AlfalfaGEDB | Msa0269140

M. sativa cultivar zhongmu-4 / Msa0269140

KEGG: K02992
GO: GO:0000028 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009579 GO:0009987 GO:0010467 GO:0016020 GO:0016043 GO:0019538 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042254 GO:0042255 GO:0042274 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF00177.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0269140	YP_009141653.1	100.000	131	0	0	1	131	25	155	1.21e-90	269

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0269140	sp\|P07135\|RR7_SOYBN	96.947	131	4	0	1	131	25	155	1.13e-90	262

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0269140	A0A0F6NLW0	100.000	131	0	0	1	131	25	155	5.78e-91	269

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0095190	Msa0269140	0.801882	7.301631e-49	-8.615850e-47
Msa0202640	Msa0269140	0.812648	3.814840e-51	-8.615850e-47
Msa0263770	Msa0269140	0.846236	2.466092e-59	-8.615850e-47
Msa0268250	Msa0269140	0.846063	2.747410e-59	-8.615850e-47
Msa0268260	Msa0269140	0.949932	4.656000e-108	-8.615850e-47
Msa0268270	Msa0269140	0.880420	5.572253e-70	-8.615850e-47
Msa0268300	Msa0269140	0.878409	2.875485e-69	-8.615850e-47
Msa0268310	Msa0269140	0.854882	9.151718e-62	-8.615850e-47
Msa0268390	Msa0269140	0.810216	1.287364e-50	-8.615850e-47
Msa0268410	Msa0269140	0.813633	2.318388e-51	-8.615850e-47
Msa0268550	Msa0269140	0.813453	2.540012e-51	-8.615850e-47
Msa0268560	Msa0269140	0.840979	6.274041e-58	-8.615850e-47
Msa0268570	Msa0269140	0.809865	1.532099e-50	-8.615850e-47
Msa0268580	Msa0269140	0.822720	2.036601e-53	-8.615850e-47
Msa0268630	Msa0269140	0.825568	4.367351e-54	-8.615850e-47
Msa0268640	Msa0269140	0.805469	1.315032e-49	-8.615850e-47
Msa0268740	Msa0269140	0.838036	3.650390e-57	-8.615850e-47
Msa0268750	Msa0269140	0.821064	4.923361e-53	-8.615850e-47
Msa0268760	Msa0269140	0.814725	1.331250e-51	-8.615850e-47
Msa0268830	Msa0269140	0.849689	2.752086e-60	-8.615850e-47
Msa0268840	Msa0269140	0.812010	5.256297e-51	-8.615850e-47
Msa0268940	Msa0269140	0.806281	8.877955e-50	-8.615850e-47
Msa0268950	Msa0269140	0.832699	8.146035e-56	-8.615850e-47
Msa0268960	Msa0269140	0.832113	1.137376e-55	-8.615850e-47
Msa0269040	Msa0269140	0.847586	1.053230e-59	-8.615850e-47
Msa0269050	Msa0269140	0.821563	3.778452e-53	-8.615850e-47
Msa0269130	Msa0269140	0.860137	2.546726e-63	-8.615850e-47
Msa0269140	Msa0269150	0.880272	6.293587e-70	-8.615850e-47
Msa0269140	Msa0344180	0.802821	4.675909e-49	-8.615850e-47
Msa0269140	Msa0344190	0.824722	6.921144e-54	-8.615850e-47
Msa0269140	Msa0344300	0.801790	7.625815e-49	-8.615850e-47
Msa0269140	Msa0344310	0.853300	2.617661e-61	-8.615850e-47
