Msa0908370 | Msa1354700 | 0.838747 | 2.392479e-57 | -8.615850e-47 |
| Msa0908380 | Msa1354700 | 0.875965 | 2.032505e-68 | -8.615850e-47 |
| Msa0908430 | Msa1354700 | 0.874428 | 6.804051e-68 | -8.615850e-47 |
| Msa0908440 | Msa1354700 | 0.839680 | 1.370867e-57 | -8.615850e-47 |
| Msa0908450 | Msa1354700 | 0.846381 | 2.251071e-59 | -8.615850e-47 |
| Msa0908480 | Msa1354700 | 0.822345 | 2.490180e-53 | -8.615850e-47 |
| Msa0908530 | Msa1354700 | 0.852609 | 4.126987e-61 | -8.615850e-47 |
| Msa0908540 | Msa1354700 | 0.881797 | 1.779788e-70 | -8.615850e-47 |
| Msa0908590 | Msa1354700 | 0.856510 | 3.063649e-62 | -8.615850e-47 |
| Msa0908600 | Msa1354700 | 0.840342 | 9.212484e-58 | -8.615850e-47 |
| Msa0908610 | Msa1354700 | 0.817299 | 3.543372e-52 | -8.615850e-47 |
| Msa0908650 | Msa1354700 | 0.869538 | 2.873467e-66 | -8.615850e-47 |
| Msa0908660 | Msa1354700 | 0.847494 | 1.116012e-59 | -8.615850e-47 |
| Msa0908670 | Msa1354700 | 0.850864 | 1.288631e-60 | -8.615850e-47 |
| Msa0908720 | Msa1354700 | 0.841945 | 3.492289e-58 | -8.615850e-47 |
| Msa0908730 | Msa1354700 | 0.874538 | 6.247465e-68 | -8.615850e-47 |
| Msa0911190 | Msa1354700 | 0.817663 | 2.933619e-52 | -8.615850e-47 |
| Msa0911200 | Msa1354700 | 0.847970 | 8.256453e-60 | -8.615850e-47 |
| Msa0924830 | Msa1354700 | 0.837175 | 6.069777e-57 | -8.615850e-47 |
| Msa0924870 | Msa1354700 | 0.816291 | 5.966428e-52 | -8.615850e-47 |
| Msa0924880 | Msa1354700 | 0.828933 | 6.823403e-55 | -8.615850e-47 |
| Msa0924930 | Msa1354700 | 0.853034 | 3.118747e-61 | -8.615850e-47 |
| Msa0924940 | Msa1354700 | 0.906592 | 1.258583e-80 | -8.615850e-47 |
| Msa0924990 | Msa1354700 | 0.812099 | 5.028206e-51 | -8.615850e-47 |
| Msa0925040 | Msa1354700 | 0.801312 | 9.554008e-49 | -8.615850e-47 |
| Msa0925100 | Msa1354700 | 0.838718 | 2.434875e-57 | -8.615850e-47 |
| Msa0925110 | Msa1354700 | 0.889378 | 2.555986e-73 | -8.615850e-47 |
| Msa0931070 | Msa1354700 | 0.807325 | 5.340501e-50 | -8.615850e-47 |
| Msa0931080 | Msa1354700 | 0.811205 | 7.865919e-51 | -8.615850e-47 |
| Msa0931110 | Msa1354700 | 0.806419 | 8.301509e-50 | -8.615850e-47 |
| Msa0931130 | Msa1354700 | 0.831185 | 1.926029e-55 | -8.615850e-47 |
| Msa0931160 | Msa1354700 | 0.816950 | 4.245153e-52 | -8.615850e-47 |
| Msa0931220 | Msa1354700 | 0.823560 | 1.296970e-53 | -8.615850e-47 |
| Msa0931230 | Msa1354700 | 0.832897 | 7.271871e-56 | -8.615850e-47 |
| Msa0931260 | Msa1354700 | 0.841640 | 4.203674e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354700 | MtrunA17_Chr1g0195541 | 99.242 | 132 | 1 | 0 | 1 | 132 | 1 | 132 | 3.20e-90 | 265 |
| Msa1354700 | MtrunA17_CPg0492431 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 1.09e-88 | 265 |
| Msa1354700 | MtrunA17_Chr3g0090851 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 1.09e-88 | 265 |
| Msa1354700 | MtrunA17_Chr4g0016091 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 1.09e-88 | 265 |
| Msa1354700 | MtrunA17_Chr3g0090871 | 98.851 | 87 | 1 | 0 | 191 | 277 | 1 | 87 | 1.28e-54 | 175 |
| Msa1354700 | MtrunA17_CPg0492451 | 98.851 | 87 | 1 | 0 | 191 | 277 | 1 | 87 | 9.77e-54 | 173 |
| Msa1354700 | MtrunA17_Chr4g0016071 | 98.851 | 87 | 1 | 0 | 191 | 277 | 1 | 87 | 9.77e-54 | 173 |
| Msa1354700 | MtrunA17_Chr1g0153231 | 97.297 | 74 | 2 | 0 | 58 | 131 | 1 | 74 | 2.45e-45 | 147 |
| Msa1354700 | MtrunA17_CPg0492181 | 25.738 | 237 | 158 | 7 | 6 | 238 | 147 | 369 | 1.61e-14 | 73.6 |
| Msa1354700 | MtrunA17_Chr4g0000831 | 26.087 | 230 | 152 | 7 | 6 | 231 | 32 | 247 | 3.11e-14 | 71.2 |
| Msa1354700 | MtrunA17_Chr0c03g0489881 | 34.459 | 148 | 86 | 4 | 129 | 276 | 2 | 138 | 3.14e-13 | 67.4 |
| Msa1354700 | MtrunA17_MTg0491931 | 34.459 | 148 | 86 | 4 | 129 | 276 | 2 | 138 | 3.14e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354700 | ATCG00890.1 | 93.502 | 277 | 11 | 1 | 1 | 277 | 1 | 270 | 1.15e-172 | 483 |
| Msa1354700 | ATCG01250.1 | 93.502 | 277 | 11 | 1 | 1 | 277 | 1 | 270 | 1.15e-172 | 483 |
| Msa1354700 | ATCG01010.1 | 26.496 | 234 | 154 | 7 | 9 | 238 | 130 | 349 | 8.07e-14 | 72.0 |
| Msa1354700 | AT2G07689.1 | 34.228 | 149 | 85 | 5 | 129 | 276 | 2 | 138 | 1.58e-12 | 65.9 |
Find 61 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGATATGTAATTAT+TGG | 0.189063 | tig0014543:+454175 | Msa1354700:CDS |
