Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354480 | BBN70062.1 | 96.717 | 396 | 11 | 1 | 1 | 394 | 86 | 481 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354480 | sp|P0CC61|NU2C2_EUCGG | 94.416 | 394 | 15 | 1 | 1 | 394 | 124 | 510 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354480 | A0A5H2XTJ1 | 96.717 | 396 | 11 | 1 | 1 | 394 | 86 | 481 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095150 | Msa1354480 | 0.834290 | 3.264980e-56 | -8.615850e-47 |
| Msa0095170 | Msa1354480 | 0.814509 | 1.486073e-51 | -8.615850e-47 |
| Msa0095190 | Msa1354480 | 0.831073 | 2.052305e-55 | -8.615850e-47 |
| Msa0095280 | Msa1354480 | 0.800208 | 1.605538e-48 | -8.615850e-47 |
| Msa0095290 | Msa1354480 | 0.811985 | 5.322551e-51 | -8.615850e-47 |
| Msa1354380 | Msa1354480 | 0.805991 | 1.021577e-49 | -8.615850e-47 |
| Msa1354420 | Msa1354480 | 0.866969 | 1.932223e-65 | -8.615850e-47 |
| Msa1354430 | Msa1354480 | 0.899440 | 1.978004e-77 | -8.615850e-47 |
| Msa1354480 | Msa1354490 | 0.874294 | 7.556125e-68 | -8.615850e-47 |
| Msa1354480 | Msa1354500 | 0.844651 | 6.625067e-59 | -8.615850e-47 |
| Msa1354480 | Msa1354550 | 0.876054 | 1.894448e-68 | -8.615850e-47 |
| Msa1354480 | Msa1354560 | 0.864565 | 1.110110e-64 | -8.615850e-47 |
| Msa1354480 | Msa1354610 | 0.938351 | 7.769488e-99 | -8.615850e-47 |
| Msa1354480 | Msa1354620 | 0.871190 | 8.252772e-67 | -8.615850e-47 |
| Msa1354480 | Msa1354630 | 0.854687 | 1.042763e-61 | -8.615850e-47 |
| Msa1354480 | Msa1354680 | 0.835361 | 1.755225e-56 | -8.615850e-47 |
| Msa1354480 | Msa1354690 | 0.848065 | 7.771173e-60 | -8.615850e-47 |
| Msa1354480 | Msa1354700 | 0.891650 | 3.273794e-74 | -8.615850e-47 |
| Msa1354480 | Msa1354740 | 0.940315 | 2.880746e-100 | -8.615850e-47 |
| Msa1354480 | Msa1354750 | 0.864265 | 1.376485e-64 | -8.615850e-47 |
| Msa1354480 | Msa1354760 | 0.842057 | 3.261212e-58 | -8.615850e-47 |
| Msa1354480 | Msa1354810 | 0.872173 | 3.896732e-67 | -8.615850e-47 |
| Msa1354480 | Msa1354820 | 0.907752 | 3.607514e-81 | -8.615850e-47 |
| Msa1354480 | Msa1354860 | 0.801752 | 7.762144e-49 | -8.615850e-47 |
| Msa1354480 | Msa1354900 | 0.824309 | 8.656973e-54 | -8.615850e-47 |
| Msa1354480 | Msa1354910 | 0.827864 | 1.235801e-54 | -8.615850e-47 |
| Msa1354480 | Msa1354920 | 0.831703 | 1.436676e-55 | -8.615850e-47 |
| Msa1354480 | Msa1354930 | 0.808115 | 3.628984e-50 | -8.615850e-47 |
| Msa1354480 | Msa1354980 | 0.868120 | 8.264273e-66 | -8.615850e-47 |
| Msa1354480 | Msa1354990 | 0.912347 | 2.161060e-83 | -8.615850e-47 |
| Msa1354480 | Msa1355070 | 0.816894 | 4.370462e-52 | -8.615850e-47 |
| Msa1354480 | Msa1355080 | 0.829258 | 5.692406e-55 | -8.615850e-47 |
| Msa1354480 | Msa1355090 | 0.828943 | 6.787366e-55 | -8.615850e-47 |
| Msa1354480 | Msa1355100 | 0.819976 | 8.750735e-53 | -8.615850e-47 |
| Msa1354480 | Msa1365890 | 0.861036 | 1.360400e-63 | -8.615850e-47 |
| Msa1354480 | Msa1365900 | 0.842680 | 2.230689e-58 | -8.615850e-47 |
| Msa1354480 | Msa1365950 | 0.885771 | 6.101428e-72 | -8.615850e-47 |
| Msa1354480 | Msa1365960 | 0.856952 | 2.272065e-62 | -8.615850e-47 |
| Msa1354480 | Msa1365970 | 0.846665 | 1.882778e-59 | -8.615850e-47 |
| Msa1354480 | Msa1366080 | 0.869373 | 3.250184e-66 | -8.615850e-47 |
| Msa1354480 | Msa1366090 | 0.881936 | 1.585043e-70 | -8.615850e-47 |
| Msa1354480 | Msa1368230 | 0.867048 | 1.823969e-65 | -8.615850e-47 |
| Msa1354480 | Msa1368240 | 0.851426 | 8.943338e-61 | -8.615850e-47 |
| Msa1354480 | Msa1368290 | 0.826221 | 3.055425e-54 | -8.615850e-47 |
| Msa1354480 | Msa1380590 | 0.828478 | 8.794694e-55 | -8.615850e-47 |
| Msa1354480 | Msa1380600 | 0.829351 | 5.404672e-55 | -8.615850e-47 |
| Msa1354480 | Msa1380610 | 0.828115 | 1.075607e-54 | -8.615850e-47 |
| Msa1354480 | Msa1380620 | 0.828079 | 1.097575e-54 | -8.615850e-47 |
| Msa1354480 | Msa1380690 | 0.803304 | 3.716822e-49 | -8.615850e-47 |
| Msa1354480 | Msa1385410 | 0.852677 | 3.946801e-61 | -8.615850e-47 |
| Msa1354480 | Msa1385420 | 0.859303 | 4.540870e-63 | -8.615850e-47 |
| Msa1354480 | Msa1391090 | 0.900472 | 7.080392e-78 | -8.615850e-47 |
| Msa1354480 | Msa1391100 | 0.870738 | 1.162837e-66 | -8.615850e-47 |
| Msa1354480 | Msa1391110 | 0.837094 | 6.366555e-57 | -8.615850e-47 |
| Msa1354480 | Msa1391160 | 0.856038 | 4.214249e-62 | -8.615850e-47 |
| Msa1354480 | Msa1391170 | 0.889032 | 3.482732e-73 | -8.615850e-47 |
| Msa1354480 | Msa1391220 | 0.895008 | 1.441019e-75 | -8.615850e-47 |
| Msa1354480 | Msa1391230 | 0.847977 | 8.217621e-60 | -8.615850e-47 |
| Msa1354480 | Msa1391240 | 0.854127 | 1.513379e-61 | -8.615850e-47 |
| Msa1354480 | Msa1394030 | 0.823080 | 1.679281e-53 | -8.615850e-47 |
| Msa1354480 | Msa1394040 | 0.845283 | 4.473836e-59 | -8.615850e-47 |
| Msa1354480 | Msa1394060 | 0.807714 | 4.416925e-50 | -8.615850e-47 |
| Msa1354480 | Msa1394130 | 0.817418 | 3.332560e-52 | -8.615850e-47 |
| Msa1354480 | Msa1394150 | 0.834812 | 2.413354e-56 | -8.615850e-47 |
| Msa1354480 | Msa1394160 | 0.848115 | 7.529130e-60 | -8.615850e-47 |
| Msa1354480 | Msa1394210 | 0.826914 | 2.088933e-54 | -8.615850e-47 |
| Msa1354480 | Msa1394220 | 0.829573 | 4.773481e-55 | -8.615850e-47 |
| Msa1354480 | Msa1394230 | 0.827931 | 1.191330e-54 | -8.615850e-47 |
| Msa1354480 | Msa1394250 | 0.818214 | 2.203228e-52 | -8.615850e-47 |
| Msa1354480 | Msa1460120 | 0.829730 | 4.370537e-55 | -8.615850e-47 |
| Msa1354480 | Msa1460130 | 0.844378 | 7.845074e-59 | -8.615850e-47 |
| Msa0611450 | Msa1354480 | 0.826375 | 2.807637e-54 | -8.615850e-47 |
| Msa0694170 | Msa1354480 | 0.825176 | 5.405156e-54 | -8.615850e-47 |
| Msa0139800 | Msa1354480 | 0.809369 | 1.958107e-50 | -8.615850e-47 |
| Msa0139810 | Msa1354480 | 0.805291 | 1.433173e-49 | -8.615850e-47 |
| Msa0202640 | Msa1354480 | 0.832383 | 9.755232e-56 | -8.615850e-47 |
| Msa1305090 | Msa1354480 | 0.823348 | 1.454180e-53 | -8.615850e-47 |
| Msa1342040 | Msa1354480 | 0.808661 | 2.775183e-50 | -8.615850e-47 |
| Msa0370210 | Msa1354480 | 0.822117 | 2.812034e-53 | -8.615850e-47 |
| Msa0398630 | Msa1354480 | 0.812227 | 4.713751e-51 | -8.615850e-47 |
| Msa0405420 | Msa1354480 | 0.853100 | 2.986885e-61 | -8.615850e-47 |
| Msa0405430 | Msa1354480 | 0.836542 | 8.801893e-57 | -8.615850e-47 |
| Msa0405440 | Msa1354480 | 0.840191 | 1.008942e-57 | -8.615850e-47 |
| Msa0405510 | Msa1354480 | 0.882010 | 1.490697e-70 | -8.615850e-47 |
| Msa0405520 | Msa1354480 | 0.827780 | 1.294718e-54 | -8.615850e-47 |
| Msa0405530 | Msa1354480 | 0.828642 | 8.026647e-55 | -8.615850e-47 |
| Msa0983630 | Msa1354480 | 0.882518 | 9.738217e-71 | -8.615850e-47 |
| Msa0983640 | Msa1354480 | 0.872048 | 4.290053e-67 | -8.615850e-47 |
| Msa0983680 | Msa1354480 | 0.802595 | 5.206978e-49 | -8.615850e-47 |
