Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365900 | XP_033515266.1 | 97.834 | 277 | 6 | 0 | 1 | 277 | 1 | 277 | 0.0 | 547 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365900 | sp|P0CC47|NU2C2_CITSI | 94.585 | 277 | 8 | 1 | 1 | 277 | 124 | 393 | 0.0 | 517 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365900 | A0A7D4X479 | 97.509 | 281 | 3 | 1 | 1 | 277 | 106 | 386 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095150 | Msa1365900 | 0.815767 | 7.809254e-52 | -8.615850e-47 |
| Msa0095230 | Msa1365900 | 0.817427 | 3.317212e-52 | -8.615850e-47 |
| Msa0095280 | Msa1365900 | 0.818453 | 1.945165e-52 | -8.615850e-47 |
| Msa1354320 | Msa1365900 | 0.813158 | 2.948173e-51 | -8.615850e-47 |
| Msa1354380 | Msa1365900 | 0.800971 | 1.121956e-48 | -8.615850e-47 |
| Msa1354420 | Msa1365900 | 0.833865 | 4.171967e-56 | -8.615850e-47 |
| Msa1354430 | Msa1365900 | 0.849517 | 3.073848e-60 | -8.615850e-47 |
| Msa1354480 | Msa1365900 | 0.842680 | 2.230689e-58 | -8.615850e-47 |
| Msa1354490 | Msa1365900 | 0.834601 | 2.727285e-56 | -8.615850e-47 |
| Msa1354500 | Msa1365900 | 0.840454 | 8.612003e-58 | -8.615850e-47 |
| Msa1354550 | Msa1365900 | 0.835027 | 2.130955e-56 | -8.615850e-47 |
| Msa1354560 | Msa1365900 | 0.863344 | 2.661807e-64 | -8.615850e-47 |
| Msa1354610 | Msa1365900 | 0.861554 | 9.455755e-64 | -8.615850e-47 |
| Msa1354620 | Msa1365900 | 0.835573 | 1.550743e-56 | -8.615850e-47 |
| Msa1354630 | Msa1365900 | 0.840653 | 7.639230e-58 | -8.615850e-47 |
| Msa1354680 | Msa1365900 | 0.817057 | 4.016395e-52 | -8.615850e-47 |
| Msa1354690 | Msa1365900 | 0.842733 | 2.158553e-58 | -8.615850e-47 |
| Msa1354700 | Msa1365900 | 0.873555 | 1.342686e-67 | -8.615850e-47 |
| Msa1354740 | Msa1365900 | 0.843942 | 1.027014e-58 | -8.615850e-47 |
| Msa1354750 | Msa1365900 | 0.845624 | 3.616154e-59 | -8.615850e-47 |
| Msa1354760 | Msa1365900 | 0.837662 | 4.554655e-57 | -8.615850e-47 |
| Msa1354810 | Msa1365900 | 0.810574 | 1.077190e-50 | -8.615850e-47 |
| Msa1354820 | Msa1365900 | 0.858164 | 9.942555e-63 | -8.615850e-47 |
| Msa1354860 | Msa1365900 | 0.815259 | 1.013245e-51 | -8.615850e-47 |
| Msa1354910 | Msa1365900 | 0.805603 | 1.232760e-49 | -8.615850e-47 |
| Msa1354920 | Msa1365900 | 0.824976 | 6.026373e-54 | -8.615850e-47 |
| Msa1354980 | Msa1365900 | 0.819768 | 9.762206e-53 | -8.615850e-47 |
| Msa1354990 | Msa1365900 | 0.862955 | 3.511215e-64 | -8.615850e-47 |
| Msa1355030 | Msa1365900 | 0.820607 | 6.271436e-53 | -8.615850e-47 |
| Msa1355070 | Msa1365900 | 0.805201 | 1.496266e-49 | -8.615850e-47 |
| Msa1355080 | Msa1365900 | 0.826254 | 3.001563e-54 | -8.615850e-47 |
| Msa1355090 | Msa1365900 | 0.819971 | 8.775370e-53 | -8.615850e-47 |
| Msa1365890 | Msa1365900 | 0.830457 | 2.904745e-55 | -8.615850e-47 |
| Msa1365900 | Msa1365950 | 0.842496 | 2.495089e-58 | -8.615850e-47 |
| Msa1365900 | Msa1365960 | 0.835413 | 1.702488e-56 | -8.615850e-47 |
| Msa1365900 | Msa1365970 | 0.841212 | 5.447743e-58 | -8.615850e-47 |
| Msa1365900 | Msa1366080 | 0.842587 | 2.360500e-58 | -8.615850e-47 |
| Msa1365900 | Msa1366090 | 0.900127 | 9.993272e-78 | -8.615850e-47 |
| Msa1365900 | Msa1368230 | 0.823536 | 1.313854e-53 | -8.615850e-47 |
| Msa1365900 | Msa1368240 | 0.827017 | 1.973050e-54 | -8.615850e-47 |
| Msa1365900 | Msa1380550 | 0.820744 | 5.835357e-53 | -8.615850e-47 |
| Msa1365900 | Msa1380600 | 0.808012 | 3.817204e-50 | -8.615850e-47 |
| Msa1365900 | Msa1380610 | 0.803354 | 3.628633e-49 | -8.615850e-47 |
| Msa1365900 | Msa1380620 | 0.805216 | 1.485709e-49 | -8.615850e-47 |
| Msa1365900 | Msa1385410 | 0.823355 | 1.448033e-53 | -8.615850e-47 |
| Msa1365900 | Msa1385420 | 0.849025 | 4.214430e-60 | -8.615850e-47 |
| Msa1365900 | Msa1391090 | 0.835225 | 1.899384e-56 | -8.615850e-47 |
| Msa1365900 | Msa1391100 | 0.840367 | 9.073794e-58 | -8.615850e-47 |
| Msa1365900 | Msa1391110 | 0.838175 | 3.361619e-57 | -8.615850e-47 |
| Msa1365900 | Msa1391160 | 0.825171 | 5.419979e-54 | -8.615850e-47 |
| Msa1365900 | Msa1391170 | 0.870621 | 1.270290e-66 | -8.615850e-47 |
| Msa1365900 | Msa1391220 | 0.839997 | 1.133626e-57 | -8.615850e-47 |
| Msa1365900 | Msa1391230 | 0.855599 | 5.662237e-62 | -8.615850e-47 |
| Msa1365900 | Msa1391240 | 0.838610 | 2.596096e-57 | -8.615850e-47 |
| Msa1365900 | Msa1394030 | 0.829325 | 5.482954e-55 | -8.615850e-47 |
| Msa1365900 | Msa1394040 | 0.818906 | 1.535158e-52 | -8.615850e-47 |
| Msa1365900 | Msa1394080 | 0.829840 | 4.108971e-55 | -8.615850e-47 |
| Msa1365900 | Msa1394150 | 0.814048 | 1.878808e-51 | -8.615850e-47 |
| Msa1365900 | Msa1394160 | 0.835522 | 1.598141e-56 | -8.615850e-47 |
| Msa1365900 | Msa1394210 | 0.812094 | 5.040057e-51 | -8.615850e-47 |
| Msa1365900 | Msa1394230 | 0.801588 | 8.389245e-49 | -8.615850e-47 |
| Msa1365900 | Msa1394250 | 0.810813 | 9.562879e-51 | -8.615850e-47 |
| Msa1365900 | Msa1394270 | 0.849426 | 3.258352e-60 | -8.615850e-47 |
| Msa1365900 | Msa1460120 | 0.802033 | 6.798192e-49 | -8.615850e-47 |
| Msa1365900 | Msa1460130 | 0.836829 | 7.438345e-57 | -8.615850e-47 |
| Msa0173880 | Msa1365900 | 0.812326 | 4.484860e-51 | -8.615850e-47 |
| Msa0202640 | Msa1365900 | 0.834810 | 2.416719e-56 | -8.615850e-47 |
| Msa1305090 | Msa1365900 | 0.826626 | 2.447008e-54 | -8.615850e-47 |
| Msa1342040 | Msa1365900 | 0.812009 | 5.260596e-51 | -8.615850e-47 |
| Msa0370210 | Msa1365900 | 0.825091 | 5.661617e-54 | -8.615850e-47 |
| Msa0405420 | Msa1365900 | 0.830388 | 3.019958e-55 | -8.615850e-47 |