| CATGGTTTCTCTTGGCTATA+TGG | 0.197078 | tig0014543:+453082 | Msa1354700:CDS |
| TGGGGCAAGCTCTTCTATTC+TGG | 0.197255 | tig0014543:+453057 | Msa1354700:CDS |
| GCTATTCTTAGCATGCTATT+AGG | 0.213688 | tig0014543:+454091 | Msa1354700:CDS |
| TTTGCTTGCATTGTGTTATT+TGG | 0.223841 | tig0014543:+454280 | Msa1354700:CDS |
| ATTAGACCGTACATCTTTCT+TGG | 0.278852 | tig0014543:-453005 | None:intergenic |
| ATATTCATCACTGTAGGAAT+TGG | 0.280413 | tig0014543:+453196 | Msa1354700:CDS |
| TCGTTTGATGAGAAATAAAA+AGG | 0.282633 | tig0014543:-454043 | None:intergenic |
| AGCTCTTCTATTCTGGTTCA+TGG | 0.287942 | tig0014543:+453064 | Msa1354700:CDS |
| CTATTCTTAGCATGCTATTA+GGG | 0.301257 | tig0014543:+454092 | Msa1354700:CDS |
| TATTCGTCCATAGGTCAAAT+TGG | 0.303171 | tig0014543:+454160 | Msa1354700:CDS |
| GCATACGTTTCATGCTTGTT+TGG | 0.326865 | tig0014543:-454132 | None:intergenic |
| TTCTGGTTCATGGTTTCTCT+TGG | 0.336946 | tig0014543:+453074 | Msa1354700:CDS |
| GGCTAAAGAGAGAGCCAAAA+AGG | 0.344421 | tig0014543:-454358 | None:intergenic |
| TTATGCTCCTATCTACTATC+TGG | 0.367530 | tig0014543:+452977 | Msa1354700:CDS |
| CATACGTTTCATGCTTGTTT+GGG | 0.369828 | tig0014543:-454131 | None:intergenic |
| GTAATTATTGGAATAATTGT+TGG | 0.373428 | tig0014543:+454187 | Msa1354700:CDS |
| CCCTAGCCCCTTCTCATCAA+TGG | 0.393307 | tig0014543:+453230 | Msa1354700:CDS |
| GTGTTATTTGGTCTACGTAC+TGG | 0.413420 | tig0014543:+454292 | Msa1354700:CDS |
| TATTCATCACTGTAGGAATT+GGG | 0.417349 | tig0014543:+453197 | Msa1354700:CDS |
| TCTTGGCTATATGGTTCGTC+CGG | 0.418558 | tig0014543:+453091 | Msa1354700:CDS |
| TACATATCCAATTTGACCTA+TGG | 0.420081 | tig0014543:-454167 | None:intergenic |
| AGCAAAAGTTCCTAGATTCA+TGG | 0.448640 | tig0014543:-454263 | None:intergenic |
| TTCTATATCTCCATGAATCT+AGG | 0.460861 | tig0014543:+454253 | Msa1354700:CDS |
| CTTGGCTATATGGTTCGTCC+GGG | 0.468938 | tig0014543:+453092 | Msa1354700:CDS |
| TACTATGAAATATTTACTCA+TGG | 0.474204 | tig0014543:+453033 | Msa1354700:CDS |
| GGTATATCCAGATAGTAGAT+AGG | 0.488329 | tig0014543:-452984 | None:intergenic |
| ATAAGCGCAATTGAAATTCC+AGG | 0.496050 | tig0014543:-453175 | None:intergenic |
| TGAAATATTTACTCATGGGT+GGG | 0.506663 | tig0014543:+453038 | Msa1354700:CDS |
| TCCATTGATGAGAAGGGGCT+AGG | 0.510524 | tig0014543:-453231 | None:intergenic |
| ATGCTTGCTTATTCGTCCAT+AGG | 0.517225 | tig0014543:+454151 | Msa1354700:CDS |
| TTGAAGCTCTATCTCTCCCC+CGG | 0.517737 | tig0014543:-453110 | None:intergenic |
| TTTATTTCTCATCAAACGAA+TGG | 0.522523 | tig0014543:+454047 | Msa1354700:CDS |
| ACACAAATGTATAACTCCCC+TGG | 0.530663 | tig0014543:+453157 | Msa1354700:CDS |
| GATAACATTCGAGATTATGC+AGG | 0.531827 | tig0014543:+454319 | Msa1354700:CDS |
| ATGAAATATTTACTCATGGG+TGG | 0.533610 | tig0014543:+453037 | Msa1354700:CDS |
| GAAATATTTACTCATGGGTG+GGG | 0.537789 | tig0014543:+453039 | Msa1354700:CDS |
| CAGGAGTCCATTGATGAGAA+GGG | 0.542754 | tig0014543:-453237 | None:intergenic |
| GAGCTTCAAGAAATAGTGAA+TGG | 0.546870 | tig0014543:+453124 | Msa1354700:CDS |
| ATAATTGTTGGAGACTCAAA+TGG | 0.548093 | tig0014543:+454199 | Msa1354700:CDS |
| TCAGGAGTCCATTGATGAGA+AGG | 0.551074 | tig0014543:-453238 | None:intergenic |
| AGAAAAGCAACGACTGGAGT+CGG | 0.551106 | tig0014543:-453965 | None:intergenic |
| CCATTGATGAGAAGGGGCTA+GGG | 0.552174 | tig0014543:-453230 | None:intergenic |
| TTCATATTAACCGCTACTCT+AGG | 0.552712 | tig0014543:+452890 | Msa1354700:CDS |
| GAAAGATGTACGGTCTAATG+AGG | 0.565206 | tig0014543:+453009 | Msa1354700:CDS |
| TAAGCGCAATTGAAATTCCA+GGG | 0.565360 | tig0014543:-453174 | None:intergenic |
| GGAGAGTCAGAGTCGAAAAG+AGG | 0.572366 | tig0014543:-453944 | None:intergenic |
| TGGCTATATGGTTCGTCCGG+GGG | 0.574450 | tig0014543:+453094 | Msa1354700:CDS |
| ATAGCATGCTAAGAATAGCT+AGG | 0.576533 | tig0014543:-454087 | None:intergenic |
| ACAGAAAGAAAAGCAACGAC+TGG | 0.577795 | tig0014543:-453971 | None:intergenic |
| TTGGCTATATGGTTCGTCCG+GGG | 0.582473 | tig0014543:+453093 | Msa1354700:CDS |
| ACTATGAAATATTTACTCAT+GGG | 0.584827 | tig0014543:+453034 | Msa1354700:CDS |
| GCGCTTATATTCATCACTGT+AGG | 0.594447 | tig0014543:+453190 | Msa1354700:CDS |
| TTGAATGAGAGAAAGAAGTG+AGG | 0.599130 | tig0014543:+453918 | Msa1354700:intron |