| Msa0983720 | Msa1354480 | 0.832946 | 7.072788e-56 | -8.615850e-47 |
| Msa1022050 | Msa1354480 | 0.864190 | 1.453523e-64 | -8.615850e-47 |
| Msa1022060 | Msa1354480 | 0.856963 | 2.254380e-62 | -8.615850e-47 |
| Msa1064410 | Msa1354480 | 0.835337 | 1.779662e-56 | -8.615850e-47 |
| Msa1086070 | Msa1354480 | 0.830152 | 3.449633e-55 | -8.615850e-47 |
| Msa1086080 | Msa1354480 | 0.832475 | 9.254343e-56 | -8.615850e-47 |
| Msa1086090 | Msa1354480 | 0.824318 | 8.615139e-54 | -8.615850e-47 |
| Msa1086100 | Msa1354480 | 0.803334 | 3.663702e-49 | -8.615850e-47 |
| Msa1086140 | Msa1354480 | 0.838687 | 2.479965e-57 | -8.615850e-47 |
| Msa1086150 | Msa1354480 | 0.831425 | 1.681784e-55 | -8.615850e-47 |
| Msa1086180 | Msa1354480 | 0.824238 | 8.993386e-54 | -8.615850e-47 |
| Msa1086190 | Msa1354480 | 0.822014 | 2.970932e-53 | -8.615850e-47 |
| Msa1086200 | Msa1354480 | 0.833119 | 6.403724e-56 | -8.615850e-47 |
| Msa1086210 | Msa1354480 | 0.804935 | 1.700756e-49 | -8.615850e-47 |
| Msa1086250 | Msa1354480 | 0.816726 | 4.766488e-52 | -8.615850e-47 |
| Msa1086270 | Msa1354480 | 0.830210 | 3.337762e-55 | -8.615850e-47 |
| Msa1086280 | Msa1354480 | 0.832820 | 7.598081e-56 | -8.615850e-47 |
| Msa1086380 | Msa1354480 | 0.832892 | 7.291921e-56 | -8.615850e-47 |
| Msa1086450 | Msa1354480 | 0.842289 | 2.832060e-58 | -8.615850e-47 |
| Msa1086470 | Msa1354480 | 0.830590 | 2.696251e-55 | -8.615850e-47 |
| Msa1086550 | Msa1354480 | 0.890294 | 1.122202e-73 | -8.615850e-47 |
| Msa1086590 | Msa1354480 | 0.839612 | 1.427642e-57 | -8.615850e-47 |
| Msa1086600 | Msa1354480 | 0.890918 | 6.376439e-74 | -8.615850e-47 |
| Msa1086660 | Msa1354480 | 0.804349 | 2.254004e-49 | -8.615850e-47 |
| Msa1086720 | Msa1354480 | 0.918756 | 1.051981e-86 | -8.615850e-47 |
| Msa1086730 | Msa1354480 | 0.856513 | 3.057328e-62 | -8.615850e-47 |
| Msa1086740 | Msa1354480 | 0.844911 | 5.636563e-59 | -8.615850e-47 |
| Msa1086790 | Msa1354480 | 0.870010 | 2.014918e-66 | -8.615850e-47 |
| Msa1086800 | Msa1354480 | 0.907350 | 5.575092e-81 | -8.615850e-47 |
| Msa1086880 | Msa1354480 | 0.823241 | 1.539762e-53 | -8.615850e-47 |
| Msa1086890 | Msa1354480 | 0.828594 | 8.241146e-55 | -8.615850e-47 |
| Msa1086900 | Msa1354480 | 0.828647 | 8.003132e-55 | -8.615850e-47 |
| Msa1086910 | Msa1354480 | 0.825822 | 3.800343e-54 | -8.615850e-47 |
| Msa1086960 | Msa1354480 | 0.883209 | 5.447024e-71 | -8.615850e-47 |
| Msa1086970 | Msa1354480 | 0.899957 | 1.183794e-77 | -8.615850e-47 |
| Msa1087030 | Msa1354480 | 0.901334 | 2.976599e-78 | -8.615850e-47 |
| Msa1087040 | Msa1354480 | 0.862070 | 6.575639e-64 | -8.615850e-47 |
| Msa1087050 | Msa1354480 | 0.851709 | 7.437034e-61 | -8.615850e-47 |
| Msa1087110 | Msa1354480 | 0.871588 | 6.094294e-67 | -8.615850e-47 |
| Msa1087120 | Msa1354480 | 0.898615 | 4.460390e-77 | -8.615850e-47 |
| Msa0263770 | Msa1354480 | 0.842863 | 1.994597e-58 | -8.615850e-47 |
| Msa0268170 | Msa1354480 | 0.817846 | 2.668555e-52 | -8.615850e-47 |
| Msa0268190 | Msa1354480 | 0.802053 | 6.734143e-49 | -8.615850e-47 |
| Msa0268250 | Msa1354480 | 0.903121 | 4.811092e-79 | -8.615850e-47 |
| Msa0268260 | Msa1354480 | 0.856066 | 4.134290e-62 | -8.615850e-47 |
| Msa0268270 | Msa1354480 | 0.848601 | 5.524246e-60 | -8.615850e-47 |
| Msa0268300 | Msa1354480 | 0.846799 | 1.731005e-59 | -8.615850e-47 |
| Msa0268310 | Msa1354480 | 0.897188 | 1.791241e-76 | -8.615850e-47 |
| Msa0268390 | Msa1354480 | 0.831905 | 1.280799e-55 | -8.615850e-47 |
| Msa0268400 | Msa1354480 | 0.816892 | 4.375329e-52 | -8.615850e-47 |
| Msa0268410 | Msa1354480 | 0.822608 | 2.162689e-53 | -8.615850e-47 |
| Msa0268430 | Msa1354480 | 0.804517 | 2.079636e-49 | -8.615850e-47 |
| Msa0268550 | Msa1354480 | 0.823783 | 1.150146e-53 | -8.615850e-47 |
| Msa0268560 | Msa1354480 | 0.828115 | 1.075695e-54 | -8.615850e-47 |
| Msa0268570 | Msa1354480 | 0.818825 | 1.601461e-52 | -8.615850e-47 |
| Msa0268580 | Msa1354480 | 0.826085 | 3.291302e-54 | -8.615850e-47 |
| Msa0268630 | Msa1354480 | 0.825564 | 4.375128e-54 | -8.615850e-47 |
| Msa0268640 | Msa1354480 | 0.813833 | 2.095285e-51 | -8.615850e-47 |
| Msa0268720 | Msa1354480 | 0.814125 | 1.806727e-51 | -8.615850e-47 |
| Msa0268740 | Msa1354480 | 0.833260 | 5.906934e-56 | -8.615850e-47 |
| Msa0268750 | Msa1354480 | 0.842033 | 3.310109e-58 | -8.615850e-47 |
| Msa0268760 | Msa1354480 | 0.801114 | 1.048795e-48 | -8.615850e-47 |
| Msa0268830 | Msa1354480 | 0.834682 | 2.602630e-56 | -8.615850e-47 |
| Msa0268840 | Msa1354480 | 0.816276 | 6.011986e-52 | -8.615850e-47 |
| Msa0268860 | Msa1354480 | 0.811357 | 7.290534e-51 | -8.615850e-47 |
| Msa0268940 | Msa1354480 | 0.822567 | 2.210373e-53 | -8.615850e-47 |
| Msa0268950 | Msa1354480 | 0.841028 | 6.089834e-58 | -8.615850e-47 |
| Msa0268960 | Msa1354480 | 0.838102 | 3.509893e-57 | -8.615850e-47 |
| Msa0269040 | Msa1354480 | 0.827103 | 1.881815e-54 | -8.615850e-47 |
| Msa0269050 | Msa1354480 | 0.828375 | 9.309735e-55 | -8.615850e-47 |
| Msa0269070 | Msa1354480 | 0.809117 | 2.217590e-50 | -8.615850e-47 |
| Msa0269090 | Msa1354480 | 0.800753 | 1.242807e-48 | -8.615850e-47 |
| Msa0269130 | Msa1354480 | 0.879217 | 1.491881e-69 | -8.615850e-47 |
| Msa0269140 | Msa1354480 | 0.873658 | 1.239593e-67 | -8.615850e-47 |
| Msa0269150 | Msa1354480 | 0.857537 | 1.525535e-62 | -8.615850e-47 |
| Msa0344180 | Msa1354480 | 0.831451 | 1.657024e-55 | -8.615850e-47 |
| Msa0344190 | Msa1354480 | 0.846183 | 2.548737e-59 | -8.615850e-47 |
| Msa0344300 | Msa1354480 | 0.819076 | 1.404434e-52 | -8.615850e-47 |
| Msa0344310 | Msa1354480 | 0.819686 | 1.019317e-52 | -8.615850e-47 |
| Msa1143120 | Msa1354480 | 0.819170 | 1.336472e-52 | -8.615850e-47 |
| Msa1143130 | Msa1354480 | 0.808337 | 3.253950e-50 | -8.615850e-47 |
| Msa1143160 | Msa1354480 | 0.831111 | 2.008812e-55 | -8.615850e-47 |
| Msa1143170 | Msa1354480 | 0.823133 | 1.632069e-53 | -8.615850e-47 |
| Msa1143180 | Msa1354480 | 0.802209 | 6.253503e-49 | -8.615850e-47 |
| Msa0582510 | Msa1354480 | 0.832153 | 1.112313e-55 | -8.615850e-47 |
| Msa0582520 | Msa1354480 | 0.825689 | 4.088284e-54 | -8.615850e-47 |
| Msa0582540 | Msa1354480 | 0.800319 | 1.524262e-48 | -8.615850e-47 |
| Msa0582610 | Msa1354480 | 0.802474 | 5.514721e-49 | -8.615850e-47 |
| Msa0582630 | Msa1354480 | 0.831538 | 1.576964e-55 | -8.615850e-47 |
| Msa0582640 | Msa1354480 | 0.829410 | 5.229482e-55 | -8.615850e-47 |
| Msa0582650 | Msa1354480 | 0.833574 | 4.933434e-56 | -8.615850e-47 |
| Msa0582660 | Msa1354480 | 0.819443 | 1.158111e-52 | -8.615850e-47 |
| Msa0582690 | Msa1354480 | 0.830511 | 2.818371e-55 | -8.615850e-47 |
| Msa0582700 | Msa1354480 | 0.835746 | 1.402664e-56 | -8.615850e-47 |