| Msa0405430 | Msa1365900 | 0.817148 | 3.832106e-52 | -8.615850e-47 |
| Msa0405440 | Msa1365900 | 0.818257 | 2.154128e-52 | -8.615850e-47 |
| Msa0405510 | Msa1365900 | 0.837488 | 5.047019e-57 | -8.615850e-47 |
| Msa0405520 | Msa1365900 | 0.816899 | 4.358709e-52 | -8.615850e-47 |
| Msa0405530 | Msa1365900 | 0.827512 | 1.502017e-54 | -8.615850e-47 |
| Msa0983630 | Msa1365900 | 0.824152 | 9.424411e-54 | -8.615850e-47 |
| Msa0983640 | Msa1365900 | 0.842234 | 2.928947e-58 | -8.615850e-47 |
| Msa0983680 | Msa1365900 | 0.817962 | 2.511823e-52 | -8.615850e-47 |
| Msa1022050 | Msa1365900 | 0.831719 | 1.423089e-55 | -8.615850e-47 |
| Msa1022060 | Msa1365900 | 0.855105 | 7.885528e-62 | -8.615850e-47 |
| Msa1064410 | Msa1365900 | 0.834897 | 2.297726e-56 | -8.615850e-47 |
| Msa1086030 | Msa1365900 | 0.806976 | 6.332984e-50 | -8.615850e-47 |
| Msa1086070 | Msa1365900 | 0.812764 | 3.598129e-51 | -8.615850e-47 |
| Msa1086080 | Msa1365900 | 0.815716 | 8.017079e-52 | -8.615850e-47 |
| Msa1086090 | Msa1365900 | 0.832875 | 7.365693e-56 | -8.615850e-47 |
| Msa1086140 | Msa1365900 | 0.834307 | 3.233854e-56 | -8.615850e-47 |
| Msa1086180 | Msa1365900 | 0.814103 | 1.826710e-51 | -8.615850e-47 |
| Msa1086190 | Msa1365900 | 0.804515 | 2.081991e-49 | -8.615850e-47 |
| Msa1086200 | Msa1365900 | 0.833707 | 4.568736e-56 | -8.615850e-47 |
| Msa1086270 | Msa1365900 | 0.827803 | 1.278874e-54 | -8.615850e-47 |
| Msa1086280 | Msa1365900 | 0.801801 | 7.585580e-49 | -8.615850e-47 |
| Msa1086300 | Msa1365900 | 0.816034 | 6.806667e-52 | -8.615850e-47 |
| Msa1086320 | Msa1365900 | 0.813447 | 2.548357e-51 | -8.615850e-47 |
| Msa1086350 | Msa1365900 | 0.815583 | 8.583358e-52 | -8.615850e-47 |
| Msa1086360 | Msa1365900 | 0.803537 | 3.325213e-49 | -8.615850e-47 |
| Msa1086380 | Msa1365900 | 0.806587 | 7.651264e-50 | -8.615850e-47 |
| Msa1086420 | Msa1365900 | 0.809061 | 2.278664e-50 | -8.615850e-47 |
| Msa1086450 | Msa1365900 | 0.805524 | 1.280620e-49 | -8.615850e-47 |
| Msa1086470 | Msa1365900 | 0.811614 | 6.410059e-51 | -8.615850e-47 |
| Msa1086510 | Msa1365900 | 0.823839 | 1.115859e-53 | -8.615850e-47 |
| Msa1086550 | Msa1365900 | 0.846572 | 1.996003e-59 | -8.615850e-47 |
| Msa1086590 | Msa1365900 | 0.810187 | 1.305818e-50 | -8.615850e-47 |
| Msa1086600 | Msa1365900 | 0.836158 | 1.102757e-56 | -8.615850e-47 |
| Msa1086640 | Msa1365900 | 0.818560 | 1.839095e-52 | -8.615850e-47 |
| Msa1086660 | Msa1365900 | 0.802710 | 4.931501e-49 | -8.615850e-47 |
| Msa1086680 | Msa1365900 | 0.812080 | 5.074318e-51 | -8.615850e-47 |
| Msa1086720 | Msa1365900 | 0.845171 | 4.796259e-59 | -8.615850e-47 |
| Msa1086730 | Msa1365900 | 0.840942 | 6.416707e-58 | -8.615850e-47 |
| Msa1086740 | Msa1365900 | 0.827360 | 1.633020e-54 | -8.615850e-47 |
| Msa1086790 | Msa1365900 | 0.839921 | 1.186384e-57 | -8.615850e-47 |
| Msa1086800 | Msa1365900 | 0.852077 | 5.847141e-61 | -8.615850e-47 |
| Msa1086880 | Msa1365900 | 0.805677 | 1.189415e-49 | -8.615850e-47 |
| Msa1086890 | Msa1365900 | 0.818391 | 2.008970e-52 | -8.615850e-47 |
| Msa1086900 | Msa1365900 | 0.827195 | 1.789159e-54 | -8.615850e-47 |
| Msa1086960 | Msa1365900 | 0.839615 | 1.425644e-57 | -8.615850e-47 |
| Msa1086970 | Msa1365900 | 0.820944 | 5.246663e-53 | -8.615850e-47 |
| Msa1087030 | Msa1365900 | 0.850763 | 1.375983e-60 | -8.615850e-47 |
| Msa1087040 | Msa1365900 | 0.864023 | 1.638487e-64 | -8.615850e-47 |
| Msa1087050 | Msa1365900 | 0.838126 | 3.459772e-57 | -8.615850e-47 |
| Msa1087110 | Msa1365900 | 0.846683 | 1.862406e-59 | -8.615850e-47 |
| Msa1087120 | Msa1365900 | 0.810730 | 9.966115e-51 | -8.615850e-47 |
| Msa1091700 | Msa1365900 | 0.820651 | 6.129389e-53 | -8.615850e-47 |
| Msa0268170 | Msa1365900 | 0.808104 | 3.648597e-50 | -8.615850e-47 |
| Msa0268190 | Msa1365900 | 0.816183 | 6.307123e-52 | -8.615850e-47 |
| Msa0268210 | Msa1365900 | 0.810766 | 9.792864e-51 | -8.615850e-47 |
| Msa0268250 | Msa1365900 | 0.852165 | 5.519170e-61 | -8.615850e-47 |
| Msa0268260 | Msa1365900 | 0.834199 | 3.441635e-56 | -8.615850e-47 |
| Msa0268270 | Msa1365900 | 0.837665 | 4.545373e-57 | -8.615850e-47 |
| Msa0268300 | Msa1365900 | 0.838891 | 2.196366e-57 | -8.615850e-47 |
| Msa0268310 | Msa1365900 | 0.838431 | 2.887274e-57 | -8.615850e-47 |
| Msa0268350 | Msa1365900 | 0.813447 | 2.548463e-51 | -8.615850e-47 |
| Msa0268390 | Msa1365900 | 0.807750 | 4.339023e-50 | -8.615850e-47 |
| Msa0268400 | Msa1365900 | 0.802495 | 5.459171e-49 | -8.615850e-47 |
| Msa0268410 | Msa1365900 | 0.813331 | 2.701942e-51 | -8.615850e-47 |
| Msa0268430 | Msa1365900 | 0.814142 | 1.791162e-51 | -8.615850e-47 |
| Msa0268450 | Msa1365900 | 0.814392 | 1.577309e-51 | -8.615850e-47 |
| Msa0268510 | Msa1365900 | 0.812206 | 4.763451e-51 | -8.615850e-47 |
| Msa0268550 | Msa1365900 | 0.825256 | 5.175319e-54 | -8.615850e-47 |
| Msa0268560 | Msa1365900 | 0.813788 | 2.143636e-51 | -8.615850e-47 |
| Msa0268570 | Msa1365900 | 0.825098 | 5.641436e-54 | -8.615850e-47 |
| Msa0268630 | Msa1365900 | 0.826955 | 2.041684e-54 | -8.615850e-47 |
| Msa0268660 | Msa1365900 | 0.803955 | 2.722217e-49 | -8.615850e-47 |
| Msa0268670 | Msa1365900 | 0.813426 | 2.574859e-51 | -8.615850e-47 |
| Msa0268700 | Msa1365900 | 0.835855 | 1.316271e-56 | -8.615850e-47 |
| Msa0268740 | Msa1365900 | 0.826930 | 2.070358e-54 | -8.615850e-47 |
| Msa0268750 | Msa1365900 | 0.826891 | 2.114834e-54 | -8.615850e-47 |
| Msa0268830 | Msa1365900 | 0.834472 | 2.938089e-56 | -8.615850e-47 |
| Msa0268860 | Msa1365900 | 0.806502 | 7.974360e-50 | -8.615850e-47 |
