Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908380 | QJQ79495.1 | 84.043 | 282 | 4 | 2 | 1 | 241 | 106 | 387 | 1.15e-144 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908380 | sp|P0CC61|NU2C2_EUCGG | 81.588 | 277 | 8 | 2 | 1 | 241 | 124 | 393 | 1.22e-136 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095150 | Msa0908380 | 0.846765 | 1.768535e-59 | -8.615850e-47 |
| Msa0095170 | Msa0908380 | 0.804652 | 1.949154e-49 | -8.615850e-47 |
| Msa0095190 | Msa0908380 | 0.815673 | 8.195972e-52 | -8.615850e-47 |
| Msa0095210 | Msa0908380 | 0.800081 | 1.703414e-48 | -8.615850e-47 |
| Msa0095230 | Msa0908380 | 0.823393 | 1.419146e-53 | -8.615850e-47 |
| Msa0095280 | Msa0908380 | 0.802777 | 4.775560e-49 | -8.615850e-47 |
| Msa0611450 | Msa0908380 | 0.804872 | 1.753621e-49 | -8.615850e-47 |
| Msa0694170 | Msa0908380 | 0.803817 | 2.908185e-49 | -8.615850e-47 |
| Msa0707870 | Msa0908380 | 0.801797 | 7.599249e-49 | -8.615850e-47 |
| Msa0173880 | Msa0908380 | 0.802728 | 4.888836e-49 | -8.615850e-47 |
| Msa0202640 | Msa0908380 | 0.835337 | 1.779299e-56 | -8.615850e-47 |
| Msa0221840 | Msa0908380 | 0.821754 | 3.413107e-53 | -8.615850e-47 |
| Msa0370210 | Msa0908380 | 0.827349 | 1.643572e-54 | -8.615850e-47 |
| Msa0405420 | Msa0908380 | 0.836294 | 1.018064e-56 | -8.615850e-47 |
| Msa0405430 | Msa0908380 | 0.803966 | 2.708762e-49 | -8.615850e-47 |
| Msa0405440 | Msa0908380 | 0.830078 | 3.595321e-55 | -8.615850e-47 |
| Msa0405510 | Msa0908380 | 0.844800 | 6.041194e-59 | -8.615850e-47 |
| Msa0405520 | Msa0908380 | 0.803823 | 2.900897e-49 | -8.615850e-47 |
| Msa0405530 | Msa0908380 | 0.835577 | 1.547166e-56 | -8.615850e-47 |
| Msa0449920 | Msa0908380 | 0.822155 | 2.756276e-53 | -8.615850e-47 |
| Msa0263770 | Msa0908380 | 0.802973 | 4.350350e-49 | -8.615850e-47 |
| Msa0268170 | Msa0908380 | 0.819268 | 1.270018e-52 | -8.615850e-47 |
| Msa0268190 | Msa0908380 | 0.830790 | 2.408591e-55 | -8.615850e-47 |
| Msa0268210 | Msa0908380 | 0.810129 | 1.343975e-50 | -8.615850e-47 |
| Msa0268250 | Msa0908380 | 0.887875 | 9.711782e-73 | -8.615850e-47 |
| Msa0268260 | Msa0908380 | 0.821638 | 3.629666e-53 | -8.615850e-47 |
| Msa0268270 | Msa0908380 | 0.833398 | 5.456774e-56 | -8.615850e-47 |
| Msa0268300 | Msa0908380 | 0.854175 | 1.466279e-61 | -8.615850e-47 |
| Msa0268310 | Msa0908380 | 0.837790 | 4.223103e-57 | -8.615850e-47 |
| Msa0268350 | Msa0908380 | 0.814104 | 1.826378e-51 | -8.615850e-47 |