| ATATTAACCGCTACTCTAGG+AGG | 0.609728 | tig0014543:+452893 | Msa1354700:CDS |
| GATATACCAAGAAAGATGTA+CGG | 0.625842 | tig0014543:+452999 | Msa1354700:CDS |
| ATTGTTGGAGACTCAAATGG+TGG | 0.626325 | tig0014543:+454202 | Msa1354700:CDS |
| AGGAGTCCATTGATGAGAAG+GGG | 0.632944 | tig0014543:-453236 | None:intergenic |
| AGGAATATCGAAAATTCGAG+TGG | 0.650147 | tig0014543:-454023 | None:intergenic |
| AAACATTCCTCCTAGAGTAG+CGG | 0.663526 | tig0014543:-452900 | None:intergenic |
| AAGCGCAATTGAAATTCCAG+GGG | 0.720091 | tig0014543:-453173 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | tig0014543:453394-453413 | Msa1354700:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | tig0014543:453707-453726 | Msa1354700:intron | 15.0% |
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | tig0014543:453394-453413 | Msa1354700:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | tig0014543:453707-453726 | Msa1354700:intron | 15.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | tig0014543:453033-453052 | Msa1354700:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | tig0014543:453034-453053 | Msa1354700:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | tig0014543:453463-453482 | Msa1354700:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | tig0014543:453784-453803 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | tig0014543:453784-453803 | Msa1354700:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | tig0014543:454175-454194 | Msa1354700:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | tig0014543:454187-454206 | Msa1354700:CDS | 20.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | tig0014543:453033-453052 | Msa1354700:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | tig0014543:453034-453053 | Msa1354700:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | tig0014543:453463-453482 | Msa1354700:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | tig0014543:453784-453803 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | tig0014543:453784-453803 | Msa1354700:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | tig0014543:454175-454194 | Msa1354700:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | tig0014543:454187-454206 | Msa1354700:CDS | 20.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | tig0014543:453323-453342 | Msa1354700:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | tig0014543:453382-453401 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | tig0014543:453464-453483 | Msa1354700:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | tig0014543:453495-453514 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | tig0014543:453523-453542 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | tig0014543:453790-453809 | Msa1354700:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | - | tig0014543:453859-453878 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | + | tig0014543:453863-453882 | Msa1354700:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | tig0014543:454046-454065 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | tig0014543:454047-454066 | Msa1354700:CDS | 25.0% |
| !! | TATACACAAAAGATCCTTTT+TGG | + | tig0014543:454344-454363 | Msa1354700:CDS | 25.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | tig0014543:453323-453342 | Msa1354700:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | tig0014543:453382-453401 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | tig0014543:453464-453483 | Msa1354700:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | tig0014543:453495-453514 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | tig0014543:453523-453542 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | tig0014543:453790-453809 | Msa1354700:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | - | tig0014543:453859-453878 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | + | tig0014543:453863-453882 | Msa1354700:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | tig0014543:454046-454065 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | tig0014543:454047-454066 | Msa1354700:CDS | 25.0% |
| !! | TATACACAAAAGATCCTTTT+TGG | + | tig0014543:454344-454363 | Msa1354700:CDS | 25.0% |