| Msa0268940 | Msa1365900 | 0.823320 | 1.476237e-53 | -8.615850e-47 |
| Msa0268950 | Msa1365900 | 0.801398 | 9.176759e-49 | -8.615850e-47 |
| Msa0268960 | Msa1365900 | 0.830705 | 2.526212e-55 | -8.615850e-47 |
| Msa0269040 | Msa1365900 | 0.835767 | 1.385660e-56 | -8.615850e-47 |
| Msa0269050 | Msa1365900 | 0.808117 | 3.624877e-50 | -8.615850e-47 |
| Msa0269070 | Msa1365900 | 0.818830 | 1.597434e-52 | -8.615850e-47 |
| Msa0269090 | Msa1365900 | 0.816347 | 5.795569e-52 | -8.615850e-47 |
| Msa0269130 | Msa1365900 | 0.863505 | 2.373209e-64 | -8.615850e-47 |
| Msa0269140 | Msa1365900 | 0.846910 | 1.613797e-59 | -8.615850e-47 |
| Msa0269150 | Msa1365900 | 0.836775 | 7.678381e-57 | -8.615850e-47 |
| Msa0344190 | Msa1365900 | 0.815115 | 1.090598e-51 | -8.615850e-47 |
| Msa0344210 | Msa1365900 | 0.806198 | 9.240022e-50 | -8.615850e-47 |
| Msa0344260 | Msa1365900 | 0.833658 | 4.699273e-56 | -8.615850e-47 |
| Msa0344280 | Msa1365900 | 0.810437 | 1.153292e-50 | -8.615850e-47 |
| Msa0344310 | Msa1365900 | 0.819042 | 1.429329e-52 | -8.615850e-47 |
| Msa1143120 | Msa1365900 | 0.827379 | 1.616568e-54 | -8.615850e-47 |
| Msa1143130 | Msa1365900 | 0.805323 | 1.411216e-49 | -8.615850e-47 |
| Msa1143160 | Msa1365900 | 0.801881 | 7.304719e-49 | -8.615850e-47 |
| Msa1143170 | Msa1365900 | 0.822812 | 1.938489e-53 | -8.615850e-47 |
| Msa1143180 | Msa1365900 | 0.802090 | 6.616044e-49 | -8.615850e-47 |
| Msa0484040 | Msa1365900 | 0.808530 | 2.959758e-50 | -8.615850e-47 |
| Msa0582510 | Msa1365900 | 0.836859 | 7.311344e-57 | -8.615850e-47 |
| Msa0582540 | Msa1365900 | 0.801945 | 7.087778e-49 | -8.615850e-47 |
| Msa0582560 | Msa1365900 | 0.807858 | 4.116212e-50 | -8.615850e-47 |
| Msa0582590 | Msa1365900 | 0.806239 | 9.060813e-50 | -8.615850e-47 |
| Msa0582630 | Msa1365900 | 0.809092 | 2.244390e-50 | -8.615850e-47 |
| Msa0582640 | Msa1365900 | 0.829358 | 5.383272e-55 | -8.615850e-47 |
| Msa0582650 | Msa1365900 | 0.818942 | 1.506352e-52 | -8.615850e-47 |
| Msa0582690 | Msa1365900 | 0.828858 | 7.116639e-55 | -8.615850e-47 |
| Msa0582700 | Msa1365900 | 0.814645 | 1.386332e-51 | -8.615850e-47 |
| Msa0582750 | Msa1365900 | 0.805238 | 1.470183e-49 | -8.615850e-47 |
| Msa0582760 | Msa1365900 | 0.828585 | 8.283743e-55 | -8.615850e-47 |
| Msa0582770 | Msa1365900 | 0.824360 | 8.419192e-54 | -8.615850e-47 |
| Msa0582780 | Msa1365900 | 0.809640 | 1.711986e-50 | -8.615850e-47 |
| Msa0582810 | Msa1365900 | 0.836281 | 1.025970e-56 | -8.615850e-47 |
| Msa0582820 | Msa1365900 | 0.808851 | 2.527122e-50 | -8.615850e-47 |
| Msa0582840 | Msa1365900 | 0.807003 | 6.248711e-50 | -8.615850e-47 |
| Msa0582860 | Msa1365900 | 0.810271 | 1.252314e-50 | -8.615850e-47 |
| Msa0582870 | Msa1365900 | 0.800425 | 1.449932e-48 | -8.615850e-47 |
| Msa0582890 | Msa1365900 | 0.805862 | 1.087716e-49 | -8.615850e-47 |
| Msa0582910 | Msa1365900 | 0.816315 | 5.891699e-52 | -8.615850e-47 |
| Msa0582920 | Msa1365900 | 0.820849 | 5.518300e-53 | -8.615850e-47 |
| Msa0591310 | Msa1365900 | 0.844548 | 7.063675e-59 | -8.615850e-47 |
| Msa0591350 | Msa1365900 | 0.847250 | 1.302382e-59 | -8.615850e-47 |
| Msa0591360 | Msa1365900 | 0.834218 | 3.402792e-56 | -8.615850e-47 |
| Msa0591380 | Msa1365900 | 0.813328 | 2.706605e-51 | -8.615850e-47 |
| Msa0867680 | Msa1365900 | 0.833583 | 4.905539e-56 | -8.615850e-47 |
| Msa0867690 | Msa1365900 | 0.839442 | 1.580490e-57 | -8.615850e-47 |
| Msa0908220 | Msa1365900 | 0.848964 | 4.379647e-60 | -8.615850e-47 |
| Msa0908230 | Msa1365900 | 0.849286 | 3.563620e-60 | -8.615850e-47 |
| Msa0908240 | Msa1365900 | 0.821454 | 4.003811e-53 | -8.615850e-47 |
| Msa0908310 | Msa1365900 | 0.831361 | 1.743221e-55 | -8.615850e-47 |
| Msa0908320 | Msa1365900 | 0.850659 | 1.471400e-60 | -8.615850e-47 |
| Msa0908370 | Msa1365900 | 0.817752 | 2.801313e-52 | -8.615850e-47 |
| Msa0908380 | Msa1365900 | 0.855585 | 5.714800e-62 | -8.615850e-47 |
| Msa0908430 | Msa1365900 | 0.852715 | 3.847597e-61 | -8.615850e-47 |
| Msa0908440 | Msa1365900 | 0.851160 | 1.063563e-60 | -8.615850e-47 |
| Msa0908450 | Msa1365900 | 0.828117 | 1.074468e-54 | -8.615850e-47 |
| Msa0908480 | Msa1365900 | 0.820346 | 7.198812e-53 | -8.615850e-47 |
| Msa0908530 | Msa1365900 | 0.832492 | 9.167947e-56 | -8.615850e-47 |
| Msa0908540 | Msa1365900 | 0.851000 | 1.179901e-60 | -8.615850e-47 |
| Msa0908590 | Msa1365900 | 0.844882 | 5.741464e-59 | -8.615850e-47 |
| Msa0908600 | Msa1365900 | 0.821940 | 3.090121e-53 | -8.615850e-47 |
| Msa0908610 | Msa1365900 | 0.806299 | 8.800845e-50 | -8.615850e-47 |
| Msa0908650 | Msa1365900 | 0.855091 | 7.961805e-62 | -8.615850e-47 |
| Msa0908660 | Msa1365900 | 0.831816 | 1.346730e-55 | -8.615850e-47 |
| Msa0908670 | Msa1365900 | 0.825369 | 4.866192e-54 | -8.615850e-47 |
| Msa0908720 | Msa1365900 | 0.820920 | 5.314288e-53 | -8.615850e-47 |
| Msa0908730 | Msa1365900 | 0.852998 | 3.194981e-61 | -8.615850e-47 |
| Msa0911190 | Msa1365900 | 0.808083 | 3.685975e-50 | -8.615850e-47 |
| Msa0911200 | Msa1365900 | 0.842408 | 2.633119e-58 | -8.615850e-47 |
| Msa0924830 | Msa1365900 | 0.863059 | 3.261307e-64 | -8.615850e-47 |
| Msa0924850 | Msa1365900 | 0.802617 | 5.153501e-49 | -8.615850e-47 |
| Msa0924870 | Msa1365900 | 0.803924 | 2.764163e-49 | -8.615850e-47 |
| Msa0924880 | Msa1365900 | 0.821451 | 4.009744e-53 | -8.615850e-47 |
| Msa0924930 | Msa1365900 | 0.831012 | 2.124519e-55 | -8.615850e-47 |
| Msa0924940 | Msa1365900 | 0.886824 | 2.442176e-72 | -8.615850e-47 |
| Msa0925040 | Msa1365900 | 0.810664 | 1.030271e-50 | -8.615850e-47 |