| Msa0268370 | Msa0908380 | 0.801092 | 1.059673e-48 | -8.615850e-47 |
| Msa0268400 | Msa0908380 | 0.815264 | 1.010810e-51 | -8.615850e-47 |
| Msa0268410 | Msa0908380 | 0.817079 | 3.970689e-52 | -8.615850e-47 |
| Msa0268430 | Msa0908380 | 0.819752 | 9.849753e-53 | -8.615850e-47 |
| Msa0268450 | Msa0908380 | 0.810717 | 1.003454e-50 | -8.615850e-47 |
| Msa0268530 | Msa0908380 | 0.805257 | 1.456650e-49 | -8.615850e-47 |
| Msa0268550 | Msa0908380 | 0.813233 | 2.839781e-51 | -8.615850e-47 |
| Msa0268560 | Msa0908380 | 0.802936 | 4.428424e-49 | -8.615850e-47 |
| Msa0268570 | Msa0908380 | 0.830383 | 3.029345e-55 | -8.615850e-47 |
| Msa0268630 | Msa0908380 | 0.815855 | 7.463797e-52 | -8.615850e-47 |
| Msa0268660 | Msa0908380 | 0.804265 | 2.346567e-49 | -8.615850e-47 |
| Msa0268670 | Msa0908380 | 0.824179 | 9.283831e-54 | -8.615850e-47 |
| Msa0268720 | Msa0908380 | 0.801023 | 1.094928e-48 | -8.615850e-47 |
| Msa0268740 | Msa0908380 | 0.817628 | 2.987912e-52 | -8.615850e-47 |
| Msa0268750 | Msa0908380 | 0.844026 | 9.756050e-59 | -8.615850e-47 |
| Msa0268830 | Msa0908380 | 0.834302 | 3.241525e-56 | -8.615850e-47 |
| Msa0268840 | Msa0908380 | 0.806762 | 7.026017e-50 | -8.615850e-47 |
| Msa0268860 | Msa0908380 | 0.821989 | 3.010915e-53 | -8.615850e-47 |
| Msa0268880 | Msa0908380 | 0.817940 | 2.540670e-52 | -8.615850e-47 |
| Msa0268920 | Msa0908380 | 0.803920 | 2.768908e-49 | -8.615850e-47 |
| Msa0268940 | Msa0908380 | 0.807240 | 5.567245e-50 | -8.615850e-47 |
| Msa0268950 | Msa0908380 | 0.810604 | 1.061278e-50 | -8.615850e-47 |
| Msa0268960 | Msa0908380 | 0.843633 | 1.242539e-58 | -8.615850e-47 |
| Msa0269040 | Msa0908380 | 0.835950 | 1.245242e-56 | -8.615850e-47 |
| Msa0269050 | Msa0908380 | 0.812533 | 4.041907e-51 | -8.615850e-47 |
| Msa0269070 | Msa0908380 | 0.828572 | 8.346572e-55 | -8.615850e-47 |
| Msa0269090 | Msa0908380 | 0.817487 | 3.214210e-52 | -8.615850e-47 |
| Msa0269130 | Msa0908380 | 0.881426 | 2.425260e-70 | -8.615850e-47 |
| Msa0269140 | Msa0908380 | 0.833266 | 5.886894e-56 | -8.615850e-47 |
| Msa0269150 | Msa0908380 | 0.841085 | 5.885121e-58 | -8.615850e-47 |
| Msa0344190 | Msa0908380 | 0.824473 | 7.919726e-54 | -8.615850e-47 |
| Msa0344210 | Msa0908380 | 0.814582 | 1.431305e-51 | -8.615850e-47 |
| Msa0344260 | Msa0908380 | 0.809575 | 1.767950e-50 | -8.615850e-47 |
| Msa0344280 | Msa0908380 | 0.816022 | 6.849910e-52 | -8.615850e-47 |
| Msa0344310 | Msa0908380 | 0.826013 | 3.423299e-54 | -8.615850e-47 |
