Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354820 | BBN70062.1 | 96.717 | 396 | 11 | 1 | 1 | 394 | 86 | 481 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354820 | sp|P0CC61|NU2C2_EUCGG | 94.416 | 394 | 15 | 1 | 1 | 394 | 124 | 510 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354820 | A0A5H2XTJ1 | 96.717 | 396 | 11 | 1 | 1 | 394 | 86 | 481 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095150 | Msa1354820 | 0.845394 | 4.172804e-59 | -8.615850e-47 |
| Msa0095190 | Msa1354820 | 0.830263 | 3.240963e-55 | -8.615850e-47 |
| Msa0095230 | Msa1354820 | 0.811146 | 8.100146e-51 | -8.615850e-47 |
| Msa0095280 | Msa1354820 | 0.804083 | 2.560866e-49 | -8.615850e-47 |
| Msa1354420 | Msa1354820 | 0.867422 | 1.385229e-65 | -8.615850e-47 |
| Msa1354430 | Msa1354820 | 0.944270 | 2.652470e-103 | -8.615850e-47 |
| Msa1354480 | Msa1354820 | 0.907752 | 3.607514e-81 | -8.615850e-47 |
| Msa1354490 | Msa1354820 | 0.847486 | 1.121996e-59 | -8.615850e-47 |
| Msa1354500 | Msa1354820 | 0.849660 | 2.804070e-60 | -8.615850e-47 |
| Msa1354550 | Msa1354820 | 0.871922 | 4.722004e-67 | -8.615850e-47 |
| Msa1354560 | Msa1354820 | 0.906551 | 1.314753e-80 | -8.615850e-47 |
| Msa1354610 | Msa1354820 | 0.904668 | 9.648984e-80 | -8.615850e-47 |
| Msa1354620 | Msa1354820 | 0.864850 | 9.035277e-65 | -8.615850e-47 |
| Msa1354630 | Msa1354820 | 0.848728 | 5.094322e-60 | -8.615850e-47 |
| Msa1354680 | Msa1354820 | 0.834707 | 2.564573e-56 | -8.615850e-47 |
| Msa1354690 | Msa1354820 | 0.854400 | 1.262745e-61 | -8.615850e-47 |
| Msa1354700 | Msa1354820 | 0.902360 | 1.050027e-78 | -8.615850e-47 |
| Msa1354740 | Msa1354820 | 0.896721 | 2.810968e-76 | -8.615850e-47 |
| Msa1354750 | Msa1354820 | 0.848846 | 4.723218e-60 | -8.615850e-47 |
| Msa1354760 | Msa1354820 | 0.842576 | 2.376396e-58 | -8.615850e-47 |
| Msa1354810 | Msa1354820 | 0.869836 | 2.297185e-66 | -8.615850e-47 |
| Msa1354820 | Msa1354860 | 0.821007 | 5.074857e-53 | -8.615850e-47 |
| Msa1354820 | Msa1354880 | 0.801815 | 7.533754e-49 | -8.615850e-47 |
| Msa1354820 | Msa1354900 | 0.808655 | 2.783977e-50 | -8.615850e-47 |
| Msa1354820 | Msa1354920 | 0.837015 | 6.670610e-57 | -8.615850e-47 |
| Msa1354820 | Msa1354930 | 0.807547 | 4.793422e-50 | -8.615850e-47 |
| Msa1354820 | Msa1354980 | 0.871539 | 6.327513e-67 | -8.615850e-47 |
| Msa1354820 | Msa1354990 | 0.941557 | 3.377328e-101 | -8.615850e-47 |
| Msa1354820 | Msa1355030 | 0.809185 | 2.143626e-50 | -8.615850e-47 |
| Msa1354820 | Msa1355070 | 0.804143 | 2.488051e-49 | -8.615850e-47 |
| Msa1354820 | Msa1355080 | 0.817865 | 2.642207e-52 | -8.615850e-47 |
| Msa1354820 | Msa1355090 | 0.843966 | 1.012140e-58 | -8.615850e-47 |
| Msa1354820 | Msa1355100 | 0.811918 | 5.504383e-51 | -8.615850e-47 |
| Msa1354820 | Msa1365890 | 0.869756 | 2.438559e-66 | -8.615850e-47 |
| Msa1354820 | Msa1365900 | 0.858164 | 9.942555e-63 | -8.615850e-47 |
| Msa1354820 | Msa1365950 | 0.917858 | 3.180461e-86 | -8.615850e-47 |
| Msa1354820 | Msa1365960 | 0.818092 | 2.347273e-52 | -8.615850e-47 |
| Msa1354820 | Msa1365970 | 0.842578 | 2.373342e-58 | -8.615850e-47 |
| Msa1354820 | Msa1366080 | 0.878081 | 3.745777e-69 | -8.615850e-47 |
| Msa1354820 | Msa1366090 | 0.878190 | 3.431300e-69 | -8.615850e-47 |
| Msa1354820 | Msa1368230 | 0.852827 | 3.575697e-61 | -8.615850e-47 |
| Msa1354820 | Msa1368240 | 0.851759 | 7.199034e-61 | -8.615850e-47 |
| Msa1354820 | Msa1380570 | 0.801030 | 1.091165e-48 | -8.615850e-47 |
| Msa1354820 | Msa1380590 | 0.815598 | 8.514878e-52 | -8.615850e-47 |
| Msa1354820 | Msa1380600 | 0.803832 | 2.887537e-49 | -8.615850e-47 |
| Msa1354820 | Msa1380610 | 0.840162 | 1.026307e-57 | -8.615850e-47 |
| Msa1354820 | Msa1380620 | 0.832585 | 8.689707e-56 | -8.615850e-47 |
| Msa1354820 | Msa1385410 | 0.859146 | 5.061535e-63 | -8.615850e-47 |
| Msa1354820 | Msa1385420 | 0.881278 | 2.742063e-70 | -8.615850e-47 |
| Msa1354820 | Msa1391090 | 0.914153 | 2.678063e-84 | -8.615850e-47 |
| Msa1354820 | Msa1391100 | 0.851867 | 6.709289e-61 | -8.615850e-47 |
| Msa1354820 | Msa1391110 | 0.839644 | 1.401150e-57 | -8.615850e-47 |
| Msa1354820 | Msa1391160 | 0.862751 | 4.060278e-64 | -8.615850e-47 |
| Msa1354820 | Msa1391170 | 0.898626 | 4.410271e-77 | -8.615850e-47 |
| Msa1354820 | Msa1391220 | 0.911266 | 7.385018e-83 | -8.615850e-47 |
| Msa1354820 | Msa1391230 | 0.839003 | 2.054148e-57 | -8.615850e-47 |
| Msa1354820 | Msa1391240 | 0.857057 | 2.115468e-62 | -8.615850e-47 |
| Msa1354820 | Msa1394030 | 0.840341 | 9.220498e-58 | -8.615850e-47 |
| Msa1354820 | Msa1394040 | 0.825522 | 4.478349e-54 | -8.615850e-47 |
| Msa1354820 | Msa1394080 | 0.825942 | 3.560232e-54 | -8.615850e-47 |
| Msa1354820 | Msa1394110 | 0.813516 | 2.460593e-51 | -8.615850e-47 |
| Msa1354820 | Msa1394130 | 0.803766 | 2.980522e-49 | -8.615850e-47 |
| Msa1354820 | Msa1394150 | 0.818710 | 1.700806e-52 | -8.615850e-47 |
| Msa1354820 | Msa1394160 | 0.830541 | 2.770574e-55 | -8.615850e-47 |
| Msa1354820 | Msa1394210 | 0.824459 | 7.980963e-54 | -8.615850e-47 |
| Msa1354820 | Msa1394220 | 0.833473 | 5.226345e-56 | -8.615850e-47 |
| Msa1354820 | Msa1394230 | 0.815825 | 7.579700e-52 | -8.615850e-47 |
| Msa1354820 | Msa1394270 | 0.822012 | 2.974007e-53 | -8.615850e-47 |
| Msa1354820 | Msa1460120 | 0.842332 | 2.759203e-58 | -8.615850e-47 |
| Msa1354820 | Msa1460130 | 0.888078 | 8.122181e-73 | -8.615850e-47 |
| Msa0611450 | Msa1354820 | 0.806200 | 9.230943e-50 | -8.615850e-47 |
| Msa0694170 | Msa1354820 | 0.808887 | 2.482886e-50 | -8.615850e-47 |
| Msa0139810 | Msa1354820 | 0.800301 | 1.536789e-48 | -8.615850e-47 |
| Msa0202640 | Msa1354820 | 0.835069 | 2.079285e-56 | -8.615850e-47 |
| Msa0221840 | Msa1354820 | 0.808075 | 3.701302e-50 | -8.615850e-47 |
| Msa1305090 | Msa1354820 | 0.813436 | 2.562180e-51 | -8.615850e-47 |
| Msa1342040 | Msa1354820 | 0.806776 | 6.980105e-50 | -8.615850e-47 |
| Msa0370210 | Msa1354820 | 0.836558 | 8.719955e-57 | -8.615850e-47 |
| Msa0398630 | Msa1354820 | 0.809134 | 2.198436e-50 | -8.615850e-47 |
| Msa0405420 | Msa1354820 | 0.869431 | 3.112250e-66 | -8.615850e-47 |
| Msa0405430 | Msa1354820 | 0.851904 | 6.549396e-61 | -8.615850e-47 |
| Msa0405440 | Msa1354820 | 0.853294 | 2.628027e-61 | -8.615850e-47 |
| Msa0405510 | Msa1354820 | 0.876792 | 1.053516e-68 | -8.615850e-47 |
| Msa0405520 | Msa1354820 | 0.852163 | 5.529326e-61 | -8.615850e-47 |
| Msa0405530 | Msa1354820 | 0.834786 | 2.450671e-56 | -8.615850e-47 |
| Msa0459400 | Msa1354820 | 0.806886 | 6.614456e-50 | -8.615850e-47 |
| Msa0983630 | Msa1354820 | 0.864424 | 1.227929e-64 | -8.615850e-47 |