Msa0269140	Msa0370210	0.821874	3.201780e-53	-8.615850e-47
Msa0269140	Msa0398630	0.806018	1.008251e-49	-8.615850e-47
Msa0269140	Msa0405420	0.832234	1.061893e-55	-8.615850e-47
Msa0269140	Msa0405430	0.881293	2.706652e-70	-8.615850e-47
Msa0269140	Msa0405440	0.851371	9.267909e-61	-8.615850e-47
Msa0269140	Msa0405510	0.854820	9.542076e-62	-8.615850e-47
Msa0269140	Msa0405520	0.858891	6.032026e-63	-8.615850e-47
Msa0269140	Msa0405530	0.846294	2.377087e-59	-8.615850e-47
Msa0269140	Msa0582510	0.846464	2.136322e-59	-8.615850e-47
Msa0269140	Msa0582630	0.828409	9.135441e-55	-8.615850e-47
Msa0269140	Msa0582640	0.848997	4.289868e-60	-8.615850e-47
Msa0269140	Msa0582650	0.808229	3.431418e-50	-8.615850e-47
Msa0269140	Msa0582660	0.816099	6.584713e-52	-8.615850e-47
Msa0269140	Msa0582690	0.839100	1.939270e-57	-8.615850e-47
Msa0269140	Msa0582700	0.802687	4.985514e-49	-8.615850e-47
Msa0269140	Msa0582750	0.810510	1.111982e-50	-8.615850e-47
Msa0269140	Msa0582760	0.844210	8.704755e-59	-8.615850e-47
Msa0269140	Msa0582770	0.803650	3.150420e-49	-8.615850e-47
Msa0269140	Msa0582780	0.825729	3.998530e-54	-8.615850e-47
Msa0269140	Msa0582810	0.844666	6.563552e-59	-8.615850e-47
Msa0269140	Msa0582820	0.817358	3.437943e-52	-8.615850e-47
Msa0269140	Msa0582910	0.834905	2.286931e-56	-8.615850e-47
Msa0269140	Msa0582920	0.818087	2.353940e-52	-8.615850e-47
Msa0269140	Msa0582930	0.831526	1.588007e-55	-8.615850e-47
Msa0269140	Msa0591290	0.841800	3.814505e-58	-8.615850e-47
Msa0269140	Msa0591310	0.850437	1.699032e-60	-8.615850e-47
Msa0269140	Msa0591350	0.880815	4.020709e-70	-8.615850e-47
Msa0269140	Msa0591360	0.840528	8.237133e-58	-8.615850e-47
Msa0269140	Msa0591380	0.811994	5.298023e-51	-8.615850e-47
Msa0269140	Msa0867680	0.895124	1.290281e-75	-8.615850e-47
Msa0269140	Msa0867690	0.830762	2.446043e-55	-8.615850e-47
Msa0269140	Msa0876520	0.818050	2.399342e-52	-8.615850e-47
Msa0269140	Msa0908220	0.878383	2.935240e-69	-8.615850e-47
Msa0269140	Msa0908230	0.920683	9.381091e-88	-8.615850e-47
Msa0269140	Msa0908240	0.860212	2.417782e-63	-8.615850e-47
Msa0269140	Msa0908310	0.915725	4.183075e-85	-8.615850e-47
Msa0269140	Msa0908320	0.859800	3.219827e-63	-8.615850e-47
Msa0269140	Msa0908370	0.902349	1.061641e-78	-8.615850e-47
Msa0269140	Msa0908380	0.833266	5.886894e-56	-8.615850e-47
Msa0269140	Msa0908430	0.866393	2.946630e-65	-8.615850e-47
Msa0269140	Msa0908440	0.928496	2.659993e-92	-8.615850e-47
Msa0269140	Msa0908450	0.864681	1.020662e-64	-8.615850e-47
Msa0269140	Msa0908480	0.819100	1.386516e-52	-8.615850e-47
Msa0269140	Msa0908530	0.911055	9.374279e-83	-8.615850e-47
Msa0269140	Msa0908540	0.868159	8.029640e-66	-8.615850e-47
Msa0269140	Msa0908590	0.852297	5.063544e-61	-8.615850e-47
