AlfalfaGEDB | Msa1365960

M. sativa cultivar zhongmu-4 / Msa1365960

KEGG: K02992
GO: GO:0000028 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009579 GO:0009987 GO:0010467 GO:0016020 GO:0016043 GO:0019538 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042254 GO:0042255 GO:0042274 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF00177.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1365960	YP_009141653.1	100.000	131	0	0	1	131	25	155	1.21e-90	269

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1365960	sp\|P07135\|RR7_SOYBN	96.947	131	4	0	1	131	25	155	1.13e-90	262

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1365960	A0A0F6NLW0	100.000	131	0	0	1	131	25	155	5.78e-91	269

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0095190	Msa1365960	0.807907	4.018859e-50	-8.615850e-47
Msa1354380	Msa1365960	0.811581	6.517843e-51	-8.615850e-47
Msa1354420	Msa1365960	0.863577	2.253958e-64	-8.615850e-47
Msa1354430	Msa1365960	0.823193	1.580452e-53	-8.615850e-47
Msa1354480	Msa1365960	0.856952	2.272065e-62	-8.615850e-47
Msa1354490	Msa1365960	0.908565	1.487123e-81	-8.615850e-47
Msa1354500	Msa1365960	0.835275	1.844537e-56	-8.615850e-47
Msa1354550	Msa1365960	0.879870	8.754510e-70	-8.615850e-47
Msa1354560	Msa1365960	0.811769	5.930842e-51	-8.615850e-47
Msa1354610	Msa1365960	0.849133	3.931705e-60	-8.615850e-47
Msa1354620	Msa1365960	0.891183	5.010378e-74	-8.615850e-47
Msa1354630	Msa1365960	0.839184	1.844232e-57	-8.615850e-47
Msa1354680	Msa1365960	0.835173	1.957780e-56	-8.615850e-47
Msa1354690	Msa1365960	0.882710	8.288597e-71	-8.615850e-47
Msa1354700	Msa1365960	0.831524	1.589724e-55	-8.615850e-47
Msa1354740	Msa1365960	0.847190	1.352880e-59	-8.615850e-47
Msa1354750	Msa1365960	0.880557	4.974687e-70	-8.615850e-47
Msa1354760	Msa1365960	0.819140	1.358087e-52	-8.615850e-47
Msa1354810	Msa1365960	0.872745	2.512072e-67	-8.615850e-47
Msa1354820	Msa1365960	0.818092	2.347273e-52	-8.615850e-47
Msa1354900	Msa1365960	0.818380	2.020413e-52	-8.615850e-47
Msa1354910	Msa1365960	0.821704	3.505064e-53	-8.615850e-47
Msa1354930	Msa1365960	0.830750	2.463509e-55	-8.615850e-47
Msa1354980	Msa1365960	0.868085	8.482777e-66	-8.615850e-47
Msa1354990	Msa1365960	0.825077	5.706551e-54	-8.615850e-47
Msa1355070	Msa1365960	0.810094	1.367379e-50	-8.615850e-47
Msa1355080	Msa1365960	0.844424	7.627229e-59	-8.615850e-47
Msa1355100	Msa1365960	0.814947	1.188592e-51	-8.615850e-47
Msa1365890	Msa1365960	0.845095	5.027210e-59	-8.615850e-47
Msa1365900	Msa1365960	0.835413	1.702488e-56	-8.615850e-47