| Msa0983640 | Msa1354820 | 0.882187 | 1.285510e-70 | -8.615850e-47 |
| Msa0983680 | Msa1354820 | 0.800099 | 1.689228e-48 | -8.615850e-47 |
| Msa0983720 | Msa1354820 | 0.810810 | 9.579500e-51 | -8.615850e-47 |
| Msa1022050 | Msa1354820 | 0.867342 | 1.469358e-65 | -8.615850e-47 |
| Msa1022060 | Msa1354820 | 0.878118 | 3.637142e-69 | -8.615850e-47 |
| Msa1064410 | Msa1354820 | 0.822276 | 2.583023e-53 | -8.615850e-47 |
| Msa1086070 | Msa1354820 | 0.826524 | 2.588375e-54 | -8.615850e-47 |
| Msa1086080 | Msa1354820 | 0.814542 | 1.460936e-51 | -8.615850e-47 |
| Msa1086090 | Msa1354820 | 0.824264 | 8.867448e-54 | -8.615850e-47 |
| Msa1086140 | Msa1354820 | 0.826139 | 3.196714e-54 | -8.615850e-47 |
| Msa1086150 | Msa1354820 | 0.811322 | 7.419671e-51 | -8.615850e-47 |
| Msa1086180 | Msa1354820 | 0.822723 | 2.034022e-53 | -8.615850e-47 |
| Msa1086190 | Msa1354820 | 0.810901 | 9.154202e-51 | -8.615850e-47 |
| Msa1086200 | Msa1354820 | 0.837535 | 4.907699e-57 | -8.615850e-47 |
| Msa1086250 | Msa1354820 | 0.814880 | 1.229953e-51 | -8.615850e-47 |
| Msa1086270 | Msa1354820 | 0.835467 | 1.649850e-56 | -8.615850e-47 |
| Msa1086280 | Msa1354820 | 0.816901 | 4.354292e-52 | -8.615850e-47 |
| Msa1086320 | Msa1354820 | 0.826991 | 2.001493e-54 | -8.615850e-47 |
| Msa1086380 | Msa1354820 | 0.819206 | 1.311909e-52 | -8.615850e-47 |
| Msa1086420 | Msa1354820 | 0.819678 | 1.023846e-52 | -8.615850e-47 |
| Msa1086450 | Msa1354820 | 0.823839 | 1.116037e-53 | -8.615850e-47 |
| Msa1086470 | Msa1354820 | 0.804977 | 1.667453e-49 | -8.615850e-47 |
| Msa1086510 | Msa1354820 | 0.837263 | 5.762277e-57 | -8.615850e-47 |
| Msa1086550 | Msa1354820 | 0.885532 | 7.500010e-72 | -8.615850e-47 |
| Msa1086590 | Msa1354820 | 0.829246 | 5.731684e-55 | -8.615850e-47 |
| Msa1086600 | Msa1354820 | 0.904832 | 8.121657e-80 | -8.615850e-47 |
| Msa1086680 | Msa1354820 | 0.820296 | 7.392549e-53 | -8.615850e-47 |
| Msa1086720 | Msa1354820 | 0.903719 | 2.592335e-79 | -8.615850e-47 |
| Msa1086730 | Msa1354820 | 0.860445 | 2.054879e-63 | -8.615850e-47 |
| Msa1086740 | Msa1354820 | 0.847646 | 1.013505e-59 | -8.615850e-47 |
| Msa1086790 | Msa1354820 | 0.863001 | 3.399788e-64 | -8.615850e-47 |
| Msa1086800 | Msa1354820 | 0.908462 | 1.664701e-81 | -8.615850e-47 |
| Msa1086840 | Msa1354820 | 0.816977 | 4.186269e-52 | -8.615850e-47 |
| Msa1086880 | Msa1354820 | 0.821237 | 4.493439e-53 | -8.615850e-47 |
| Msa1086890 | Msa1354820 | 0.816640 | 4.982536e-52 | -8.615850e-47 |
| Msa1086900 | Msa1354820 | 0.841161 | 5.619651e-58 | -8.615850e-47 |
| Msa1086960 | Msa1354820 | 0.878019 | 3.937648e-69 | -8.615850e-47 |
| Msa1086970 | Msa1354820 | 0.903440 | 3.461888e-79 | -8.615850e-47 |
| Msa1087030 | Msa1354820 | 0.884982 | 1.203627e-71 | -8.615850e-47 |
| Msa1087040 | Msa1354820 | 0.861758 | 8.191002e-64 | -8.615850e-47 |
| Msa1087050 | Msa1354820 | 0.857990 | 1.120053e-62 | -8.615850e-47 |
| Msa1087110 | Msa1354820 | 0.857011 | 2.181637e-62 | -8.615850e-47 |
| Msa1087120 | Msa1354820 | 0.902009 | 1.501246e-78 | -8.615850e-47 |
| Msa0263770 | Msa1354820 | 0.840996 | 6.209357e-58 | -8.615850e-47 |
| Msa0268170 | Msa1354820 | 0.816520 | 5.300694e-52 | -8.615850e-47 |
| Msa0268190 | Msa1354820 | 0.810909 | 9.118644e-51 | -8.615850e-47 |
| Msa0268210 | Msa1354820 | 0.825081 | 5.693454e-54 | -8.615850e-47 |
| Msa0268250 | Msa1354820 | 0.890508 | 9.251480e-74 | -8.615850e-47 |
| Msa0268260 | Msa1354820 | 0.846566 | 2.004495e-59 | -8.615850e-47 |
| Msa0268270 | Msa1354820 | 0.838889 | 2.198497e-57 | -8.615850e-47 |
| Msa0268300 | Msa1354820 | 0.855117 | 7.822825e-62 | -8.615850e-47 |
| Msa0268310 | Msa1354820 | 0.904596 | 1.040365e-79 | -8.615850e-47 |
| Msa0268350 | Msa1354820 | 0.808564 | 2.911218e-50 | -8.615850e-47 |
| Msa0268390 | Msa1354820 | 0.816689 | 4.857359e-52 | -8.615850e-47 |
| Msa0268400 | Msa1354820 | 0.827036 | 1.952541e-54 | -8.615850e-47 |
| Msa0268410 | Msa1354820 | 0.827102 | 1.882738e-54 | -8.615850e-47 |
| Msa0268450 | Msa1354820 | 0.827702 | 1.352264e-54 | -8.615850e-47 |
| Msa0268510 | Msa1354820 | 0.801128 | 1.041826e-48 | -8.615850e-47 |
| Msa0268550 | Msa1354820 | 0.824441 | 8.059954e-54 | -8.615850e-47 |
| Msa0268560 | Msa1354820 | 0.810132 | 1.342102e-50 | -8.615850e-47 |
| Msa0268570 | Msa1354820 | 0.830121 | 3.510829e-55 | -8.615850e-47 |
| Msa0268580 | Msa1354820 | 0.813217 | 2.862693e-51 | -8.615850e-47 |
| Msa0268610 | Msa1354820 | 0.801241 | 9.881667e-49 | -8.615850e-47 |
| Msa0268630 | Msa1354820 | 0.816909 | 4.337291e-52 | -8.615850e-47 |
| Msa0268670 | Msa1354820 | 0.827883 | 1.223503e-54 | -8.615850e-47 |
| Msa0268740 | Msa1354820 | 0.821607 | 3.689513e-53 | -8.615850e-47 |
| Msa0268750 | Msa1354820 | 0.839392 | 1.628863e-57 | -8.615850e-47 |
| Msa0268830 | Msa1354820 | 0.824114 | 9.618749e-54 | -8.615850e-47 |
| Msa0268840 | Msa1354820 | 0.806377 | 8.474103e-50 | -8.615850e-47 |
| Msa0268860 | Msa1354820 | 0.800128 | 1.666854e-48 | -8.615850e-47 |
| Msa0268880 | Msa1354820 | 0.833529 | 5.061352e-56 | -8.615850e-47 |
| Msa0268940 | Msa1354820 | 0.813836 | 2.091999e-51 | -8.615850e-47 |
| Msa0268950 | Msa1354820 | 0.817027 | 4.080888e-52 | -8.615850e-47 |
| Msa0268960 | Msa1354820 | 0.838699 | 2.462619e-57 | -8.615850e-47 |
| Msa0269040 | Msa1354820 | 0.823004 | 1.749164e-53 | -8.615850e-47 |
| Msa0269050 | Msa1354820 | 0.821829 | 3.278117e-53 | -8.615850e-47 |
| Msa0269070 | Msa1354820 | 0.808277 | 3.352344e-50 | -8.615850e-47 |
| Msa0269090 | Msa1354820 | 0.833690 | 4.614008e-56 | -8.615850e-47 |
| Msa0269130 | Msa1354820 | 0.880987 | 3.488477e-70 | -8.615850e-47 |
| Msa0269140 | Msa1354820 | 0.855486 | 6.110701e-62 | -8.615850e-47 |
| Msa0269150 | Msa1354820 | 0.851334 | 9.498428e-61 | -8.615850e-47 |
| Msa0344180 | Msa1354820 | 0.824032 | 1.005326e-53 | -8.615850e-47 |
| Msa0344190 | Msa1354820 | 0.816274 | 6.018800e-52 | -8.615850e-47 |
| Msa0344260 | Msa1354820 | 0.813949 | 1.975658e-51 | -8.615850e-47 |
| Msa0344300 | Msa1354820 | 0.816228 | 6.163209e-52 | -8.615850e-47 |
| Msa0344310 | Msa1354820 | 0.818742 | 1.672573e-52 | -8.615850e-47 |
| Msa1126790 | Msa1354820 | 0.803227 | 3.854632e-49 | -8.615850e-47 |
| Msa1126810 | Msa1354820 | 0.802778 | 4.773258e-49 | -8.615850e-47 |
| Msa1143120 | Msa1354820 | 0.821002 | 5.089677e-53 | -8.615850e-47 |
| Msa1143130 | Msa1354820 | 0.802497 | 5.456294e-49 | -8.615850e-47 |
| Msa1143160 | Msa1354820 | 0.802019 | 6.843063e-49 | -8.615850e-47 |
| Msa1143170 | Msa1354820 | 0.836339 | 9.914389e-57 | -8.615850e-47 |
| Msa0484040 | Msa1354820 | 0.800532 | 1.379291e-48 | -8.615850e-47 |