Msa0269140	Msa0908600	0.904021	1.895814e-79	-8.615850e-47
Msa0269140	Msa0908610	0.828367	9.354202e-55	-8.615850e-47
Msa0269140	Msa0908650	0.863062	3.253402e-64	-8.615850e-47
Msa0269140	Msa0908660	0.925298	2.217607e-90	-8.615850e-47
Msa0269140	Msa0908670	0.873725	1.177165e-67	-8.615850e-47
Msa0269140	Msa0908720	0.898492	5.034359e-77	-8.615850e-47
Msa0269140	Msa0908730	0.851254	1.000394e-60	-8.615850e-47
Msa0269140	Msa0911190	0.851429	8.925423e-61	-8.615850e-47
Msa0269140	Msa0911200	0.848291	6.730516e-60	-8.615850e-47
Msa0269140	Msa0911230	0.821468	3.972757e-53	-8.615850e-47
Msa0269140	Msa0924830	0.813617	2.337432e-51	-8.615850e-47
Msa0269140	Msa0924870	0.816163	6.369877e-52	-8.615850e-47
Msa0269140	Msa0924890	0.800831	1.198529e-48	-8.615850e-47
Msa0269140	Msa0924930	0.914319	2.202689e-84	-8.615850e-47
Msa0269140	Msa0924940	0.845890	3.063160e-59	-8.615850e-47
Msa0269140	Msa0925100	0.878864	1.988356e-69	-8.615850e-47
Msa0269140	Msa0925110	0.859477	4.025293e-63	-8.615850e-47
Msa0269140	Msa0931070	0.831031	2.102183e-55	-8.615850e-47
Msa0269140	Msa0931130	0.840221	9.907261e-58	-8.615850e-47
Msa0269140	Msa0931140	0.802810	4.702051e-49	-8.615850e-47
Msa0269140	Msa0931220	0.830002	3.752120e-55	-8.615850e-47
Msa0269140	Msa0931240	0.805445	1.330611e-49	-8.615850e-47
Msa0269140	Msa0931260	0.854345	1.309393e-61	-8.615850e-47
Msa0269140	Msa0931270	0.827090	1.895613e-54	-8.615850e-47
Msa0269140	Msa0983630	0.912938	1.096687e-83	-8.615850e-47
Msa0269140	Msa0983640	0.848673	5.274917e-60	-8.615850e-47
Msa0269140	Msa0983720	0.808656	2.782884e-50	-8.615850e-47
Msa0269140	Msa1022050	0.902110	1.354671e-78	-8.615850e-47
Msa0269140	Msa1022060	0.839001	2.057333e-57	-8.615850e-47
Msa0269140	Msa1064410	0.841189	5.524238e-58	-8.615850e-47
Msa0269140	Msa1086080	0.836850	7.346583e-57	-8.615850e-47
Msa0269140	Msa1086090	0.812204	4.769510e-51	-8.615850e-47
Msa0269140	Msa1086100	0.801253	9.825114e-49	-8.615850e-47
Msa0269140	Msa1086140	0.835936	1.254950e-56	-8.615850e-47
Msa0269140	Msa1086180	0.801905	7.222774e-49	-8.615850e-47
Msa0269140	Msa1086190	0.834629	2.683301e-56	-8.615850e-47
Msa0269140	Msa1086200	0.821048	4.967685e-53	-8.615850e-47
Msa0269140	Msa1086210	0.806681	7.308412e-50	-8.615850e-47
Msa0269140	Msa1086270	0.839642	1.402841e-57	-8.615850e-47
Msa0269140	Msa1086380	0.809161	2.169102e-50	-8.615850e-47
Msa0269140	Msa1086550	0.870584	1.307085e-66	-8.615850e-47
Msa0269140	Msa1086560	0.837679	4.509225e-57	-8.615850e-47
Msa0269140	Msa1086590	0.885249	9.572230e-72	-8.615850e-47
Msa0269140	Msa1086600	0.864925	8.558629e-65	-8.615850e-47
Msa0269140	Msa1086720	0.879243	1.460772e-69	-8.615850e-47