| Msa0582730 | Msa1354480 | 0.824713 | 6.953398e-54 | -8.615850e-47 |
| Msa0582750 | Msa1354480 | 0.830902 | 2.260578e-55 | -8.615850e-47 |
| Msa0582760 | Msa1354480 | 0.838933 | 2.142700e-57 | -8.615850e-47 |
| Msa0582770 | Msa1354480 | 0.826810 | 2.211292e-54 | -8.615850e-47 |
| Msa0582780 | Msa1354480 | 0.836480 | 9.131102e-57 | -8.615850e-47 |
| Msa0582810 | Msa1354480 | 0.833208 | 6.086946e-56 | -8.615850e-47 |
| Msa0582820 | Msa1354480 | 0.831252 | 1.854657e-55 | -8.615850e-47 |
| Msa0582910 | Msa1354480 | 0.820666 | 6.078881e-53 | -8.615850e-47 |
| Msa0582920 | Msa1354480 | 0.843894 | 1.058164e-58 | -8.615850e-47 |
| Msa0582930 | Msa1354480 | 0.818143 | 2.285653e-52 | -8.615850e-47 |
| Msa0591290 | Msa1354480 | 0.813491 | 2.491727e-51 | -8.615850e-47 |
| Msa0591310 | Msa1354480 | 0.892524 | 1.466600e-74 | -8.615850e-47 |
| Msa0591350 | Msa1354480 | 0.840752 | 7.195687e-58 | -8.615850e-47 |
| Msa0591360 | Msa1354480 | 0.867232 | 1.593002e-65 | -8.615850e-47 |
| Msa0591370 | Msa1354480 | 0.806937 | 6.452403e-50 | -8.615850e-47 |
| Msa0591380 | Msa1354480 | 0.830371 | 3.049904e-55 | -8.615850e-47 |
| Msa0867680 | Msa1354480 | 0.859303 | 4.539813e-63 | -8.615850e-47 |
| Msa0867690 | Msa1354480 | 0.874867 | 4.828363e-68 | -8.615850e-47 |
| Msa0876520 | Msa1354480 | 0.838764 | 2.369553e-57 | -8.615850e-47 |
| Msa0908220 | Msa1354480 | 0.908399 | 1.784232e-81 | -8.615850e-47 |
| Msa0908230 | Msa1354480 | 0.848186 | 7.194522e-60 | -8.615850e-47 |
| Msa0908240 | Msa1354480 | 0.830211 | 3.336105e-55 | -8.615850e-47 |
| Msa0908310 | Msa1354480 | 0.872081 | 4.182776e-67 | -8.615850e-47 |
| Msa0908320 | Msa1354480 | 0.918862 | 9.225858e-87 | -8.615850e-47 |
| Msa0908370 | Msa1354480 | 0.870895 | 1.032260e-66 | -8.615850e-47 |
| Msa0908380 | Msa1354480 | 0.852683 | 3.930585e-61 | -8.615850e-47 |
| Msa0908430 | Msa1354480 | 0.902054 | 1.434916e-78 | -8.615850e-47 |
| Msa0908440 | Msa1354480 | 0.865096 | 7.566917e-65 | -8.615850e-47 |
| Msa0908450 | Msa1354480 | 0.859248 | 4.717896e-63 | -8.615850e-47 |
| Msa0908480 | Msa1354480 | 0.814989 | 1.163319e-51 | -8.615850e-47 |
| Msa0908530 | Msa1354480 | 0.880907 | 3.726854e-70 | -8.615850e-47 |
| Msa0908540 | Msa1354480 | 0.905351 | 4.705382e-80 | -8.615850e-47 |
| Msa0908590 | Msa1354480 | 0.899478 | 1.905425e-77 | -8.615850e-47 |
| Msa0908600 | Msa1354480 | 0.853899 | 1.760474e-61 | -8.615850e-47 |
| Msa0908610 | Msa1354480 | 0.823918 | 1.069233e-53 | -8.615850e-47 |
| Msa0908650 | Msa1354480 | 0.895603 | 8.193664e-76 | -8.615850e-47 |
| Msa0908660 | Msa1354480 | 0.863346 | 2.657617e-64 | -8.615850e-47 |
| Msa0908670 | Msa1354480 | 0.866302 | 3.148142e-65 | -8.615850e-47 |
| Msa0908720 | Msa1354480 | 0.873510 | 1.390084e-67 | -8.615850e-47 |
| Msa0908730 | Msa1354480 | 0.902223 | 1.207124e-78 | -8.615850e-47 |
| Msa0911190 | Msa1354480 | 0.809785 | 1.593982e-50 | -8.615850e-47 |
| Msa0911200 | Msa1354480 | 0.846557 | 2.015632e-59 | -8.615850e-47 |
| Msa0911230 | Msa1354480 | 0.810808 | 9.586091e-51 | -8.615850e-47 |
| Msa0924830 | Msa1354480 | 0.829883 | 4.011098e-55 | -8.615850e-47 |
| Msa0924850 | Msa1354480 | 0.812840 | 3.461618e-51 | -8.615850e-47 |
| Msa0924870 | Msa1354480 | 0.824688 | 7.047921e-54 | -8.615850e-47 |
| Msa0924880 | Msa1354480 | 0.823949 | 1.051509e-53 | -8.615850e-47 |
| Msa0924890 | Msa1354480 | 0.801289 | 9.660234e-49 | -8.615850e-47 |
| Msa0924930 | Msa1354480 | 0.870678 | 1.217223e-66 | -8.615850e-47 |
| Msa0924940 | Msa1354480 | 0.894363 | 2.647201e-75 | -8.615850e-47 |
| Msa0924990 | Msa1354480 | 0.808384 | 3.180732e-50 | -8.615850e-47 |
| Msa0925040 | Msa1354480 | 0.802411 | 5.681715e-49 | -8.615850e-47 |
| Msa0925100 | Msa1354480 | 0.855063 | 8.108516e-62 | -8.615850e-47 |
| Msa0925110 | Msa1354480 | 0.876624 | 1.204175e-68 | -8.615850e-47 |
| Msa0931070 | Msa1354480 | 0.820766 | 5.766657e-53 | -8.615850e-47 |
| Msa0931080 | Msa1354480 | 0.813366 | 2.654956e-51 | -8.615850e-47 |
| Msa0931130 | Msa1354480 | 0.823855 | 1.106007e-53 | -8.615850e-47 |
| Msa0931140 | Msa1354480 | 0.810988 | 8.766805e-51 | -8.615850e-47 |
| Msa0931160 | Msa1354480 | 0.804279 | 2.331666e-49 | -8.615850e-47 |
| Msa0931210 | Msa1354480 | 0.815731 | 7.953394e-52 | -8.615850e-47 |
| Msa0931220 | Msa1354480 | 0.832223 | 1.068344e-55 | -8.615850e-47 |
| Msa0931230 | Msa1354480 | 0.819379 | 1.197660e-52 | -8.615850e-47 |
| Msa0931240 | Msa1354480 | 0.822842 | 1.907839e-53 | -8.615850e-47 |
| Msa0931260 | Msa1354480 | 0.834550 | 2.808956e-56 | -8.615850e-47 |
| Msa0931270 | Msa1354480 | 0.828219 | 1.015436e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354480 | MtrunA17_CPg0492451 | 99.020 | 204 | 2 | 0 | 191 | 394 | 1 | 204 | 1.20e-144 | 409 |
| Msa1354480 | MtrunA17_Chr4g0016071 | 99.020 | 204 | 2 | 0 | 191 | 394 | 1 | 204 | 1.20e-144 | 409 |
| Msa1354480 | MtrunA17_Chr3g0090871 | 91.667 | 204 | 2 | 1 | 191 | 394 | 1 | 189 | 6.59e-127 | 363 |
| Msa1354480 | MtrunA17_Chr1g0195541 | 99.242 | 132 | 1 | 0 | 1 | 132 | 1 | 132 | 2.52e-88 | 264 |
| Msa1354480 | MtrunA17_CPg0492431 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 8.52e-87 | 265 |
| Msa1354480 | MtrunA17_Chr3g0090851 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 8.52e-87 | 265 |
| Msa1354480 | MtrunA17_Chr4g0016091 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 8.52e-87 | 265 |
| Msa1354480 | MtrunA17_Chr1g0153231 | 97.297 | 74 | 2 | 0 | 58 | 131 | 1 | 74 | 7.16e-44 | 147 |
| Msa1354480 | MtrunA17_Chr0c03g0489881 | 33.028 | 218 | 135 | 4 | 129 | 346 | 2 | 208 | 4.83e-27 | 107 |
| Msa1354480 | MtrunA17_MTg0491931 | 33.028 | 218 | 135 | 4 | 129 | 346 | 2 | 208 | 4.83e-27 | 107 |
| Msa1354480 | MtrunA17_CPg0492181 | 24.865 | 370 | 251 | 10 | 6 | 366 | 147 | 498 | 5.93e-18 | 85.9 |
| Msa1354480 | MtrunA17_Chr4g0000831 | 25.210 | 238 | 160 | 7 | 6 | 239 | 32 | 255 | 1.09e-13 | 71.2 |
| Msa1354480 | MtrunA17_Chr6g0466221 | 24.324 | 370 | 233 | 11 | 6 | 366 | 147 | 478 | 4.55e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354480 | ATCG00890.1 | 93.655 | 394 | 18 | 1 | 1 | 394 | 1 | 387 | 0.0 | 666 |
| Msa1354480 | ATCG01250.1 | 93.655 | 394 | 18 | 1 | 1 | 394 | 1 | 387 | 0.0 | 666 |
| Msa1354480 | AT2G07689.1 | 35.859 | 198 | 116 | 4 | 129 | 326 | 2 | 188 | 7.76e-27 | 107 |
| Msa1354480 | ATCG01010.1 | 26.490 | 302 | 199 | 8 | 9 | 301 | 130 | 417 | 4.55e-16 | 80.5 |
Find 85 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGATATGTAATTAT+TGG | 0.189063 | tig0014543:-299666 | Msa1354480:CDS |
| CATGGTTTCTCTTGGCTATA+TGG | 0.197078 | tig0014543:-300759 | Msa1354480:CDS |
| TGGGGCAAGCTCTTCTATTC+TGG | 0.197255 | tig0014543:-300784 | Msa1354480:CDS |
