Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460120 | RYR53088.1 | 71.530 | 281 | 26 | 2 | 49 | 275 | 65 | 345 | 4.11e-130 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460120 | sp|Q9GE26|RR7_AMBTC | 93.182 | 132 | 5 | 1 | 83 | 210 | 23 | 154 | 8.92e-83 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460120 | A0A445CQA9 | 71.530 | 281 | 26 | 2 | 49 | 275 | 65 | 345 | 1.96e-130 | 384 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1354420 | Msa1460120 | 0.845719 | 3.407011e-59 | -8.615850e-47 |
| Msa1354430 | Msa1460120 | 0.845198 | 4.715024e-59 | -8.615850e-47 |
| Msa1354480 | Msa1460120 | 0.829730 | 4.370537e-55 | -8.615850e-47 |
| Msa1354490 | Msa1460120 | 0.850023 | 2.220351e-60 | -8.615850e-47 |
| Msa1354500 | Msa1460120 | 0.859532 | 3.875579e-63 | -8.615850e-47 |
| Msa1354550 | Msa1460120 | 0.846299 | 2.370315e-59 | -8.615850e-47 |
| Msa1354560 | Msa1460120 | 0.837009 | 6.694042e-57 | -8.615850e-47 |
| Msa1354610 | Msa1460120 | 0.847039 | 1.487553e-59 | -8.615850e-47 |
| Msa1354620 | Msa1460120 | 0.842600 | 2.342862e-58 | -8.615850e-47 |
| Msa1354630 | Msa1460120 | 0.859053 | 5.396334e-63 | -8.615850e-47 |
| Msa1354680 | Msa1460120 | 0.848054 | 7.825051e-60 | -8.615850e-47 |
| Msa1354690 | Msa1460120 | 0.853113 | 2.962263e-61 | -8.615850e-47 |
| Msa1354700 | Msa1460120 | 0.828162 | 1.048076e-54 | -8.615850e-47 |
| Msa1354740 | Msa1460120 | 0.850741 | 1.395844e-60 | -8.615850e-47 |
| Msa1354750 | Msa1460120 | 0.844006 | 9.876172e-59 | -8.615850e-47 |
| Msa1354760 | Msa1460120 | 0.857969 | 1.136011e-62 | -8.615850e-47 |
| Msa1354810 | Msa1460120 | 0.850839 | 1.309869e-60 | -8.615850e-47 |
| Msa1354820 | Msa1460120 | 0.842332 | 2.759203e-58 | -8.615850e-47 |
| Msa1354980 | Msa1460120 | 0.845286 | 4.465739e-59 | -8.615850e-47 |
| Msa1354990 | Msa1460120 | 0.836764 | 7.729812e-57 | -8.615850e-47 |
| Msa1365890 | Msa1460120 | 0.863462 | 2.446515e-64 | -8.615850e-47 |
| Msa1365900 | Msa1460120 | 0.802033 | 6.798192e-49 | -8.615850e-47 |
| Msa1365950 | Msa1460120 | 0.827877 | 1.227384e-54 | -8.615850e-47 |
| Msa1365960 | Msa1460120 | 0.808543 | 2.941915e-50 | -8.615850e-47 |
| Msa1365970 | Msa1460120 | 0.850894 | 1.263858e-60 | -8.615850e-47 |
| Msa1366080 | Msa1460120 | 0.837672 | 4.526995e-57 | -8.615850e-47 |
| Msa1368230 | Msa1460120 | 0.836322 | 1.001801e-56 | -8.615850e-47 |
| Msa1368240 | Msa1460120 | 0.842488 | 2.507654e-58 | -8.615850e-47 |
| Msa1385410 | Msa1460120 | 0.839288 | 1.732885e-57 | -8.615850e-47 |
| Msa1385420 | Msa1460120 | 0.808597 | 2.864141e-50 | -8.615850e-47 |
| Msa1391090 | Msa1460120 | 0.819675 | 1.025592e-52 | -8.615850e-47 |
| Msa1391100 | Msa1460120 | 0.840206 | 9.996146e-58 | -8.615850e-47 |
| Msa1391110 | Msa1460120 | 0.850929 | 1.235874e-60 | -8.615850e-47 |
| Msa1391160 | Msa1460120 | 0.817690 | 2.893201e-52 | -8.615850e-47 |
| Msa1391170 | Msa1460120 | 0.820764 | 5.772467e-53 | -8.615850e-47 |
| Msa1391220 | Msa1460120 | 0.829006 | 6.552917e-55 | -8.615850e-47 |
| Msa1391230 | Msa1460120 | 0.832336 | 1.001921e-55 | -8.615850e-47 |
| Msa1391240 | Msa1460120 | 0.866771 | 2.234011e-65 | -8.615850e-47 |
| Msa1460120 | Msa1460130 | 0.874950 | 4.522461e-68 | -8.615850e-47 |
| Msa1342040 | Msa1460120 | 0.810520 | 1.106736e-50 | -8.615850e-47 |
| Msa0405420 | Msa1460120 | 0.874345 | 7.259573e-68 | -8.615850e-47 |
| Msa0405430 | Msa1460120 | 0.929988 | 3.147249e-93 | -8.615850e-47 |
| Msa0405440 | Msa1460120 | 0.869673 | 2.595355e-66 | -8.615850e-47 |
| Msa0405510 | Msa1460120 | 0.875878 | 2.177634e-68 | -8.615850e-47 |
| Msa0405520 | Msa1460120 | 0.926393 | 4.987964e-91 | -8.615850e-47 |
| Msa0405530 | Msa1460120 | 0.877283 | 7.114794e-69 | -8.615850e-47 |
| Msa0983630 | Msa1460120 | 0.842181 | 3.025207e-58 | -8.615850e-47 |
| Msa0983640 | Msa1460120 | 0.808477 | 3.038556e-50 | -8.615850e-47 |
| Msa1022050 | Msa1460120 | 0.819015 | 1.449704e-52 | -8.615850e-47 |
| Msa1022060 | Msa1460120 | 0.805646 | 1.207307e-49 | -8.615850e-47 |
| Msa1064410 | Msa1460120 | 0.809653 | 1.701119e-50 | -8.615850e-47 |
| Msa1086550 | Msa1460120 | 0.835590 | 1.535819e-56 | -8.615850e-47 |
| Msa1086590 | Msa1460120 | 0.832135 | 1.123782e-55 | -8.615850e-47 |
| Msa1086600 | Msa1460120 | 0.829043 | 6.419401e-55 | -8.615850e-47 |
| Msa1086720 | Msa1460120 | 0.822515 | 2.273140e-53 | -8.615850e-47 |
| Msa1086730 | Msa1460120 | 0.820911 | 5.339903e-53 | -8.615850e-47 |
| Msa1086740 | Msa1460120 | 0.861518 | 9.695789e-64 | -8.615850e-47 |
| Msa1086790 | Msa1460120 | 0.862200 | 5.996311e-64 | -8.615850e-47 |
| Msa1086800 | Msa1460120 | 0.849512 | 3.082963e-60 | -8.615850e-47 |
| Msa1086960 | Msa1460120 | 0.836874 | 7.245339e-57 | -8.615850e-47 |
| Msa1086970 | Msa1460120 | 0.816747 | 4.714499e-52 | -8.615850e-47 |
| Msa1087030 | Msa1460120 | 0.834927 | 2.257694e-56 | -8.615850e-47 |
| Msa1087040 | Msa1460120 | 0.827048 | 1.939453e-54 | -8.615850e-47 |
| Msa1087050 | Msa1460120 | 0.847550 | 1.077575e-59 | -8.615850e-47 |
| Msa1087110 | Msa1460120 | 0.843018 | 1.813701e-58 | -8.615850e-47 |
| Msa1087120 | Msa1460120 | 0.837535 | 4.908323e-57 | -8.615850e-47 |
| Msa0263770 | Msa1460120 | 0.950335 | 2.037066e-108 | -8.615850e-47 |
| Msa0268250 | Msa1460120 | 0.800898 | 1.161408e-48 | -8.615850e-47 |
| Msa0268260 | Msa1460120 | 0.839252 | 1.770982e-57 | -8.615850e-47 |
| Msa0268270 | Msa1460120 | 0.856281 | 3.577639e-62 | -8.615850e-47 |
| Msa0268300 | Msa1460120 | 0.831493 | 1.617925e-55 | -8.615850e-47 |
| Msa0268310 | Msa1460120 | 0.840015 | 1.121443e-57 | -8.615850e-47 |
| Msa0269130 | Msa1460120 | 0.817872 | 2.632348e-52 | -8.615850e-47 |
| Msa0269140 | Msa1460120 | 0.852033 | 6.020692e-61 | -8.615850e-47 |
| Msa0269150 | Msa1460120 | 0.855638 | 5.516199e-62 | -8.615850e-47 |
| Msa0591290 | Msa1460120 | 0.884325 | 2.112632e-71 | -8.615850e-47 |
| Msa0591310 | Msa1460120 | 0.848476 | 5.982902e-60 | -8.615850e-47 |
| Msa0591350 | Msa1460120 | 0.902802 | 6.676127e-79 | -8.615850e-47 |
| Msa0591360 | Msa1460120 | 0.828652 | 7.981993e-55 | -8.615850e-47 |
| Msa0591380 | Msa1460120 | 0.844830 | 5.928631e-59 | -8.615850e-47 |
| Msa0844260 | Msa1460120 | 0.809905 | 1.501982e-50 | -8.615850e-47 |
| Msa0867680 | Msa1460120 | 0.835522 | 1.597745e-56 | -8.615850e-47 |
| Msa0867690 | Msa1460120 | 0.819743 | 9.895080e-53 | -8.615850e-47 |
| Msa0876520 | Msa1460120 | 0.855780 | 5.015022e-62 | -8.615850e-47 |
| Msa0876530 | Msa1460120 | 0.845244 | 4.581729e-59 | -8.615850e-47 |
| Msa0908220 | Msa1460120 | 0.843753 | 1.154136e-58 | -8.615850e-47 |