Msa0269140	Msa1086730	0.921127	5.324538e-88	-8.615850e-47
Msa0269140	Msa1086740	0.863526	2.337110e-64	-8.615850e-47
Msa0269140	Msa1086790	0.908210	2.192191e-81	-8.615850e-47
Msa0269140	Msa1086800	0.872538	2.944006e-67	-8.615850e-47
Msa0269140	Msa1086880	0.802652	5.069220e-49	-8.615850e-47
Msa0269140	Msa1086890	0.842337	2.750290e-58	-8.615850e-47
Msa0269140	Msa1086900	0.809250	2.076535e-50	-8.615850e-47
Msa0269140	Msa1086910	0.800527	1.382411e-48	-8.615850e-47
Msa0269140	Msa1086960	0.894231	2.996658e-75	-8.615850e-47
Msa0269140	Msa1086970	0.856159	3.885123e-62	-8.615850e-47
Msa0269140	Msa1087030	0.861506	9.777324e-64	-8.615850e-47
Msa0269140	Msa1087040	0.925539	1.599618e-90	-8.615850e-47
Msa0269140	Msa1087050	0.856864	2.411407e-62	-8.615850e-47
Msa0269140	Msa1087110	0.905128	5.953915e-80	-8.615850e-47
Msa0269140	Msa1087120	0.848552	5.700664e-60	-8.615850e-47
Msa0269140	Msa1143120	0.830700	2.533469e-55	-8.615850e-47
Msa0269140	Msa1143130	0.800632	1.315998e-48	-8.615850e-47
Msa0269140	Msa1143160	0.823678	1.217407e-53	-8.615850e-47
Msa0269140	Msa1143170	0.813366	2.654309e-51	-8.615850e-47
Msa0269140	Msa1143180	0.806136	9.522628e-50	-8.615850e-47
Msa0269140	Msa1305090	0.828757	7.528759e-55	-8.615850e-47
Msa0269140	Msa1354420	0.901238	3.277839e-78	-8.615850e-47
Msa0269140	Msa1354430	0.860431	2.075104e-63	-8.615850e-47
Msa0269140	Msa1354480	0.873658	1.239593e-67	-8.615850e-47
Msa0269140	Msa1354490	0.936257	2.316635e-97	-8.615850e-47
Msa0269140	Msa1354500	0.869985	2.053824e-66	-8.615850e-47
Msa0269140	Msa1354550	0.917468	5.115554e-86	-8.615850e-47
Msa0269140	Msa1354560	0.859911	2.980328e-63	-8.615850e-47
Msa0269140	Msa1354610	0.885717	6.392293e-72	-8.615850e-47
Msa0269140	Msa1354620	0.924390	7.510367e-90	-8.615850e-47
Msa0269140	Msa1354630	0.876109	1.812711e-68	-8.615850e-47
Msa0269140	Msa1354680	0.858491	7.943635e-63	-8.615850e-47
Msa0269140	Msa1354690	0.898691	4.140453e-77	-8.615850e-47
Msa0269140	Msa1354700	0.852187	5.442968e-61	-8.615850e-47
Msa0269140	Msa1354740	0.871664	5.752520e-67	-8.615850e-47
Msa0269140	Msa1354750	0.928652	2.133962e-92	-8.615850e-47
Msa0269140	Msa1354760	0.868579	5.879095e-66	-8.615850e-47
Msa0269140	Msa1354810	0.902664	7.696142e-79	-8.615850e-47
Msa0269140	Msa1354820	0.855486	6.110701e-62	-8.615850e-47
Msa0269140	Msa1354900	0.814672	1.367377e-51	-8.615850e-47
Msa0269140	Msa1354910	0.839498	1.528989e-57	-8.615850e-47
Msa0269140	Msa1354920	0.819793	9.634614e-53	-8.615850e-47
Msa0269140	Msa1354930	0.809744	1.626103e-50	-8.615850e-47
Msa0269140	Msa1354980	0.896840	2.506456e-76	-8.615850e-47
Msa0269140	Msa1354990	0.848794	4.882944e-60	-8.615850e-47
Msa0269140	Msa1355070	0.803411	3.531622e-49	-8.615850e-47