Msa1365950	Msa1365960	0.855221	7.294482e-62	-8.615850e-47
Msa1365960	Msa1365970	0.844714	6.373027e-59	-8.615850e-47
Msa1365960	Msa1366040	0.805460	1.320545e-49	-8.615850e-47
Msa1365960	Msa1366080	0.854367	1.290148e-61	-8.615850e-47
Msa1365960	Msa1366090	0.805927	1.053893e-49	-8.615850e-47
Msa1365960	Msa1368230	0.870901	1.028012e-66	-8.615850e-47
Msa1365960	Msa1368240	0.811048	8.506719e-51	-8.615850e-47
Msa1365960	Msa1368280	0.810020	1.418731e-50	-8.615850e-47
Msa1365960	Msa1368290	0.813908	2.016524e-51	-8.615850e-47
Msa1365960	Msa1380600	0.829106	6.197832e-55	-8.615850e-47
Msa1365960	Msa1380620	0.807538	4.812850e-50	-8.615850e-47
Msa1365960	Msa1385410	0.854639	1.076664e-61	-8.615850e-47
Msa1365960	Msa1385420	0.805989	1.022837e-49	-8.615850e-47
Msa1365960	Msa1391090	0.837193	6.005570e-57	-8.615850e-47
Msa1365960	Msa1391100	0.888591	5.153281e-73	-8.615850e-47
Msa1365960	Msa1391110	0.814552	1.453988e-51	-8.615850e-47
Msa1365960	Msa1391160	0.882312	1.157569e-70	-8.615850e-47
Msa1365960	Msa1391170	0.845558	3.767311e-59	-8.615850e-47
Msa1365960	Msa1391220	0.849420	3.270350e-60	-8.615850e-47
Msa1365960	Msa1391230	0.909933	3.290680e-82	-8.615850e-47
Msa1365960	Msa1391240	0.821680	3.548987e-53	-8.615850e-47
Msa1365960	Msa1394040	0.828875	7.048146e-55	-8.615850e-47
Msa1365960	Msa1394150	0.838074	3.568612e-57	-8.615850e-47
Msa1365960	Msa1394160	0.811147	8.097790e-51	-8.615850e-47
Msa1365960	Msa1394170	0.805836	1.101320e-49	-8.615850e-47
Msa1365960	Msa1394210	0.810085	1.373302e-50	-8.615850e-47
Msa1365960	Msa1394220	0.802170	6.370945e-49	-8.615850e-47
Msa1365960	Msa1460120	0.808543	2.941915e-50	-8.615850e-47
Msa1365960	Msa1460130	0.845795	3.250515e-59	-8.615850e-47
Msa0202640	Msa1365960	0.811080	8.370159e-51	-8.615850e-47
Msa1305090	Msa1365960	0.835324	1.792621e-56	-8.615850e-47
Msa0370210	Msa1365960	0.807533	4.826521e-50	-8.615850e-47
Msa0405420	Msa1365960	0.825761	3.929525e-54	-8.615850e-47
Msa0405430	Msa1365960	0.839140	1.893385e-57	-8.615850e-47
Msa0405510	Msa1365960	0.842309	2.798080e-58	-8.615850e-47
Msa0405520	Msa1365960	0.825877	3.688021e-54	-8.615850e-47
Msa0405530	Msa1365960	0.801315	9.542186e-49	-8.615850e-47
Msa0983630	Msa1365960	0.857876	1.210750e-62	-8.615850e-47
Msa0983640	Msa1365960	0.852784	3.677733e-61	-8.615850e-47
Msa0983720	Msa1365960	0.805107	1.565780e-49	-8.615850e-47
Msa1022050	Msa1365960	0.847288	1.271343e-59	-8.615850e-47
Msa1022060	Msa1365960	0.821762	3.397296e-53	-8.615850e-47
Msa1064410	Msa1365960	0.820101	8.194312e-53	-8.615850e-47
Msa1086080	Msa1365960	0.825139	5.515069e-54	-8.615850e-47