| Msa0908230 | Msa1460120 | 0.863638 | 2.157419e-64 | -8.615850e-47 |
| Msa0908240 | Msa1460120 | 0.862187 | 6.053574e-64 | -8.615850e-47 |
| Msa0908310 | Msa1460120 | 0.859679 | 3.500383e-63 | -8.615850e-47 |
| Msa0908320 | Msa1460120 | 0.844923 | 5.597545e-59 | -8.615850e-47 |
| Msa0908370 | Msa1460120 | 0.844471 | 7.408159e-59 | -8.615850e-47 |
| Msa0908380 | Msa1460120 | 0.808806 | 2.583844e-50 | -8.615850e-47 |
| Msa0908430 | Msa1460120 | 0.855961 | 4.439400e-62 | -8.615850e-47 |
| Msa0908440 | Msa1460120 | 0.847579 | 1.057427e-59 | -8.615850e-47 |
| Msa0908450 | Msa1460120 | 0.861020 | 1.375506e-63 | -8.615850e-47 |
| Msa0908530 | Msa1460120 | 0.854400 | 1.262725e-61 | -8.615850e-47 |
| Msa0908540 | Msa1460120 | 0.839176 | 1.852970e-57 | -8.615850e-47 |
| Msa0908590 | Msa1460120 | 0.829037 | 6.439101e-55 | -8.615850e-47 |
| Msa0908600 | Msa1460120 | 0.834207 | 3.424775e-56 | -8.615850e-47 |
| Msa0908610 | Msa1460120 | 0.828048 | 1.116401e-54 | -8.615850e-47 |
| Msa0908650 | Msa1460120 | 0.831614 | 1.510958e-55 | -8.615850e-47 |
| Msa0908660 | Msa1460120 | 0.832595 | 8.640970e-56 | -8.615850e-47 |
| Msa0908670 | Msa1460120 | 0.852683 | 3.929219e-61 | -8.615850e-47 |
| Msa0908720 | Msa1460120 | 0.849624 | 2.869672e-60 | -8.615850e-47 |
| Msa0908730 | Msa1460120 | 0.845405 | 4.144449e-59 | -8.615850e-47 |
| Msa0911190 | Msa1460120 | 0.861822 | 7.832880e-64 | -8.615850e-47 |
| Msa0911200 | Msa1460120 | 0.825912 | 3.618070e-54 | -8.615850e-47 |
| Msa0911230 | Msa1460120 | 0.820970 | 5.177007e-53 | -8.615850e-47 |
| Msa0924830 | Msa1460120 | 0.812746 | 3.629616e-51 | -8.615850e-47 |
| Msa0924930 | Msa1460120 | 0.871789 | 5.229735e-67 | -8.615850e-47 |
| Msa0924940 | Msa1460120 | 0.842736 | 2.154749e-58 | -8.615850e-47 |
| Msa0925100 | Msa1460120 | 0.926357 | 5.242817e-91 | -8.615850e-47 |
| Msa0925110 | Msa1460120 | 0.867981 | 9.161176e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460120 | MtrunA17_CPg0492421 | 88.806 | 134 | 9 | 2 | 83 | 210 | 23 | 156 | 1.25e-77 | 232 |
| Msa1460120 | MtrunA17_Chr4g0016101 | 88.806 | 134 | 9 | 2 | 83 | 210 | 23 | 156 | 1.25e-77 | 232 |
| Msa1460120 | MtrunA17_Chr3g0090841 | 88.806 | 134 | 9 | 2 | 83 | 210 | 23 | 156 | 1.25e-77 | 232 |
| Msa1460120 | MtrunA17_CPg0492431 | 96.875 | 64 | 2 | 0 | 212 | 275 | 4 | 67 | 6.61e-36 | 129 |
| Msa1460120 | MtrunA17_Chr3g0090851 | 96.875 | 64 | 2 | 0 | 212 | 275 | 4 | 67 | 6.61e-36 | 129 |
| Msa1460120 | MtrunA17_Chr4g0016091 | 96.875 | 64 | 2 | 0 | 212 | 275 | 4 | 67 | 6.61e-36 | 129 |
| Msa1460120 | MtrunA17_Chr4g0002541 | 83.333 | 60 | 10 | 0 | 85 | 144 | 1 | 60 | 1.63e-28 | 103 |
| Msa1460120 | MtrunA17_Chr4g0057401 | 87.179 | 39 | 5 | 0 | 172 | 210 | 1 | 39 | 1.40e-15 | 68.9 |
| Msa1460120 | MtrunA17_Chr7g0234981 | 50.000 | 74 | 25 | 2 | 21 | 82 | 9 | 82 | 2.45e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460120 | ATCG00900.1 | 92.424 | 132 | 6 | 1 | 83 | 210 | 23 | 154 | 7.55e-83 | 246 |
| Msa1460120 | ATCG01240.1 | 92.424 | 132 | 6 | 1 | 83 | 210 | 23 | 154 | 7.55e-83 | 246 |
| Msa1460120 | ATCG00905.1 | 91.176 | 34 | 3 | 0 | 49 | 82 | 41 | 74 | 2.65e-14 | 67.4 |
| Msa1460120 | ATCG01230.1 | 91.176 | 34 | 3 | 0 | 49 | 82 | 41 | 74 | 2.65e-14 | 67.4 |
| Msa1460120 | ATMG01270.1 | 30.657 | 137 | 87 | 3 | 83 | 212 | 12 | 147 | 7.03e-12 | 62.4 |
| Msa1460120 | AT2G07696.1 | 30.657 | 137 | 87 | 3 | 83 | 212 | 12 | 147 | 7.03e-12 | 62.4 |
Find 52 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCGGGTATCTTTCACAAAA+AGG | 0.268806 | tig0040677:+7833 | Msa1460120:CDS |
| CATCAAGTTCCCGTTGAAAT+AGG | 0.307921 | tig0040677:+8787 | Msa1460120:CDS |
| AAAACGTCCAGGTCGAAATA+TGG | 0.317789 | tig0040677:+8861 | Msa1460120:CDS |
| AGATACCCGCTTTCGTGCTT+TGG | 0.338855 | tig0040677:-7821 | None:intergenic |
| CAAATTAAGTTCCGAATTAG+TGG | 0.342047 | tig0040677:+8888 | Msa1460120:CDS |
| TGGCGATGCCATACGCAAAA+AGG | 0.366109 | tig0040677:+8927 | Msa1460120:CDS |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | tig0040677:-8413 | None:intergenic |
| AAAAGGATTCCTATTCTAAA+GGG | 0.399720 | tig0040677:+7850 | Msa1460120:CDS |
| TTTGGCAGCATCCACTAATT+CGG | 0.404543 | tig0040677:-8899 | None:intergenic |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | tig0040677:-8440 | None:intergenic |
| GCTTGACGTAAAACAGATAG+TGG | 0.426676 | tig0040677:-8706 | None:intergenic |
| GTAAAAGCAAGACGCGTAAA+CGG | 0.427761 | tig0040677:+8757 | Msa1460120:CDS |
| TATGGCATCGCCATTCCCTT+TGG | 0.436234 | tig0040677:-8917 | None:intergenic |
| GGTTATGCACCCTTTAGAAT+AGG | 0.446599 | tig0040677:-7859 | None:intergenic |
| TACCCGCTTTCGTGCTTTGG+TGG | 0.452970 | tig0040677:-7818 | None:intergenic |
| TGTGTGGATCCTATTTCAAC+GGG | 0.470768 | tig0040677:-8796 | None:intergenic |
| AACTCCAGTTACTTCGCAAA+TGG | 0.476097 | tig0040677:-7115 | None:intergenic |
| ACCCGCTTTCGTGCTTTGGT+GGG | 0.499056 | tig0040677:-7817 | None:intergenic |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | tig0040677:-8412 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | tig0040677:+8413 | Msa1460120:CDS |
| GATCGTTGGCACGAGAAAGA+AGG | 0.509071 | tig0040677:-7089 | None:intergenic |
| TTATCTATCGAGCTATGAAA+AGG | 0.512086 | tig0040677:+8659 | Msa1460120:CDS |
| TTCGCAAATGGTAAGATCGT+TGG | 0.515541 | tig0040677:-7103 | None:intergenic |
| AAATGGATAAATCAGAACTA+AGG | 0.516319 | tig0040677:+7047 | None:intergenic |
| AGAACTAAGGCAAGATGAGA+TGG | 0.530899 | tig0040677:+7060 | Msa1460120:CDS |
| GTGGATGCTGCCAAAGGGAA+TGG | 0.532446 | tig0040677:+8907 | Msa1460120:CDS |
| TAATCGATTAGTTAACATGT+TGG | 0.538486 | tig0040677:+8591 | Msa1460120:intron |
| GGCGCATCCCGAAAACGTCC+AGG | 0.540732 | tig0040677:+8850 | Msa1460120:intron |
| AAAGGAAGAGACTCATAGAA+TGG | 0.548096 | tig0040677:+8945 | Msa1460120:CDS |
| TTGTGTGGATCCTATTTCAA+CGG | 0.548545 | tig0040677:-8797 | None:intergenic |
| ACCCACCAAAGCACGAAAGC+GGG | 0.549035 | tig0040677:+7816 | Msa1460120:CDS |
| ATCGAAAAGAAGCAAATGAA+AGG | 0.561694 | tig0040677:-9290 | None:intergenic |
| ATCGTTGGCACGAGAAAGAA+GGG | 0.564244 | tig0040677:-7088 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | tig0040677:+8340 | Msa1460120:intron |
| TCATGGGTTCTTCTCTCCAT+CGG | 0.567612 | tig0040677:-9459 | None:intergenic |
| TAACGGCGCTGTTGTTCCGA+TGG | 0.571426 | tig0040677:+9443 | Msa1460120:CDS |
| AATTAGTGGATGCTGCCAAA+GGG | 0.575951 | tig0040677:+8902 | Msa1460120:CDS |
| GAATTAGTGGATGCTGCCAA+AGG | 0.584526 | tig0040677:+8901 | Msa1460120:CDS |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | tig0040677:+8387 | Msa1460120:CDS |