| Msa0925100 | Msa1365900 | 0.825821 | 3.802279e-54 | -8.615850e-47 |
| Msa0925110 | Msa1365900 | 0.874952 | 4.514332e-68 | -8.615850e-47 |
| Msa0931070 | Msa1365900 | 0.830865 | 2.308112e-55 | -8.615850e-47 |
| Msa0931080 | Msa1365900 | 0.812474 | 4.163399e-51 | -8.615850e-47 |
| Msa0931130 | Msa1365900 | 0.831305 | 1.799487e-55 | -8.615850e-47 |
| Msa0931140 | Msa1365900 | 0.803499 | 3.386707e-49 | -8.615850e-47 |
| Msa0931220 | Msa1365900 | 0.822339 | 2.497336e-53 | -8.615850e-47 |
| Msa0931230 | Msa1365900 | 0.822344 | 2.491337e-53 | -8.615850e-47 |
| Msa0931260 | Msa1365900 | 0.844059 | 9.559343e-59 | -8.615850e-47 |
| Msa0931270 | Msa1365900 | 0.808356 | 3.225065e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365900 | MtrunA17_Chr1g0195541 | 99.242 | 132 | 1 | 0 | 1 | 132 | 1 | 132 | 3.20e-90 | 265 |
| Msa1365900 | MtrunA17_CPg0492431 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 1.09e-88 | 265 |
| Msa1365900 | MtrunA17_Chr3g0090851 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 1.09e-88 | 265 |
| Msa1365900 | MtrunA17_Chr4g0016091 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 1.09e-88 | 265 |
| Msa1365900 | MtrunA17_Chr3g0090871 | 98.851 | 87 | 1 | 0 | 191 | 277 | 1 | 87 | 1.28e-54 | 175 |
| Msa1365900 | MtrunA17_CPg0492451 | 98.851 | 87 | 1 | 0 | 191 | 277 | 1 | 87 | 9.77e-54 | 173 |
| Msa1365900 | MtrunA17_Chr4g0016071 | 98.851 | 87 | 1 | 0 | 191 | 277 | 1 | 87 | 9.77e-54 | 173 |
| Msa1365900 | MtrunA17_Chr1g0153231 | 97.297 | 74 | 2 | 0 | 58 | 131 | 1 | 74 | 2.45e-45 | 147 |
| Msa1365900 | MtrunA17_CPg0492181 | 25.738 | 237 | 158 | 7 | 6 | 238 | 147 | 369 | 1.61e-14 | 73.6 |
| Msa1365900 | MtrunA17_Chr4g0000831 | 26.087 | 230 | 152 | 7 | 6 | 231 | 32 | 247 | 3.11e-14 | 71.2 |
| Msa1365900 | MtrunA17_Chr0c03g0489881 | 34.459 | 148 | 86 | 4 | 129 | 276 | 2 | 138 | 3.14e-13 | 67.4 |
| Msa1365900 | MtrunA17_MTg0491931 | 34.459 | 148 | 86 | 4 | 129 | 276 | 2 | 138 | 3.14e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365900 | ATCG00890.1 | 93.502 | 277 | 11 | 1 | 1 | 277 | 1 | 270 | 1.15e-172 | 483 |
| Msa1365900 | ATCG01250.1 | 93.502 | 277 | 11 | 1 | 1 | 277 | 1 | 270 | 1.15e-172 | 483 |
| Msa1365900 | ATCG01010.1 | 26.496 | 234 | 154 | 7 | 9 | 238 | 130 | 349 | 8.07e-14 | 72.0 |
| Msa1365900 | AT2G07689.1 | 34.228 | 149 | 85 | 5 | 129 | 276 | 2 | 138 | 1.58e-12 | 65.9 |
Find 61 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGATATGTAATTAT+TGG | 0.189063 | tig0018442:+24926 | Msa1365900:CDS |
| CATGGTTTCTCTTGGCTATA+TGG | 0.197078 | tig0018442:+23833 | Msa1365900:CDS |
| TGGGGCAAGCTCTTCTATTC+TGG | 0.197255 | tig0018442:+23808 | Msa1365900:CDS |
| GCTATTCTTAGCATGCTATT+AGG | 0.213688 | tig0018442:+24842 | Msa1365900:CDS |
| TTTGCTTGCATTGTGTTATT+TGG | 0.223841 | tig0018442:+25031 | Msa1365900:CDS |
| ATTAGACCGTACATCTTTCT+TGG | 0.278852 | tig0018442:-23756 | None:intergenic |
| ATATTCATCACTGTAGGAAT+TGG | 0.280413 | tig0018442:+23947 | Msa1365900:CDS |
| TCGTTTGATGAGAAATAAAA+AGG | 0.282633 | tig0018442:-24794 | None:intergenic |
| AGCTCTTCTATTCTGGTTCA+TGG | 0.287942 | tig0018442:+23815 | Msa1365900:CDS |
| CTATTCTTAGCATGCTATTA+GGG | 0.301257 | tig0018442:+24843 | Msa1365900:CDS |
| TATTCGTCCATAGGTCAAAT+TGG | 0.303171 | tig0018442:+24911 | Msa1365900:CDS |
| GCATACGTTTCATGCTTGTT+TGG | 0.326865 | tig0018442:-24883 | None:intergenic |
| TTCTGGTTCATGGTTTCTCT+TGG | 0.336946 | tig0018442:+23825 | Msa1365900:CDS |
| GGCTAAAGAGAGAGCCAAAA+AGG | 0.344421 | tig0018442:-25109 | None:intergenic |
| TTATGCTCCTATCTACTATC+TGG | 0.367530 | tig0018442:+23728 | Msa1365900:CDS |
| CATACGTTTCATGCTTGTTT+GGG | 0.369828 | tig0018442:-24882 | None:intergenic |
| GTAATTATTGGAATAATTGT+TGG | 0.373428 | tig0018442:+24938 | Msa1365900:CDS |
| CCCTAGCCCCTTCTCATCAA+TGG | 0.393307 | tig0018442:+23981 | Msa1365900:CDS |
| GTGTTATTTGGTCTACGTAC+TGG | 0.413420 | tig0018442:+25043 | Msa1365900:CDS |
| TATTCATCACTGTAGGAATT+GGG | 0.417349 | tig0018442:+23948 | Msa1365900:CDS |
| TCTTGGCTATATGGTTCGTC+CGG | 0.418558 | tig0018442:+23842 | Msa1365900:CDS |
| TACATATCCAATTTGACCTA+TGG | 0.420081 | tig0018442:-24918 | None:intergenic |
| AGCAAAAGTTCCTAGATTCA+TGG | 0.448640 | tig0018442:-25014 | None:intergenic |
| TTCTATATCTCCATGAATCT+AGG | 0.460861 | tig0018442:+25004 | Msa1365900:CDS |
| CTTGGCTATATGGTTCGTCC+GGG | 0.468938 | tig0018442:+23843 | Msa1365900:CDS |
| TACTATGAAATATTTACTCA+TGG | 0.474204 | tig0018442:+23784 | Msa1365900:CDS |
| GGTATATCCAGATAGTAGAT+AGG | 0.488329 | tig0018442:-23735 | None:intergenic |
| ATAAGCGCAATTGAAATTCC+AGG | 0.496050 | tig0018442:-23926 | None:intergenic |
| TGAAATATTTACTCATGGGT+GGG | 0.506663 | tig0018442:+23789 | Msa1365900:CDS |
| TCCATTGATGAGAAGGGGCT+AGG | 0.510524 | tig0018442:-23982 | None:intergenic |
| ATGCTTGCTTATTCGTCCAT+AGG | 0.517225 | tig0018442:+24902 | Msa1365900:CDS |
| TTGAAGCTCTATCTCTCCCC+CGG | 0.517737 | tig0018442:-23861 | None:intergenic |
| TTTATTTCTCATCAAACGAA+TGG | 0.522523 | tig0018442:+24798 | Msa1365900:CDS |
| ACACAAATGTATAACTCCCC+TGG | 0.530663 | tig0018442:+23908 | Msa1365900:CDS |
| GATAACATTCGAGATTATGC+AGG | 0.531827 | tig0018442:+25070 | Msa1365900:CDS |
| ATGAAATATTTACTCATGGG+TGG | 0.533610 | tig0018442:+23788 | Msa1365900:CDS |
| GAAATATTTACTCATGGGTG+GGG | 0.537789 | tig0018442:+23790 | Msa1365900:CDS |
| CAGGAGTCCATTGATGAGAA+GGG | 0.542754 | tig0018442:-23988 | None:intergenic |
| GAGCTTCAAGAAATAGTGAA+TGG | 0.546870 | tig0018442:+23875 | Msa1365900:CDS |