Msa1086100	Msa1365960	0.838205	3.302854e-57	-8.615850e-47
Msa1086140	Msa1365960	0.836454	9.267942e-57	-8.615850e-47
Msa1086190	Msa1365960	0.841901	3.587241e-58	-8.615850e-47
Msa1086210	Msa1365960	0.820897	5.380208e-53	-8.615850e-47
Msa1086250	Msa1365960	0.804947	1.691530e-49	-8.615850e-47
Msa1086260	Msa1365960	0.810474	1.132064e-50	-8.615850e-47
Msa1086270	Msa1365960	0.817971	2.499930e-52	-8.615850e-47
Msa1086380	Msa1365960	0.806925	6.492054e-50	-8.615850e-47
Msa1086450	Msa1365960	0.805093	1.576270e-49	-8.615850e-47
Msa1086470	Msa1365960	0.808806	2.583865e-50	-8.615850e-47
Msa1086550	Msa1365960	0.816828	4.520978e-52	-8.615850e-47
Msa1086560	Msa1365960	0.812382	4.361439e-51	-8.615850e-47
Msa1086590	Msa1365960	0.886053	4.779580e-72	-8.615850e-47
Msa1086600	Msa1365960	0.845987	2.881839e-59	-8.615850e-47
Msa1086720	Msa1365960	0.847773	9.356044e-60	-8.615850e-47
Msa1086730	Msa1365960	0.896800	2.603524e-76	-8.615850e-47
Msa1086740	Msa1365960	0.826623	2.450623e-54	-8.615850e-47
Msa1086790	Msa1365960	0.859784	3.254406e-63	-8.615850e-47
Msa1086800	Msa1365960	0.851534	8.334698e-61	-8.615850e-47
Msa1086890	Msa1365960	0.831016	2.119955e-55	-8.615850e-47
Msa1086910	Msa1365960	0.832330	1.005284e-55	-8.615850e-47
Msa1086960	Msa1365960	0.850171	2.017243e-60	-8.615850e-47
Msa1086970	Msa1365960	0.836938	6.975910e-57	-8.615850e-47
Msa1087030	Msa1365960	0.845103	5.002320e-59	-8.615850e-47
Msa1087040	Msa1365960	0.897528	1.287976e-76	-8.615850e-47
Msa1087050	Msa1365960	0.832357	9.899283e-56	-8.615850e-47
Msa1087110	Msa1365960	0.864295	1.347941e-64	-8.615850e-47
Msa1087120	Msa1365960	0.842943	1.898854e-58	-8.615850e-47
Msa0263770	Msa1365960	0.822512	2.276251e-53	-8.615850e-47
Msa0268170	Msa1365960	0.811550	6.618571e-51	-8.615850e-47
Msa0268250	Msa1365960	0.838636	2.556395e-57	-8.615850e-47
Msa0268260	Msa1365960	0.893790	4.526421e-75	-8.615850e-47
Msa0268270	Msa1365960	0.847701	9.791856e-60	-8.615850e-47
Msa0268300	Msa1365960	0.846928	1.595588e-59	-8.615850e-47
Msa0268310	Msa1365960	0.865646	5.077580e-65	-8.615850e-47
Msa0268390	Msa1365960	0.812538	4.032199e-51	-8.615850e-47
Msa0268400	Msa1365960	0.824371	8.369436e-54	-8.615850e-47
Msa0268410	Msa1365960	0.806812	6.857931e-50	-8.615850e-47
Msa0268550	Msa1365960	0.805866	1.085662e-49	-8.615850e-47
Msa0268560	Msa1365960	0.842721	2.174533e-58	-8.615850e-47
Msa0268580	Msa1365960	0.845094	5.030246e-59	-8.615850e-47
Msa0268630	Msa1365960	0.821571	3.762528e-53	-8.615850e-47
Msa0268640	Msa1365960	0.815977	7.010653e-52	-8.615850e-47
Msa0268740	Msa1365960	0.833523	5.077396e-56	-8.615850e-47