| GCTATTCTTAGCATGCTATT+AGG | 0.213688 | tig0014543:-299750 | Msa1354480:CDS |
| TTTGCTTGCATTGTGTTATT+TGG | 0.223841 | tig0014543:-299561 | Msa1354480:CDS |
| TCGGAAAACTTCATTTATTC+TGG | 0.226485 | tig0014543:-299413 | Msa1354480:CDS |
| ATGGAATTGTTTGATCTTAC+AGG | 0.227109 | tig0014543:+299240 | None:intergenic |
| GCACGTGAGGAGTTATTTCT+TGG | 0.274625 | tig0014543:+299280 | None:intergenic |
| ATTAGACCGTACATCTTTCT+TGG | 0.278852 | tig0014543:+300836 | None:intergenic |
| TCCTGAGCAATTTCAATAAT+GGG | 0.279137 | tig0014543:+299159 | None:intergenic |
| ATATTCATCACTGTAGGAAT+TGG | 0.280413 | tig0014543:-300645 | Msa1354480:CDS |
| TCGTTTGATGAGAAATAAAA+AGG | 0.282633 | tig0014543:+299798 | None:intergenic |
| AGCTCTTCTATTCTGGTTCA+TGG | 0.287942 | tig0014543:-300777 | Msa1354480:CDS |
| ATCCTGAGCAATTTCAATAA+TGG | 0.298192 | tig0014543:+299158 | None:intergenic |
| CTATTCTTAGCATGCTATTA+GGG | 0.301257 | tig0014543:-299749 | Msa1354480:CDS |
| TATTCGTCCATAGGTCAAAT+TGG | 0.303171 | tig0014543:-299681 | Msa1354480:CDS |
| GCAAGCAGGCCTATATTTCT+TGG | 0.316441 | tig0014543:-299382 | Msa1354480:CDS |
| GCATACGTTTCATGCTTGTT+TGG | 0.326865 | tig0014543:+299709 | None:intergenic |
| TTCTGGTTCATGGTTTCTCT+TGG | 0.336946 | tig0014543:-300767 | Msa1354480:CDS |
| TTATGCTCCTATCTACTATC+TGG | 0.367530 | tig0014543:-300864 | Msa1354480:CDS |
| CATACGTTTCATGCTTGTTT+GGG | 0.369828 | tig0014543:+299710 | None:intergenic |
| GTAATTATTGGAATAATTGT+TGG | 0.373428 | tig0014543:-299654 | Msa1354480:CDS |
| CTATATTTCTTGGTTTCAAT+AGG | 0.375317 | tig0014543:-299372 | Msa1354480:CDS |
| ATGGGGTTCATTGATATTCC+TGG | 0.380234 | tig0014543:+299177 | None:intergenic |
| CCCTAGCCCCTTCTCATCAA+TGG | 0.393307 | tig0014543:-300611 | Msa1354480:CDS |
| GTGTTATTTGGTCTACGTAC+TGG | 0.413420 | tig0014543:-299549 | Msa1354480:CDS |
| TATTCATCACTGTAGGAATT+GGG | 0.417349 | tig0014543:-300644 | Msa1354480:CDS |
| TCTTGGCTATATGGTTCGTC+CGG | 0.418558 | tig0014543:-300750 | Msa1354480:CDS |
| TACATATCCAATTTGACCTA+TGG | 0.420081 | tig0014543:+299674 | None:intergenic |
| TTCTGGTGTGGATGGCAAGC+AGG | 0.432708 | tig0014543:-299396 | Msa1354480:CDS |
| CTATTGAAACCAAGAAATAT+AGG | 0.436794 | tig0014543:+299373 | None:intergenic |
| GCCCTATGTCTATTATCCTT+AGG | 0.440840 | tig0014543:-299462 | Msa1354480:CDS |
| GGAGGTCTTCCTCCACTAGC+AGG | 0.443104 | tig0014543:-299441 | Msa1354480:CDS |
| AGCAAAAGTTCCTAGATTCA+TGG | 0.448640 | tig0014543:+299578 | None:intergenic |
| CCCCATTATTGAAATTGCTC+AGG | 0.459148 | tig0014543:-299160 | Msa1354480:CDS |
| TTCTATATCTCCATGAATCT+AGG | 0.460861 | tig0014543:-299588 | Msa1354480:CDS |
| CTTGGCTATATGGTTCGTCC+GGG | 0.468938 | tig0014543:-300749 | Msa1354480:CDS |
| TTCATTTATTCTGGTGTGGA+TGG | 0.469314 | tig0014543:-299404 | Msa1354480:CDS |
| TACTATGAAATATTTACTCA+TGG | 0.474204 | tig0014543:-300808 | Msa1354480:CDS |
| ATAATTAAGTTATTAATGAC+TGG | 0.481516 | tig0014543:-299309 | Msa1354480:CDS |
| GGTATATCCAGATAGTAGAT+AGG | 0.488329 | tig0014543:+300857 | None:intergenic |
| ATAAGCGCAATTGAAATTCC+AGG | 0.496050 | tig0014543:+300666 | None:intergenic |
| CTCACGTGCGAAATTATAGA+AGG | 0.502645 | tig0014543:-299266 | Msa1354480:CDS |
| TGAAATATTTACTCATGGGT+GGG | 0.506663 | tig0014543:-300803 | Msa1354480:CDS |
| TCCATTGATGAGAAGGGGCT+AGG | 0.510524 | tig0014543:+300610 | None:intergenic |
| ATGCTTGCTTATTCGTCCAT+AGG | 0.517225 | tig0014543:-299690 | Msa1354480:CDS |
| TTGAAGCTCTATCTCTCCCC+CGG | 0.517737 | tig0014543:+300731 | None:intergenic |
| AAACTTCATTTATTCTGGTG+TGG | 0.518432 | tig0014543:-299408 | Msa1354480:CDS |
| TTTATTTCTCATCAAACGAA+TGG | 0.522523 | tig0014543:-299794 | Msa1354480:CDS |
| ACACAAATGTATAACTCCCC+TGG | 0.530663 | tig0014543:-300684 | Msa1354480:CDS |
| GATAACATTCGAGATTATGC+AGG | 0.531827 | tig0014543:-299522 | Msa1354480:CDS |
| ATGAAATATTTACTCATGGG+TGG | 0.533610 | tig0014543:-300804 | Msa1354480:CDS |
| GAAATATTTACTCATGGGTG+GGG | 0.537789 | tig0014543:-300802 | Msa1354480:CDS |
| TATAATCATACTCAATTCGA+TGG | 0.542526 | tig0014543:+299221 | None:intergenic |
| CAGGAGTCCATTGATGAGAA+GGG | 0.542754 | tig0014543:+300604 | None:intergenic |
| GAGCTTCAAGAAATAGTGAA+TGG | 0.546870 | tig0014543:-300717 | Msa1354480:CDS |
| ATAATTGTTGGAGACTCAAA+TGG | 0.548093 | tig0014543:-299642 | Msa1354480:CDS |
| TCAGGAGTCCATTGATGAGA+AGG | 0.551074 | tig0014543:+300603 | None:intergenic |
| AGAAAAGCAACGACTGGAGT+CGG | 0.551106 | tig0014543:+299876 | None:intergenic |
| CCATTGATGAGAAGGGGCTA+GGG | 0.552174 | tig0014543:+300611 | None:intergenic |
| TTCATATTAACCGCTACTCT+AGG | 0.552712 | tig0014543:-300951 | Msa1354480:CDS |
| TCCTAAGGATAATAGACATA+GGG | 0.556597 | tig0014543:+299461 | None:intergenic |
| CTCCTAAGGATAATAGACAT+AGG | 0.558738 | tig0014543:+299460 | None:intergenic |
| GAAAGATGTACGGTCTAATG+AGG | 0.565206 | tig0014543:-300832 | Msa1354480:CDS |
| TAAGCGCAATTGAAATTCCA+GGG | 0.565360 | tig0014543:+300667 | None:intergenic |
| CTTCTATAATTTCGCACGTG+AGG | 0.565900 | tig0014543:+299267 | None:intergenic |
| GGAGAGTCAGAGTCGAAAAG+AGG | 0.572366 | tig0014543:+299897 | None:intergenic |
| TGGCTATATGGTTCGTCCGG+GGG | 0.574450 | tig0014543:-300747 | Msa1354480:CDS |
| ATAGCATGCTAAGAATAGCT+AGG | 0.576533 | tig0014543:+299754 | None:intergenic |
| TAGTGGAGGAAGACCTCCTA+AGG | 0.577052 | tig0014543:+299446 | None:intergenic |
| ACAGAAAGAAAAGCAACGAC+TGG | 0.577795 | tig0014543:+299870 | None:intergenic |
| TTGGCTATATGGTTCGTCCG+GGG | 0.582473 | tig0014543:-300748 | Msa1354480:CDS |
| ACTATGAAATATTTACTCAT+GGG | 0.584827 | tig0014543:-300807 | Msa1354480:CDS |
| CTATGTCTATTATCCTTAGG+AGG | 0.590927 | tig0014543:-299459 | Msa1354480:CDS |
| GCGCTTATATTCATCACTGT+AGG | 0.594447 | tig0014543:-300651 | Msa1354480:CDS |
| TTGAATGAGAGAAAGAAGTG+AGG | 0.599130 | tig0014543:-299923 | Msa1354480:intron |
| CCTGAGCAATTTCAATAATG+GGG | 0.604713 | tig0014543:+299160 | None:intergenic |
| ATATTAACCGCTACTCTAGG+AGG | 0.609728 | tig0014543:-300948 | Msa1354480:CDS |
| GTGATAGCATCTACTATACC+AGG | 0.610688 | tig0014543:-299195 | Msa1354480:CDS |
| GATATACCAAGAAAGATGTA+CGG | 0.625842 | tig0014543:-300842 | Msa1354480:CDS |
| ATTGTTGGAGACTCAAATGG+TGG | 0.626325 | tig0014543:-299639 | Msa1354480:CDS |
| AGGAGTCCATTGATGAGAAG+GGG | 0.632944 | tig0014543:+300605 | None:intergenic |
| AGGAATATCGAAAATTCGAG+TGG | 0.650147 | tig0014543:+299818 | None:intergenic |
| AAACATTCCTCCTAGAGTAG+CGG | 0.663526 | tig0014543:+300941 | None:intergenic |
| AAGCGCAATTGAAATTCCAG+GGG | 0.720091 | tig0014543:+300668 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTAAAATAACAATTA+AGG | - | tig0014543:299674-299693 | Msa1354480:CDS | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | - | tig0014543:299987-300006 | Msa1354480:intron | 15.0% |
