Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354560 | QJQ79495.1 | 84.043 | 282 | 4 | 2 | 1 | 241 | 106 | 387 | 4.42e-145 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354560 | sp|P0CC61|NU2C2_EUCGG | 81.588 | 277 | 8 | 2 | 1 | 241 | 124 | 393 | 3.68e-137 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354560 | A0A059TEW3 | 81.588 | 277 | 8 | 2 | 1 | 241 | 1 | 270 | 2.15e-149 | 431 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095150 | Msa1354560 | 0.829726 | 4.381288e-55 | -8.615850e-47 |
| Msa0095230 | Msa1354560 | 0.800966 | 1.124433e-48 | -8.615850e-47 |
| Msa0095280 | Msa1354560 | 0.815751 | 7.871783e-52 | -8.615850e-47 |
| Msa1354420 | Msa1354560 | 0.850533 | 1.596813e-60 | -8.615850e-47 |
| Msa1354430 | Msa1354560 | 0.919248 | 5.704741e-87 | -8.615850e-47 |
| Msa1354480 | Msa1354560 | 0.864565 | 1.110110e-64 | -8.615850e-47 |
| Msa1354490 | Msa1354560 | 0.855089 | 7.968454e-62 | -8.615850e-47 |
| Msa1354500 | Msa1354560 | 0.850808 | 1.336549e-60 | -8.615850e-47 |
| Msa1354550 | Msa1354560 | 0.860562 | 1.894297e-63 | -8.615850e-47 |
| Msa1354560 | Msa1354610 | 0.889136 | 3.172821e-73 | -8.615850e-47 |
| Msa1354560 | Msa1354620 | 0.854898 | 9.054901e-62 | -8.615850e-47 |
| Msa1354560 | Msa1354630 | 0.857954 | 1.147949e-62 | -8.615850e-47 |
| Msa1354560 | Msa1354680 | 0.840013 | 1.122746e-57 | -8.615850e-47 |
| Msa1354560 | Msa1354690 | 0.831926 | 1.265074e-55 | -8.615850e-47 |
| Msa1354560 | Msa1354700 | 0.922345 | 1.109305e-88 | -8.615850e-47 |
| Msa1354560 | Msa1354740 | 0.877616 | 5.449118e-69 | -8.615850e-47 |
| Msa1354560 | Msa1354750 | 0.846615 | 1.942877e-59 | -8.615850e-47 |
| Msa1354560 | Msa1354760 | 0.843816 | 1.110327e-58 | -8.615850e-47 |
| Msa1354560 | Msa1354810 | 0.849874 | 2.443502e-60 | -8.615850e-47 |
| Msa1354560 | Msa1354820 | 0.906551 | 1.314753e-80 | -8.615850e-47 |
| Msa1354560 | Msa1354860 | 0.804707 | 1.898020e-49 | -8.615850e-47 |
| Msa1354560 | Msa1354920 | 0.843002 | 1.831379e-58 | -8.615850e-47 |
| Msa1354560 | Msa1354980 | 0.858190 | 9.762259e-63 | -8.615850e-47 |
| Msa1354560 | Msa1354990 | 0.907398 | 5.291052e-81 | -8.615850e-47 |
| Msa1354560 | Msa1355030 | 0.811267 | 7.626453e-51 | -8.615850e-47 |
| Msa1354560 | Msa1355080 | 0.804027 | 2.631220e-49 | -8.615850e-47 |
| Msa1354560 | Msa1355090 | 0.831157 | 1.956675e-55 | -8.615850e-47 |
| Msa1354560 | Msa1365890 | 0.842550 | 2.414352e-58 | -8.615850e-47 |
| Msa1354560 | Msa1365900 | 0.863344 | 2.661807e-64 | -8.615850e-47 |
| Msa1354560 | Msa1365950 | 0.866466 | 2.793100e-65 | -8.615850e-47 |
| Msa1354560 | Msa1365960 | 0.811769 | 5.930842e-51 | -8.615850e-47 |
| Msa1354560 | Msa1365970 | 0.840681 | 7.509005e-58 | -8.615850e-47 |
| Msa1354560 | Msa1366080 | 0.855803 | 4.935427e-62 | -8.615850e-47 |
| Msa1354560 | Msa1366090 | 0.857998 | 1.113972e-62 | -8.615850e-47 |
| Msa1354560 | Msa1368230 | 0.831311 | 1.794005e-55 | -8.615850e-47 |
| Msa1354560 | Msa1368240 | 0.821092 | 4.852655e-53 | -8.615850e-47 |
| Msa1354560 | Msa1380610 | 0.831771 | 1.382260e-55 | -8.615850e-47 |
| Msa1354560 | Msa1385410 | 0.838768 | 2.363950e-57 | -8.615850e-47 |
| Msa1354560 | Msa1385420 | 0.868314 | 7.158446e-66 | -8.615850e-47 |
| Msa1354560 | Msa1391090 | 0.856234 | 3.692524e-62 | -8.615850e-47 |
| Msa1354560 | Msa1391100 | 0.827562 | 1.460784e-54 | -8.615850e-47 |
| Msa1354560 | Msa1391110 | 0.837212 | 5.938418e-57 | -8.615850e-47 |
| Msa1354560 | Msa1391160 | 0.828249 | 9.984992e-55 | -8.615850e-47 |
| Msa1354560 | Msa1391170 | 0.858371 | 8.622786e-63 | -8.615850e-47 |
| Msa1354560 | Msa1391220 | 0.884296 | 2.164766e-71 | -8.615850e-47 |
| Msa1354560 | Msa1391230 | 0.838646 | 2.541294e-57 | -8.615850e-47 |
| Msa1354560 | Msa1391240 | 0.835022 | 2.137566e-56 | -8.615850e-47 |
| Msa1354560 | Msa1394030 | 0.833067 | 6.598903e-56 | -8.615850e-47 |
| Msa1354560 | Msa1394040 | 0.814683 | 1.360078e-51 | -8.615850e-47 |
| Msa1354560 | Msa1394080 | 0.804150 | 2.480583e-49 | -8.615850e-47 |
| Msa1354560 | Msa1394110 | 0.803121 | 4.055354e-49 | -8.615850e-47 |
| Msa1354560 | Msa1394150 | 0.806372 | 8.492721e-50 | -8.615850e-47 |
| Msa1354560 | Msa1394160 | 0.828402 | 9.172611e-55 | -8.615850e-47 |
| Msa1354560 | Msa1394210 | 0.818852 | 1.579082e-52 | -8.615850e-47 |
| Msa1354560 | Msa1394250 | 0.821568 | 3.767617e-53 | -8.615850e-47 |
| Msa1354560 | Msa1394270 | 0.824347 | 8.480095e-54 | -8.615850e-47 |
| Msa1354560 | Msa1460120 | 0.837009 | 6.694042e-57 | -8.615850e-47 |
| Msa1354560 | Msa1460130 | 0.843383 | 1.449472e-58 | -8.615850e-47 |
| Msa0173880 | Msa1354560 | 0.808873 | 2.499960e-50 | -8.615850e-47 |
| Msa0202640 | Msa1354560 | 0.831776 | 1.377666e-55 | -8.615850e-47 |
| Msa0221840 | Msa1354560 | 0.813681 | 2.262961e-51 | -8.615850e-47 |
| Msa1305090 | Msa1354560 | 0.814377 | 1.589611e-51 | -8.615850e-47 |
| Msa1333220 | Msa1354560 | 0.808320 | 3.281082e-50 | -8.615850e-47 |
| Msa0405420 | Msa1354560 | 0.861053 | 1.344272e-63 | -8.615850e-47 |
| Msa0405430 | Msa1354560 | 0.814619 | 1.404672e-51 | -8.615850e-47 |
| Msa0405440 | Msa1354560 | 0.834574 | 2.770535e-56 | -8.615850e-47 |