Msa0268760	Msa1365960	0.825463	4.624776e-54	-8.615850e-47
Msa0268830	Msa1365960	0.819880	9.206212e-53	-8.615850e-47
Msa0268840	Msa1365960	0.801416	9.099069e-49	-8.615850e-47
Msa0268940	Msa1365960	0.803253	3.808440e-49	-8.615850e-47
Msa0268950	Msa1365960	0.830106	3.539576e-55	-8.615850e-47
Msa0268960	Msa1365960	0.821076	4.892989e-53	-8.615850e-47
Msa0269040	Msa1365960	0.828492	8.725260e-55	-8.615850e-47
Msa0269050	Msa1365960	0.812280	4.589007e-51	-8.615850e-47
Msa0269130	Msa1365960	0.838365	3.003494e-57	-8.615850e-47
Msa0269140	Msa1365960	0.901674	2.110656e-78	-8.615850e-47
Msa0269150	Msa1365960	0.836458	9.246458e-57	-8.615850e-47
Msa0344180	Msa1365960	0.813310	2.731155e-51	-8.615850e-47
Msa0344190	Msa1365960	0.824103	9.675690e-54	-8.615850e-47
Msa0344310	Msa1365960	0.841120	5.760908e-58	-8.615850e-47
Msa1143120	Msa1365960	0.823292	1.498671e-53	-8.615850e-47
Msa1143160	Msa1365960	0.825155	5.469481e-54	-8.615850e-47
Msa1143180	Msa1365960	0.820789	5.696642e-53	-8.615850e-47
Msa0582510	Msa1365960	0.823283	1.505643e-53	-8.615850e-47
Msa0582630	Msa1365960	0.805782	1.130434e-49	-8.615850e-47
Msa0582640	Msa1365960	0.842420	2.613941e-58	-8.615850e-47
Msa0582660	Msa1365960	0.830162	3.429899e-55	-8.615850e-47
Msa0582690	Msa1365960	0.819466	1.144391e-52	-8.615850e-47
Msa0582700	Msa1365960	0.803193	3.918892e-49	-8.615850e-47
Msa0582750	Msa1365960	0.800052	1.727127e-48	-8.615850e-47
Msa0582760	Msa1365960	0.833971	3.923774e-56	-8.615850e-47
Msa0582780	Msa1365960	0.827275	1.712078e-54	-8.615850e-47
Msa0582810	Msa1365960	0.825799	3.849688e-54	-8.615850e-47
Msa0582910	Msa1365960	0.832390	9.717599e-56	-8.615850e-47
Msa0582930	Msa1365960	0.841756	3.918311e-58	-8.615850e-47
Msa0591290	Msa1365960	0.815821	7.595440e-52	-8.615850e-47
Msa0591310	Msa1365960	0.841318	5.108973e-58	-8.615850e-47
Msa0591350	Msa1365960	0.856445	3.201707e-62	-8.615850e-47
Msa0591360	Msa1365960	0.824333	8.546012e-54	-8.615850e-47
Msa0591370	Msa1365960	0.822741	2.013566e-53	-8.615850e-47
Msa0591380	Msa1365960	0.824444	8.043505e-54	-8.615850e-47
Msa0867680	Msa1365960	0.855100	7.912348e-62	-8.615850e-47
Msa0867690	Msa1365960	0.823273	1.514021e-53	-8.615850e-47
Msa0908220	Msa1365960	0.839933	1.177711e-57	-8.615850e-47
Msa0908230	Msa1365960	0.877625	5.409184e-69	-8.615850e-47
Msa0908240	Msa1365960	0.818286	2.121937e-52	-8.615850e-47
Msa0908310	Msa1365960	0.856946	2.279976e-62	-8.615850e-47
Msa0908320	Msa1365960	0.834869	2.334715e-56	-8.615850e-47
Msa0908370	Msa1365960	0.876821	1.029070e-68	-8.615850e-47