| Msa0484040 | Msa0908380 | 0.809746 | 1.624727e-50 | -8.615850e-47 |
| Msa0582510 | Msa0908380 | 0.828299 | 9.710933e-55 | -8.615850e-47 |
| Msa0582520 | Msa0908380 | 0.807634 | 4.591817e-50 | -8.615850e-47 |
| Msa0582540 | Msa0908380 | 0.811728 | 6.054833e-51 | -8.615850e-47 |
| Msa0582560 | Msa0908380 | 0.818851 | 1.579742e-52 | -8.615850e-47 |
| Msa0582590 | Msa0908380 | 0.815355 | 9.647855e-52 | -8.615850e-47 |
| Msa0582610 | Msa0908380 | 0.811843 | 5.716073e-51 | -8.615850e-47 |
| Msa0582630 | Msa0908380 | 0.808548 | 2.933730e-50 | -8.615850e-47 |
| Msa0582640 | Msa0908380 | 0.819080 | 1.401166e-52 | -8.615850e-47 |
| Msa0582650 | Msa0908380 | 0.824592 | 7.427081e-54 | -8.615850e-47 |
| Msa0582690 | Msa0908380 | 0.832391 | 9.709380e-56 | -8.615850e-47 |
| Msa0582700 | Msa0908380 | 0.811840 | 5.725047e-51 | -8.615850e-47 |
| Msa0582720 | Msa0908380 | 0.804772 | 1.840353e-49 | -8.615850e-47 |
| Msa0582730 | Msa0908380 | 0.803987 | 2.681025e-49 | -8.615850e-47 |
| Msa0582760 | Msa0908380 | 0.827132 | 1.852611e-54 | -8.615850e-47 |
| Msa0582770 | Msa0908380 | 0.836806 | 7.538818e-57 | -8.615850e-47 |
| Msa0582810 | Msa0908380 | 0.840382 | 8.990712e-58 | -8.615850e-47 |
| Msa0582820 | Msa0908380 | 0.804825 | 1.793444e-49 | -8.615850e-47 |
| Msa0582840 | Msa0908380 | 0.809494 | 1.840135e-50 | -8.615850e-47 |
| Msa0582860 | Msa0908380 | 0.802750 | 4.838170e-49 | -8.615850e-47 |
| Msa0582870 | Msa0908380 | 0.820611 | 6.258733e-53 | -8.615850e-47 |
| Msa0582890 | Msa0908380 | 0.806330 | 8.668002e-50 | -8.615850e-47 |
| Msa0582910 | Msa0908380 | 0.811195 | 7.905193e-51 | -8.615850e-47 |
| Msa0582920 | Msa0908380 | 0.834502 | 2.888687e-56 | -8.615850e-47 |
| Msa0591310 | Msa0908380 | 0.871550 | 6.273482e-67 | -8.615850e-47 |
| Msa0591350 | Msa0908380 | 0.848853 | 4.703614e-60 | -8.615850e-47 |
| Msa0591360 | Msa0908380 | 0.859544 | 3.842930e-63 | -8.615850e-47 |
| Msa0591380 | Msa0908380 | 0.826359 | 2.832889e-54 | -8.615850e-47 |
| Msa0844260 | Msa0908380 | 0.800880 | 1.170791e-48 | -8.615850e-47 |
| Msa0867680 | Msa0908380 | 0.830764 | 2.443496e-55 | -8.615850e-47 |
| Msa0867690 | Msa0908380 | 0.870777 | 1.129456e-66 | -8.615850e-47 |
| Msa0908220 | Msa0908380 | 0.878793 | 2.106464e-69 | -8.615850e-47 |
| Msa0908230 | Msa0908380 | 0.830968 | 2.178217e-55 | -8.615850e-47 |
| Msa0908240 | Msa0908380 | 0.836843 | 7.377145e-57 | -8.615850e-47 |
| Msa0908310 | Msa0908380 | 0.861610 | 9.090711e-64 | -8.615850e-47 |