| Msa0405510 | Msa1354560 | 0.877157 | 7.867946e-69 | -8.615850e-47 |
| Msa0405520 | Msa1354560 | 0.810594 | 1.066386e-50 | -8.615850e-47 |
| Msa0405530 | Msa1354560 | 0.855030 | 8.289803e-62 | -8.615850e-47 |
| Msa0459400 | Msa1354560 | 0.801987 | 6.947669e-49 | -8.615850e-47 |
| Msa0983630 | Msa1354560 | 0.854156 | 1.484365e-61 | -8.615850e-47 |
| Msa0983640 | Msa1354560 | 0.855466 | 6.191445e-62 | -8.615850e-47 |
| Msa0983680 | Msa1354560 | 0.814833 | 1.259911e-51 | -8.615850e-47 |
| Msa1022050 | Msa1354560 | 0.849749 | 2.648394e-60 | -8.615850e-47 |
| Msa1022060 | Msa1354560 | 0.890364 | 1.053762e-73 | -8.615850e-47 |
| Msa1064410 | Msa1354560 | 0.824465 | 7.956046e-54 | -8.615850e-47 |
| Msa1086080 | Msa1354560 | 0.810306 | 1.230541e-50 | -8.615850e-47 |
| Msa1086090 | Msa1354560 | 0.843850 | 1.087002e-58 | -8.615850e-47 |
| Msa1086140 | Msa1354560 | 0.824749 | 6.817874e-54 | -8.615850e-47 |
| Msa1086200 | Msa1354560 | 0.851130 | 1.084210e-60 | -8.615850e-47 |
| Msa1086270 | Msa1354560 | 0.834872 | 2.331057e-56 | -8.615850e-47 |
| Msa1086300 | Msa1354560 | 0.810402 | 1.173552e-50 | -8.615850e-47 |
| Msa1086320 | Msa1354560 | 0.816669 | 4.907885e-52 | -8.615850e-47 |
| Msa1086350 | Msa1354560 | 0.816065 | 6.701017e-52 | -8.615850e-47 |
| Msa1086360 | Msa1354560 | 0.804222 | 2.395935e-49 | -8.615850e-47 |
| Msa1086420 | Msa1354560 | 0.815770 | 7.795762e-52 | -8.615850e-47 |
| Msa1086430 | Msa1354560 | 0.801367 | 9.309475e-49 | -8.615850e-47 |
| Msa1086490 | Msa1354560 | 0.802324 | 5.921231e-49 | -8.615850e-47 |
| Msa1086510 | Msa1354560 | 0.822613 | 2.156589e-53 | -8.615850e-47 |
| Msa1086550 | Msa1354560 | 0.886979 | 2.133184e-72 | -8.615850e-47 |
| Msa1086590 | Msa1354560 | 0.820525 | 6.551971e-53 | -8.615850e-47 |
| Msa1086600 | Msa1354560 | 0.899709 | 1.514312e-77 | -8.615850e-47 |
| Msa1086640 | Msa1354560 | 0.804807 | 1.809207e-49 | -8.615850e-47 |
| Msa1086660 | Msa1354560 | 0.801423 | 9.068865e-49 | -8.615850e-47 |
| Msa1086670 | Msa1354560 | 0.811757 | 5.968028e-51 | -8.615850e-47 |
| Msa1086680 | Msa1354560 | 0.802078 | 6.655384e-49 | -8.615850e-47 |
| Msa1086720 | Msa1354560 | 0.891176 | 5.043999e-74 | -8.615850e-47 |
| Msa1086730 | Msa1354560 | 0.839911 | 1.193236e-57 | -8.615850e-47 |
| Msa1086740 | Msa1354560 | 0.842483 | 2.514976e-58 | -8.615850e-47 |
| Msa1086790 | Msa1354560 | 0.853579 | 2.176332e-61 | -8.615850e-47 |
| Msa1086800 | Msa1354560 | 0.895531 | 8.776889e-76 | -8.615850e-47 |
| Msa1086840 | Msa1354560 | 0.810832 | 9.473491e-51 | -8.615850e-47 |
| Msa1086860 | Msa1354560 | 0.806592 | 7.633760e-50 | -8.615850e-47 |
| Msa1086890 | Msa1354560 | 0.813179 | 2.918051e-51 | -8.615850e-47 |
| Msa1086900 | Msa1354560 | 0.854047 | 1.596803e-61 | -8.615850e-47 |
| Msa1086960 | Msa1354560 | 0.879022 | 1.748513e-69 | -8.615850e-47 |
| Msa1086970 | Msa1354560 | 0.882223 | 1.247294e-70 | -8.615850e-47 |
| Msa1087030 | Msa1354560 | 0.881194 | 2.939425e-70 | -8.615850e-47 |
| Msa1087040 | Msa1354560 | 0.848500 | 5.890877e-60 | -8.615850e-47 |
| Msa1087050 | Msa1354560 | 0.833405 | 5.436472e-56 | -8.615850e-47 |
| Msa1087110 | Msa1354560 | 0.866560 | 2.607804e-65 | -8.615850e-47 |
| Msa1087120 | Msa1354560 | 0.867348 | 1.461864e-65 | -8.615850e-47 |
| Msa1091700 | Msa1354560 | 0.805192 | 1.503061e-49 | -8.615850e-47 |
| Msa0263770 | Msa1354560 | 0.824991 | 5.979544e-54 | -8.615850e-47 |
| Msa0268190 | Msa1354560 | 0.819439 | 1.160830e-52 | -8.615850e-47 |
| Msa0268210 | Msa1354560 | 0.817287 | 3.566480e-52 | -8.615850e-47 |
| Msa0268250 | Msa1354560 | 0.867630 | 1.187711e-65 | -8.615850e-47 |
| Msa0268260 | Msa1354560 | 0.854759 | 9.935481e-62 | -8.615850e-47 |
| Msa0268270 | Msa1354560 | 0.856403 | 3.293888e-62 | -8.615850e-47 |
| Msa0268300 | Msa1354560 | 0.869113 | 3.949200e-66 | -8.615850e-47 |
| Msa0268310 | Msa1354560 | 0.872126 | 4.041415e-67 | -8.615850e-47 |
| Msa0268350 | Msa1354560 | 0.813893 | 2.032865e-51 | -8.615850e-47 |
| Msa0268410 | Msa1354560 | 0.801059 | 1.076344e-48 | -8.615850e-47 |
| Msa0268430 | Msa1354560 | 0.815719 | 8.005911e-52 | -8.615850e-47 |
| Msa0268450 | Msa1354560 | 0.827889 | 1.219167e-54 | -8.615850e-47 |
| Msa0268550 | Msa1354560 | 0.800829 | 1.199331e-48 | -8.615850e-47 |
| Msa0268570 | Msa1354560 | 0.844419 | 7.647924e-59 | -8.615850e-47 |
| Msa0268630 | Msa1354560 | 0.806368 | 8.509947e-50 | -8.615850e-47 |
| Msa0268670 | Msa1354560 | 0.832817 | 7.614295e-56 | -8.615850e-47 |
| Msa0268740 | Msa1354560 | 0.803254 | 3.805208e-49 | -8.615850e-47 |
| Msa0268750 | Msa1354560 | 0.846144 | 2.611789e-59 | -8.615850e-47 |
| Msa0268830 | Msa1354560 | 0.823831 | 1.120960e-53 | -8.615850e-47 |
| Msa0268860 | Msa1354560 | 0.814942 | 1.191402e-51 | -8.615850e-47 |
| Msa0268880 | Msa1354560 | 0.820192 | 7.810149e-53 | -8.615850e-47 |
| Msa0268960 | Msa1354560 | 0.848473 | 5.993553e-60 | -8.615850e-47 |
| Msa0269040 | Msa1354560 | 0.828921 | 6.871472e-55 | -8.615850e-47 |
| Msa0269070 | Msa1354560 | 0.818479 | 1.918236e-52 | -8.615850e-47 |
| Msa0269090 | Msa1354560 | 0.830001 | 3.755289e-55 | -8.615850e-47 |
| Msa0269130 | Msa1354560 | 0.874066 | 9.029580e-68 | -8.615850e-47 |