| GATATACCAAGAAAGATGTA+CGG | + | tig0014543:452999-453018 | Msa1354700:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | tig0014543:453037-453056 | Msa1354700:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | tig0014543:453038-453057 | Msa1354700:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | tig0014543:453196-453215 | Msa1354700:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | tig0014543:453197-453216 | Msa1354700:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | tig0014543:453304-453323 | Msa1354700:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | tig0014543:453569-453588 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | tig0014543:453569-453588 | Msa1354700:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | tig0014543:453669-453688 | Msa1354700:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | tig0014543:454092-454111 | Msa1354700:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | tig0014543:454170-454189 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | tig0014543:454199-454218 | Msa1354700:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | tig0014543:454253-454272 | Msa1354700:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | tig0014543:454280-454299 | Msa1354700:CDS | 30.0% |
| GATATACCAAGAAAGATGTA+CGG | + | tig0014543:452999-453018 | Msa1354700:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | tig0014543:453037-453056 | Msa1354700:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | tig0014543:453038-453057 | Msa1354700:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | tig0014543:453196-453215 | Msa1354700:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | tig0014543:453197-453216 | Msa1354700:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | tig0014543:453304-453323 | Msa1354700:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | tig0014543:453569-453588 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | tig0014543:453569-453588 | Msa1354700:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | tig0014543:453669-453688 | Msa1354700:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | tig0014543:454092-454111 | Msa1354700:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | tig0014543:454170-454189 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | tig0014543:454199-454218 | Msa1354700:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | tig0014543:454253-454272 | Msa1354700:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | tig0014543:454280-454299 | Msa1354700:CDS | 30.0% |
| TTCATATTAACCGCTACTCT+AGG | + | tig0014543:452890-452909 | Msa1354700:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | tig0014543:452977-452996 | Msa1354700:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | tig0014543:452987-453006 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | tig0014543:453008-453027 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | tig0014543:453039-453058 | Msa1354700:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | tig0014543:453124-453143 | Msa1354700:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | tig0014543:453177-453196 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | tig0014543:453178-453197 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | tig0014543:453298-453317 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | tig0014543:453302-453321 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | tig0014543:453436-453455 | Msa1354700:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | tig0014543:453446-453465 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | tig0014543:453471-453490 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | tig0014543:453536-453555 | Msa1354700:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | tig0014543:453641-453660 | Msa1354700:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | tig0014543:453677-453696 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | tig0014543:453678-453697 | Msa1354700:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | tig0014543:453697-453716 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | tig0014543:453918-453937 | Msa1354700:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | tig0014543:454026-454045 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | tig0014543:454090-454109 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | tig0014543:454091-454110 | Msa1354700:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | tig0014543:454134-454153 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | tig0014543:454160-454179 | Msa1354700:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | tig0014543:454266-454285 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | tig0014543:454319-454338 | Msa1354700:CDS | 35.0% | |