| Msa0908320 | Msa0908380 | 0.921700 | 2.553880e-88 | -8.615850e-47 |
| Msa0908370 | Msa0908380 | 0.848270 | 6.821736e-60 | -8.615850e-47 |
| Msa0908380 | Msa0908430 | 0.888014 | 8.593807e-73 | -8.615850e-47 |
| Msa0908380 | Msa0908440 | 0.833825 | 4.269276e-56 | -8.615850e-47 |
| Msa0908380 | Msa0908450 | 0.844642 | 6.663065e-59 | -8.615850e-47 |
| Msa0908380 | Msa0908480 | 0.823915 | 1.070910e-53 | -8.615850e-47 |
| Msa0908380 | Msa0908530 | 0.851453 | 8.787978e-61 | -8.615850e-47 |
| Msa0908380 | Msa0908540 | 0.917059 | 8.411790e-86 | -8.615850e-47 |
| Msa0908380 | Msa0908590 | 0.860141 | 2.539606e-63 | -8.615850e-47 |
| Msa0908380 | Msa0908600 | 0.830991 | 2.149598e-55 | -8.615850e-47 |
| Msa0908380 | Msa0908610 | 0.837497 | 5.020296e-57 | -8.615850e-47 |
| Msa0908380 | Msa0908650 | 0.883637 | 3.791748e-71 | -8.615850e-47 |
| Msa0908380 | Msa0908660 | 0.829124 | 6.135809e-55 | -8.615850e-47 |
| Msa0908380 | Msa0908670 | 0.852412 | 4.694251e-61 | -8.615850e-47 |
| Msa0908380 | Msa0908720 | 0.832323 | 1.009207e-55 | -8.615850e-47 |
| Msa0908380 | Msa0908730 | 0.900813 | 5.029661e-78 | -8.615850e-47 |
| Msa0908380 | Msa0911190 | 0.803175 | 3.952279e-49 | -8.615850e-47 |
| Msa0908380 | Msa0911200 | 0.847680 | 9.924412e-60 | -8.615850e-47 |
| Msa0908380 | Msa0911230 | 0.815201 | 1.043491e-51 | -8.615850e-47 |
| Msa0908380 | Msa0924830 | 0.837035 | 6.591285e-57 | -8.615850e-47 |
| Msa0908380 | Msa0924850 | 0.800944 | 1.136099e-48 | -8.615850e-47 |
| Msa0908380 | Msa0924870 | 0.812943 | 3.287648e-51 | -8.615850e-47 |
| Msa0908380 | Msa0924880 | 0.821900 | 3.156917e-53 | -8.615850e-47 |
| Msa0908380 | Msa0924930 | 0.824637 | 7.245541e-54 | -8.615850e-47 |
| Msa0908380 | Msa0924940 | 0.874865 | 4.833607e-68 | -8.615850e-47 |
| Msa0908380 | Msa0924990 | 0.804441 | 2.156819e-49 | -8.615850e-47 |
| Msa0908380 | Msa0925040 | 0.813163 | 2.941485e-51 | -8.615850e-47 |
| Msa0908380 | Msa0925100 | 0.823106 | 1.655592e-53 | -8.615850e-47 |
| Msa0908380 | Msa0925110 | 0.855016 | 8.368404e-62 | -8.615850e-47 |
| Msa0908380 | Msa0931070 | 0.814160 | 1.774371e-51 | -8.615850e-47 |
| Msa0908380 | Msa0931080 | 0.805453 | 1.325067e-49 | -8.615850e-47 |
| Msa0908380 | Msa0931110 | 0.812260 | 4.636490e-51 | -8.615850e-47 |
| Msa0908380 | Msa0931130 | 0.824141 | 9.478004e-54 | -8.615850e-47 |
| Msa0908380 | Msa0931160 | 0.815440 | 9.236819e-52 | -8.615850e-47 |