| Msa0269140 | Msa1354560 | 0.859911 | 2.980328e-63 | -8.615850e-47 |
| Msa0269150 | Msa1354560 | 0.856318 | 3.488090e-62 | -8.615850e-47 |
| Msa0344190 | Msa1354560 | 0.812991 | 3.208648e-51 | -8.615850e-47 |
| Msa0344210 | Msa1354560 | 0.815674 | 8.191309e-52 | -8.615850e-47 |
| Msa0344260 | Msa1354560 | 0.806420 | 8.296941e-50 | -8.615850e-47 |
| Msa0344310 | Msa1354560 | 0.804170 | 2.455955e-49 | -8.615850e-47 |
| Msa1143120 | Msa1354560 | 0.822601 | 2.170458e-53 | -8.615850e-47 |
| Msa1143160 | Msa1354560 | 0.801534 | 8.603663e-49 | -8.615850e-47 |
| Msa1143170 | Msa1354560 | 0.840686 | 7.489173e-58 | -8.615850e-47 |
| Msa0484040 | Msa1354560 | 0.813569 | 2.395081e-51 | -8.615850e-47 |
| Msa0581090 | Msa1354560 | 0.806618 | 7.536088e-50 | -8.615850e-47 |
| Msa0582510 | Msa1354560 | 0.831569 | 1.549870e-55 | -8.615850e-47 |
| Msa0582540 | Msa1354560 | 0.809704 | 1.658922e-50 | -8.615850e-47 |
| Msa0582560 | Msa1354560 | 0.814951 | 1.185943e-51 | -8.615850e-47 |
| Msa0582590 | Msa1354560 | 0.808461 | 3.062052e-50 | -8.615850e-47 |
| Msa0582610 | Msa1354560 | 0.803056 | 4.182837e-49 | -8.615850e-47 |
| Msa0582630 | Msa1354560 | 0.805617 | 1.224450e-49 | -8.615850e-47 |
| Msa0582640 | Msa1354560 | 0.811266 | 7.629935e-51 | -8.615850e-47 |
| Msa0582650 | Msa1354560 | 0.836940 | 6.967563e-57 | -8.615850e-47 |
| Msa0582690 | Msa1354560 | 0.820482 | 6.702300e-53 | -8.615850e-47 |
| Msa0582700 | Msa1354560 | 0.802420 | 5.658249e-49 | -8.615850e-47 |
| Msa0582760 | Msa1354560 | 0.804246 | 2.368881e-49 | -8.615850e-47 |
| Msa0582770 | Msa1354560 | 0.838176 | 3.359947e-57 | -8.615850e-47 |
| Msa0582810 | Msa1354560 | 0.830703 | 2.529889e-55 | -8.615850e-47 |
| Msa0582860 | Msa1354560 | 0.820553 | 6.455105e-53 | -8.615850e-47 |
| Msa0582870 | Msa1354560 | 0.810749 | 9.873904e-51 | -8.615850e-47 |
| Msa0582910 | Msa1354560 | 0.804018 | 2.642507e-49 | -8.615850e-47 |
| Msa0582920 | Msa1354560 | 0.841693 | 4.069272e-58 | -8.615850e-47 |
| Msa0591310 | Msa1354560 | 0.887230 | 1.712922e-72 | -8.615850e-47 |
| Msa0591350 | Msa1354560 | 0.848175 | 7.246651e-60 | -8.615850e-47 |
| Msa0591360 | Msa1354560 | 0.858215 | 9.602542e-63 | -8.615850e-47 |
| Msa0591380 | Msa1354560 | 0.803169 | 3.962364e-49 | -8.615850e-47 |
| Msa0867680 | Msa1354560 | 0.855707 | 5.266120e-62 | -8.615850e-47 |
| Msa0867690 | Msa1354560 | 0.862553 | 4.670462e-64 | -8.615850e-47 |
| Msa0876520 | Msa1354560 | 0.804473 | 2.123748e-49 | -8.615850e-47 |
| Msa0908220 | Msa1354560 | 0.881310 | 2.669681e-70 | -8.615850e-47 |
| Msa0908230 | Msa1354560 | 0.853618 | 2.120887e-61 | -8.615850e-47 |
| Msa0908240 | Msa1354560 | 0.838408 | 2.926825e-57 | -8.615850e-47 |
| Msa0908310 | Msa1354560 | 0.871688 | 5.649940e-67 | -8.615850e-47 |
| Msa0908320 | Msa1354560 | 0.905875 | 2.701260e-80 | -8.615850e-47 |
| Msa0908370 | Msa1354560 | 0.850200 | 1.980132e-60 | -8.615850e-47 |
| Msa0908380 | Msa1354560 | 0.885731 | 6.315073e-72 | -8.615850e-47 |
| Msa0908430 | Msa1354560 | 0.886392 | 3.560120e-72 | -8.615850e-47 |
| Msa0908440 | Msa1354560 | 0.849234 | 3.684891e-60 | -8.615850e-47 |
| Msa0908450 | Msa1354560 | 0.850100 | 2.112646e-60 | -8.615850e-47 |
| Msa0908480 | Msa1354560 | 0.827553 | 1.467956e-54 | -8.615850e-47 |
| Msa0908530 | Msa1354560 | 0.860773 | 1.635262e-63 | -8.615850e-47 |
| Msa0908540 | Msa1354560 | 0.875481 | 2.979074e-68 | -8.615850e-47 |
| Msa0908590 | Msa1354560 | 0.859441 | 4.128258e-63 | -8.615850e-47 |
| Msa0908600 | Msa1354560 | 0.831026 | 2.107934e-55 | -8.615850e-47 |
| Msa0908610 | Msa1354560 | 0.835188 | 1.940142e-56 | -8.615850e-47 |
| Msa0908650 | Msa1354560 | 0.878989 | 1.796793e-69 | -8.615850e-47 |
| Msa0908660 | Msa1354560 | 0.863508 | 2.367577e-64 | -8.615850e-47 |
| Msa0908670 | Msa1354560 | 0.854558 | 1.136251e-61 | -8.615850e-47 |
| Msa0908720 | Msa1354560 | 0.849047 | 4.155584e-60 | -8.615850e-47 |
| Msa0908730 | Msa1354560 | 0.872369 | 3.352458e-67 | -8.615850e-47 |
| Msa0911190 | Msa1354560 | 0.835983 | 1.220949e-56 | -8.615850e-47 |
| Msa0911200 | Msa1354560 | 0.861918 | 7.317188e-64 | -8.615850e-47 |
| Msa0911230 | Msa1354560 | 0.815042 | 1.132291e-51 | -8.615850e-47 |
| Msa0924830 | Msa1354560 | 0.852222 | 5.317028e-61 | -8.615850e-47 |
| Msa0924880 | Msa1354560 | 0.821971 | 3.040327e-53 | -8.615850e-47 |
| Msa0924930 | Msa1354560 | 0.865450 | 5.852130e-65 | -8.615850e-47 |
| Msa0924940 | Msa1354560 | 0.888184 | 7.393990e-73 | -8.615850e-47 |
| Msa0925100 | Msa1354560 | 0.860382 | 2.148136e-63 | -8.615850e-47 |
| Msa0925110 | Msa1354560 | 0.886593 | 2.988802e-72 | -8.615850e-47 |
| Msa0931070 | Msa1354560 | 0.805688 | 1.183276e-49 | -8.615850e-47 |
| Msa0931110 | Msa1354560 | 0.807157 | 5.796375e-50 | -8.615850e-47 |
| Msa0931130 | Msa1354560 | 0.819128 | 1.366226e-52 | -8.615850e-47 |
| Msa0931220 | Msa1354560 | 0.809155 | 2.176200e-50 | -8.615850e-47 |
| Msa0931230 | Msa1354560 | 0.830475 | 2.876923e-55 | -8.615850e-47 |
| Msa0931260 | Msa1354560 | 0.842774 | 2.105510e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354560 | MtrunA17_Chr1g0195541 | 72.727 | 132 | 0 | 1 | 1 | 96 | 1 | 132 | 2.18e-57 | 180 |