| ATAATTGTTGGAGACTCAAA+TGG | 0.548093 | tig0018442:+24950 | Msa1365900:CDS |
| TCAGGAGTCCATTGATGAGA+AGG | 0.551074 | tig0018442:-23989 | None:intergenic |
| AGAAAAGCAACGACTGGAGT+CGG | 0.551106 | tig0018442:-24716 | None:intergenic |
| CCATTGATGAGAAGGGGCTA+GGG | 0.552174 | tig0018442:-23981 | None:intergenic |
| TTCATATTAACCGCTACTCT+AGG | 0.552712 | tig0018442:+23641 | Msa1365900:CDS |
| GAAAGATGTACGGTCTAATG+AGG | 0.565206 | tig0018442:+23760 | Msa1365900:CDS |
| TAAGCGCAATTGAAATTCCA+GGG | 0.565360 | tig0018442:-23925 | None:intergenic |
| GGAGAGTCAGAGTCGAAAAG+AGG | 0.572366 | tig0018442:-24695 | None:intergenic |
| TGGCTATATGGTTCGTCCGG+GGG | 0.574450 | tig0018442:+23845 | Msa1365900:CDS |
| ATAGCATGCTAAGAATAGCT+AGG | 0.576533 | tig0018442:-24838 | None:intergenic |
| ACAGAAAGAAAAGCAACGAC+TGG | 0.577795 | tig0018442:-24722 | None:intergenic |
| TTGGCTATATGGTTCGTCCG+GGG | 0.582473 | tig0018442:+23844 | Msa1365900:CDS |
| ACTATGAAATATTTACTCAT+GGG | 0.584827 | tig0018442:+23785 | Msa1365900:CDS |
| GCGCTTATATTCATCACTGT+AGG | 0.594447 | tig0018442:+23941 | Msa1365900:CDS |
| TTGAATGAGAGAAAGAAGTG+AGG | 0.599130 | tig0018442:+24669 | Msa1365900:intron |
| ATATTAACCGCTACTCTAGG+AGG | 0.609728 | tig0018442:+23644 | Msa1365900:CDS |
| GATATACCAAGAAAGATGTA+CGG | 0.625842 | tig0018442:+23750 | Msa1365900:CDS |
| ATTGTTGGAGACTCAAATGG+TGG | 0.626325 | tig0018442:+24953 | Msa1365900:CDS |
| AGGAGTCCATTGATGAGAAG+GGG | 0.632944 | tig0018442:-23987 | None:intergenic |
| AGGAATATCGAAAATTCGAG+TGG | 0.650147 | tig0018442:-24774 | None:intergenic |
| AAACATTCCTCCTAGAGTAG+CGG | 0.663526 | tig0018442:-23651 | None:intergenic |
| AAGCGCAATTGAAATTCCAG+GGG | 0.720091 | tig0018442:-23924 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | tig0018442:24145-24164 | Msa1365900:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | tig0018442:24458-24477 | Msa1365900:intron | 15.0% |
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | tig0018442:24145-24164 | Msa1365900:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | tig0018442:24458-24477 | Msa1365900:intron | 15.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | tig0018442:23784-23803 | Msa1365900:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | tig0018442:23785-23804 | Msa1365900:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | tig0018442:24214-24233 | Msa1365900:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | tig0018442:24535-24554 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | tig0018442:24535-24554 | Msa1365900:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | tig0018442:24926-24945 | Msa1365900:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | tig0018442:24938-24957 | Msa1365900:CDS | 20.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | tig0018442:23784-23803 | Msa1365900:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | tig0018442:23785-23804 | Msa1365900:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | tig0018442:24214-24233 | Msa1365900:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | tig0018442:24535-24554 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | tig0018442:24535-24554 | Msa1365900:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | tig0018442:24926-24945 | Msa1365900:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | tig0018442:24938-24957 | Msa1365900:CDS | 20.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | tig0018442:24074-24093 | Msa1365900:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | tig0018442:24133-24152 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | tig0018442:24215-24234 | Msa1365900:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | tig0018442:24246-24265 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | tig0018442:24274-24293 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | tig0018442:24541-24560 | Msa1365900:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | - | tig0018442:24610-24629 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | + | tig0018442:24614-24633 | Msa1365900:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | tig0018442:24797-24816 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | tig0018442:24798-24817 | Msa1365900:CDS | 25.0% |
| !! | TATACACAAAAGATCCTTTT+TGG | + | tig0018442:25095-25114 | Msa1365900:CDS | 25.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | tig0018442:24074-24093 | Msa1365900:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | tig0018442:24133-24152 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | tig0018442:24215-24234 | Msa1365900:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | tig0018442:24246-24265 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | tig0018442:24274-24293 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | tig0018442:24541-24560 | Msa1365900:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | - | tig0018442:24610-24629 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | + | tig0018442:24614-24633 | Msa1365900:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | tig0018442:24797-24816 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | tig0018442:24798-24817 | Msa1365900:CDS | 25.0% |
| !! | TATACACAAAAGATCCTTTT+TGG | + | tig0018442:25095-25114 | Msa1365900:CDS | 25.0% |