| GACCCACCAAAGCACGAAAG+CGG | 0.587922 | tig0040677:+7815 | Msa1460120:CDS |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | tig0040677:+8341 | Msa1460120:intron |
| AGAGACTCATAGAATGGCAG+AGG | 0.593635 | tig0040677:+8951 | Msa1460120:CDS |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | tig0040677:+8426 | Msa1460120:CDS |
| TTGAAAGCCATATTTCGACC+TGG | 0.605724 | tig0040677:-8868 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | tig0040677:+8405 | Msa1460120:CDS |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | tig0040677:+8363 | Msa1460120:CDS |
| AAGTTTAGTAATGAGCATAA+CGG | 0.644237 | tig0040677:+9426 | Msa1460120:CDS |
| GTTAACCGTATTATGAAACA+CGG | 0.650772 | tig0040677:+8613 | Msa1460120:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | tig0040677:+8342 | Msa1460120:intron |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | tig0040677:-8381 | None:intergenic |
| TTTACGTCAAGCAATACGTG+GGG | 0.729232 | tig0040677:+8717 | Msa1460120:CDS |
| GTTGAAATAGGATCCACACA+AGG | 0.731975 | tig0040677:+8799 | Msa1460120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTTACATTTTTCA+GGG | - | tig0040677:7208-7227 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | - | tig0040677:7209-7228 | None:intergenic | 10.0% |
| !!! | AATGTAAATTTTTTTTTCTT+AGG | + | tig0040677:7213-7232 | Msa1460120:intron | 10.0% |
| !!! | AAAAAAATTTACATTTTTCA+GGG | - | tig0040677:7208-7227 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | - | tig0040677:7209-7228 | None:intergenic | 10.0% |
| !!! | AATGTAAATTTTTTTTTCTT+AGG | + | tig0040677:7213-7232 | Msa1460120:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7178-7197 | None:intergenic | 100.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7182-7201 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7178-7197 | None:intergenic | 100.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7182-7201 | None:intergenic | 100.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | + | tig0040677:7665-7684 | Msa1460120:intron | 15.0% |
| !!! | CATTTTTTTATAACTTATAG+GGG | - | tig0040677:8496-8515 | None:intergenic | 15.0% |
| !!! | CCATTTTTTTATAACTTATA+GGG | - | tig0040677:8497-8516 | None:intergenic | 15.0% |
| !!! | TCCATTTTTTTATAACTTAT+AGG | - | tig0040677:8498-8517 | None:intergenic | 15.0% |
| !! | AATAAATAAAGAGGAATATT+TGG | + | tig0040677:9172-9191 | Msa1460120:intron | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | + | tig0040677:7665-7684 | Msa1460120:intron | 15.0% |
| !!! | CATTTTTTTATAACTTATAG+GGG | - | tig0040677:8496-8515 | None:intergenic | 15.0% |
| !!! | CCATTTTTTTATAACTTATA+GGG | - | tig0040677:8497-8516 | None:intergenic | 15.0% |
| !!! | TCCATTTTTTTATAACTTAT+AGG | - | tig0040677:8498-8517 | None:intergenic | 15.0% |
| !! | AATAAATAAAGAGGAATATT+TGG | + | tig0040677:9172-9191 | Msa1460120:intron | 15.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | - | tig0040677:7391-7410 | None:intergenic | 20.0% |
| !! | ATCTATCTATAATGATCAAT+TGG | - | tig0040677:7760-7779 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | + | tig0040677:8026-8045 | Msa1460120:intron | 20.0% |
| !!! | AATTAGTTCTCGTTATTTTT+AGG | + | tig0040677:8071-8090 | Msa1460120:intron | 20.0% |
| !!! | ATTAGTTCTCGTTATTTTTA+GGG | + | tig0040677:8072-8091 | Msa1460120:intron | 20.0% |
| !! | CCCTATAAGTTATAAAAAAA+TGG | + | tig0040677:8494-8513 | Msa1460120:intron | 20.0% |
| !! | AGAATCAATAGAAAAAGAAT+CGG | + | tig0040677:9069-9088 | Msa1460120:intron | 20.0% |
| !! | TTGCTTAAGAATAAATAAAG+AGG | + | tig0040677:9163-9182 | Msa1460120:intron | 20.0% |
| !!! | AGGAATATTTGGTATTTTTT+TGG | + | tig0040677:9183-9202 | Msa1460120:intron | 20.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | - | tig0040677:7391-7410 | None:intergenic | 20.0% |
| !! | ATCTATCTATAATGATCAAT+TGG | - | tig0040677:7760-7779 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | + | tig0040677:8026-8045 | Msa1460120:intron | 20.0% |
| !!! | AATTAGTTCTCGTTATTTTT+AGG | + | tig0040677:8071-8090 | Msa1460120:intron | 20.0% |
| !!! | ATTAGTTCTCGTTATTTTTA+GGG | + | tig0040677:8072-8091 | Msa1460120:intron | 20.0% |
| !! | CCCTATAAGTTATAAAAAAA+TGG | + | tig0040677:8494-8513 | Msa1460120:intron | 20.0% |
| !! | AGAATCAATAGAAAAAGAAT+CGG | + | tig0040677:9069-9088 | Msa1460120:intron | 20.0% |
| !! | TTGCTTAAGAATAAATAAAG+AGG | + | tig0040677:9163-9182 | Msa1460120:intron | 20.0% |
| !!! | AGGAATATTTGGTATTTTTT+TGG | + | tig0040677:9183-9202 | Msa1460120:intron | 20.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | - | tig0040677:7152-7171 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | - | tig0040677:7153-7172 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | - | tig0040677:7289-7308 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | - | tig0040677:7290-7309 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | - | tig0040677:7291-7310 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | + | tig0040677:7392-7411 | Msa1460120:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | - | tig0040677:7397-7416 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | - | tig0040677:7534-7553 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | + | tig0040677:7773-7792 | Msa1460120:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | + | tig0040677:7849-7868 | Msa1460120:CDS | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | + | tig0040677:7850-7869 | Msa1460120:CDS | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | + | tig0040677:7917-7936 | Msa1460120:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | + | tig0040677:7927-7946 | Msa1460120:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | - | tig0040677:7990-8009 | None:intergenic | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | - | tig0040677:8126-8145 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | - | tig0040677:8326-8345 | None:intergenic | 25.0% |
| !! | GGGGCTAAAATAATTTATTT+TGG | - | tig0040677:8477-8496 | None:intergenic | 25.0% |
| ! | ACTAATCGATTACGATAAAT+TGG | - | tig0040677:8583-8602 | None:intergenic | 25.0% |
| !! | TAATCGATTAGTTAACATGT+TGG | + | tig0040677:8591-8610 | Msa1460120:intron | 25.0% |
| !! | TTTTTCCGTGTTTCATAATA+CGG | - | tig0040677:8621-8640 | None:intergenic | 25.0% |
| !! | GATTCTTTTCCAATTATGTA+TGG | - | tig0040677:9055-9074 | None:intergenic | 25.0% |
| ! | GAAGAATTAGACCAAAAATT+AGG | - | tig0040677:9342-9361 | None:intergenic | 25.0% |