| !! | ATAATTAAGTTATTAATGAC+TGG | - | tig0014543:300812-300831 | Msa1354480:CDS | 15.0% |
| !!! | ACTTGTTAAAATAACAATTA+AGG | - | tig0014543:299674-299693 | Msa1354480:CDS | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | - | tig0014543:299987-300006 | Msa1354480:intron | 15.0% |
| !! | ATAATTAAGTTATTAATGAC+TGG | - | tig0014543:300812-300831 | Msa1354480:CDS | 15.0% |
| !! | TACTATGAAATATTTACTCA+TGG | - | tig0014543:299313-299332 | Msa1354480:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | - | tig0014543:299314-299333 | Msa1354480:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | - | tig0014543:299743-299762 | Msa1354480:CDS | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | + | tig0014543:300064-300083 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | - | tig0014543:300064-300083 | Msa1354480:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | - | tig0014543:300455-300474 | Msa1354480:intron | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | - | tig0014543:300467-300486 | Msa1354480:intron | 20.0% |
| !! | TACTATGAAATATTTACTCA+TGG | - | tig0014543:299313-299332 | Msa1354480:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | - | tig0014543:299314-299333 | Msa1354480:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | - | tig0014543:299743-299762 | Msa1354480:CDS | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | + | tig0014543:300064-300083 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | - | tig0014543:300064-300083 | Msa1354480:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | - | tig0014543:300455-300474 | Msa1354480:intron | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | - | tig0014543:300467-300486 | Msa1354480:intron | 20.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | - | tig0014543:299603-299622 | Msa1354480:CDS | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | + | tig0014543:299662-299681 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | - | tig0014543:299744-299763 | Msa1354480:CDS | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | + | tig0014543:299775-299794 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | + | tig0014543:299803-299822 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | - | tig0014543:300070-300089 | Msa1354480:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | + | tig0014543:300139-300158 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | - | tig0014543:300143-300162 | Msa1354480:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | + | tig0014543:300326-300345 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | - | tig0014543:300327-300346 | Msa1354480:intron | 25.0% |
| !!! | ATACACAAAAGATCCTTTTT+TGG | - | tig0014543:300625-300644 | Msa1354480:CDS | 25.0% |
| ! | CTATTGAAACCAAGAAATAT+AGG | + | tig0014543:300751-300770 | None:intergenic | 25.0% |
| ! | CTATATTTCTTGGTTTCAAT+AGG | - | tig0014543:300749-300768 | Msa1354480:CDS | 25.0% |
| ! | TATAATCATACTCAATTCGA+TGG | + | tig0014543:300903-300922 | None:intergenic | 25.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | - | tig0014543:299603-299622 | Msa1354480:CDS | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | + | tig0014543:299662-299681 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | - | tig0014543:299744-299763 | Msa1354480:CDS | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | + | tig0014543:299775-299794 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | + | tig0014543:299803-299822 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | - | tig0014543:300070-300089 | Msa1354480:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | + | tig0014543:300139-300158 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | - | tig0014543:300143-300162 | Msa1354480:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | + | tig0014543:300326-300345 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | - | tig0014543:300327-300346 | Msa1354480:intron | 25.0% |
| !!! | ATACACAAAAGATCCTTTTT+TGG | - | tig0014543:300625-300644 | Msa1354480:CDS | 25.0% |
| ! | CTATTGAAACCAAGAAATAT+AGG | + | tig0014543:300751-300770 | None:intergenic | 25.0% |
| ! | CTATATTTCTTGGTTTCAAT+AGG | - | tig0014543:300749-300768 | Msa1354480:CDS | 25.0% |
| ! | TATAATCATACTCAATTCGA+TGG | + | tig0014543:300903-300922 | None:intergenic | 25.0% |
| GATATACCAAGAAAGATGTA+CGG | - | tig0014543:299279-299298 | Msa1354480:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | - | tig0014543:299317-299336 | Msa1354480:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | - | tig0014543:299318-299337 | Msa1354480:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | - | tig0014543:299476-299495 | Msa1354480:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | - | tig0014543:299477-299496 | Msa1354480:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | - | tig0014543:299584-299603 | Msa1354480:CDS | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | + | tig0014543:299849-299868 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | - | tig0014543:299849-299868 | Msa1354480:CDS | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | - | tig0014543:299949-299968 | Msa1354480:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | - | tig0014543:300372-300391 | Msa1354480:intron | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | + | tig0014543:300450-300469 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | - | tig0014543:300479-300498 | Msa1354480:intron | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | - | tig0014543:300533-300552 | Msa1354480:intron | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | - | tig0014543:300560-300579 | Msa1354480:intron | 30.0% |
| TCCTAAGGATAATAGACATA+GGG | + | tig0014543:300663-300682 | None:intergenic | 30.0% | |
| TCGGAAAACTTCATTTATTC+TGG | - | tig0014543:300708-300727 | Msa1354480:CDS | 30.0% | |
| AAACTTCATTTATTCTGGTG+TGG | - | tig0014543:300713-300732 | Msa1354480:CDS | 30.0% | |
| ATGGAATTGTTTGATCTTAC+AGG | + | tig0014543:300884-300903 | None:intergenic | 30.0% | |
| TCCTGAGCAATTTCAATAAT+GGG | + | tig0014543:300965-300984 | None:intergenic | 30.0% | |
| ATCCTGAGCAATTTCAATAA+TGG | + | tig0014543:300966-300985 | None:intergenic | 30.0% | |