| TTCATATTAACCGCTACTCT+AGG | + | tig0014543:452890-452909 | Msa1354700:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | tig0014543:452977-452996 | Msa1354700:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | tig0014543:452987-453006 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | tig0014543:453008-453027 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | tig0014543:453039-453058 | Msa1354700:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | tig0014543:453124-453143 | Msa1354700:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | tig0014543:453177-453196 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | tig0014543:453178-453197 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | tig0014543:453298-453317 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | tig0014543:453302-453321 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | tig0014543:453436-453455 | Msa1354700:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | tig0014543:453446-453465 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | tig0014543:453471-453490 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | tig0014543:453536-453555 | Msa1354700:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | tig0014543:453641-453660 | Msa1354700:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | tig0014543:453677-453696 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | tig0014543:453678-453697 | Msa1354700:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | tig0014543:453697-453716 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | tig0014543:453918-453937 | Msa1354700:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | tig0014543:454026-454045 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | tig0014543:454090-454109 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | tig0014543:454091-454110 | Msa1354700:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | tig0014543:454134-454153 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | tig0014543:454160-454179 | Msa1354700:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | tig0014543:454266-454285 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | tig0014543:454319-454338 | Msa1354700:CDS | 35.0% | |
| ATATTAACCGCTACTCTAGG+AGG | + | tig0014543:452893-452912 | Msa1354700:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | tig0014543:452903-452922 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | tig0014543:453009-453028 | Msa1354700:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | tig0014543:453064-453083 | Msa1354700:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | tig0014543:453074-453093 | Msa1354700:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | tig0014543:453082-453101 | Msa1354700:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | tig0014543:453157-453176 | Msa1354700:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | tig0014543:453176-453195 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | tig0014543:453190-453209 | Msa1354700:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | tig0014543:453409-453428 | Msa1354700:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | tig0014543:453437-453456 | Msa1354700:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | tig0014543:453445-453464 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | tig0014543:453600-453619 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | tig0014543:453618-453637 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | tig0014543:453619-453638 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | tig0014543:453730-453749 | Msa1354700:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | tig0014543:453749-453768 | Msa1354700:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | tig0014543:453755-453774 | Msa1354700:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | tig0014543:453759-453778 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | tig0014543:453974-453993 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | tig0014543:454135-454154 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | tig0014543:454151-454170 | Msa1354700:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | tig0014543:454202-454221 | Msa1354700:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | tig0014543:454292-454311 | Msa1354700:CDS | 40.0% |