| GATATACCAAGAAAGATGTA+CGG | + | tig0018442:23750-23769 | Msa1365900:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | tig0018442:23788-23807 | Msa1365900:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | tig0018442:23789-23808 | Msa1365900:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | tig0018442:23947-23966 | Msa1365900:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | tig0018442:23948-23967 | Msa1365900:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | tig0018442:24055-24074 | Msa1365900:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | tig0018442:24320-24339 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | tig0018442:24320-24339 | Msa1365900:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | tig0018442:24420-24439 | Msa1365900:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | tig0018442:24843-24862 | Msa1365900:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | tig0018442:24921-24940 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | tig0018442:24950-24969 | Msa1365900:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | tig0018442:25004-25023 | Msa1365900:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | tig0018442:25031-25050 | Msa1365900:CDS | 30.0% |
| GATATACCAAGAAAGATGTA+CGG | + | tig0018442:23750-23769 | Msa1365900:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | tig0018442:23788-23807 | Msa1365900:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | tig0018442:23789-23808 | Msa1365900:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | tig0018442:23947-23966 | Msa1365900:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | tig0018442:23948-23967 | Msa1365900:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | tig0018442:24055-24074 | Msa1365900:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | tig0018442:24320-24339 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | tig0018442:24320-24339 | Msa1365900:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | tig0018442:24420-24439 | Msa1365900:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | tig0018442:24843-24862 | Msa1365900:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | tig0018442:24921-24940 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | tig0018442:24950-24969 | Msa1365900:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | tig0018442:25004-25023 | Msa1365900:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | tig0018442:25031-25050 | Msa1365900:CDS | 30.0% |
| TTCATATTAACCGCTACTCT+AGG | + | tig0018442:23641-23660 | Msa1365900:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | tig0018442:23728-23747 | Msa1365900:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | tig0018442:23738-23757 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | tig0018442:23759-23778 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | tig0018442:23790-23809 | Msa1365900:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | tig0018442:23875-23894 | Msa1365900:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | tig0018442:23928-23947 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | tig0018442:23929-23948 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | tig0018442:24049-24068 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | tig0018442:24053-24072 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | tig0018442:24187-24206 | Msa1365900:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | tig0018442:24197-24216 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | tig0018442:24222-24241 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | tig0018442:24287-24306 | Msa1365900:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | tig0018442:24392-24411 | Msa1365900:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | tig0018442:24428-24447 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | tig0018442:24429-24448 | Msa1365900:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | tig0018442:24448-24467 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | tig0018442:24669-24688 | Msa1365900:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | tig0018442:24777-24796 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | tig0018442:24841-24860 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | tig0018442:24842-24861 | Msa1365900:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | tig0018442:24885-24904 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | tig0018442:24911-24930 | Msa1365900:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | tig0018442:25017-25036 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | tig0018442:25070-25089 | Msa1365900:CDS | 35.0% | |
| TTCATATTAACCGCTACTCT+AGG | + | tig0018442:23641-23660 | Msa1365900:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | tig0018442:23728-23747 | Msa1365900:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | tig0018442:23738-23757 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | tig0018442:23759-23778 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | tig0018442:23790-23809 | Msa1365900:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | tig0018442:23875-23894 | Msa1365900:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | tig0018442:23928-23947 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | tig0018442:23929-23948 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | tig0018442:24049-24068 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | tig0018442:24053-24072 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | tig0018442:24187-24206 | Msa1365900:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | tig0018442:24197-24216 