Msa0908380	Msa1365960	0.801127	1.042639e-48	-8.615850e-47
Msa0908440	Msa1365960	0.886809	2.475410e-72	-8.615850e-47
Msa0908450	Msa1365960	0.836297	1.016212e-56	-8.615850e-47
Msa0908530	Msa1365960	0.873567	1.330546e-67	-8.615850e-47
Msa0908540	Msa1365960	0.831505	1.606892e-55	-8.615850e-47
Msa0908590	Msa1365960	0.827776	1.297732e-54	-8.615850e-47
Msa0908600	Msa1365960	0.881540	2.205992e-70	-8.615850e-47
Msa0908650	Msa1365960	0.839342	1.677754e-57	-8.615850e-47
Msa0908660	Msa1365960	0.878504	2.661256e-69	-8.615850e-47
Msa0908670	Msa1365960	0.843268	1.555210e-58	-8.615850e-47
Msa0908720	Msa1365960	0.853757	1.934809e-61	-8.615850e-47
Msa0908730	Msa1365960	0.819628	1.051082e-52	-8.615850e-47
Msa0911200	Msa1365960	0.823302	1.490241e-53	-8.615850e-47
Msa0924870	Msa1365960	0.826675	2.381282e-54	-8.615850e-47
Msa0924890	Msa1365960	0.837671	4.530933e-57	-8.615850e-47
Msa0924930	Msa1365960	0.903878	2.200087e-79	-8.615850e-47
Msa0924940	Msa1365960	0.835829	1.335833e-56	-8.615850e-47
Msa0925100	Msa1365960	0.835014	2.146327e-56	-8.615850e-47
Msa0925110	Msa1365960	0.828986	6.625726e-55	-8.615850e-47
Msa0931070	Msa1365960	0.831351	1.754006e-55	-8.615850e-47
Msa0931080	Msa1365960	0.813551	2.417181e-51	-8.615850e-47
Msa0931130	Msa1365960	0.831220	1.888355e-55	-8.615850e-47
Msa0931140	Msa1365960	0.805773	1.135288e-49	-8.615850e-47
Msa0931220	Msa1365960	0.844092	9.363245e-59	-8.615850e-47
Msa0931240	Msa1365960	0.829219	5.819221e-55	-8.615850e-47
Msa0931260	Msa1365960	0.835694	1.445644e-56	-8.615850e-47
Msa0931270	Msa1365960	0.801000	1.106965e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1365960	MtrunA17_CPg0492421	91.729	133	9	1	1	131	25	157	1.30e-85	246
Msa1365960	MtrunA17_Chr4g0016101	91.729	133	9	1	1	131	25	157	1.30e-85	246
Msa1365960	MtrunA17_Chr3g0090841	91.729	133	9	1	1	131	25	157	1.30e-85	246
Msa1365960	MtrunA17_Chr4g0002541	83.333	60	10	0	1	60	1	60	3.60e-30	103
Msa1365960	MtrunA17_Chr4g0057401	87.500	40	5	0	92	131	1	40	1.06e-17	71.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1365960	ATCG00900.1	95.420	131	6	0	1	131	25	155	7.02e-91	260
Msa1365960	ATCG01240.1	95.420	131	6	0	1	131	25	155	7.02e-91	260
Msa1365960	ATMG01270.1	33.824	136	80	3	2	131	15	146	3.86e-18	75.5
Msa1365960	AT2G07696.1	33.824	136	80	3	2	131	15	146	3.86e-18	75.5

Find 25 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGCCATTCGTTGGTTATT+AGG	0.268444	tig0018442:-50485	Msa1365960:CDS
CATCAAGTTCCCGTTGAAAT+AGG	0.307921	tig0018442:-50527	Msa1365960:CDS
AAAACGTCCAGGTCGAAATA+TGG	0.317789	tig0018442:-50453	Msa1365960:CDS