| Msa0908380 | Msa0931220 | 0.822670 | 2.092308e-53 | -8.615850e-47 |
| Msa0908380 | Msa0931230 | 0.831087 | 2.036488e-55 | -8.615850e-47 |
| Msa0908380 | Msa0931260 | 0.837877 | 4.010819e-57 | -8.615850e-47 |
| Msa0908380 | Msa0931270 | 0.802654 | 5.062784e-49 | -8.615850e-47 |
| Msa0908380 | Msa0983630 | 0.831851 | 1.320727e-55 | -8.615850e-47 |
| Msa0908380 | Msa0983640 | 0.837173 | 6.077426e-57 | -8.615850e-47 |
| Msa0908380 | Msa0983680 | 0.823589 | 1.276717e-53 | -8.615850e-47 |
| Msa0908380 | Msa1022050 | 0.834734 | 2.524931e-56 | -8.615850e-47 |
| Msa0908380 | Msa1022060 | 0.882042 | 1.451408e-70 | -8.615850e-47 |
| Msa0908380 | Msa1064410 | 0.815539 | 8.778377e-52 | -8.615850e-47 |
| Msa0908380 | Msa1086050 | 0.807570 | 4.739527e-50 | -8.615850e-47 |
| Msa0908380 | Msa1086070 | 0.802920 | 4.462735e-49 | -8.615850e-47 |
| Msa0908380 | Msa1086080 | 0.830734 | 2.485745e-55 | -8.615850e-47 |
| Msa0908380 | Msa1086090 | 0.826919 | 2.083150e-54 | -8.615850e-47 |
| Msa0908380 | Msa1086140 | 0.818883 | 1.553133e-52 | -8.615850e-47 |
| Msa0908380 | Msa1086150 | 0.811293 | 7.525936e-51 | -8.615850e-47 |
| Msa0908380 | Msa1086180 | 0.817544 | 3.120775e-52 | -8.615850e-47 |
| Msa0908380 | Msa1086190 | 0.818768 | 1.649506e-52 | -8.615850e-47 |
| Msa0908380 | Msa1086200 | 0.841797 | 3.821065e-58 | -8.615850e-47 |
| Msa0908380 | Msa1086270 | 0.822321 | 2.521828e-53 | -8.615850e-47 |
| Msa0908380 | Msa1086280 | 0.818026 | 2.429322e-52 | -8.615850e-47 |
| Msa0908380 | Msa1086300 | 0.823939 | 1.057372e-53 | -8.615850e-47 |
| Msa0908380 | Msa1086320 | 0.811925 | 5.484313e-51 | -8.615850e-47 |
| Msa0908380 | Msa1086360 | 0.804963 | 1.678530e-49 | -8.615850e-47 |
| Msa0908380 | Msa1086380 | 0.811369 | 7.247016e-51 | -8.615850e-47 |
| Msa0908380 | Msa1086420 | 0.813874 | 2.051904e-51 | -8.615850e-47 |
| Msa0908380 | Msa1086430 | 0.800171 | 1.633057e-48 | -8.615850e-47 |
| Msa0908380 | Msa1086450 | 0.804124 | 2.511200e-49 | -8.615850e-47 |
| Msa0908380 | Msa1086470 | 0.806290 | 8.838651e-50 | -8.615850e-47 |
| Msa0908380 | Msa1086510 | 0.815463 | 9.128923e-52 | -8.615850e-47 |
| Msa0908380 | Msa1086550 | 0.869408 | 3.165506e-66 | -8.615850e-47 |
| Msa0908380 | Msa1086600 | 0.885726 | 6.339463e-72 | -8.615850e-47 |
| Msa0908380 | Msa1086660 | 0.811847 | 5.703341e-51 | -8.615850e-47 |
| Msa0908380 | Msa1086670 | 0.801812 | 7.546338e-49 | -8.615850e-47 |
| Msa0908380 | Msa1086680 | 0.805410 | 1.352869e-49 | -8.615850e-47 |