| ATATTAACCGCTACTCTAGG+AGG | + | tig0014543:452893-452912 | Msa1354700:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | tig0014543:452903-452922 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | tig0014543:453009-453028 | Msa1354700:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | tig0014543:453064-453083 | Msa1354700:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | tig0014543:453074-453093 | Msa1354700:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | tig0014543:453082-453101 | Msa1354700:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | tig0014543:453157-453176 | Msa1354700:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | tig0014543:453176-453195 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | tig0014543:453190-453209 | Msa1354700:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | tig0014543:453409-453428 | Msa1354700:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | tig0014543:453437-453456 | Msa1354700:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | tig0014543:453445-453464 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | tig0014543:453600-453619 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | tig0014543:453618-453637 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | tig0014543:453619-453638 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | tig0014543:453730-453749 | Msa1354700:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | tig0014543:453749-453768 | Msa1354700:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | tig0014543:453755-453774 | Msa1354700:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | tig0014543:453759-453778 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | tig0014543:453974-453993 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | tig0014543:454135-454154 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | tig0014543:454151-454170 | Msa1354700:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | tig0014543:454202-454221 | Msa1354700:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | tig0014543:454292-454311 | Msa1354700:CDS | 40.0% |
| TCTTGGCTATATGGTTCGTC+CGG | + | tig0014543:453091-453110 | Msa1354700:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | tig0014543:453239-453258 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | tig0014543:453240-453259 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | tig0014543:453241-453260 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | tig0014543:453250-453269 | Msa1354700:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | tig0014543:453257-453276 | Msa1354700:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | tig0014543:453355-453374 | Msa1354700:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | tig0014543:453372-453391 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | tig0014543:453373-453392 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | tig0014543:453424-453443 | Msa1354700:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | tig0014543:453588-453607 | Msa1354700:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | tig0014543:453743-453762 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | tig0014543:453808-453827 | Msa1354700:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | tig0014543:453812-453831 | Msa1354700:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | tig0014543:453891-453910 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | tig0014543:453893-453912 | Msa1354700:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | tig0014543:453968-453987 | None:intergenic | 45.0% | |