Msa0269140	Msa1355080	0.833532	5.052516e-56	-8.615850e-47
Msa0269140	Msa1355090	0.821242	4.480609e-53	-8.615850e-47
Msa0269140	Msa1355100	0.806595	7.621249e-50	-8.615850e-47
Msa0269140	Msa1365890	0.885730	6.321417e-72	-8.615850e-47
Msa0269140	Msa1365900	0.846910	1.613797e-59	-8.615850e-47
Msa0269140	Msa1365950	0.849063	4.111877e-60	-8.615850e-47
Msa0269140	Msa1365960	0.901674	2.110656e-78	-8.615850e-47
Msa0269140	Msa1365970	0.846363	2.277098e-59	-8.615850e-47
Msa0269140	Msa1366080	0.910346	2.075290e-82	-8.615850e-47
Msa0269140	Msa1366090	0.846784	1.747248e-59	-8.615850e-47
Msa0269140	Msa1368230	0.916664	1.357283e-85	-8.615850e-47
Msa0269140	Msa1368240	0.845740	3.364352e-59	-8.615850e-47
Msa0269140	Msa1380600	0.826108	3.250142e-54	-8.615850e-47
Msa0269140	Msa1380620	0.809600	1.746662e-50	-8.615850e-47
Msa0269140	Msa1385410	0.903801	2.381133e-79	-8.615850e-47
Msa0269140	Msa1385420	0.826527	2.583575e-54	-8.615850e-47
Msa0269140	Msa1391090	0.854875	9.198046e-62	-8.615850e-47
Msa0269140	Msa1391100	0.925785	1.144551e-90	-8.615850e-47
Msa0269140	Msa1391110	0.858059	1.067839e-62	-8.615850e-47
Msa0269140	Msa1391160	0.879580	1.109376e-69	-8.615850e-47
Msa0269140	Msa1391170	0.839102	1.936889e-57	-8.615850e-47
Msa0269140	Msa1391220	0.865733	4.768009e-65	-8.615850e-47
Msa0269140	Msa1391230	0.907739	3.657934e-81	-8.615850e-47
Msa0269140	Msa1391240	0.869392	3.205773e-66	-8.615850e-47
Msa0269140	Msa1394030	0.823750	1.170779e-53	-8.615850e-47
Msa0269140	Msa1394040	0.843931	1.034156e-58	-8.615850e-47
Msa0269140	Msa1394150	0.845199	4.712920e-59	-8.615850e-47
Msa0269140	Msa1394160	0.815344	9.698805e-52	-8.615850e-47
Msa0269140	Msa1394210	0.837278	5.712772e-57	-8.615850e-47
Msa0269140	Msa1394230	0.803807	2.922740e-49	-8.615850e-47
Msa0269140	Msa1460120	0.852033	6.020692e-61	-8.615850e-47
Msa0269140	Msa1460130	0.838276	3.166809e-57	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0269140	MtrunA17_CPg0492421	91.729	133	9	1	1	131	25	157	1.30e-85	246
Msa0269140	MtrunA17_Chr4g0016101	91.729	133	9	1	1	131	25	157	1.30e-85	246
Msa0269140	MtrunA17_Chr3g0090841	91.729	133	9	1	1	131	25	157	1.30e-85	246
Msa0269140	MtrunA17_Chr4g0002541	83.333	60	10	0	1	60	1	60	3.60e-30	103
Msa0269140	MtrunA17_Chr4g0057401	87.500	40	5	0	92	131	1	40	1.06e-17	71.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0269140	ATCG00900.1	95.420	131	6	0	1	131	25	155	7.02e-91	260
Msa0269140	ATCG01240.1	95.420	131	6	0	1	131	25	155	7.02e-91	260
Msa0269140	ATMG01270.1	33.824	136	80	3	2	131	15	146	3.86e-18	75.5
Msa0269140	AT2G07696.1	33.824	136	80	3	2	131	15	146	3.86e-18	75.5

Find 25 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGCCATTCGTTGGTTATT+AGG	0.268444	2_2:-70536026	Msa0269140:CDS