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | tig0018442:24222-24241 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | tig0018442:24287-24306 | Msa1365900:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | tig0018442:24392-24411 | Msa1365900:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | tig0018442:24428-24447 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | tig0018442:24429-24448 | Msa1365900:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | tig0018442:24448-24467 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | tig0018442:24669-24688 | Msa1365900:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | tig0018442:24777-24796 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | tig0018442:24841-24860 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | tig0018442:24842-24861 | Msa1365900:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | tig0018442:24885-24904 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | tig0018442:24911-24930 | Msa1365900:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | tig0018442:25017-25036 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | tig0018442:25070-25089 | Msa1365900:CDS | 35.0% | |
| ATATTAACCGCTACTCTAGG+AGG | + | tig0018442:23644-23663 | Msa1365900:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | tig0018442:23654-23673 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | tig0018442:23760-23779 | Msa1365900:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | tig0018442:23815-23834 | Msa1365900:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | tig0018442:23825-23844 | Msa1365900:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | tig0018442:23833-23852 | Msa1365900:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | tig0018442:23908-23927 | Msa1365900:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | tig0018442:23927-23946 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | tig0018442:23941-23960 | Msa1365900:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | tig0018442:24160-24179 | Msa1365900:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | tig0018442:24188-24207 | Msa1365900:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | tig0018442:24196-24215 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | tig0018442:24351-24370 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | tig0018442:24369-24388 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | tig0018442:24370-24389 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | tig0018442:24481-24500 | Msa1365900:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | tig0018442:24500-24519 | Msa1365900:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | tig0018442:24506-24525 | Msa1365900:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | tig0018442:24510-24529 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | tig0018442:24725-24744 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | tig0018442:24886-24905 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | tig0018442:24902-24921 | Msa1365900:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | tig0018442:24953-24972 | Msa1365900:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | tig0018442:25043-25062 | Msa1365900:CDS | 40.0% |
| ATATTAACCGCTACTCTAGG+AGG | + | tig0018442:23644-23663 | Msa1365900:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | tig0018442:23654-23673 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | tig0018442:23760-23779 | Msa1365900:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | tig0018442:23815-23834 | Msa1365900:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | tig0018442:23825-23844 | Msa1365900:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | tig0018442:23833-23852 | Msa1365900:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | tig0018442:23908-23927 | Msa1365900:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | tig0018442:23927-23946 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | tig0018442:23941-23960 | Msa1365900:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | tig0018442:24160-24179 | Msa1365900:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | tig0018442:24188-24207 | Msa1365900:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | tig0018442:24196-24215 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | tig0018442:24351-24370 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | tig0018442:24369-24388 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | tig0018442:24370-24389 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | tig0018442:24481-24500 | Msa1365900:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | tig0018442:24500-24519 | Msa1365900:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | tig0018442:24506-24525 | Msa1365900:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | tig0018442:24510-24529 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | tig0018442:24725-24744 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | tig0018442:24886-24905 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | tig0018442:24902-24921 | Msa1365900:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | tig0018442:24953-24972 | Msa1365900:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | tig0018442:25043-25062 | Msa1365900:CDS | 40.0% |