| Msa0581090 | Msa1354820 | 0.817005 | 4.127537e-52 | -8.615850e-47 |
| Msa0582510 | Msa1354820 | 0.829999 | 3.759938e-55 | -8.615850e-47 |
| Msa0582520 | Msa1354820 | 0.813621 | 2.332582e-51 | -8.615850e-47 |
| Msa0582560 | Msa1354820 | 0.813752 | 2.183391e-51 | -8.615850e-47 |
| Msa0582590 | Msa1354820 | 0.808641 | 2.802346e-50 | -8.615850e-47 |
| Msa0582610 | Msa1354820 | 0.808250 | 3.397389e-50 | -8.615850e-47 |
| Msa0582630 | Msa1354820 | 0.823712 | 1.195294e-53 | -8.615850e-47 |
| Msa0582640 | Msa1354820 | 0.817889 | 2.608482e-52 | -8.615850e-47 |
| Msa0582650 | Msa1354820 | 0.824503 | 7.793870e-54 | -8.615850e-47 |
| Msa0582690 | Msa1354820 | 0.830894 | 2.270688e-55 | -8.615850e-47 |
| Msa0582700 | Msa1354820 | 0.816293 | 5.959368e-52 | -8.615850e-47 |
| Msa0582730 | Msa1354820 | 0.802669 | 5.026797e-49 | -8.615850e-47 |
| Msa0582750 | Msa1354820 | 0.833544 | 5.016809e-56 | -8.615850e-47 |
| Msa0582760 | Msa1354820 | 0.821804 | 3.323340e-53 | -8.615850e-47 |
| Msa0582770 | Msa1354820 | 0.832842 | 7.504814e-56 | -8.615850e-47 |
| Msa0582780 | Msa1354820 | 0.810536 | 1.098073e-50 | -8.615850e-47 |
| Msa0582810 | Msa1354820 | 0.831156 | 1.957714e-55 | -8.615850e-47 |
| Msa0582820 | Msa1354820 | 0.826517 | 2.597239e-54 | -8.615850e-47 |
| Msa0582860 | Msa1354820 | 0.812246 | 4.668766e-51 | -8.615850e-47 |
| Msa0582910 | Msa1354820 | 0.817065 | 4.000259e-52 | -8.615850e-47 |
| Msa0582920 | Msa1354820 | 0.832709 | 8.097496e-56 | -8.615850e-47 |
| Msa0591270 | Msa1354820 | 0.801249 | 9.840835e-49 | -8.615850e-47 |
| Msa0591290 | Msa1354820 | 0.829617 | 4.657562e-55 | -8.615850e-47 |
| Msa0591310 | Msa1354820 | 0.895530 | 8.780399e-76 | -8.615850e-47 |
| Msa0591350 | Msa1354820 | 0.869555 | 2.836002e-66 | -8.615850e-47 |
| Msa0591360 | Msa1354820 | 0.864736 | 9.812337e-65 | -8.615850e-47 |
| Msa0591380 | Msa1354820 | 0.814464 | 1.520528e-51 | -8.615850e-47 |
| Msa0867680 | Msa1354820 | 0.857573 | 1.489214e-62 | -8.615850e-47 |
| Msa0867690 | Msa1354820 | 0.893123 | 8.424857e-75 | -8.615850e-47 |
| Msa0876520 | Msa1354820 | 0.818798 | 1.624020e-52 | -8.615850e-47 |
| Msa0908220 | Msa1354820 | 0.905231 | 5.341068e-80 | -8.615850e-47 |
| Msa0908230 | Msa1354820 | 0.874601 | 5.944720e-68 | -8.615850e-47 |
| Msa0908240 | Msa1354820 | 0.835929 | 1.259965e-56 | -8.615850e-47 |
| Msa0908310 | Msa1354820 | 0.868694 | 5.398603e-66 | -8.615850e-47 |
| Msa0908320 | Msa1354820 | 0.916654 | 1.373271e-85 | -8.615850e-47 |
| Msa0908370 | Msa1354820 | 0.867078 | 1.783807e-65 | -8.615850e-47 |
| Msa0908380 | Msa1354820 | 0.873394 | 1.521533e-67 | -8.615850e-47 |
| Msa0908430 | Msa1354820 | 0.896263 | 4.361408e-76 | -8.615850e-47 |
| Msa0908440 | Msa1354820 | 0.867862 | 1.000433e-65 | -8.615850e-47 |
| Msa0908450 | Msa1354820 | 0.862651 | 4.357358e-64 | -8.615850e-47 |
| Msa0908480 | Msa1354820 | 0.817367 | 3.420398e-52 | -8.615850e-47 |
| Msa0908530 | Msa1354820 | 0.888520 | 5.489331e-73 | -8.615850e-47 |
| Msa0908540 | Msa1354820 | 0.918411 | 1.611217e-86 | -8.615850e-47 |
| Msa0908590 | Msa1354820 | 0.889490 | 2.311333e-73 | -8.615850e-47 |
| Msa0908600 | Msa1354820 | 0.853718 | 1.985874e-61 | -8.615850e-47 |
| Msa0908610 | Msa1354820 | 0.827731 | 1.330831e-54 | -8.615850e-47 |
| Msa0908650 | Msa1354820 | 0.891273 | 4.618695e-74 | -8.615850e-47 |
| Msa0908660 | Msa1354820 | 0.857081 | 2.081480e-62 | -8.615850e-47 |
| Msa0908670 | Msa1354820 | 0.855154 | 7.630969e-62 | -8.615850e-47 |
| Msa0908720 | Msa1354820 | 0.873935 | 9.999930e-68 | -8.615850e-47 |
| Msa0908730 | Msa1354820 | 0.921298 | 4.282411e-88 | -8.615850e-47 |
| Msa0911190 | Msa1354820 | 0.826683 | 2.370893e-54 | -8.615850e-47 |
| Msa0911200 | Msa1354820 | 0.843140 | 1.683020e-58 | -8.615850e-47 |
| Msa0924830 | Msa1354820 | 0.853155 | 2.879701e-61 | -8.615850e-47 |
| Msa0924850 | Msa1354820 | 0.802294 | 6.007954e-49 | -8.615850e-47 |
| Msa0924870 | Msa1354820 | 0.809917 | 1.492903e-50 | -8.615850e-47 |
| Msa0924880 | Msa1354820 | 0.823950 | 1.050916e-53 | -8.615850e-47 |
| Msa0924930 | Msa1354820 | 0.840107 | 1.061212e-57 | -8.615850e-47 |
| Msa0924940 | Msa1354820 | 0.898513 | 4.931968e-77 | -8.615850e-47 |
| Msa0925040 | Msa1354820 | 0.816190 | 6.282595e-52 | -8.615850e-47 |
| Msa0925100 | Msa1354820 | 0.851634 | 7.812810e-61 | -8.615850e-47 |
| Msa0925110 | Msa1354820 | 0.899038 | 2.941638e-77 | -8.615850e-47 |
| Msa0931070 | Msa1354820 | 0.809866 | 1.530949e-50 | -8.615850e-47 |
| Msa0931080 | Msa1354820 | 0.810414 | 1.166737e-50 | -8.615850e-47 |
| Msa0931130 | Msa1354820 | 0.823555 | 1.300432e-53 | -8.615850e-47 |
| Msa0931140 | Msa1354820 | 0.801904 | 7.225031e-49 | -8.615850e-47 |
| Msa0931210 | Msa1354820 | 0.812383 | 4.358212e-51 | -8.615850e-47 |
| Msa0931220 | Msa1354820 | 0.804608 | 1.990831e-49 | -8.615850e-47 |
| Msa0931230 | Msa1354820 | 0.847065 | 1.463405e-59 | -8.615850e-47 |
| Msa0931260 | Msa1354820 | 0.836443 | 9.329478e-57 | -8.615850e-47 |
| Msa0931270 | Msa1354820 | 0.808649 | 2.792162e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354820 | MtrunA17_CPg0492451 | 99.020 | 204 | 2 | 0 | 191 | 394 | 1 | 204 | 1.20e-144 | 409 |
| Msa1354820 | MtrunA17_Chr4g0016071 | 99.020 | 204 | 2 | 0 | 191 | 394 | 1 | 204 | 1.20e-144 | 409 |
| Msa1354820 | MtrunA17_Chr3g0090871 | 91.667 | 204 | 2 | 1 | 191 | 394 | 1 | 189 | 6.59e-127 | 363 |
| Msa1354820 | MtrunA17_Chr1g0195541 | 99.242 | 132 | 1 | 0 | 1 | 132 | 1 | 132 | 2.52e-88 | 264 |
| Msa1354820 | MtrunA17_CPg0492431 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 8.52e-87 | 265 |
| Msa1354820 | MtrunA17_Chr3g0090851 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 8.52e-87 | 265 |
| Msa1354820 | MtrunA17_Chr4g0016091 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 8.52e-87 | 265 |
| Msa1354820 | MtrunA17_Chr1g0153231 | 97.297 | 74 | 2 | 0 | 58 | 131 | 1 | 74 | 7.16e-44 | 147 |
| Msa1354820 | MtrunA17_Chr0c03g0489881 | 33.028 | 218 | 135 | 4 | 129 | 346 | 2 | 208 | 4.83e-27 | 107 |
| Msa1354820 | MtrunA17_MTg0491931 | 33.028 | 218 | 135 | 4 | 129 | 346 | 2 | 208 | 4.83e-27 | 107 |
| Msa1354820 | MtrunA17_CPg0492181 | 24.865 | 370 | 251 | 10 | 6 | 366 | 147 | 498 | 5.93e-18 | 85.9 |
| Msa1354820 | MtrunA17_Chr4g0000831 | 25.210 | 238 | 160 | 7 | 6 | 239 | 32 | 255 | 1.09e-13 | 71.2 |
| Msa1354820 | MtrunA17_Chr6g0466221 | 24.324 | 370 | 233 | 11 | 6 | 366 | 147 | 478 | 4.55e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354820 | ATCG00890.1 | 93.655 | 394 | 18 | 1 | 1 | 394 | 1 | 387 | 0.0 | 666 |
| Msa1354820 | ATCG01250.1 | 93.655 | 394 | 18 | 1 | 1 | 394 | 1 | 387 | 0.0 | 666 |