| TCTTGGCTATATGGTTCGTC+CGG | + | tig0014543:453091-453110 | Msa1354700:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | tig0014543:453239-453258 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | tig0014543:453240-453259 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | tig0014543:453241-453260 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | tig0014543:453250-453269 | Msa1354700:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | tig0014543:453257-453276 | Msa1354700:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | tig0014543:453355-453374 | Msa1354700:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | tig0014543:453372-453391 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | tig0014543:453373-453392 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | tig0014543:453424-453443 | Msa1354700:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | tig0014543:453588-453607 | Msa1354700:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | tig0014543:453743-453762 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | tig0014543:453808-453827 | Msa1354700:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | tig0014543:453812-453831 | Msa1354700:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | tig0014543:453891-453910 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | tig0014543:453893-453912 | Msa1354700:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | tig0014543:453968-453987 | None:intergenic | 45.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | + | tig0014543:453057-453076 | Msa1354700:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | tig0014543:453092-453111 | Msa1354700:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | tig0014543:453093-453112 | Msa1354700:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | - | tig0014543:453113-453132 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | tig0014543:453233-453252 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | tig0014543:453234-453253 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | tig0014543:453259-453278 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | tig0014543:453689-453708 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | tig0014543:453947-453966 | None:intergenic | 50.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | + | tig0014543:453057-453076 | Msa1354700:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | tig0014543:453092-453111 | Msa1354700:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | tig0014543:453093-453112 | Msa1354700:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | - | tig0014543:453113-453132 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | tig0014543:453233-453252 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | tig0014543:453234-453253 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | tig0014543:453259-453278 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | tig0014543:453689-453708 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | tig0014543:453947-453966 | None:intergenic | 50.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | + | tig0014543:453094-453113 | Msa1354700:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | tig0014543:453230-453249 | Msa1354700:CDS | 55.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | + | tig0014543:453094-453113 | Msa1354700:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | tig0014543:453230-453249 | Msa1354700:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0014543 | gene | 452866 | 454378 | 452866 | ID=Msa1354700;Name=Msa1354700 |
| tig0014543 | mRNA | 452866 | 454378 | 452866 | ID=Msa1354700-mRNA-1;Parent=Msa1354700;Name=Msa1354700-mRNA-1;_AED=0.71;_eAED=1.00;_QI=0|0|0|0.5|1|1|2|0|281 |
| tig0014543 | exon | 452866 | 453261 | 452866 | ID=Msa1354700-mRNA-1:exon:9186;Parent=Msa1354700-mRNA-1 |
| tig0014543 | exon | 453929 | 454378 | 453929 | ID=Msa1354700-mRNA-1:exon:9187;Parent=Msa1354700-mRNA-1 |
| tig0014543 | CDS | 452866 | 453261 | 452866 | ID=Msa1354700-mRNA-1:cds;Parent=Msa1354700-mRNA-1 |
| tig0014543 | CDS | 453929 | 454378 | 453929 | ID=Msa1354700-mRNA-1:cds;Parent=Msa1354700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