| Msa1354560 | MtrunA17_CPg0492431 | 72.727 | 132 | 0 | 1 | 1 | 96 | 106 | 237 | 5.10e-56 | 180 |
| Msa1354560 | MtrunA17_Chr3g0090851 | 72.727 | 132 | 0 | 1 | 1 | 96 | 106 | 237 | 5.10e-56 | 180 |
| Msa1354560 | MtrunA17_Chr4g0016091 | 72.727 | 132 | 0 | 1 | 1 | 96 | 106 | 237 | 5.10e-56 | 180 |
| Msa1354560 | MtrunA17_Chr3g0090871 | 98.864 | 88 | 1 | 0 | 155 | 242 | 1 | 88 | 1.17e-55 | 176 |
| Msa1354560 | MtrunA17_CPg0492451 | 98.864 | 88 | 1 | 0 | 155 | 242 | 1 | 88 | 8.32e-55 | 175 |
| Msa1354560 | MtrunA17_Chr4g0016071 | 98.864 | 88 | 1 | 0 | 155 | 242 | 1 | 88 | 8.32e-55 | 175 |
| Msa1354560 | MtrunA17_Chr0c03g0489881 | 34.459 | 148 | 86 | 4 | 93 | 240 | 2 | 138 | 1.70e-13 | 67.4 |
| Msa1354560 | MtrunA17_MTg0491931 | 34.459 | 148 | 86 | 4 | 93 | 240 | 2 | 138 | 1.70e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354560 | ATCG00890.1 | 80.505 | 277 | 11 | 2 | 1 | 241 | 1 | 270 | 1.26e-138 | 395 |
| Msa1354560 | ATCG01250.1 | 80.505 | 277 | 11 | 2 | 1 | 241 | 1 | 270 | 1.26e-138 | 395 |
| Msa1354560 | AT2G07689.1 | 34.459 | 148 | 86 | 4 | 93 | 240 | 2 | 138 | 8.55e-13 | 65.9 |
Find 48 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGATATGTAATTAT+TGG | 0.189063 | tig0014543:+381113 | Msa1354560:CDS |
| CATGGTTTCTCTTGGCTATA+TGG | 0.197078 | tig0014543:+380021 | Msa1354560:CDS |
| TGGGGCAAGCTCTTCTATTC+TGG | 0.197255 | tig0014543:+379996 | Msa1354560:CDS |
| GCTATTCTTAGCATGCTATT+AGG | 0.213688 | tig0014543:+381029 | Msa1354560:CDS |
| TTTGCTTGCATTGTGTTATT+TGG | 0.223841 | tig0014543:+381218 | Msa1354560:CDS |
| ATTAGACCGTACATCTTTCT+TGG | 0.278852 | tig0014543:-379944 | None:intergenic |
| TCGTTTGATGAGAAATAAAA+AGG | 0.282633 | tig0014543:-380981 | None:intergenic |
| AGCTCTTCTATTCTGGTTCA+TGG | 0.287942 | tig0014543:+380003 | Msa1354560:CDS |
| CTATTCTTAGCATGCTATTA+GGG | 0.301257 | tig0014543:+381030 | Msa1354560:CDS |
| TATTCGTCCATAGGTCAAAT+TGG | 0.303171 | tig0014543:+381098 | Msa1354560:CDS |
| GCATACGTTTCATGCTTGTT+TGG | 0.326865 | tig0014543:-381070 | None:intergenic |
| TTCTGGTTCATGGTTTCTCT+TGG | 0.336946 | tig0014543:+380013 | Msa1354560:CDS |
| TTATGCTCCTATCTACTATC+TGG | 0.367530 | tig0014543:+379916 | Msa1354560:CDS |
| CATACGTTTCATGCTTGTTT+GGG | 0.369828 | tig0014543:-381069 | None:intergenic |
| GTAATTATTGGAATAATTGT+TGG | 0.373428 | tig0014543:+381125 | Msa1354560:CDS |
| CCCTAGCCCCTTCTCATCAA+TGG | 0.393307 | tig0014543:+380168 | Msa1354560:CDS |
| GTGTTATTTGGTCTACGTAC+TGG | 0.413420 | tig0014543:+381230 | Msa1354560:CDS |
| TATTCATCACTGTAGGAATT+GGG | 0.417349 | tig0014543:+380135 | Msa1354560:intron |
| TACATATCCAATTTGACCTA+TGG | 0.420081 | tig0014543:-381105 | None:intergenic |
| AGCAAAAGTTCCTAGATTCA+TGG | 0.448640 | tig0014543:-381201 | None:intergenic |
| TTCTATATCTCCATGAATCT+AGG | 0.460861 | tig0014543:+381191 | Msa1354560:CDS |
| TACTATGAAATATTTACTCA+TGG | 0.474204 | tig0014543:+379972 | Msa1354560:CDS |
| GGTATATCCAGATAGTAGAT+AGG | 0.488329 | tig0014543:-379923 | None:intergenic |
| TGAAATATTTACTCATGGGT+GGG | 0.506663 | tig0014543:+379977 | Msa1354560:CDS |
| TCCATTGATGAGAAGGGGCT+AGG | 0.510524 | tig0014543:-380169 | None:intergenic |
| ATGCTTGCTTATTCGTCCAT+AGG | 0.517225 | tig0014543:+381089 | Msa1354560:CDS |
| TTTATTTCTCATCAAACGAA+TGG | 0.522523 | tig0014543:+380985 | Msa1354560:CDS |
| GATAACATTCGAGATTATGC+AGG | 0.531827 | tig0014543:+381257 | Msa1354560:CDS |
| ATGAAATATTTACTCATGGG+TGG | 0.533610 | tig0014543:+379976 | Msa1354560:CDS |
| GAAATATTTACTCATGGGTG+GGG | 0.537789 | tig0014543:+379978 | Msa1354560:CDS |
| CAGGAGTCCATTGATGAGAA+GGG | 0.542754 | tig0014543:-380175 | None:intergenic |
| ATAATTGTTGGAGACTCAAA+TGG | 0.548093 | tig0014543:+381137 | Msa1354560:CDS |
| TCAGGAGTCCATTGATGAGA+AGG | 0.551074 | tig0014543:-380176 | None:intergenic |
| AGAAAAGCAACGACTGGAGT+CGG | 0.551106 | tig0014543:-380903 | None:intergenic |
| CCATTGATGAGAAGGGGCTA+GGG | 0.552174 | tig0014543:-380168 | None:intergenic |
| TTCATATTAACCGCTACTCT+AGG | 0.552712 | tig0014543:+379829 | Msa1354560:CDS |
| GAAAGATGTACGGTCTAATG+AGG | 0.565206 | tig0014543:+379948 | Msa1354560:CDS |
| GGAGAGTCAGAGTCGAAAAG+AGG | 0.572366 | tig0014543:-380882 | None:intergenic |
| ATAGCATGCTAAGAATAGCT+AGG | 0.576533 | tig0014543:-381025 | None:intergenic |
| ACAGAAAGAAAAGCAACGAC+TGG | 0.577795 | tig0014543:-380909 | None:intergenic |
| ACTATGAAATATTTACTCAT+GGG | 0.584827 | tig0014543:+379973 | Msa1354560:CDS |
| TTGAATGAGAGAAAGAAGTG+AGG | 0.599130 | tig0014543:+380856 | Msa1354560:intron |
| ATATTAACCGCTACTCTAGG+AGG | 0.609728 | tig0014543:+379832 | Msa1354560:CDS |
| GATATACCAAGAAAGATGTA+CGG | 0.625842 | tig0014543:+379938 | Msa1354560:CDS |
| ATTGTTGGAGACTCAAATGG+TGG | 0.626325 | tig0014543:+381140 | Msa1354560:CDS |
| AGGAGTCCATTGATGAGAAG+GGG | 0.632944 | tig0014543:-380174 | None:intergenic |
| AGGAATATCGAAAATTCGAG+TGG | 0.650147 | tig0014543:-380961 | None:intergenic |
| AAACATTCCTCCTAGAGTAG+CGG | 0.663526 | tig0014543:-379839 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | tig0014543:380332-380351 | Msa1354560:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | tig0014543:380645-380664 | Msa1354560:intron | 15.0% |