| GATATACCAAGAAAGATGTA+CGG | - | tig0014543:299279-299298 | Msa1354480:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | - | tig0014543:299317-299336 | Msa1354480:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | - | tig0014543:299318-299337 | Msa1354480:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | - | tig0014543:299476-299495 | Msa1354480:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | - | tig0014543:299477-299496 | Msa1354480:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | - | tig0014543:299584-299603 | Msa1354480:CDS | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | + | tig0014543:299849-299868 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | - | tig0014543:299849-299868 | Msa1354480:CDS | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | - | tig0014543:299949-299968 | Msa1354480:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | - | tig0014543:300372-300391 | Msa1354480:intron | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | + | tig0014543:300450-300469 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | - | tig0014543:300479-300498 | Msa1354480:intron | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | - | tig0014543:300533-300552 | Msa1354480:intron | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | - | tig0014543:300560-300579 | Msa1354480:intron | 30.0% |
| TCCTAAGGATAATAGACATA+GGG | + | tig0014543:300663-300682 | None:intergenic | 30.0% | |
| TCGGAAAACTTCATTTATTC+TGG | - | tig0014543:300708-300727 | Msa1354480:CDS | 30.0% | |
| AAACTTCATTTATTCTGGTG+TGG | - | tig0014543:300713-300732 | Msa1354480:CDS | 30.0% | |
| ATGGAATTGTTTGATCTTAC+AGG | + | tig0014543:300884-300903 | None:intergenic | 30.0% | |
| TCCTGAGCAATTTCAATAAT+GGG | + | tig0014543:300965-300984 | None:intergenic | 30.0% | |
| ATCCTGAGCAATTTCAATAA+TGG | + | tig0014543:300966-300985 | None:intergenic | 30.0% | |
| TTCATATTAACCGCTACTCT+AGG | - | tig0014543:299170-299189 | Msa1354480:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | - | tig0014543:299257-299276 | Msa1354480:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | + | tig0014543:299267-299286 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | + | tig0014543:299288-299307 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | - | tig0014543:299319-299338 | Msa1354480:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | - | tig0014543:299404-299423 | Msa1354480:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | + | tig0014543:299457-299476 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | + | tig0014543:299458-299477 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | + | tig0014543:299578-299597 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | + | tig0014543:299582-299601 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | - | tig0014543:299716-299735 | Msa1354480:CDS | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | + | tig0014543:299726-299745 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | + | tig0014543:299751-299770 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | - | tig0014543:299816-299835 | Msa1354480:CDS | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | - | tig0014543:299921-299940 | Msa1354480:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | + | tig0014543:299957-299976 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | - | tig0014543:299958-299977 | Msa1354480:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | + | tig0014543:299977-299996 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | - | tig0014543:300198-300217 | Msa1354480:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | + | tig0014543:300306-300325 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | + | tig0014543:300370-300389 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | - | tig0014543:300371-300390 | Msa1354480:intron | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | + | tig0014543:300414-300433 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | - | tig0014543:300440-300459 | Msa1354480:intron | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | + | tig0014543:300546-300565 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | - | tig0014543:300599-300618 | Msa1354480:intron | 35.0% | |
| CTCCTAAGGATAATAGACAT+AGG | + | tig0014543:300664-300683 | None:intergenic | 35.0% | |
| CTATGTCTATTATCCTTAGG+AGG | - | tig0014543:300662-300681 | Msa1354480:CDS | 35.0% | |
| TTCATTTATTCTGGTGTGGA+TGG | - | tig0014543:300717-300736 | Msa1354480:CDS | 35.0% | |
| CCTGAGCAATTTCAATAATG+GGG | + | tig0014543:300964-300983 | None:intergenic | 35.0% | |
| TTCATATTAACCGCTACTCT+AGG | - | tig0014543:299170-299189 | Msa1354480:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | - | tig0014543:299257-299276 | Msa1354480:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | + | tig0014543:299267-299286 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | + | tig0014543:299288-299307 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | - | tig0014543:299319-299338 | Msa1354480:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | - | tig0014543:299404-299423 | Msa1354480:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | + | tig0014543:299457-299476 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | + | tig0014543:299458-299477 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | + | tig0014543:299578-299597 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | + | tig0014543:299582-299601 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | - | tig0014543:299716-299735 | Msa1354480:CDS | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | + | tig0014543:299726-299745 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | + | tig0014543:299751-299770 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | - | tig0014543:299816-299835 | Msa1354480:CDS | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | - | tig0014543:299921-299940 | Msa1354480:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | + | tig0014543:299957-299976 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | - | tig0014543:299958-299977 | Msa1354480:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | + | tig0014543:299977-299996 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | - | tig0014543:300198-300217 | Msa1354480:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | + | tig0014543:300306-300325 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | + | tig0014543:300370-300389 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | - | tig0014543:300371-300390 | Msa1354480:intron | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | + | tig0014543:300414-300433 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | - | tig0014543:300440-300459 | Msa1354480:intron | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | + | tig0014543:300546-300565 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | - | tig0014543:300599-300618 | Msa1354480:intron | 35.0% | |
| CTCCTAAGGATAATAGACAT+AGG | + | tig0014543:300664-300683 | None:intergenic | 35.0% | |