| ! | AAGTTTAGTAATGAGCATAA+CGG | + | tig0040677:9426-9445 | Msa1460120:CDS | 25.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | - | tig0040677:7152-7171 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | - | tig0040677:7153-7172 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | - | tig0040677:7289-7308 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | - | tig0040677:7290-7309 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | - | tig0040677:7291-7310 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | + | tig0040677:7392-7411 | Msa1460120:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | - | tig0040677:7397-7416 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | - | tig0040677:7534-7553 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | + | tig0040677:7773-7792 | Msa1460120:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | + | tig0040677:7849-7868 | Msa1460120:CDS | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | + | tig0040677:7850-7869 | Msa1460120:CDS | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | + | tig0040677:7917-7936 | Msa1460120:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | + | tig0040677:7927-7946 | Msa1460120:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | - | tig0040677:7990-8009 | None:intergenic | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | - | tig0040677:8126-8145 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | - | tig0040677:8326-8345 | None:intergenic | 25.0% |
| !! | GGGGCTAAAATAATTTATTT+TGG | - | tig0040677:8477-8496 | None:intergenic | 25.0% |
| ! | ACTAATCGATTACGATAAAT+TGG | - | tig0040677:8583-8602 | None:intergenic | 25.0% |
| !! | TAATCGATTAGTTAACATGT+TGG | + | tig0040677:8591-8610 | Msa1460120:intron | 25.0% |
| !! | TTTTTCCGTGTTTCATAATA+CGG | - | tig0040677:8621-8640 | None:intergenic | 25.0% |
| !! | GATTCTTTTCCAATTATGTA+TGG | - | tig0040677:9055-9074 | None:intergenic | 25.0% |
| ! | GAAGAATTAGACCAAAAATT+AGG | - | tig0040677:9342-9361 | None:intergenic | 25.0% |
| ! | AAGTTTAGTAATGAGCATAA+CGG | + | tig0040677:9426-9445 | Msa1460120:CDS | 25.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | - | tig0040677:7147-7166 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | - | tig0040677:7202-7221 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | + | tig0040677:7257-7276 | Msa1460120:intron | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | + | tig0040677:7334-7353 | Msa1460120:intron | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | - | tig0040677:7906-7925 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | - | tig0040677:7907-7926 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | + | tig0040677:7905-7924 | Msa1460120:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | - | tig0040677:7922-7941 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | + | tig0040677:7920-7939 | Msa1460120:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | + | tig0040677:7926-7945 | Msa1460120:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | - | tig0040677:8316-8335 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | + | tig0040677:8340-8359 | Msa1460120:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | + | tig0040677:8442-8461 | Msa1460120:intron | 30.0% |
| ! | ATAAATTGGATCGGATTTTG+CGG | - | tig0040677:8569-8588 | None:intergenic | 30.0% |
| TCGATTACGATAAATTGGAT+CGG | - | tig0040677:8578-8597 | None:intergenic | 30.0% | |
| GTTAACCGTATTATGAAACA+CGG | + | tig0040677:8613-8632 | Msa1460120:CDS | 30.0% | |
| GAAACACGGAAAAAAATCAT+TGG | + | tig0040677:8627-8646 | Msa1460120:CDS | 30.0% | |
| TTATCTATCGAGCTATGAAA+AGG | + | tig0040677:8659-8678 | Msa1460120:CDS | 30.0% | |
| !! | TCTTGCTTTTACTGCTATAT+CGG | - | tig0040677:8749-8768 | None:intergenic | 30.0% |
| CAAATTAAGTTCCGAATTAG+TGG | + | tig0040677:8888-8907 | Msa1460120:CDS | 30.0% | |
| ACATAGACCTATGTTATGTA+TGG | + | tig0040677:9027-9046 | Msa1460120:intron | 30.0% | |
| TATGGATCCATACATAACAT+AGG | - | tig0040677:9037-9056 | None:intergenic | 30.0% | |
| TGTATGGATCCATACATAAT+TGG | + | tig0040677:9043-9062 | Msa1460120:intron | 30.0% | |
| GAAAGACGAAATAGAAATGA+TGG | + | tig0040677:9117-9136 | Msa1460120:intron | 30.0% | |
| ATCGAAAAGAAGCAAATGAA+AGG | - | tig0040677:9293-9312 | None:intergenic | 30.0% | |
| ! | TTTCATTTGCTTCTTTTCGA+TGG | + | tig0040677:9292-9311 | Msa1460120:CDS | 30.0% |
| !!! | CGATGGAAGTTTTATTTTTC+CGG | + | tig0040677:9309-9328 | Msa1460120:CDS | 30.0% |
| CCAAAAATTAGGATCAATTC+CGG | - | tig0040677:9331-9350 | None:intergenic | 30.0% | |
| ! | AGATAGATCTTTTTGATCAG+AGG | - | tig0040677:9383-9402 | None:intergenic | 30.0% |
| CTGATCAAAAAGATCTATCT+TGG | + | tig0040677:9383-9402 | Msa1460120:CDS | 30.0% | |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | - | tig0040677:7147-7166 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | - | tig0040677:7202-7221 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | + | tig0040677:7257-7276 | Msa1460120:intron | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | + | tig0040677:7334-7353 | Msa1460120:intron | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | - | tig0040677:7906-7925 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | - | tig0040677:7907-7926 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | + | tig0040677:7905-7924 | Msa1460120:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | - | tig0040677:7922-7941 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | + | tig0040677:7920-7939 | Msa1460120:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | + | tig0040677:7926-7945 | Msa1460120:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | - | tig0040677:8316-8335 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | + | tig0040677:8340-8359 | Msa1460120:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | + | tig0040677:8442-8461 | Msa1460120:intron | 30.0% |
| ! | ATAAATTGGATCGGATTTTG+CGG | - | tig0040677:8569-8588 | None:intergenic | 30.0% |
| TCGATTACGATAAATTGGAT+CGG | - | tig0040677:8578-8597 | None:intergenic | 30.0% | |
| GTTAACCGTATTATGAAACA+CGG | + | tig0040677:8613-8632 | Msa1460120:CDS | 30.0% | |
| GAAACACGGAAAAAAATCAT+TGG | + | tig0040677:8627-8646 | Msa1460120:CDS | 30.0% | |
| TTATCTATCGAGCTATGAAA+AGG | + | tig0040677:8659-8678 | Msa1460120:CDS | 30.0% | |
| !! | TCTTGCTTTTACTGCTATAT+CGG | - | tig0040677:8749-8768 | None:intergenic | 30.0% |
| CAAATTAAGTTCCGAATTAG+TGG | + | tig0040677:8888-8907 | Msa1460120:CDS | 30.0% | |