| Msa1354820 | AT2G07689.1 | 35.859 | 198 | 116 | 4 | 129 | 326 | 2 | 188 | 7.76e-27 | 107 |
| Msa1354820 | ATCG01010.1 | 26.490 | 302 | 199 | 8 | 9 | 301 | 130 | 417 | 4.55e-16 | 80.5 |
Find 85 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGATATGTAATTAT+TGG | 0.189063 | tig0014543:+541113 | Msa1354820:CDS |
| CATGGTTTCTCTTGGCTATA+TGG | 0.197078 | tig0014543:+540020 | Msa1354820:CDS |
| TGGGGCAAGCTCTTCTATTC+TGG | 0.197255 | tig0014543:+539995 | Msa1354820:CDS |
| GCTATTCTTAGCATGCTATT+AGG | 0.213688 | tig0014543:+541029 | Msa1354820:CDS |
| TTTGCTTGCATTGTGTTATT+TGG | 0.223841 | tig0014543:+541218 | Msa1354820:CDS |
| TCGGAAAACTTCATTTATTC+TGG | 0.226485 | tig0014543:+541366 | Msa1354820:CDS |
| ATGGAATTGTTTGATCTTAC+AGG | 0.227109 | tig0014543:-541539 | None:intergenic |
| GCACGTGAGGAGTTATTTCT+TGG | 0.274625 | tig0014543:-541499 | None:intergenic |
| ATTAGACCGTACATCTTTCT+TGG | 0.278852 | tig0014543:-539943 | None:intergenic |
| TCCTGAGCAATTTCAATAAT+GGG | 0.279137 | tig0014543:-541620 | None:intergenic |
| ATATTCATCACTGTAGGAAT+TGG | 0.280413 | tig0014543:+540134 | Msa1354820:CDS |
| TCGTTTGATGAGAAATAAAA+AGG | 0.282633 | tig0014543:-540981 | None:intergenic |
| AGCTCTTCTATTCTGGTTCA+TGG | 0.287942 | tig0014543:+540002 | Msa1354820:CDS |
| ATCCTGAGCAATTTCAATAA+TGG | 0.298192 | tig0014543:-541621 | None:intergenic |
| CTATTCTTAGCATGCTATTA+GGG | 0.301257 | tig0014543:+541030 | Msa1354820:CDS |
| TATTCGTCCATAGGTCAAAT+TGG | 0.303171 | tig0014543:+541098 | Msa1354820:CDS |
| GCAAGCAGGCCTATATTTCT+TGG | 0.316441 | tig0014543:+541397 | Msa1354820:CDS |
| GCATACGTTTCATGCTTGTT+TGG | 0.326865 | tig0014543:-541070 | None:intergenic |
| TTCTGGTTCATGGTTTCTCT+TGG | 0.336946 | tig0014543:+540012 | Msa1354820:CDS |
| TTATGCTCCTATCTACTATC+TGG | 0.367530 | tig0014543:+539915 | Msa1354820:CDS |
| CATACGTTTCATGCTTGTTT+GGG | 0.369828 | tig0014543:-541069 | None:intergenic |
| GTAATTATTGGAATAATTGT+TGG | 0.373428 | tig0014543:+541125 | Msa1354820:CDS |
| CTATATTTCTTGGTTTCAAT+AGG | 0.375317 | tig0014543:+541407 | Msa1354820:CDS |
| ATGGGGTTCATTGATATTCC+TGG | 0.380234 | tig0014543:-541602 | None:intergenic |
| CCCTAGCCCCTTCTCATCAA+TGG | 0.393307 | tig0014543:+540168 | Msa1354820:CDS |
| GTGTTATTTGGTCTACGTAC+TGG | 0.413420 | tig0014543:+541230 | Msa1354820:CDS |
| TATTCATCACTGTAGGAATT+GGG | 0.417349 | tig0014543:+540135 | Msa1354820:CDS |
| TCTTGGCTATATGGTTCGTC+CGG | 0.418558 | tig0014543:+540029 | Msa1354820:CDS |
| TACATATCCAATTTGACCTA+TGG | 0.420081 | tig0014543:-541105 | None:intergenic |
| TTCTGGTGTGGATGGCAAGC+AGG | 0.432708 | tig0014543:+541383 | Msa1354820:CDS |
| CTATTGAAACCAAGAAATAT+AGG | 0.436794 | tig0014543:-541406 | None:intergenic |
| GCCCTATGTCTATTATCCTT+AGG | 0.440840 | tig0014543:+541317 | Msa1354820:CDS |
| GGAGGTCTTCCTCCACTAGC+AGG | 0.443104 | tig0014543:+541338 | Msa1354820:CDS |
| AGCAAAAGTTCCTAGATTCA+TGG | 0.448640 | tig0014543:-541201 | None:intergenic |
| CCCCATTATTGAAATTGCTC+AGG | 0.459148 | tig0014543:+541619 | Msa1354820:CDS |
| TTCTATATCTCCATGAATCT+AGG | 0.460861 | tig0014543:+541191 | Msa1354820:CDS |
| CTTGGCTATATGGTTCGTCC+GGG | 0.468938 | tig0014543:+540030 | Msa1354820:CDS |
| TTCATTTATTCTGGTGTGGA+TGG | 0.469314 | tig0014543:+541375 | Msa1354820:CDS |
| TACTATGAAATATTTACTCA+TGG | 0.474204 | tig0014543:+539971 | Msa1354820:CDS |
| ATAATTAAGTTATTAATGAC+TGG | 0.481516 | tig0014543:+541470 | Msa1354820:CDS |
| GGTATATCCAGATAGTAGAT+AGG | 0.488329 | tig0014543:-539922 | None:intergenic |
| ATAAGCGCAATTGAAATTCC+AGG | 0.496050 | tig0014543:-540113 | None:intergenic |
| CTCACGTGCGAAATTATAGA+AGG | 0.502645 | tig0014543:+541513 | Msa1354820:CDS |
| TGAAATATTTACTCATGGGT+GGG | 0.506663 | tig0014543:+539976 | Msa1354820:CDS |
| TCCATTGATGAGAAGGGGCT+AGG | 0.510524 | tig0014543:-540169 | None:intergenic |
| ATGCTTGCTTATTCGTCCAT+AGG | 0.517225 | tig0014543:+541089 | Msa1354820:CDS |
| TTGAAGCTCTATCTCTCCCC+CGG | 0.517737 | tig0014543:-540048 | None:intergenic |
| AAACTTCATTTATTCTGGTG+TGG | 0.518432 | tig0014543:+541371 | Msa1354820:CDS |
| TTTATTTCTCATCAAACGAA+TGG | 0.522523 | tig0014543:+540985 | Msa1354820:CDS |
| ACACAAATGTATAACTCCCC+TGG | 0.530663 | tig0014543:+540095 | Msa1354820:CDS |
| GATAACATTCGAGATTATGC+AGG | 0.531827 | tig0014543:+541257 | Msa1354820:CDS |
| ATGAAATATTTACTCATGGG+TGG | 0.533610 | tig0014543:+539975 | Msa1354820:CDS |
| GAAATATTTACTCATGGGTG+GGG | 0.537789 | tig0014543:+539977 | Msa1354820:CDS |
| TATAATCATACTCAATTCGA+TGG | 0.542526 | tig0014543:-541558 | None:intergenic |
| CAGGAGTCCATTGATGAGAA+GGG | 0.542754 | tig0014543:-540175 | None:intergenic |
| GAGCTTCAAGAAATAGTGAA+TGG | 0.546870 | tig0014543:+540062 | Msa1354820:CDS |
| ATAATTGTTGGAGACTCAAA+TGG | 0.548093 | tig0014543:+541137 | Msa1354820:CDS |
| TCAGGAGTCCATTGATGAGA+AGG | 0.551074 | tig0014543:-540176 | None:intergenic |
| AGAAAAGCAACGACTGGAGT+CGG | 0.551106 | tig0014543:-540903 | None:intergenic |
| CCATTGATGAGAAGGGGCTA+GGG | 0.552174 | tig0014543:-540168 | None:intergenic |
| TTCATATTAACCGCTACTCT+AGG | 0.552712 | tig0014543:+539828 | Msa1354820:CDS |
| TCCTAAGGATAATAGACATA+GGG | 0.556597 | tig0014543:-541318 | None:intergenic |
| CTCCTAAGGATAATAGACAT+AGG | 0.558738 | tig0014543:-541319 | None:intergenic |
| GAAAGATGTACGGTCTAATG+AGG | 0.565206 | tig0014543:+539947 | Msa1354820:CDS |
| TAAGCGCAATTGAAATTCCA+GGG | 0.565360 | tig0014543:-540112 | None:intergenic |
| CTTCTATAATTTCGCACGTG+AGG | 0.565900 | tig0014543:-541512 | None:intergenic |
| GGAGAGTCAGAGTCGAAAAG+AGG | 0.572366 | tig0014543:-540882 | None:intergenic |
| TGGCTATATGGTTCGTCCGG+GGG | 0.574450 | tig0014543:+540032 | Msa1354820:CDS |
| ATAGCATGCTAAGAATAGCT+AGG | 0.576533 | tig0014543:-541025 | None:intergenic |
| TAGTGGAGGAAGACCTCCTA+AGG | 0.577052 | tig0014543:-541333 | None:intergenic |
| ACAGAAAGAAAAGCAACGAC+TGG | 0.577795 | tig0014543:-540909 | None:intergenic |
| TTGGCTATATGGTTCGTCCG+GGG | 0.582473 | tig0014543:+540031 | Msa1354820:CDS |
| ACTATGAAATATTTACTCAT+GGG | 0.584827 | tig0014543:+539972 | Msa1354820:CDS |
| CTATGTCTATTATCCTTAGG+AGG | 0.590927 | tig0014543:+541320 | Msa1354820:CDS |
| GCGCTTATATTCATCACTGT+AGG | 0.594447 | tig0014543:+540128 | Msa1354820:CDS |
| TTGAATGAGAGAAAGAAGTG+AGG | 0.599130 | tig0014543:+540856 | Msa1354820:intron |
| CCTGAGCAATTTCAATAATG+GGG | 0.604713 | tig0014543:-541619 | None:intergenic |
| ATATTAACCGCTACTCTAGG+AGG | 0.609728 | tig0014543:+539831 | Msa1354820:CDS |
| GTGATAGCATCTACTATACC+AGG | 0.610688 | tig0014543:+541584 | Msa1354820:CDS |
| GATATACCAAGAAAGATGTA+CGG | 0.625842 | tig0014543:+539937 | Msa1354820:CDS |