| Msa0908380 | Msa1086720 | 0.863792 | 1.933227e-64 | -8.615850e-47 |
| Msa0908380 | Msa1086730 | 0.823829 | 1.122015e-53 | -8.615850e-47 |
| Msa0908380 | Msa1086740 | 0.836685 | 8.096274e-57 | -8.615850e-47 |
| Msa0908380 | Msa1086790 | 0.835248 | 1.873642e-56 | -8.615850e-47 |
| Msa0908380 | Msa1086800 | 0.864829 | 9.176152e-65 | -8.615850e-47 |
| Msa0908380 | Msa1086860 | 0.814301 | 1.651548e-51 | -8.615850e-47 |
| Msa0908380 | Msa1086880 | 0.808899 | 2.468921e-50 | -8.615850e-47 |
| Msa0908380 | Msa1086890 | 0.837823 | 4.141115e-57 | -8.615850e-47 |
| Msa0908380 | Msa1086900 | 0.849317 | 3.495586e-60 | -8.615850e-47 |
| Msa0908380 | Msa1086960 | 0.849847 | 2.485694e-60 | -8.615850e-47 |
| Msa0908380 | Msa1086970 | 0.862545 | 4.697967e-64 | -8.615850e-47 |
| Msa0908380 | Msa1087030 | 0.875577 | 2.761945e-68 | -8.615850e-47 |
| Msa0908380 | Msa1087040 | 0.828077 | 1.098522e-54 | -8.615850e-47 |
| Msa0908380 | Msa1087050 | 0.825511 | 4.503335e-54 | -8.615850e-47 |
| Msa0908380 | Msa1087110 | 0.834274 | 3.296097e-56 | -8.615850e-47 |
| Msa0908380 | Msa1087120 | 0.864222 | 1.419866e-64 | -8.615850e-47 |
| Msa0908380 | Msa1091700 | 0.811142 | 8.117081e-51 | -8.615850e-47 |
| Msa0908380 | Msa1143120 | 0.821217 | 4.540942e-53 | -8.615850e-47 |
| Msa0908380 | Msa1143130 | 0.800752 | 1.243588e-48 | -8.615850e-47 |
| Msa0908380 | Msa1143160 | 0.811014 | 8.652348e-51 | -8.615850e-47 |
| Msa0908380 | Msa1143170 | 0.837191 | 6.010844e-57 | -8.615850e-47 |
| Msa0908380 | Msa1305090 | 0.823394 | 1.418392e-53 | -8.615850e-47 |
| Msa0908380 | Msa1342040 | 0.800003 | 1.766580e-48 | -8.615850e-47 |
| Msa0908380 | Msa1354420 | 0.826449 | 2.696377e-54 | -8.615850e-47 |
| Msa0908380 | Msa1354430 | 0.889870 | 1.643892e-73 | -8.615850e-47 |
| Msa0908380 | Msa1354480 | 0.852683 | 3.930585e-61 | -8.615850e-47 |
| Msa0908380 | Msa1354490 | 0.822851 | 1.898284e-53 | -8.615850e-47 |
| Msa0908380 | Msa1354500 | 0.834337 | 3.178262e-56 | -8.615850e-47 |
| Msa0908380 | Msa1354550 | 0.840246 | 9.762889e-58 | -8.615850e-47 |
| Msa0908380 | Msa1354560 | 0.885731 | 6.315073e-72 | -8.615850e-47 |
| Msa0908380 | Msa1354610 | 0.871828 | 5.073590e-67 | -8.615850e-47 |
| Msa0908380 | Msa1354620 | 0.839239 | 1.784142e-57 | -8.615850e-47 |
| Msa0908380 | Msa1354630 | 0.852074 | 5.859546e-61 | -8.615850e-47 |
| Msa0908380 | Msa1354680 | 0.824747 | 6.825136e-54 | -8.615850e-47 |
| Msa0908380 | Msa1354700 | 0.875965 | 2.032505e-68 | -8.615850e-47 |