| ACATAGACCTATGTTATGTA+TGG | + | tig0040677:9027-9046 | Msa1460120:intron | 30.0% | |
| TATGGATCCATACATAACAT+AGG | - | tig0040677:9037-9056 | None:intergenic | 30.0% | |
| TGTATGGATCCATACATAAT+TGG | + | tig0040677:9043-9062 | Msa1460120:intron | 30.0% | |
| GAAAGACGAAATAGAAATGA+TGG | + | tig0040677:9117-9136 | Msa1460120:intron | 30.0% | |
| ATCGAAAAGAAGCAAATGAA+AGG | - | tig0040677:9293-9312 | None:intergenic | 30.0% | |
| ! | TTTCATTTGCTTCTTTTCGA+TGG | + | tig0040677:9292-9311 | Msa1460120:CDS | 30.0% |
| !!! | CGATGGAAGTTTTATTTTTC+CGG | + | tig0040677:9309-9328 | Msa1460120:CDS | 30.0% |
| CCAAAAATTAGGATCAATTC+CGG | - | tig0040677:9331-9350 | None:intergenic | 30.0% | |
| ! | AGATAGATCTTTTTGATCAG+AGG | - | tig0040677:9383-9402 | None:intergenic | 30.0% |
| CTGATCAAAAAGATCTATCT+TGG | + | tig0040677:9383-9402 | Msa1460120:CDS | 30.0% | |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | - | tig0040677:7201-7220 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | + | tig0040677:7321-7340 | Msa1460120:intron | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | - | tig0040677:7327-7346 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | - | tig0040677:7425-7444 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | + | tig0040677:7704-7723 | Msa1460120:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | - | tig0040677:7732-7751 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | + | tig0040677:7904-7923 | Msa1460120:intron | 35.0% |
| !!! | GTTCTCGTTATTTTTAGGGA+AGG | + | tig0040677:8076-8095 | Msa1460120:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | + | tig0040677:8128-8147 | Msa1460120:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | - | tig0040677:8156-8175 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | + | tig0040677:8158-8177 | Msa1460120:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | - | tig0040677:8226-8245 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | - | tig0040677:8236-8255 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | - | tig0040677:8237-8256 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | + | tig0040677:8294-8313 | Msa1460120:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | - | tig0040677:8315-8334 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | + | tig0040677:8339-8358 | Msa1460120:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | + | tig0040677:8341-8360 | Msa1460120:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | - | tig0040677:8443-8462 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | + | tig0040677:8441-8460 | Msa1460120:intron | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | + | tig0040677:8443-8462 | Msa1460120:intron | 35.0% |
| ! | TTTTACGTCAAGCAATACGT+GGG | + | tig0040677:8716-8735 | Msa1460120:CDS | 35.0% |
| !! | CTTGCTTTTACTGCTATATC+GGG | - | tig0040677:8748-8767 | None:intergenic | 35.0% |
| TTGTGTGGATCCTATTTCAA+CGG | - | tig0040677:8800-8819 | None:intergenic | 35.0% | |
| AAAGGAAGAGACTCATAGAA+TGG | + | tig0040677:8945-8964 | Msa1460120:CDS | 35.0% | |
| ! | ATTTTCGTTAATCCATGAGC+AGG | + | tig0040677:8992-9011 | Msa1460120:intron | 35.0% |
| ! | CCGGAATTGATCCTAATTTT+TGG | + | tig0040677:9328-9347 | Msa1460120:CDS | 35.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | - | tig0040677:7201-7220 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | + | tig0040677:7321-7340 | Msa1460120:intron | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | - | tig0040677:7327-7346 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | - | tig0040677:7425-7444 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | + | tig0040677:7704-7723 | Msa1460120:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | - | tig0040677:7732-7751 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | + | tig0040677:7904-7923 | Msa1460120:intron | 35.0% |
| !!! | GTTCTCGTTATTTTTAGGGA+AGG | + | tig0040677:8076-8095 | Msa1460120:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | + | tig0040677:8128-8147 | Msa1460120:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | - | tig0040677:8156-8175 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | + | tig0040677:8158-8177 | Msa1460120:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | - | tig0040677:8226-8245 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | - | tig0040677:8236-8255 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | - | tig0040677:8237-8256 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | + | tig0040677:8294-8313 | Msa1460120:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | - | tig0040677:8315-8334 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | + | tig0040677:8339-8358 | Msa1460120:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | + | tig0040677:8341-8360 | Msa1460120:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | - | tig0040677:8443-8462 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | + | tig0040677:8441-8460 | Msa1460120:intron | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | + | tig0040677:8443-8462 | Msa1460120:intron | 35.0% |
| ! | TTTTACGTCAAGCAATACGT+GGG | + | tig0040677:8716-8735 | Msa1460120:CDS | 35.0% |
| !! | CTTGCTTTTACTGCTATATC+GGG | - | tig0040677:8748-8767 | None:intergenic | 35.0% |
| TTGTGTGGATCCTATTTCAA+CGG | - | tig0040677:8800-8819 | None:intergenic | 35.0% | |
| AAAGGAAGAGACTCATAGAA+TGG | + | tig0040677:8945-8964 | Msa1460120:CDS | 35.0% | |
| ! | ATTTTCGTTAATCCATGAGC+AGG | + | tig0040677:8992-9011 | Msa1460120:intron | 35.0% |
| ! | CCGGAATTGATCCTAATTTT+TGG | + | tig0040677:9328-9347 | Msa1460120:CDS | 35.0% |
| AGAACTAAGGCAAGATGAGA+TGG | + | tig0040677:7060-7079 | Msa1460120:CDS | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | - | tig0040677:7106-7125 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | + | tig0040677:7111-7130 | Msa1460120:intron | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | - | tig0040677:7118-7137 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | - | tig0040677:7200-7219 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | - | tig0040677:7320-7339 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | - | tig0040677:7374-7393 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | - | tig0040677:7378-7397 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | - | tig0040677:7499-7518 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | + | tig0040677:7498-7517 | Msa1460120:intron | 40.0% | |