| ATTGTTGGAGACTCAAATGG+TGG | 0.626325 | tig0014543:+541140 | Msa1354820:CDS |
| AGGAGTCCATTGATGAGAAG+GGG | 0.632944 | tig0014543:-540174 | None:intergenic |
| AGGAATATCGAAAATTCGAG+TGG | 0.650147 | tig0014543:-540961 | None:intergenic |
| AAACATTCCTCCTAGAGTAG+CGG | 0.663526 | tig0014543:-539838 | None:intergenic |
| AAGCGCAATTGAAATTCCAG+GGG | 0.720091 | tig0014543:-540111 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | tig0014543:540332-540351 | Msa1354820:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | tig0014543:540645-540664 | Msa1354820:intron | 15.0% |
| !! | ATAATTAAGTTATTAATGAC+TGG | + | tig0014543:541470-541489 | Msa1354820:CDS | 15.0% |
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | tig0014543:540332-540351 | Msa1354820:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | tig0014543:540645-540664 | Msa1354820:intron | 15.0% |
| !! | ATAATTAAGTTATTAATGAC+TGG | + | tig0014543:541470-541489 | Msa1354820:CDS | 15.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | tig0014543:539971-539990 | Msa1354820:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | tig0014543:539972-539991 | Msa1354820:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | tig0014543:540401-540420 | Msa1354820:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | tig0014543:540722-540741 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | tig0014543:540722-540741 | Msa1354820:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | tig0014543:541113-541132 | Msa1354820:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | tig0014543:541125-541144 | Msa1354820:CDS | 20.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | tig0014543:539971-539990 | Msa1354820:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | tig0014543:539972-539991 | Msa1354820:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | tig0014543:540401-540420 | Msa1354820:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | tig0014543:540722-540741 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | tig0014543:540722-540741 | Msa1354820:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | tig0014543:541113-541132 | Msa1354820:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | tig0014543:541125-541144 | Msa1354820:CDS | 20.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | tig0014543:540261-540280 | Msa1354820:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | tig0014543:540320-540339 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | tig0014543:540402-540421 | Msa1354820:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | tig0014543:540433-540452 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | tig0014543:540461-540480 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | tig0014543:540728-540747 | Msa1354820:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | - | tig0014543:540797-540816 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | + | tig0014543:540801-540820 | Msa1354820:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | tig0014543:540984-541003 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | tig0014543:540985-541004 | Msa1354820:CDS | 25.0% |
| !!! | ATACACAAAAGATCCTTTTT+TGG | + | tig0014543:541283-541302 | Msa1354820:CDS | 25.0% |
| ! | CTATTGAAACCAAGAAATAT+AGG | - | tig0014543:541409-541428 | None:intergenic | 25.0% |
| ! | CTATATTTCTTGGTTTCAAT+AGG | + | tig0014543:541407-541426 | Msa1354820:CDS | 25.0% |
| ! | TATAATCATACTCAATTCGA+TGG | - | tig0014543:541561-541580 | None:intergenic | 25.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | tig0014543:540261-540280 | Msa1354820:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | tig0014543:540320-540339 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | tig0014543:540402-540421 | Msa1354820:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | tig0014543:540433-540452 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | tig0014543:540461-540480 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | tig0014543:540728-540747 | Msa1354820:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | - | tig0014543:540797-540816 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | + | tig0014543:540801-540820 | Msa1354820:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | tig0014543:540984-541003 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | tig0014543:540985-541004 | Msa1354820:CDS | 25.0% |
| !!! | ATACACAAAAGATCCTTTTT+TGG | + | tig0014543:541283-541302 | Msa1354820:CDS | 25.0% |
| ! | CTATTGAAACCAAGAAATAT+AGG | - | tig0014543:541409-541428 | None:intergenic | 25.0% |
| ! | CTATATTTCTTGGTTTCAAT+AGG | + | tig0014543:541407-541426 | Msa1354820:CDS | 25.0% |
| ! | TATAATCATACTCAATTCGA+TGG | - | tig0014543:541561-541580 | None:intergenic | 25.0% |
| GATATACCAAGAAAGATGTA+CGG | + | tig0014543:539937-539956 | Msa1354820:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | tig0014543:539975-539994 | Msa1354820:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | tig0014543:539976-539995 | Msa1354820:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | tig0014543:540134-540153 | Msa1354820:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | tig0014543:540135-540154 | Msa1354820:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | tig0014543:540242-540261 | Msa1354820:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | tig0014543:540507-540526 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | tig0014543:540507-540526 | Msa1354820:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | tig0014543:540607-540626 | Msa1354820:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | tig0014543:541030-541049 | Msa1354820:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | tig0014543:541108-541127 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | tig0014543:541137-541156 | Msa1354820:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | tig0014543:541191-541210 | Msa1354820:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | tig0014543:541218-541237 | Msa1354820:CDS | 30.0% |
| TCCTAAGGATAATAGACATA+GGG | - | tig0014543:541321-541340 | None:intergenic | 30.0% | |
| TCGGAAAACTTCATTTATTC+TGG | + | tig0014543:541366-541385 | Msa1354820:CDS | 30.0% | |
| AAACTTCATTTATTCTGGTG+TGG | + | tig0014543:541371-541390 | Msa1354820:CDS | 30.0% | |
| ATGGAATTGTTTGATCTTAC+AGG | - | tig0014543:541542-541561 | None:intergenic | 30.0% | |
| TCCTGAGCAATTTCAATAAT+GGG | - | tig0014543:541623-541642 | None:intergenic | 30.0% | |