| Msa0908380 | Msa1354740 | 0.867548 | 1.262133e-65 | -8.615850e-47 |
| Msa0908380 | Msa1354750 | 0.845669 | 3.516479e-59 | -8.615850e-47 |
| Msa0908380 | Msa1354760 | 0.837407 | 5.294007e-57 | -8.615850e-47 |
| Msa0908380 | Msa1354810 | 0.849492 | 3.124119e-60 | -8.615850e-47 |
| Msa0908380 | Msa1354820 | 0.873394 | 1.521533e-67 | -8.615850e-47 |
| Msa0908380 | Msa1354860 | 0.819483 | 1.134155e-52 | -8.615850e-47 |
| Msa0908380 | Msa1354900 | 0.806979 | 6.322453e-50 | -8.615850e-47 |
| Msa0908380 | Msa1354910 | 0.805257 | 1.456477e-49 | -8.615850e-47 |
| Msa0908380 | Msa1354920 | 0.837489 | 5.043635e-57 | -8.615850e-47 |
| Msa0908380 | Msa1354930 | 0.800159 | 1.642834e-48 | -8.615850e-47 |
| Msa0908380 | Msa1354980 | 0.840460 | 8.583157e-58 | -8.615850e-47 |
| Msa0908380 | Msa1354990 | 0.889045 | 3.442547e-73 | -8.615850e-47 |
| Msa0908380 | Msa1355030 | 0.804638 | 1.962642e-49 | -8.615850e-47 |
| Msa0908380 | Msa1355080 | 0.827261 | 1.724891e-54 | -8.615850e-47 |
| Msa0908380 | Msa1355090 | 0.817738 | 2.821834e-52 | -8.615850e-47 |
| Msa0908380 | Msa1355100 | 0.804353 | 2.249858e-49 | -8.615850e-47 |
| Msa0908380 | Msa1365890 | 0.839633 | 1.410362e-57 | -8.615850e-47 |
| Msa0908380 | Msa1365900 | 0.855585 | 5.714800e-62 | -8.615850e-47 |
| Msa0908380 | Msa1365950 | 0.859665 | 3.533946e-63 | -8.615850e-47 |
| Msa0908380 | Msa1365960 | 0.801127 | 1.042639e-48 | -8.615850e-47 |
| Msa0908380 | Msa1365970 | 0.842493 | 2.500191e-58 | -8.615850e-47 |
| Msa0908380 | Msa1366080 | 0.850322 | 1.829672e-60 | -8.615850e-47 |
| Msa0908380 | Msa1366090 | 0.866473 | 2.779960e-65 | -8.615850e-47 |
| Msa0908380 | Msa1368230 | 0.821497 | 3.913624e-53 | -8.615850e-47 |
| Msa0908380 | Msa1368240 | 0.833611 | 4.828884e-56 | -8.615850e-47 |
| Msa0908380 | Msa1380570 | 0.804495 | 2.102031e-49 | -8.615850e-47 |
| Msa0908380 | Msa1380590 | 0.802915 | 4.472255e-49 | -8.615850e-47 |
| Msa0908380 | Msa1380600 | 0.803230 | 3.849848e-49 | -8.615850e-47 |
| Msa0908380 | Msa1380610 | 0.833766 | 4.416294e-56 | -8.615850e-47 |
| Msa0908380 | Msa1380620 | 0.818596 | 1.804778e-52 | -8.615850e-47 |
| Msa0908380 | Msa1385410 | 0.820240 | 7.613857e-53 | -8.615850e-47 |
| Msa0908380 | Msa1385420 | 0.843172 | 1.649932e-58 | -8.615850e-47 |
| Msa0908380 | Msa1391090 | 0.841315 | 5.119037e-58 | -8.615850e-47 |
| Msa0908380 | Msa1391100 | 0.819347 | 1.217965e-52 | -8.615850e-47 |