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | tig0014543:380332-380351 | Msa1354560:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | tig0014543:380645-380664 | Msa1354560:intron | 15.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | tig0014543:379972-379991 | Msa1354560:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | tig0014543:379973-379992 | Msa1354560:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | tig0014543:380401-380420 | Msa1354560:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | tig0014543:380722-380741 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | tig0014543:380722-380741 | Msa1354560:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | tig0014543:381113-381132 | Msa1354560:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | tig0014543:381125-381144 | Msa1354560:CDS | 20.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | tig0014543:379972-379991 | Msa1354560:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | tig0014543:379973-379992 | Msa1354560:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | tig0014543:380401-380420 | Msa1354560:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | tig0014543:380722-380741 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | tig0014543:380722-380741 | Msa1354560:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | tig0014543:381113-381132 | Msa1354560:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | tig0014543:381125-381144 | Msa1354560:CDS | 20.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | tig0014543:380261-380280 | Msa1354560:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | tig0014543:380320-380339 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | tig0014543:380402-380421 | Msa1354560:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | tig0014543:380433-380452 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | tig0014543:380461-380480 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | tig0014543:380728-380747 | Msa1354560:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | - | tig0014543:380797-380816 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | + | tig0014543:380801-380820 | Msa1354560:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | tig0014543:380984-381003 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | tig0014543:380985-381004 | Msa1354560:CDS | 25.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | tig0014543:380261-380280 | Msa1354560:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | tig0014543:380320-380339 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | tig0014543:380402-380421 | Msa1354560:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | tig0014543:380433-380452 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | tig0014543:380461-380480 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | tig0014543:380728-380747 | Msa1354560:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | - | tig0014543:380797-380816 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | + | tig0014543:380801-380820 | Msa1354560:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | tig0014543:380984-381003 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | tig0014543:380985-381004 | Msa1354560:CDS | 25.0% |
| GATATACCAAGAAAGATGTA+CGG | + | tig0014543:379938-379957 | Msa1354560:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | tig0014543:379976-379995 | Msa1354560:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | tig0014543:379977-379996 | Msa1354560:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | tig0014543:380134-380153 | Msa1354560:intron | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | tig0014543:380135-380154 | Msa1354560:intron | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | tig0014543:380242-380261 | Msa1354560:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | tig0014543:380507-380526 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | tig0014543:380507-380526 | Msa1354560:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | tig0014543:380607-380626 | Msa1354560:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | tig0014543:381030-381049 | Msa1354560:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | tig0014543:381108-381127 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | tig0014543:381137-381156 | Msa1354560:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | tig0014543:381191-381210 | Msa1354560:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | tig0014543:381218-381237 | Msa1354560:CDS | 30.0% |