| ATCCTGAGCAATTTCAATAA+TGG | - | tig0014543:541624-541643 | None:intergenic | 30.0% | |
| GATATACCAAGAAAGATGTA+CGG | + | tig0014543:539937-539956 | Msa1354820:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | tig0014543:539975-539994 | Msa1354820:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | tig0014543:539976-539995 | Msa1354820:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | tig0014543:540134-540153 | Msa1354820:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | tig0014543:540135-540154 | Msa1354820:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | tig0014543:540242-540261 | Msa1354820:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | tig0014543:540507-540526 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | tig0014543:540507-540526 | Msa1354820:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | tig0014543:540607-540626 | Msa1354820:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | tig0014543:541030-541049 | Msa1354820:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | tig0014543:541108-541127 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | tig0014543:541137-541156 | Msa1354820:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | tig0014543:541191-541210 | Msa1354820:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | tig0014543:541218-541237 | Msa1354820:CDS | 30.0% |
| TCCTAAGGATAATAGACATA+GGG | - | tig0014543:541321-541340 | None:intergenic | 30.0% | |
| TCGGAAAACTTCATTTATTC+TGG | + | tig0014543:541366-541385 | Msa1354820:CDS | 30.0% | |
| AAACTTCATTTATTCTGGTG+TGG | + | tig0014543:541371-541390 | Msa1354820:CDS | 30.0% | |
| ATGGAATTGTTTGATCTTAC+AGG | - | tig0014543:541542-541561 | None:intergenic | 30.0% | |
| TCCTGAGCAATTTCAATAAT+GGG | - | tig0014543:541623-541642 | None:intergenic | 30.0% | |
| ATCCTGAGCAATTTCAATAA+TGG | - | tig0014543:541624-541643 | None:intergenic | 30.0% | |
| TTCATATTAACCGCTACTCT+AGG | + | tig0014543:539828-539847 | Msa1354820:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | tig0014543:539915-539934 | Msa1354820:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | tig0014543:539925-539944 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | tig0014543:539946-539965 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | tig0014543:539977-539996 | Msa1354820:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | tig0014543:540062-540081 | Msa1354820:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | tig0014543:540115-540134 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | tig0014543:540116-540135 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | tig0014543:540236-540255 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | tig0014543:540240-540259 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | tig0014543:540374-540393 | Msa1354820:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | tig0014543:540384-540403 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | tig0014543:540409-540428 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | tig0014543:540474-540493 | Msa1354820:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | tig0014543:540579-540598 | Msa1354820:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | tig0014543:540615-540634 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | tig0014543:540616-540635 | Msa1354820:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | tig0014543:540635-540654 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | tig0014543:540856-540875 | Msa1354820:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | tig0014543:540964-540983 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | tig0014543:541028-541047 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | tig0014543:541029-541048 | Msa1354820:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | tig0014543:541072-541091 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | tig0014543:541098-541117 | Msa1354820:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | tig0014543:541204-541223 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | tig0014543:541257-541276 | Msa1354820:CDS | 35.0% | |
| CTCCTAAGGATAATAGACAT+AGG | - | tig0014543:541322-541341 | None:intergenic | 35.0% | |
| CTATGTCTATTATCCTTAGG+AGG | + | tig0014543:541320-541339 | Msa1354820:CDS | 35.0% | |
| TTCATTTATTCTGGTGTGGA+TGG | + | tig0014543:541375-541394 | Msa1354820:CDS | 35.0% | |
| CCTGAGCAATTTCAATAATG+GGG | - | tig0014543:541622-541641 | None:intergenic | 35.0% | |
| TTCATATTAACCGCTACTCT+AGG | + | tig0014543:539828-539847 | Msa1354820:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | tig0014543:539915-539934 | Msa1354820:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | tig0014543:539925-539944 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | tig0014543:539946-539965 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | tig0014543:539977-539996 | Msa1354820:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | tig0014543:540062-540081 | Msa1354820:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | tig0014543:540115-540134 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | tig0014543:540116-540135 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | tig0014543:540236-540255 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | tig0014543:540240-540259 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | tig0014543:540374-540393 | Msa1354820:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | tig0014543:540384-540403 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | tig0014543:540409-540428 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | tig0014543:540474-540493 | Msa1354820:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | tig0014543:540579-540598 | Msa1354820:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | tig0014543:540615-540634 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | tig0014543:540616-540635 | Msa1354820:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | tig0014543:540635-540654 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | tig0014543:540856-540875 | Msa1354820:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | tig0014543:540964-540983 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | tig0014543:541028-541047 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | tig0014543:541029-541048 | Msa1354820:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | tig0014543:541072-541091 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | tig0014543:541098-541117 | Msa1354820:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | tig0014543:541204-541223 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | tig0014543:541257-541276 | Msa1354820:CDS | 35.0% | |