CATCAAGTTCCCGTTGAAAT+AGG	0.307921	2_2:-70536068	Msa0269140:CDS
AAAACGTCCAGGTCGAAATA+TGG	0.317789	2_2:-70535994	Msa0269140:CDS
CAAATTAAGTTCCGAATTAG+TGG	0.342047	2_2:-70535967	Msa0269140:CDS
TGGCGATGCCATACGCAAAA+AGG	0.366109	2_2:-70535928	Msa0269140:CDS
TTTGGCAGCATCCACTAATT+CGG	0.404543	2_2:+70535956	None:intergenic
ACGTATTGCTTGACGTAAAA+CGG	0.405511	2_2:+70536142	None:intergenic
GCTTGACGTAAAACGGATAG+TGG	0.418362	2_2:+70536149	None:intergenic
GTAAAAGCAAGACGCGTAAA+CGG	0.427761	2_2:-70536098	Msa0269140:CDS
TATGGCATCGCCATTCCCTT+TGG	0.436234	2_2:+70535938	None:intergenic
TGTGTGGATCCTATTTCAAC+GGG	0.470768	2_2:+70536059	None:intergenic
TTATCTATCGAGCTATGAAA+AGG	0.512086	2_2:-70536196	Msa0269140:CDS
GAAAAGCACTTGCCATTCGT+TGG	0.526859	2_2:-70536034	Msa0269140:CDS
GTGGATGCTGCCAAAGGGAA+TGG	0.532446	2_2:-70535948	Msa0269140:CDS
GGCGCATCCCGAAAACGTCC+AGG	0.540732	2_2:-70536005	Msa0269140:CDS
AAAGGAAGAGACTCATAGAA+TGG	0.548096	2_2:-70535910	Msa0269140:CDS
TTGTGTGGATCCTATTTCAA+CGG	0.548545	2_2:+70536058	None:intergenic
AATTAGTGGATGCTGCCAAA+GGG	0.575951	2_2:-70535953	Msa0269140:CDS
GAATTAGTGGATGCTGCCAA+AGG	0.584526	2_2:-70535954	Msa0269140:CDS
AGAGACTCATAGAATGGCAG+AGG	0.593635	2_2:-70535904	Msa0269140:CDS
TTGAAAGCCATATTTCGACC+TGG	0.605724	2_2:+70535987	None:intergenic
TGCGCCTAATAACCAACGAA+TGG	0.620213	2_2:+70536022	None:intergenic
GTTAACCGTATTATGAAACA+CGG	0.650772	2_2:-70536242	Msa0269140:CDS
TTTACGTCAAGCAATACGTG+GGG	0.715577	2_2:-70536138	Msa0269140:CDS
GTTGAAATAGGATCCACACA+AGG	0.731975	2_2:-70536056	Msa0269140:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTTTCCGTGTTTCATAATA+CGG	+	chr2_2:70535889-70535908	None:intergenic	25.0%
	GTTAACCGTATTATGAAACA+CGG	-	chr2_2:70535881-70535900	Msa0269140:CDS	30.0%
	GAAACACGGAAAAAAATCAT+TGG	-	chr2_2:70535895-70535914	Msa0269140:CDS	30.0%
	TTATCTATCGAGCTATGAAA+AGG	-	chr2_2:70535927-70535946	Msa0269140:CDS	30.0%
!!	TCTTGCTTTTACTGCTATAT+CGG	+	chr2_2:70536017-70536036	None:intergenic	30.0%
	CAAATTAAGTTCCGAATTAG+TGG	-	chr2_2:70536156-70536175	Msa0269140:CDS	30.0%
	ACGTATTGCTTGACGTAAAA+CGG	+	chr2_2:70535984-70536003	None:intergenic	35.0%
!	TTTTACGTCAAGCAATACGT+GGG	-	chr2_2:70535984-70536003	Msa0269140:CDS	35.0%
!!	CTTGCTTTTACTGCTATATC+GGG	+	chr2_2:70536016-70536035	None:intergenic	35.0%
	TTGTGTGGATCCTATTTCAA+CGG	+	chr2_2:70536068-70536087	None:intergenic	35.0%
	AAAGGAAGAGACTCATAGAA+TGG	-	chr2_2:70536213-70536232	Msa0269140:CDS	35.0%
!	GTTTTACGTCAAGCAATACG+TGG	-	chr2_2:70535983-70536002	Msa0269140:CDS	40.0%
	TTTACGTCAAGCAATACGTG+GGG	-	chr2_2:70535985-70536004	Msa0269140:CDS	40.0%
	GTAAAAGCAAGACGCGTAAA+CGG	-	chr2_2:70536025-70536044	Msa0269140:CDS	40.0%