| GATATACCAAGAAAGATGTA+CGG | + | tig0014543:379938-379957 | Msa1354560:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | tig0014543:379976-379995 | Msa1354560:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | tig0014543:379977-379996 | Msa1354560:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | tig0014543:380134-380153 | Msa1354560:intron | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | tig0014543:380135-380154 | Msa1354560:intron | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | tig0014543:380242-380261 | Msa1354560:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | tig0014543:380507-380526 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | tig0014543:380507-380526 | Msa1354560:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | tig0014543:380607-380626 | Msa1354560:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | tig0014543:381030-381049 | Msa1354560:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | tig0014543:381108-381127 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | tig0014543:381137-381156 | Msa1354560:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | tig0014543:381191-381210 | Msa1354560:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | tig0014543:381218-381237 | Msa1354560:CDS | 30.0% |
| TTCATATTAACCGCTACTCT+AGG | + | tig0014543:379829-379848 | Msa1354560:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | tig0014543:379916-379935 | Msa1354560:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | tig0014543:379926-379945 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | tig0014543:379947-379966 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | tig0014543:379978-379997 | Msa1354560:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | tig0014543:380062-380081 | Msa1354560:intron | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | tig0014543:380115-380134 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | tig0014543:380116-380135 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | tig0014543:380236-380255 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | tig0014543:380240-380259 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | tig0014543:380374-380393 | Msa1354560:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | tig0014543:380384-380403 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | tig0014543:380409-380428 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | tig0014543:380474-380493 | Msa1354560:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | tig0014543:380579-380598 | Msa1354560:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | tig0014543:380615-380634 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | tig0014543:380616-380635 | Msa1354560:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | tig0014543:380635-380654 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | tig0014543:380856-380875 | Msa1354560:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | tig0014543:380964-380983 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | tig0014543:381028-381047 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | tig0014543:381029-381048 | Msa1354560:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | tig0014543:381072-381091 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | tig0014543:381098-381117 | Msa1354560:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | tig0014543:381204-381223 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | tig0014543:381257-381276 | Msa1354560:CDS | 35.0% | |
| TTCATATTAACCGCTACTCT+AGG | + | tig0014543:379829-379848 | Msa1354560:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | tig0014543:379916-379935 | Msa1354560:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | tig0014543:379926-379945 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | tig0014543:379947-379966 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | tig0014543:379978-379997 | Msa1354560:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | tig0014543:380062-380081 | Msa1354560:intron | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | tig0014543:380115-380134 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | tig0014543:380116-380135 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | tig0014543:380236-380255 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | tig0014543:380240-380259 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | tig0014543:380374-380393 | Msa1354560:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | tig0014543:380384-380403 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | tig0014543:380409-380428 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | tig0014543:380474-380493 | Msa1354560:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | tig0014543:380579-380598 | Msa1354560:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | tig0014543:380615-380634 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | tig0014543:380616-380635 | Msa1354560:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | tig0014543:380635-380654 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | tig0014543:380856-380875 | Msa1354560:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | tig0014543:380964-380983 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | tig0014543:381028-381047 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | tig0014543:381029-381048 | Msa1354560:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | tig0014543:381072-381091 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | tig0014543:381098-381117 | Msa1354560:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | tig0014543:381204-381223 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | tig0014543:381257-381276 | Msa1354560:CDS | 35.0% | |