| AGCGGGTATCTTTCACAAAA+AGG | + | tig0040677:7833-7852 | Msa1460120:CDS | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | - | tig0040677:7862-7881 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | - | tig0040677:7883-7902 | None:intergenic | 40.0% | |
| !!! | CGTTATTTTTAGGGAAGGAG+TGG | + | tig0040677:8081-8100 | Msa1460120:intron | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | - | tig0040677:8235-8254 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | - | tig0040677:8246-8265 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | - | tig0040677:8256-8275 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | - | tig0040677:8286-8305 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | + | tig0040677:8300-8319 | Msa1460120:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | + | tig0040677:8342-8361 | Msa1460120:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | - | tig0040677:8384-8403 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | + | tig0040677:8387-8406 | Msa1460120:CDS | 40.0% | |
| GCTTGACGTAAAACAGATAG+TGG | - | tig0040677:8709-8728 | None:intergenic | 40.0% | |
| ! | GTTTTACGTCAAGCAATACG+TGG | + | tig0040677:8715-8734 | Msa1460120:CDS | 40.0% |
| TTTACGTCAAGCAATACGTG+GGG | + | tig0040677:8717-8736 | Msa1460120:CDS | 40.0% | |
| GTAAAAGCAAGACGCGTAAA+CGG | + | tig0040677:8757-8776 | Msa1460120:CDS | 40.0% | |
| CATCAAGTTCCCGTTGAAAT+AGG | + | tig0040677:8787-8806 | Msa1460120:CDS | 40.0% | |
| TGTGTGGATCCTATTTCAAC+GGG | - | tig0040677:8799-8818 | None:intergenic | 40.0% | |
| GTTGAAATAGGATCCACACA+AGG | + | tig0040677:8799-8818 | Msa1460120:CDS | 40.0% | |
| ! | CTTGCCATTCGTTGGTTATT+AGG | + | tig0040677:8829-8848 | Msa1460120:intron | 40.0% |
| ! | TATTTCGACCTGGACGTTTT+CGG | - | tig0040677:8861-8880 | None:intergenic | 40.0% |
| AAAACGTCCAGGTCGAAATA+TGG | + | tig0040677:8861-8880 | Msa1460120:CDS | 40.0% | |
| TTGAAAGCCATATTTCGACC+TGG | - | tig0040677:8871-8890 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | - | tig0040677:8902-8921 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | + | tig0040677:8902-8921 | Msa1460120:CDS | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | - | tig0040677:8938-8957 | None:intergenic | 40.0% |
| GTGTATATAGATCCTGCTCA+TGG | - | tig0040677:9007-9026 | None:intergenic | 40.0% | |
| ! | ATGGCTCAACTAAGCACTTT+TGG | + | tig0040677:9136-9155 | Msa1460120:intron | 40.0% |
| ! | TGGCTCAACTAAGCACTTTT+GGG | + | tig0040677:9137-9156 | Msa1460120:intron | 40.0% |
| AGAACTAAGGCAAGATGAGA+TGG | + | tig0040677:7060-7079 | Msa1460120:CDS | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | - | tig0040677:7106-7125 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | + | tig0040677:7111-7130 | Msa1460120:intron | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | - | tig0040677:7118-7137 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | - | tig0040677:7200-7219 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | - | tig0040677:7320-7339 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | - | tig0040677:7374-7393 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | - | tig0040677:7378-7397 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | - | tig0040677:7499-7518 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | + | tig0040677:7498-7517 | Msa1460120:intron | 40.0% | |
| AGCGGGTATCTTTCACAAAA+AGG | + | tig0040677:7833-7852 | Msa1460120:CDS | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | - | tig0040677:7862-7881 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | - | tig0040677:7883-7902 | None:intergenic | 40.0% | |
| !!! | CGTTATTTTTAGGGAAGGAG+TGG | + | tig0040677:8081-8100 | Msa1460120:intron | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | - | tig0040677:8235-8254 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | - | tig0040677:8246-8265 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | - | tig0040677:8256-8275 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | - | tig0040677:8286-8305 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | + | tig0040677:8300-8319 | Msa1460120:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | + | tig0040677:8342-8361 | Msa1460120:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | - | tig0040677:8384-8403 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | + | tig0040677:8387-8406 | Msa1460120:CDS | 40.0% | |
| GCTTGACGTAAAACAGATAG+TGG | - | tig0040677:8709-8728 | None:intergenic | 40.0% | |
| ! | GTTTTACGTCAAGCAATACG+TGG | + | tig0040677:8715-8734 | Msa1460120:CDS | 40.0% |
| TTTACGTCAAGCAATACGTG+GGG | + | tig0040677:8717-8736 | Msa1460120:CDS | 40.0% | |
| GTAAAAGCAAGACGCGTAAA+CGG | + | tig0040677:8757-8776 | Msa1460120:CDS | 40.0% | |
| CATCAAGTTCCCGTTGAAAT+AGG | + | tig0040677:8787-8806 | Msa1460120:CDS | 40.0% | |
| TGTGTGGATCCTATTTCAAC+GGG | - | tig0040677:8799-8818 | None:intergenic | 40.0% | |
| GTTGAAATAGGATCCACACA+AGG | + | tig0040677:8799-8818 | Msa1460120:CDS | 40.0% | |
| ! | CTTGCCATTCGTTGGTTATT+AGG | + | tig0040677:8829-8848 | Msa1460120:intron | 40.0% |
| ! | TATTTCGACCTGGACGTTTT+CGG | - | tig0040677:8861-8880 | None:intergenic | 40.0% |
| AAAACGTCCAGGTCGAAATA+TGG | + | tig0040677:8861-8880 | Msa1460120:CDS | 40.0% | |
| TTGAAAGCCATATTTCGACC+TGG | - | tig0040677:8871-8890 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | - | tig0040677:8902-8921 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | + | tig0040677:8902-8921 | Msa1460120:CDS | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | - | tig0040677:8938-8957 | None:intergenic | 40.0% |
| GTGTATATAGATCCTGCTCA+TGG | - | tig0040677:9007-9026 | None:intergenic | 40.0% | |
| ! | ATGGCTCAACTAAGCACTTT+TGG | + | tig0040677:9136-9155 | Msa1460120:intron | 40.0% |
| ! | TGGCTCAACTAAGCACTTTT+GGG | + | tig0040677:9137-9156 | Msa1460120:intron | 40.0% |