| CTATGTCTATTATCCTTAGG+AGG | - | tig0014543:300662-300681 | Msa1354480:CDS | 35.0% | |
| TTCATTTATTCTGGTGTGGA+TGG | - | tig0014543:300717-300736 | Msa1354480:CDS | 35.0% | |
| CCTGAGCAATTTCAATAATG+GGG | + | tig0014543:300964-300983 | None:intergenic | 35.0% | |
| ATATTAACCGCTACTCTAGG+AGG | - | tig0014543:299173-299192 | Msa1354480:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | + | tig0014543:299183-299202 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | - | tig0014543:299289-299308 | Msa1354480:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | - | tig0014543:299344-299363 | Msa1354480:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | - | tig0014543:299354-299373 | Msa1354480:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | - | tig0014543:299362-299381 | Msa1354480:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | - | tig0014543:299437-299456 | Msa1354480:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | + | tig0014543:299456-299475 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | - | tig0014543:299470-299489 | Msa1354480:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | - | tig0014543:299689-299708 | Msa1354480:CDS | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | - | tig0014543:299717-299736 | Msa1354480:CDS | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | + | tig0014543:299725-299744 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | + | tig0014543:299880-299899 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | + | tig0014543:299898-299917 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | + | tig0014543:299899-299918 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | - | tig0014543:300010-300029 | Msa1354480:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | - | tig0014543:300029-300048 | Msa1354480:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | - | tig0014543:300035-300054 | Msa1354480:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | + | tig0014543:300039-300058 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | + | tig0014543:300254-300273 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | + | tig0014543:300415-300434 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | - | tig0014543:300431-300450 | Msa1354480:intron | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | - | tig0014543:300482-300501 | Msa1354480:intron | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | - | tig0014543:300572-300591 | Msa1354480:intron | 40.0% |
| GCTAAAGAGAGAGCCAAAAA+AGG | + | tig0014543:300641-300660 | None:intergenic | 40.0% | |
| GCCCTATGTCTATTATCCTT+AGG | - | tig0014543:300659-300678 | Msa1354480:CDS | 40.0% | |
| TTTCCGAAAAAACCTGCTAG+TGG | + | tig0014543:300695-300714 | None:intergenic | 40.0% | |
| CTTCTATAATTTCGCACGTG+AGG | + | tig0014543:300857-300876 | None:intergenic | 40.0% | |
| CTCACGTGCGAAATTATAGA+AGG | - | tig0014543:300855-300874 | Msa1354480:CDS | 40.0% | |
| GTGATAGCATCTACTATACC+AGG | - | tig0014543:300926-300945 | Msa1354480:CDS | 40.0% | |
| ATGGGGTTCATTGATATTCC+TGG | + | tig0014543:300947-300966 | None:intergenic | 40.0% | |
| CCCCATTATTGAAATTGCTC+AGG | - | tig0014543:300961-300980 | Msa1354480:CDS | 40.0% | |
| ATATTAACCGCTACTCTAGG+AGG | - | tig0014543:299173-299192 | Msa1354480:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | + | tig0014543:299183-299202 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | - | tig0014543:299289-299308 | Msa1354480:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | - | tig0014543:299344-299363 | Msa1354480:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | - | tig0014543:299354-299373 | Msa1354480:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | - | tig0014543:299362-299381 | Msa1354480:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | - | tig0014543:299437-299456 | Msa1354480:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | + | tig0014543:299456-299475 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | - | tig0014543:299470-299489 | Msa1354480:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | - | tig0014543:299689-299708 | Msa1354480:CDS | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | - | tig0014543:299717-299736 | Msa1354480:CDS | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | + | tig0014543:299725-299744 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | + | tig0014543:299880-299899 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | + | tig0014543:299898-299917 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | + | tig0014543:299899-299918 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | - | tig0014543:300010-300029 | Msa1354480:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | - | tig0014543:300029-300048 | Msa1354480:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | - | tig0014543:300035-300054 | Msa1354480:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | + | tig0014543:300039-300058 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | + | tig0014543:300254-300273 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | + | tig0014543:300415-300434 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | - | tig0014543:300431-300450 | Msa1354480:intron | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | - | tig0014543:300482-300501 | Msa1354480:intron | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | - | tig0014543:300572-300591 | Msa1354480:intron | 40.0% |
| GCTAAAGAGAGAGCCAAAAA+AGG | + | tig0014543:300641-300660 | None:intergenic | 40.0% | |
| GCCCTATGTCTATTATCCTT+AGG | - | tig0014543:300659-300678 | Msa1354480:CDS | 40.0% | |
| TTTCCGAAAAAACCTGCTAG+TGG | + | tig0014543:300695-300714 | None:intergenic | 40.0% | |
| CTTCTATAATTTCGCACGTG+AGG | + | tig0014543:300857-300876 | None:intergenic | 40.0% | |
| CTCACGTGCGAAATTATAGA+AGG | - | tig0014543:300855-300874 | Msa1354480:CDS | 40.0% | |
| GTGATAGCATCTACTATACC+AGG | - | tig0014543:300926-300945 | Msa1354480:CDS | 40.0% | |
| ATGGGGTTCATTGATATTCC+TGG | + | tig0014543:300947-300966 | None:intergenic | 40.0% | |
| CCCCATTATTGAAATTGCTC+AGG | - | tig0014543:300961-300980 | Msa1354480:CDS | 40.0% | |