	CATCAAGTTCCCGTTGAAAT+AGG	-	chr2_2:70536055-70536074	Msa0269140:CDS	40.0%
	TGTGTGGATCCTATTTCAAC+GGG	+	chr2_2:70536067-70536086	None:intergenic	40.0%
	GTTGAAATAGGATCCACACA+AGG	-	chr2_2:70536067-70536086	Msa0269140:CDS	40.0%
!	CTTGCCATTCGTTGGTTATT+AGG	-	chr2_2:70536097-70536116	Msa0269140:CDS	40.0%
!	TATTTCGACCTGGACGTTTT+CGG	+	chr2_2:70536129-70536148	None:intergenic	40.0%
	AAAACGTCCAGGTCGAAATA+TGG	-	chr2_2:70536129-70536148	Msa0269140:CDS	40.0%
	TTGAAAGCCATATTTCGACC+TGG	+	chr2_2:70536139-70536158	None:intergenic	40.0%
	TTTGGCAGCATCCACTAATT+CGG	+	chr2_2:70536170-70536189	None:intergenic	40.0%
!	AATTAGTGGATGCTGCCAAA+GGG	-	chr2_2:70536170-70536189	Msa0269140:CDS	40.0%
!	AGTCTCTTCCTTTTTGCGTA+TGG	+	chr2_2:70536206-70536225	None:intergenic	40.0%
	GCTTGACGTAAAACGGATAG+TGG	+	chr2_2:70535977-70535996	None:intergenic	45.0%
!!	GAAAAGCACTTGCCATTCGT+TGG	-	chr2_2:70536089-70536108	Msa0269140:CDS	45.0%
	TGCGCCTAATAACCAACGAA+TGG	+	chr2_2:70536104-70536123	None:intergenic	45.0%
!	ATTTCGACCTGGACGTTTTC+GGG	+	chr2_2:70536128-70536147	None:intergenic	45.0%
!	GAATTAGTGGATGCTGCCAA+AGG	-	chr2_2:70536169-70536188	Msa0269140:CDS	45.0%
	AGAGACTCATAGAATGGCAG+AGG	-	chr2_2:70536219-70536238	Msa0269140:CDS	45.0%
!	GGCAAGTGCTTTTCCTTGTG+TGG	+	chr2_2:70536083-70536102	None:intergenic	50.0%
	TATGGCATCGCCATTCCCTT+TGG	+	chr2_2:70536188-70536207	None:intergenic	50.0%
	TGGCGATGCCATACGCAAAA+AGG	-	chr2_2:70536195-70536214	Msa0269140:CDS	50.0%
	GTGGATGCTGCCAAAGGGAA+TGG	-	chr2_2:70536175-70536194	Msa0269140:CDS	55.0%
	GGCGCATCCCGAAAACGTCC+AGG	-	chr2_2:70536118-70536137	Msa0269140:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_2	gene	70535875	70536270	70535875	ID=Msa0269140;Name=Msa0269140
chr2_2	mRNA	70535875	70536270	70535875	ID=Msa0269140-mRNA-1;Parent=Msa0269140;Name=Msa0269140-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|131
chr2_2	exon	70535875	70536270	70535875	ID=Msa0269140-mRNA-1:exon:22739;Parent=Msa0269140-mRNA-1
chr2_2	CDS	70535875	70536270	70535875	ID=Msa0269140-mRNA-1:cds;Parent=Msa0269140-mRNA-1

Gene Sequence

>Msa0269140

ATGTTGGTTAACCGTATTATGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCTATGAAAAGGATTCAACAAAAGACAGAAACAAATCCACTATCCGTTTTACGTCAAGCAATACGTGGGGTAACTCCCGATATAGCAGTAAAAGCAAGACGCGTAAACGGATCGACTCATCAAGTTCCCGTTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGCGCATCCCGAAAACGTCCAGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAATGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Protein sequence

>Msa0269140

MLVNRIMKHGKKSLAYQIIYRAMKRIQQKTETNPLSVLRQAIRGVTPDIAVKARRVNGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGNGDAIRKKEETHRMAEANRAFAHFR*