| ATCGTTGGCACGAGAAAGAA+GGG | - | tig0040677:7091-7110 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | - | tig0040677:7199-7218 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | + | tig0040677:7412-7431 | Msa1460120:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | + | tig0040677:7416-7435 | Msa1460120:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | - | tig0040677:7422-7441 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | - | tig0040677:7470-7489 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | - | tig0040677:7471-7490 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | - | tig0040677:7472-7491 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | + | tig0040677:7471-7490 | Msa1460120:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | + | tig0040677:7937-7956 | Msa1460120:intron | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | + | tig0040677:8098-8117 | Msa1460120:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | + | tig0040677:8171-8190 | Msa1460120:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | + | tig0040677:8346-8365 | Msa1460120:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | + | tig0040677:8347-8366 | Msa1460120:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | + | tig0040677:8363-8382 | Msa1460120:CDS | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | - | tig0040677:8415-8434 | None:intergenic | 45.0% | |
| ! | TCCCTTTTACGCTCATGTCA+CGG | + | tig0040677:8521-8540 | Msa1460120:intron | 45.0% |
| !! | GAAAAGCACTTGCCATTCGT+TGG | + | tig0040677:8821-8840 | Msa1460120:intron | 45.0% |
| TGCGCCTAATAACCAACGAA+TGG | - | tig0040677:8836-8855 | None:intergenic | 45.0% | |
| ! | ATTTCGACCTGGACGTTTTC+GGG | - | tig0040677:8860-8879 | None:intergenic | 45.0% |
| ! | GAATTAGTGGATGCTGCCAA+AGG | + | tig0040677:8901-8920 | Msa1460120:CDS | 45.0% |
| AGAGACTCATAGAATGGCAG+AGG | + | tig0040677:8951-8970 | Msa1460120:CDS | 45.0% | |
| ! | GGCTCAACTAAGCACTTTTG+GGG | + | tig0040677:9138-9157 | Msa1460120:intron | 45.0% |
| TCATGGGTTCTTCTCTCCAT+CGG | - | tig0040677:9462-9481 | None:intergenic | 45.0% | |
| ATCGTTGGCACGAGAAAGAA+GGG | - | tig0040677:7091-7110 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | - | tig0040677:7199-7218 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | + | tig0040677:7412-7431 | Msa1460120:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | + | tig0040677:7416-7435 | Msa1460120:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | - | tig0040677:7422-7441 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | - | tig0040677:7470-7489 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | - | tig0040677:7471-7490 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | - | tig0040677:7472-7491 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | + | tig0040677:7471-7490 | Msa1460120:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | + | tig0040677:7937-7956 | Msa1460120:intron | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | + | tig0040677:8098-8117 | Msa1460120:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | + | tig0040677:8171-8190 | Msa1460120:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | + | tig0040677:8346-8365 | Msa1460120:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | + | tig0040677:8347-8366 | Msa1460120:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | + | tig0040677:8363-8382 | Msa1460120:CDS | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | - | tig0040677:8415-8434 | None:intergenic | 45.0% | |
| ! | TCCCTTTTACGCTCATGTCA+CGG | + | tig0040677:8521-8540 | Msa1460120:intron | 45.0% |
| !! | GAAAAGCACTTGCCATTCGT+TGG | + | tig0040677:8821-8840 | Msa1460120:intron | 45.0% |
| TGCGCCTAATAACCAACGAA+TGG | - | tig0040677:8836-8855 | None:intergenic | 45.0% | |
| ! | ATTTCGACCTGGACGTTTTC+GGG | - | tig0040677:8860-8879 | None:intergenic | 45.0% |
| ! | GAATTAGTGGATGCTGCCAA+AGG | + | tig0040677:8901-8920 | Msa1460120:CDS | 45.0% |
| AGAGACTCATAGAATGGCAG+AGG | + | tig0040677:8951-8970 | Msa1460120:CDS | 45.0% | |
| ! | GGCTCAACTAAGCACTTTTG+GGG | + | tig0040677:9138-9157 | Msa1460120:intron | 45.0% |
| TCATGGGTTCTTCTCTCCAT+CGG | - | tig0040677:9462-9481 | None:intergenic | 45.0% | |
| GATCGTTGGCACGAGAAAGA+AGG | - | tig0040677:7092-7111 | None:intergenic | 50.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | - | tig0040677:7198-7217 | None:intergenic | 50.0% |
| AGATACCCGCTTTCGTGCTT+TGG | - | tig0040677:7824-7843 | None:intergenic | 50.0% | |
| ! | CTAAAGGGTGCATAACCGCA+TGG | + | tig0040677:7865-7884 | Msa1460120:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | + | tig0040677:8140-8159 | Msa1460120:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | + | tig0040677:8179-8198 | Msa1460120:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | - | tig0040677:8271-8290 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | + | tig0040677:8353-8372 | Msa1460120:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | - | tig0040677:8416-8435 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | + | tig0040677:8413-8432 | Msa1460120:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | + | tig0040677:8426-8445 | Msa1460120:CDS | 50.0% | |
| GCCGTGACATGAGCGTAAAA+GGG | - | tig0040677:8525-8544 | None:intergenic | 50.0% | |
| ! | GGCAAGTGCTTTTCCTTGTG+TGG | - | tig0040677:8815-8834 | None:intergenic | 50.0% |
| TATGGCATCGCCATTCCCTT+TGG | - | tig0040677:8920-8939 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | + | tig0040677:8927-8946 | Msa1460120:CDS | 50.0% | |
| GATCGTTGGCACGAGAAAGA+AGG | - | tig0040677:7092-7111 | None:intergenic | 50.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | - | tig0040677:7198-7217 | None:intergenic | 50.0% |
| AGATACCCGCTTTCGTGCTT+TGG | - | tig0040677:7824-7843 | None:intergenic | 50.0% | |
| ! | CTAAAGGGTGCATAACCGCA+TGG | + | tig0040677:7865-7884 | Msa1460120:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | + | tig0040677:8140-8159 | Msa1460120:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | + | tig0040677:8179-8198 | Msa1460120:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | - | tig0040677:8271-8290 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | + | tig0040677:8353-8372 | Msa1460120:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | - | tig0040677:8416-8435 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | + | tig0040677:8413-8432 | Msa1460120:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | + | tig0040677:8426-8445 | Msa1460120:CDS | 50.0% | |
| GCCGTGACATGAGCGTAAAA+GGG | - | tig0040677:8525-8544 | None:intergenic | 50.0% | |
| ! | GGCAAGTGCTTTTCCTTGTG+TGG | - | tig0040677:8815-8834 | None:intergenic | 50.0% |
| TATGGCATCGCCATTCCCTT+TGG | - | tig0040677:8920-8939 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | + | tig0040677:8927-8946 | Msa1460120:CDS | 50.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | - | tig0040677:7196-7215 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | - | tig0040677:7197-7216 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | + | tig0040677:7815-7834 | Msa1460120:CDS | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | + | tig0040677:7816-7835 | Msa1460120:CDS | 55.0% | |