| TCTTGGCTATATGGTTCGTC+CGG | - | tig0014543:299371-299390 | Msa1354480:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | + | tig0014543:299519-299538 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | + | tig0014543:299520-299539 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | + | tig0014543:299521-299540 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | - | tig0014543:299530-299549 | Msa1354480:CDS | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | - | tig0014543:299537-299556 | Msa1354480:CDS | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | - | tig0014543:299635-299654 | Msa1354480:CDS | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | + | tig0014543:299652-299671 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | + | tig0014543:299653-299672 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | - | tig0014543:299704-299723 | Msa1354480:CDS | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | - | tig0014543:299868-299887 | Msa1354480:CDS | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | + | tig0014543:300023-300042 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | - | tig0014543:300088-300107 | Msa1354480:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | - | tig0014543:300092-300111 | Msa1354480:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | + | tig0014543:300171-300190 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | - | tig0014543:300173-300192 | Msa1354480:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | + | tig0014543:300248-300267 | None:intergenic | 45.0% | |
| !!! | CCTCCACTAGCAGGTTTTTT+CGG | - | tig0014543:300689-300708 | Msa1354480:CDS | 45.0% |
| GCAAGCAGGCCTATATTTCT+TGG | - | tig0014543:300739-300758 | Msa1354480:CDS | 45.0% | |
| !! | GCACGTGAGGAGTTATTTCT+TGG | + | tig0014543:300844-300863 | None:intergenic | 45.0% |
| TCTTGGCTATATGGTTCGTC+CGG | - | tig0014543:299371-299390 | Msa1354480:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | + | tig0014543:299519-299538 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | + | tig0014543:299520-299539 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | + | tig0014543:299521-299540 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | - | tig0014543:299530-299549 | Msa1354480:CDS | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | - | tig0014543:299537-299556 | Msa1354480:CDS | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | - | tig0014543:299635-299654 | Msa1354480:CDS | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | + | tig0014543:299652-299671 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | + | tig0014543:299653-299672 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | - | tig0014543:299704-299723 | Msa1354480:CDS | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | - | tig0014543:299868-299887 | Msa1354480:CDS | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | + | tig0014543:300023-300042 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | - | tig0014543:300088-300107 | Msa1354480:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | - | tig0014543:300092-300111 | Msa1354480:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | + | tig0014543:300171-300190 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | - | tig0014543:300173-300192 | Msa1354480:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | + | tig0014543:300248-300267 | None:intergenic | 45.0% | |
| !!! | CCTCCACTAGCAGGTTTTTT+CGG | - | tig0014543:300689-300708 | Msa1354480:CDS | 45.0% |
| GCAAGCAGGCCTATATTTCT+TGG | - | tig0014543:300739-300758 | Msa1354480:CDS | 45.0% | |
| !! | GCACGTGAGGAGTTATTTCT+TGG | + | tig0014543:300844-300863 | None:intergenic | 45.0% |
| TGGGGCAAGCTCTTCTATTC+TGG | - | tig0014543:299337-299356 | Msa1354480:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | - | tig0014543:299372-299391 | Msa1354480:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | - | tig0014543:299373-299392 | Msa1354480:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | + | tig0014543:299393-299412 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | + | tig0014543:299513-299532 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | + | tig0014543:299514-299533 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | + | tig0014543:299539-299558 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | + | tig0014543:299969-299988 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | + | tig0014543:300227-300246 | None:intergenic | 50.0% | |
| TAGTGGAGGAAGACCTCCTA+AGG | + | tig0014543:300678-300697 | None:intergenic | 50.0% | |
| CCGAAAAAACCTGCTAGTGG+AGG | + | tig0014543:300692-300711 | None:intergenic | 50.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | - | tig0014543:299337-299356 | Msa1354480:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | - | tig0014543:299372-299391 | Msa1354480:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | - | tig0014543:299373-299392 | Msa1354480:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | + | tig0014543:299393-299412 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | + | tig0014543:299513-299532 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | + | tig0014543:299514-299533 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | + | tig0014543:299539-299558 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | + | tig0014543:299969-299988 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | + | tig0014543:300227-300246 | None:intergenic | 50.0% | |
| TAGTGGAGGAAGACCTCCTA+AGG | + | tig0014543:300678-300697 | None:intergenic | 50.0% | |
| CCGAAAAAACCTGCTAGTGG+AGG | + | tig0014543:300692-300711 | None:intergenic | 50.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | - | tig0014543:299374-299393 | Msa1354480:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | - | tig0014543:299510-299529 | Msa1354480:CDS | 55.0% | |
| TTCTGGTGTGGATGGCAAGC+AGG | - | tig0014543:300725-300744 | Msa1354480:CDS | 55.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | - | tig0014543:299374-299393 | Msa1354480:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | - | tig0014543:299510-299529 | Msa1354480:CDS | 55.0% | |
| TTCTGGTGTGGATGGCAAGC+AGG | - | tig0014543:300725-300744 | Msa1354480:CDS | 55.0% | |
| GGAGGTCTTCCTCCACTAGC+AGG | - | tig0014543:300680-300699 | Msa1354480:CDS | 60.0% | |
| GGAGGTCTTCCTCCACTAGC+AGG | - | tig0014543:300680-300699 | Msa1354480:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0014543 | gene | 299146 | 300997 | 299146 | ID=Msa1354480;Name=Msa1354480 |
| tig0014543 | mRNA | 299146 | 300997 | 299146 | ID=Msa1354480-mRNA-1;Parent=Msa1354480;Name=Msa1354480-mRNA-1;_AED=0.80;_eAED=0.80;_QI=0|0|0|0.5|1|1|2|0|394 |
| tig0014543 | exon | 300602 | 300997 | 300602 | ID=Msa1354480-mRNA-1:exon:9150;Parent=Msa1354480-mRNA-1 |
| tig0014543 | exon | 299146 | 299934 | 299146 | ID=Msa1354480-mRNA-1:exon:9149;Parent=Msa1354480-mRNA-1 |
| tig0014543 | CDS | 300602 | 300997 | 300602 | ID=Msa1354480-mRNA-1:cds;Parent=Msa1354480-mRNA-1 |
| tig0014543 | CDS | 299146 | 299934 | 299146 | ID=Msa1354480-mRNA-1:cds;Parent=Msa1354480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