| CTCCTAAGGATAATAGACAT+AGG | - | tig0014543:541322-541341 | None:intergenic | 35.0% | |
| CTATGTCTATTATCCTTAGG+AGG | + | tig0014543:541320-541339 | Msa1354820:CDS | 35.0% | |
| TTCATTTATTCTGGTGTGGA+TGG | + | tig0014543:541375-541394 | Msa1354820:CDS | 35.0% | |
| CCTGAGCAATTTCAATAATG+GGG | - | tig0014543:541622-541641 | None:intergenic | 35.0% | |
| ATATTAACCGCTACTCTAGG+AGG | + | tig0014543:539831-539850 | Msa1354820:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | tig0014543:539841-539860 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | tig0014543:539947-539966 | Msa1354820:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | tig0014543:540002-540021 | Msa1354820:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | tig0014543:540012-540031 | Msa1354820:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | tig0014543:540020-540039 | Msa1354820:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | tig0014543:540095-540114 | Msa1354820:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | tig0014543:540114-540133 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | tig0014543:540128-540147 | Msa1354820:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | tig0014543:540347-540366 | Msa1354820:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | tig0014543:540375-540394 | Msa1354820:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | tig0014543:540383-540402 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | tig0014543:540538-540557 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | tig0014543:540556-540575 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | tig0014543:540557-540576 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | tig0014543:540668-540687 | Msa1354820:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | tig0014543:540687-540706 | Msa1354820:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | tig0014543:540693-540712 | Msa1354820:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | tig0014543:540697-540716 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | tig0014543:540912-540931 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | tig0014543:541073-541092 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | tig0014543:541089-541108 | Msa1354820:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | tig0014543:541140-541159 | Msa1354820:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | tig0014543:541230-541249 | Msa1354820:CDS | 40.0% |
| GCTAAAGAGAGAGCCAAAAA+AGG | - | tig0014543:541299-541318 | None:intergenic | 40.0% | |
| GCCCTATGTCTATTATCCTT+AGG | + | tig0014543:541317-541336 | Msa1354820:CDS | 40.0% | |
| TTTCCGAAAAAACCTGCTAG+TGG | - | tig0014543:541353-541372 | None:intergenic | 40.0% | |
| CTTCTATAATTTCGCACGTG+AGG | - | tig0014543:541515-541534 | None:intergenic | 40.0% | |
| CTCACGTGCGAAATTATAGA+AGG | + | tig0014543:541513-541532 | Msa1354820:CDS | 40.0% | |
| GTGATAGCATCTACTATACC+AGG | + | tig0014543:541584-541603 | Msa1354820:CDS | 40.0% | |
| ATGGGGTTCATTGATATTCC+TGG | - | tig0014543:541605-541624 | None:intergenic | 40.0% | |
| CCCCATTATTGAAATTGCTC+AGG | + | tig0014543:541619-541638 | Msa1354820:CDS | 40.0% | |
| ATATTAACCGCTACTCTAGG+AGG | + | tig0014543:539831-539850 | Msa1354820:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | tig0014543:539841-539860 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | tig0014543:539947-539966 | Msa1354820:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | tig0014543:540002-540021 | Msa1354820:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | tig0014543:540012-540031 | Msa1354820:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | tig0014543:540020-540039 | Msa1354820:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | tig0014543:540095-540114 | Msa1354820:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | tig0014543:540114-540133 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | tig0014543:540128-540147 | Msa1354820:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | tig0014543:540347-540366 | Msa1354820:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | tig0014543:540375-540394 | Msa1354820:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | tig0014543:540383-540402 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | tig0014543:540538-540557 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | tig0014543:540556-540575 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | tig0014543:540557-540576 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | tig0014543:540668-540687 | Msa1354820:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | tig0014543:540687-540706 | Msa1354820:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | tig0014543:540693-540712 | Msa1354820:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | tig0014543:540697-540716 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | tig0014543:540912-540931 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | tig0014543:541073-541092 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | tig0014543:541089-541108 | Msa1354820:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | tig0014543:541140-541159 | Msa1354820:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | tig0014543:541230-541249 | Msa1354820:CDS | 40.0% |
| GCTAAAGAGAGAGCCAAAAA+AGG | - | tig0014543:541299-541318 | None:intergenic | 40.0% | |
| GCCCTATGTCTATTATCCTT+AGG | + | tig0014543:541317-541336 | Msa1354820:CDS | 40.0% | |
| TTTCCGAAAAAACCTGCTAG+TGG | - | tig0014543:541353-541372 | None:intergenic | 40.0% | |
| CTTCTATAATTTCGCACGTG+AGG | - | tig0014543:541515-541534 | None:intergenic | 40.0% | |
| CTCACGTGCGAAATTATAGA+AGG | + | tig0014543:541513-541532 | Msa1354820:CDS | 40.0% | |
| GTGATAGCATCTACTATACC+AGG | + | tig0014543:541584-541603 | Msa1354820:CDS | 40.0% | |
| ATGGGGTTCATTGATATTCC+TGG | - | tig0014543:541605-541624 | None:intergenic | 40.0% | |
| CCCCATTATTGAAATTGCTC+AGG | + | tig0014543:541619-541638 | Msa1354820:CDS | 40.0% | |