CAAATTAAGTTCCGAATTAG+TGG	0.342047	tig0018442:-50426	Msa1365960:CDS
TGGCGATGCCATACGCAAAA+AGG	0.366109	tig0018442:-50387	Msa1365960:CDS
TTTGGCAGCATCCACTAATT+CGG	0.404543	tig0018442:+50415	None:intergenic
ACGTATTGCTTGACGTAAAA+CGG	0.405511	tig0018442:+50601	None:intergenic
GCTTGACGTAAAACGGATAG+TGG	0.418362	tig0018442:+50608	None:intergenic
GTAAAAGCAAGACGCGTAAA+CGG	0.427761	tig0018442:-50557	Msa1365960:CDS
TATGGCATCGCCATTCCCTT+TGG	0.436234	tig0018442:+50397	None:intergenic
TGTGTGGATCCTATTTCAAC+GGG	0.470768	tig0018442:+50518	None:intergenic
TTATCTATCGAGCTATGAAA+AGG	0.512086	tig0018442:-50655	Msa1365960:CDS
GAAAAGCACTTGCCATTCGT+TGG	0.526859	tig0018442:-50493	Msa1365960:CDS
GTGGATGCTGCCAAAGGGAA+TGG	0.532446	tig0018442:-50407	Msa1365960:CDS
GGCGCATCCCGAAAACGTCC+AGG	0.540732	tig0018442:-50464	Msa1365960:CDS
AAAGGAAGAGACTCATAGAA+TGG	0.548096	tig0018442:-50369	Msa1365960:CDS
TTGTGTGGATCCTATTTCAA+CGG	0.548545	tig0018442:+50517	None:intergenic
AATTAGTGGATGCTGCCAAA+GGG	0.575951	tig0018442:-50412	Msa1365960:CDS
GAATTAGTGGATGCTGCCAA+AGG	0.584526	tig0018442:-50413	Msa1365960:CDS
AGAGACTCATAGAATGGCAG+AGG	0.593635	tig0018442:-50363	Msa1365960:CDS
TTGAAAGCCATATTTCGACC+TGG	0.605724	tig0018442:+50446	None:intergenic
TGCGCCTAATAACCAACGAA+TGG	0.620213	tig0018442:+50481	None:intergenic
GTTAACCGTATTATGAAACA+CGG	0.650772	tig0018442:-50701	Msa1365960:CDS
TTTACGTCAAGCAATACGTG+GGG	0.715577	tig0018442:-50597	Msa1365960:CDS
GTTGAAATAGGATCCACACA+AGG	0.731975	tig0018442:-50515	Msa1365960:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTTTCCGTGTTTCATAATA+CGG	+	tig0018442:50348-50367	None:intergenic	25.0%
	GTTAACCGTATTATGAAACA+CGG	-	tig0018442:50340-50359	Msa1365960:CDS	30.0%
	GAAACACGGAAAAAAATCAT+TGG	-	tig0018442:50354-50373	Msa1365960:CDS	30.0%
	TTATCTATCGAGCTATGAAA+AGG	-	tig0018442:50386-50405	Msa1365960:CDS	30.0%
!!	TCTTGCTTTTACTGCTATAT+CGG	+	tig0018442:50476-50495	None:intergenic	30.0%
	CAAATTAAGTTCCGAATTAG+TGG	-	tig0018442:50615-50634	Msa1365960:CDS	30.0%
	ACGTATTGCTTGACGTAAAA+CGG	+	tig0018442:50443-50462	None:intergenic	35.0%
!	TTTTACGTCAAGCAATACGT+GGG	-	tig0018442:50443-50462	Msa1365960:CDS	35.0%
!!	CTTGCTTTTACTGCTATATC+GGG	+	tig0018442:50475-50494	None:intergenic	35.0%
	TTGTGTGGATCCTATTTCAA+CGG	+	tig0018442:50527-50546	None:intergenic	35.0%
	AAAGGAAGAGACTCATAGAA+TGG	-	tig0018442:50672-50691	Msa1365960:CDS	35.0%
!	GTTTTACGTCAAGCAATACG+TGG	-	tig0018442:50442-50461	Msa1365960:CDS	40.0%
	TTTACGTCAAGCAATACGTG+GGG	-	tig0018442:50444-50463	Msa1365960:CDS	40.0%
	GTAAAAGCAAGACGCGTAAA+CGG	-	tig0018442:50484-50503	Msa1365960:CDS	40.0%