| ATATTAACCGCTACTCTAGG+AGG | + | tig0014543:379832-379851 | Msa1354560:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | tig0014543:379842-379861 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | tig0014543:379948-379967 | Msa1354560:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | tig0014543:380003-380022 | Msa1354560:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | tig0014543:380013-380032 | Msa1354560:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | tig0014543:380021-380040 | Msa1354560:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | tig0014543:380095-380114 | Msa1354560:intron | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | tig0014543:380114-380133 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | tig0014543:380128-380147 | Msa1354560:intron | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | tig0014543:380347-380366 | Msa1354560:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | tig0014543:380375-380394 | Msa1354560:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | tig0014543:380383-380402 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | tig0014543:380538-380557 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | tig0014543:380556-380575 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | tig0014543:380557-380576 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | tig0014543:380668-380687 | Msa1354560:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | tig0014543:380687-380706 | Msa1354560:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | tig0014543:380693-380712 | Msa1354560:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | tig0014543:380697-380716 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | tig0014543:380912-380931 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | tig0014543:381073-381092 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | tig0014543:381089-381108 | Msa1354560:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | tig0014543:381140-381159 | Msa1354560:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | tig0014543:381230-381249 | Msa1354560:CDS | 40.0% |
| ATATTAACCGCTACTCTAGG+AGG | + | tig0014543:379832-379851 | Msa1354560:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | tig0014543:379842-379861 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | tig0014543:379948-379967 | Msa1354560:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | tig0014543:380003-380022 | Msa1354560:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | tig0014543:380013-380032 | Msa1354560:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | tig0014543:380021-380040 | Msa1354560:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | tig0014543:380095-380114 | Msa1354560:intron | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | tig0014543:380114-380133 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | tig0014543:380128-380147 | Msa1354560:intron | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | tig0014543:380347-380366 | Msa1354560:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | tig0014543:380375-380394 | Msa1354560:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | tig0014543:380383-380402 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | tig0014543:380538-380557 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | tig0014543:380556-380575 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | tig0014543:380557-380576 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | tig0014543:380668-380687 | Msa1354560:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | tig0014543:380687-380706 | Msa1354560:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | tig0014543:380693-380712 | Msa1354560:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | tig0014543:380697-380716 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | tig0014543:380912-380931 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | tig0014543:381073-381092 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | tig0014543:381089-381108 | Msa1354560:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | tig0014543:381140-381159 | Msa1354560:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | tig0014543:381230-381249 | Msa1354560:CDS | 40.0% |