| TCTTGGCTATATGGTTCGTC+CGG | + | tig0018442:23842-23861 | Msa1365900:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | tig0018442:23990-24009 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | tig0018442:23991-24010 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | tig0018442:23992-24011 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | tig0018442:24001-24020 | Msa1365900:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | tig0018442:24008-24027 | Msa1365900:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | tig0018442:24106-24125 | Msa1365900:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | tig0018442:24123-24142 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | tig0018442:24124-24143 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | tig0018442:24175-24194 | Msa1365900:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | tig0018442:24339-24358 | Msa1365900:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | tig0018442:24494-24513 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | tig0018442:24559-24578 | Msa1365900:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | tig0018442:24563-24582 | Msa1365900:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | tig0018442:24642-24661 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | tig0018442:24644-24663 | Msa1365900:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | tig0018442:24719-24738 | None:intergenic | 45.0% | |
| TCTTGGCTATATGGTTCGTC+CGG | + | tig0018442:23842-23861 | Msa1365900:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | tig0018442:23990-24009 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | tig0018442:23991-24010 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | tig0018442:23992-24011 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | tig0018442:24001-24020 | Msa1365900:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | tig0018442:24008-24027 | Msa1365900:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | tig0018442:24106-24125 | Msa1365900:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | tig0018442:24123-24142 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | tig0018442:24124-24143 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | tig0018442:24175-24194 | Msa1365900:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | tig0018442:24339-24358 | Msa1365900:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | tig0018442:24494-24513 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | tig0018442:24559-24578 | Msa1365900:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | tig0018442:24563-24582 | Msa1365900:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | tig0018442:24642-24661 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | tig0018442:24644-24663 | Msa1365900:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | tig0018442:24719-24738 | None:intergenic | 45.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | + | tig0018442:23808-23827 | Msa1365900:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | tig0018442:23843-23862 | Msa1365900:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | tig0018442:23844-23863 | Msa1365900:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | - | tig0018442:23864-23883 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | tig0018442:23984-24003 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | tig0018442:23985-24004 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | tig0018442:24010-24029 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | tig0018442:24440-24459 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | tig0018442:24698-24717 | None:intergenic | 50.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | + | tig0018442:23808-23827 | Msa1365900:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | tig0018442:23843-23862 | Msa1365900:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | tig0018442:23844-23863 | Msa1365900:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | - | tig0018442:23864-23883 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | tig0018442:23984-24003 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | tig0018442:23985-24004 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | tig0018442:24010-24029 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | tig0018442:24440-24459 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | tig0018442:24698-24717 | None:intergenic | 50.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | + | tig0018442:23845-23864 | Msa1365900:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | tig0018442:23981-24000 | Msa1365900:CDS | 55.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | + | tig0018442:23845-23864 | Msa1365900:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | tig0018442:23981-24000 | Msa1365900:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018442 | gene | 23617 | 25129 | 23617 | ID=Msa1365900;Name=Msa1365900 |
| tig0018442 | mRNA | 23617 | 25129 | 23617 | ID=Msa1365900-mRNA-1;Parent=Msa1365900;Name=Msa1365900-mRNA-1;_AED=0.74;_eAED=1.00;_QI=0|0|0|0.5|1|1|2|0|281 |
| tig0018442 | exon | 23617 | 24012 | 23617 | ID=Msa1365900-mRNA-1:exon:14878;Parent=Msa1365900-mRNA-1 |
| tig0018442 | exon | 24680 | 25129 | 24680 | ID=Msa1365900-mRNA-1:exon:14879;Parent=Msa1365900-mRNA-1 |
| tig0018442 | CDS | 23617 | 24012 | 23617 | ID=Msa1365900-mRNA-1:cds;Parent=Msa1365900-mRNA-1 |
| tig0018442 | CDS | 24680 | 25129 | 24680 | ID=Msa1365900-mRNA-1:cds;Parent=Msa1365900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