| ACCCGCTTTCGTGCTTTGGT+GGG | - | tig0040677:7820-7839 | None:intergenic | 55.0% | |
| TACCCGCTTTCGTGCTTTGG+TGG | - | tig0040677:7821-7840 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | + | tig0040677:8267-8286 | Msa1460120:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | + | tig0040677:8405-8424 | Msa1460120:CDS | 55.0% | |
| CGCCGTGACATGAGCGTAAA+AGG | - | tig0040677:8526-8545 | None:intergenic | 55.0% | |
| TTTACGCTCATGTCACGGCG+AGG | + | tig0040677:8526-8545 | Msa1460120:intron | 55.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | + | tig0040677:8907-8926 | Msa1460120:CDS | 55.0% | |
| TAACGGCGCTGTTGTTCCGA+TGG | + | tig0040677:9443-9462 | Msa1460120:CDS | 55.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | - | tig0040677:7196-7215 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | - | tig0040677:7197-7216 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | + | tig0040677:7815-7834 | Msa1460120:CDS | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | + | tig0040677:7816-7835 | Msa1460120:CDS | 55.0% | |
| ACCCGCTTTCGTGCTTTGGT+GGG | - | tig0040677:7820-7839 | None:intergenic | 55.0% | |
| TACCCGCTTTCGTGCTTTGG+TGG | - | tig0040677:7821-7840 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | + | tig0040677:8267-8286 | Msa1460120:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | + | tig0040677:8405-8424 | Msa1460120:CDS | 55.0% | |
| CGCCGTGACATGAGCGTAAA+AGG | - | tig0040677:8526-8545 | None:intergenic | 55.0% | |
| TTTACGCTCATGTCACGGCG+AGG | + | tig0040677:8526-8545 | Msa1460120:intron | 55.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | + | tig0040677:8907-8926 | Msa1460120:CDS | 55.0% | |
| TAACGGCGCTGTTGTTCCGA+TGG | + | tig0040677:9443-9462 | Msa1460120:CDS | 55.0% | |
| !!! | TTTTTCAGGGTCTCGGGGGG+GGG | - | tig0040677:7195-7214 | None:intergenic | 60.0% |
| GCGAGGAGAAAGGCAGCAAG+AGG | - | tig0040677:7448-7467 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | - | tig0040677:7465-7484 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | + | tig0040677:7463-7482 | Msa1460120:intron | 60.0% | |
| !!! | TTTTTCAGGGTCTCGGGGGG+GGG | - | tig0040677:7195-7214 | None:intergenic | 60.0% |
| GCGAGGAGAAAGGCAGCAAG+AGG | - | tig0040677:7448-7467 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | - | tig0040677:7465-7484 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | + | tig0040677:7463-7482 | Msa1460120:intron | 60.0% | |
| !! | TTTTCAGGGTCTCGGGGGGG+GGG | - | tig0040677:7194-7213 | None:intergenic | 65.0% |
| TCGCTGTGGGGCGAGGAGAA+AGG | - | tig0040677:7458-7477 | None:intergenic | 65.0% | |
| GGCGCATCCCGAAAACGTCC+AGG | + | tig0040677:8850-8869 | Msa1460120:intron | 65.0% | |
| !! | TTTTCAGGGTCTCGGGGGGG+GGG | - | tig0040677:7194-7213 | None:intergenic | 65.0% |
| TCGCTGTGGGGCGAGGAGAA+AGG | - | tig0040677:7458-7477 | None:intergenic | 65.0% | |
| GGCGCATCCCGAAAACGTCC+AGG | + | tig0040677:8850-8869 | Msa1460120:intron | 65.0% | |
| TTTCAGGGTCTCGGGGGGGG+GGG | - | tig0040677:7193-7212 | None:intergenic | 70.0% | |
| TTTCAGGGTCTCGGGGGGGG+GGG | - | tig0040677:7193-7212 | None:intergenic | 70.0% | |
| TTCAGGGTCTCGGGGGGGGG+GGG | - | tig0040677:7192-7211 | None:intergenic | 75.0% | |
| TTCAGGGTCTCGGGGGGGGG+GGG | - | tig0040677:7192-7211 | None:intergenic | 75.0% | |
| ! | TCAGGGTCTCGGGGGGGGGG+GGG | - | tig0040677:7191-7210 | None:intergenic | 80.0% |
| ! | TCAGGGTCTCGGGGGGGGGG+GGG | - | tig0040677:7191-7210 | None:intergenic | 80.0% |
| ! | AGGGTCTCGGGGGGGGGGGG+GGG | - | tig0040677:7189-7208 | None:intergenic | 85.0% |
| ! | CAGGGTCTCGGGGGGGGGGG+GGG | - | tig0040677:7190-7209 | None:intergenic | 85.0% |
| ! | AGGGTCTCGGGGGGGGGGGG+GGG | - | tig0040677:7189-7208 | None:intergenic | 85.0% |
| ! | CAGGGTCTCGGGGGGGGGGG+GGG | - | tig0040677:7190-7209 | None:intergenic | 85.0% |
| ! | TCTCGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7185-7204 | None:intergenic | 90.0% |
| ! | GTCTCGGGGGGGGGGGGGGG+GGG | - | tig0040677:7186-7205 | None:intergenic | 90.0% |
| ! | GGTCTCGGGGGGGGGGGGGG+GGG | - | tig0040677:7187-7206 | None:intergenic | 90.0% |
| ! | GGGTCTCGGGGGGGGGGGGG+GGG | - | tig0040677:7188-7207 | None:intergenic | 90.0% |
| ! | TCTCGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7185-7204 | None:intergenic | 90.0% |
| ! | GTCTCGGGGGGGGGGGGGGG+GGG | - | tig0040677:7186-7205 | None:intergenic | 90.0% |
| ! | GGTCTCGGGGGGGGGGGGGG+GGG | - | tig0040677:7187-7206 | None:intergenic | 90.0% |
| ! | GGGTCTCGGGGGGGGGGGGG+GGG | - | tig0040677:7188-7207 | None:intergenic | 90.0% |
| ! | TCGGGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7183-7202 | None:intergenic | 95.0% |
| ! | CTCGGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7184-7203 | None:intergenic | 95.0% |
| ! | TCGGGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7183-7202 | None:intergenic | 95.0% |
| ! | CTCGGGGGGGGGGGGGGGGG+GGG | - | tig0040677:7184-7203 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0040677 | gene | 7049 | 9483 | 7049 | ID=Msa1460120;Name=Msa1460120 |
| tig0040677 | mRNA | 7049 | 9483 | 7049 | ID=Msa1460120-mRNA-1;Parent=Msa1460120;Name=Msa1460120-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|0|0.16|6|0|275 |
| tig0040677 | exon | 7049 | 7125 | 7049 | ID=Msa1460120-mRNA-1:exon:22576;Parent=Msa1460120-mRNA-1 |
| tig0040677 | exon | 7795 | 7871 | 7795 | ID=Msa1460120-mRNA-1:exon:22577;Parent=Msa1460120-mRNA-1 |
| tig0040677 | exon | 8355 | 8447 | 8355 | ID=Msa1460120-mRNA-1:exon:22578;Parent=Msa1460120-mRNA-1 |
| tig0040677 | exon | 8602 | 8838 | 8602 | ID=Msa1460120-mRNA-1:exon:22579;Parent=Msa1460120-mRNA-1 |
| tig0040677 | exon | 8851 | 8997 | 8851 | ID=Msa1460120-mRNA-1:exon:22580;Parent=Msa1460120-mRNA-1 |
| tig0040677 | exon | 9290 | 9483 | 9290 | ID=Msa1460120-mRNA-1:exon:22581;Parent=Msa1460120-mRNA-1 |
| tig0040677 | CDS | 7049 | 7125 | 7049 | ID=Msa1460120-mRNA-1:cds;Parent=Msa1460120-mRNA-1 |
| tig0040677 | CDS | 7795 | 7871 | 7795 | ID=Msa1460120-mRNA-1:cds;Parent=Msa1460120-mRNA-1 |
| tig0040677 | CDS | 8355 | 8447 | 8355 | ID=Msa1460120-mRNA-1:cds;Parent=Msa1460120-mRNA-1 |
| tig0040677 | CDS | 8602 | 8838 | 8602 | ID=Msa1460120-mRNA-1:cds;Parent=Msa1460120-mRNA-1 |
| tig0040677 | CDS | 8851 | 8997 | 8851 | ID=Msa1460120-mRNA-1:cds;Parent=Msa1460120-mRNA-1 |
| tig0040677 | CDS | 9290 | 9483 | 9290 | ID=Msa1460120-mRNA-1:cds;Parent=Msa1460120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