	CATCAAGTTCCCGTTGAAAT+AGG	-	tig0018442:50514-50533	Msa1365960:CDS	40.0%
	TGTGTGGATCCTATTTCAAC+GGG	+	tig0018442:50526-50545	None:intergenic	40.0%
	GTTGAAATAGGATCCACACA+AGG	-	tig0018442:50526-50545	Msa1365960:CDS	40.0%
!	CTTGCCATTCGTTGGTTATT+AGG	-	tig0018442:50556-50575	Msa1365960:CDS	40.0%
!	TATTTCGACCTGGACGTTTT+CGG	+	tig0018442:50588-50607	None:intergenic	40.0%
	AAAACGTCCAGGTCGAAATA+TGG	-	tig0018442:50588-50607	Msa1365960:CDS	40.0%
	TTGAAAGCCATATTTCGACC+TGG	+	tig0018442:50598-50617	None:intergenic	40.0%
	TTTGGCAGCATCCACTAATT+CGG	+	tig0018442:50629-50648	None:intergenic	40.0%
!	AATTAGTGGATGCTGCCAAA+GGG	-	tig0018442:50629-50648	Msa1365960:CDS	40.0%
!	AGTCTCTTCCTTTTTGCGTA+TGG	+	tig0018442:50665-50684	None:intergenic	40.0%
	GCTTGACGTAAAACGGATAG+TGG	+	tig0018442:50436-50455	None:intergenic	45.0%
!!	GAAAAGCACTTGCCATTCGT+TGG	-	tig0018442:50548-50567	Msa1365960:CDS	45.0%
	TGCGCCTAATAACCAACGAA+TGG	+	tig0018442:50563-50582	None:intergenic	45.0%
!	ATTTCGACCTGGACGTTTTC+GGG	+	tig0018442:50587-50606	None:intergenic	45.0%
!	GAATTAGTGGATGCTGCCAA+AGG	-	tig0018442:50628-50647	Msa1365960:CDS	45.0%
	AGAGACTCATAGAATGGCAG+AGG	-	tig0018442:50678-50697	Msa1365960:CDS	45.0%
!	GGCAAGTGCTTTTCCTTGTG+TGG	+	tig0018442:50542-50561	None:intergenic	50.0%
	TATGGCATCGCCATTCCCTT+TGG	+	tig0018442:50647-50666	None:intergenic	50.0%
	TGGCGATGCCATACGCAAAA+AGG	-	tig0018442:50654-50673	Msa1365960:CDS	50.0%
	GTGGATGCTGCCAAAGGGAA+TGG	-	tig0018442:50634-50653	Msa1365960:CDS	55.0%
	GGCGCATCCCGAAAACGTCC+AGG	-	tig0018442:50577-50596	Msa1365960:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0018442	gene	50334	50729	50334	ID=Msa1365960;Name=Msa1365960
tig0018442	mRNA	50334	50729	50334	ID=Msa1365960-mRNA-1;Parent=Msa1365960;Name=Msa1365960-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|131
tig0018442	exon	50334	50729	50334	ID=Msa1365960-mRNA-1:exon:14880;Parent=Msa1365960-mRNA-1
tig0018442	CDS	50334	50729	50334	ID=Msa1365960-mRNA-1:cds;Parent=Msa1365960-mRNA-1

Gene Sequence

>Msa1365960

ATGTTGGTTAACCGTATTATGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCTATGAAAAGGATTCAACAAAAGACAGAAACAAATCCACTATCCGTTTTACGTCAAGCAATACGTGGGGTAACTCCCGATATAGCAGTAAAAGCAAGACGCGTAAACGGATCGACTCATCAAGTTCCCGTTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGCGCATCCCGAAAACGTCCAGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAATGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Protein sequence

>Msa1365960

MLVNRIMKHGKKSLAYQIIYRAMKRIQQKTETNPLSVLRQAIRGVTPDIAVKARRVNGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGNGDAIRKKEETHRMAEANRAFAHFR*