| TCTTGGCTATATGGTTCGTC+CGG | + | tig0014543:380030-380049 | Msa1354560:intron | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | tig0014543:380177-380196 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | tig0014543:380178-380197 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | tig0014543:380179-380198 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | tig0014543:380188-380207 | Msa1354560:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | tig0014543:380195-380214 | Msa1354560:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | tig0014543:380293-380312 | Msa1354560:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | tig0014543:380310-380329 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | tig0014543:380311-380330 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | tig0014543:380362-380381 | Msa1354560:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | tig0014543:380526-380545 | Msa1354560:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | tig0014543:380681-380700 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | tig0014543:380746-380765 | Msa1354560:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | tig0014543:380750-380769 | Msa1354560:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | tig0014543:380829-380848 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | tig0014543:380831-380850 | Msa1354560:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | tig0014543:380906-380925 | None:intergenic | 45.0% | |
| TCTTGGCTATATGGTTCGTC+CGG | + | tig0014543:380030-380049 | Msa1354560:intron | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | tig0014543:380177-380196 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | tig0014543:380178-380197 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | tig0014543:380179-380198 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | tig0014543:380188-380207 | Msa1354560:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | tig0014543:380195-380214 | Msa1354560:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | tig0014543:380293-380312 | Msa1354560:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | tig0014543:380310-380329 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | tig0014543:380311-380330 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | tig0014543:380362-380381 | Msa1354560:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | tig0014543:380526-380545 | Msa1354560:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | tig0014543:380681-380700 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | tig0014543:380746-380765 | Msa1354560:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | tig0014543:380750-380769 | Msa1354560:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | tig0014543:380829-380848 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | tig0014543:380831-380850 | Msa1354560:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | tig0014543:380906-380925 | None:intergenic | 45.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | + | tig0014543:379996-380015 | Msa1354560:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | tig0014543:380031-380050 | Msa1354560:intron | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | tig0014543:380032-380051 | Msa1354560:intron | 50.0% | |
| CTTGAAGCTCTATCTCTCCC+CGG | - | tig0014543:380052-380071 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | tig0014543:380171-380190 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | tig0014543:380172-380191 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | tig0014543:380197-380216 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | tig0014543:380627-380646 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | tig0014543:380885-380904 | None:intergenic | 50.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | + | tig0014543:379996-380015 | Msa1354560:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | tig0014543:380031-380050 | Msa1354560:intron | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | tig0014543:380032-380051 | Msa1354560:intron | 50.0% | |
| CTTGAAGCTCTATCTCTCCC+CGG | - | tig0014543:380052-380071 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | tig0014543:380171-380190 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | tig0014543:380172-380191 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | tig0014543:380197-380216 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | tig0014543:380627-380646 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | tig0014543:380885-380904 | None:intergenic | 50.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | tig0014543:380168-380187 | Msa1354560:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | tig0014543:380168-380187 | Msa1354560:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0014543 | gene | 379805 | 381316 | 379805 | ID=Msa1354560;Name=Msa1354560 |
| tig0014543 | mRNA | 379805 | 381316 | 379805 | ID=Msa1354560-mRNA-1;Parent=Msa1354560;Name=Msa1354560-mRNA-1;_AED=0.80;_eAED=0.80;_QI=0|0|0|0.66|1|1|3|0|245 |
| tig0014543 | exon | 379805 | 380042 | 379805 | ID=Msa1354560-mRNA-1:exon:9135;Parent=Msa1354560-mRNA-1 |
| tig0014543 | exon | 380150 | 380199 | 380150 | ID=Msa1354560-mRNA-1:exon:9136;Parent=Msa1354560-mRNA-1 |
| tig0014543 | exon | 380867 | 381316 | 380867 | ID=Msa1354560-mRNA-1:exon:9137;Parent=Msa1354560-mRNA-1 |
| tig0014543 | CDS | 379805 | 380042 | 379805 | ID=Msa1354560-mRNA-1:cds;Parent=Msa1354560-mRNA-1 |
| tig0014543 | CDS | 380150 | 380199 | 380150 | ID=Msa1354560-mRNA-1:cds;Parent=Msa1354560-mRNA-1 |
| tig0014543 | CDS | 380867 | 381316 | 380867 | ID=Msa1354560-mRNA-1:cds;Parent=Msa1354560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