| TCTTGGCTATATGGTTCGTC+CGG | + | tig0014543:540029-540048 | Msa1354820:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | tig0014543:540177-540196 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | tig0014543:540178-540197 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | tig0014543:540179-540198 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | tig0014543:540188-540207 | Msa1354820:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | tig0014543:540195-540214 | Msa1354820:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | tig0014543:540293-540312 | Msa1354820:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | tig0014543:540310-540329 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | tig0014543:540311-540330 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | tig0014543:540362-540381 | Msa1354820:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | tig0014543:540526-540545 | Msa1354820:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | tig0014543:540681-540700 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | tig0014543:540746-540765 | Msa1354820:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | tig0014543:540750-540769 | Msa1354820:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | tig0014543:540829-540848 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | tig0014543:540831-540850 | Msa1354820:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | tig0014543:540906-540925 | None:intergenic | 45.0% | |
| !!! | CCTCCACTAGCAGGTTTTTT+CGG | + | tig0014543:541347-541366 | Msa1354820:CDS | 45.0% |
| GCAAGCAGGCCTATATTTCT+TGG | + | tig0014543:541397-541416 | Msa1354820:CDS | 45.0% | |
| !! | GCACGTGAGGAGTTATTTCT+TGG | - | tig0014543:541502-541521 | None:intergenic | 45.0% |
| TCTTGGCTATATGGTTCGTC+CGG | + | tig0014543:540029-540048 | Msa1354820:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | tig0014543:540177-540196 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | tig0014543:540178-540197 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | tig0014543:540179-540198 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | tig0014543:540188-540207 | Msa1354820:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | tig0014543:540195-540214 | Msa1354820:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | tig0014543:540293-540312 | Msa1354820:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | tig0014543:540310-540329 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | tig0014543:540311-540330 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | tig0014543:540362-540381 | Msa1354820:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | tig0014543:540526-540545 | Msa1354820:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | tig0014543:540681-540700 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | tig0014543:540746-540765 | Msa1354820:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | tig0014543:540750-540769 | Msa1354820:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | tig0014543:540829-540848 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | tig0014543:540831-540850 | Msa1354820:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | tig0014543:540906-540925 | None:intergenic | 45.0% | |
| !!! | CCTCCACTAGCAGGTTTTTT+CGG | + | tig0014543:541347-541366 | Msa1354820:CDS | 45.0% |
| GCAAGCAGGCCTATATTTCT+TGG | + | tig0014543:541397-541416 | Msa1354820:CDS | 45.0% | |
| !! | GCACGTGAGGAGTTATTTCT+TGG | - | tig0014543:541502-541521 | None:intergenic | 45.0% |
| TGGGGCAAGCTCTTCTATTC+TGG | + | tig0014543:539995-540014 | Msa1354820:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | tig0014543:540030-540049 | Msa1354820:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | tig0014543:540031-540050 | Msa1354820:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | - | tig0014543:540051-540070 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | tig0014543:540171-540190 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | tig0014543:540172-540191 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | tig0014543:540197-540216 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | tig0014543:540627-540646 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | tig0014543:540885-540904 | None:intergenic | 50.0% | |
| TAGTGGAGGAAGACCTCCTA+AGG | - | tig0014543:541336-541355 | None:intergenic | 50.0% | |
| CCGAAAAAACCTGCTAGTGG+AGG | - | tig0014543:541350-541369 | None:intergenic | 50.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | + | tig0014543:539995-540014 | Msa1354820:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | tig0014543:540030-540049 | Msa1354820:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | tig0014543:540031-540050 | Msa1354820:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | - | tig0014543:540051-540070 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | tig0014543:540171-540190 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | tig0014543:540172-540191 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | tig0014543:540197-540216 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | tig0014543:540627-540646 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | tig0014543:540885-540904 | None:intergenic | 50.0% | |
| TAGTGGAGGAAGACCTCCTA+AGG | - | tig0014543:541336-541355 | None:intergenic | 50.0% | |
| CCGAAAAAACCTGCTAGTGG+AGG | - | tig0014543:541350-541369 | None:intergenic | 50.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | + | tig0014543:540032-540051 | Msa1354820:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | tig0014543:540168-540187 | Msa1354820:CDS | 55.0% | |
| TTCTGGTGTGGATGGCAAGC+AGG | + | tig0014543:541383-541402 | Msa1354820:CDS | 55.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | + | tig0014543:540032-540051 | Msa1354820:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | tig0014543:540168-540187 | Msa1354820:CDS | 55.0% | |
| TTCTGGTGTGGATGGCAAGC+AGG | + | tig0014543:541383-541402 | Msa1354820:CDS | 55.0% | |
| GGAGGTCTTCCTCCACTAGC+AGG | + | tig0014543:541338-541357 | Msa1354820:CDS | 60.0% | |
| GGAGGTCTTCCTCCACTAGC+AGG | + | tig0014543:541338-541357 | Msa1354820:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0014543 | gene | 539804 | 541655 | 539804 | ID=Msa1354820;Name=Msa1354820 |
| tig0014543 | mRNA | 539804 | 541655 | 539804 | ID=Msa1354820-mRNA-1;Parent=Msa1354820;Name=Msa1354820-mRNA-1;_AED=0.80;_eAED=0.80;_QI=0|0|0|0.5|1|1|2|0|394 |
| tig0014543 | exon | 539804 | 540199 | 539804 | ID=Msa1354820-mRNA-1:exon:9217;Parent=Msa1354820-mRNA-1 |
| tig0014543 | exon | 540867 | 541655 | 540867 | ID=Msa1354820-mRNA-1:exon:9218;Parent=Msa1354820-mRNA-1 |
| tig0014543 | CDS | 539804 | 540199 | 539804 | ID=Msa1354820-mRNA-1:cds;Parent=Msa1354820-mRNA-1 |
| tig0014543 | CDS | 540867 | 541655 | 540867 | ID=Msa1354820-mRNA-1:cds;Parent=Msa1354820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