| Msa0908380 | Msa1391110 | 0.845194 | 4.728979e-59 | -8.615850e-47 |
| Msa0908380 | Msa1391160 | 0.817492 | 3.205730e-52 | -8.615850e-47 |
| Msa0908380 | Msa1391170 | 0.860857 | 1.541877e-63 | -8.615850e-47 |
| Msa0908380 | Msa1391220 | 0.863989 | 1.678130e-64 | -8.615850e-47 |
| Msa0908380 | Msa1391230 | 0.806784 | 6.953888e-50 | -8.615850e-47 |
| Msa0908380 | Msa1391240 | 0.847271 | 1.285360e-59 | -8.615850e-47 |
| Msa0908380 | Msa1394030 | 0.846759 | 1.775507e-59 | -8.615850e-47 |
| Msa0908380 | Msa1394040 | 0.824057 | 9.920730e-54 | -8.615850e-47 |
| Msa0908380 | Msa1394080 | 0.814091 | 1.837915e-51 | -8.615850e-47 |
| Msa0908380 | Msa1394110 | 0.802500 | 5.448267e-49 | -8.615850e-47 |
| Msa0908380 | Msa1394130 | 0.805123 | 1.553655e-49 | -8.615850e-47 |
| Msa0908380 | Msa1394150 | 0.814166 | 1.768872e-51 | -8.615850e-47 |
| Msa0908380 | Msa1394160 | 0.817304 | 3.535472e-52 | -8.615850e-47 |
| Msa0908380 | Msa1394210 | 0.823704 | 1.200030e-53 | -8.615850e-47 |
| Msa0908380 | Msa1394220 | 0.806166 | 9.385971e-50 | -8.615850e-47 |
| Msa0908380 | Msa1394230 | 0.801239 | 9.887614e-49 | -8.615850e-47 |
| Msa0908380 | Msa1394250 | 0.831199 | 1.911393e-55 | -8.615850e-47 |
| Msa0908380 | Msa1394270 | 0.833114 | 6.424191e-56 | -8.615850e-47 |
| Msa0908380 | Msa1460120 | 0.808806 | 2.583844e-50 | -8.615850e-47 |
| Msa0908380 | Msa1460130 | 0.828398 | 9.190975e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908380 | MtrunA17_Chr1g0195541 | 72.727 | 132 | 0 | 1 | 1 | 96 | 1 | 132 | 2.77e-57 | 180 |
| Msa0908380 | MtrunA17_CPg0492431 | 72.727 | 132 | 0 | 1 | 1 | 96 | 106 | 237 | 8.76e-56 | 180 |
| Msa0908380 | MtrunA17_Chr3g0090851 | 72.727 | 132 | 0 | 1 | 1 | 96 | 106 | 237 | 8.76e-56 | 180 |
| Msa0908380 | MtrunA17_Chr4g0016091 | 72.727 | 132 | 0 | 1 | 1 | 96 | 106 | 237 | 8.76e-56 | 180 |
| Msa0908380 | MtrunA17_Chr3g0090871 | 98.851 | 87 | 1 | 0 | 155 | 241 | 1 | 87 | 4.26e-55 | 175 |
| Msa0908380 | MtrunA17_CPg0492451 | 98.851 | 87 | 1 | 0 | 155 | 241 | 1 | 87 | 3.84e-54 | 173 |
| Msa0908380 | MtrunA17_Chr4g0016071 | 98.851 | 87 | 1 | 0 | 155 | 241 | 1 | 87 | 3.84e-54 | 173 |
| Msa0908380 | MtrunA17_Chr0c03g0489881 | 34.459 | 148 | 86 | 4 | 93 | 240 | 2 | 138 | 1.70e-13 | 67.4 |
| Msa0908380 | MtrunA17_MTg0491931 | 34.459 | 148 | 86 | 4 | 93 | 240 | 2 | 138 | 1.70e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908380 | ATCG00890.1 | 80.505 | 277 | 11 | 2 | 1 | 241 | 1 | 270 | 2.33e-138 | 394 |
| Msa0908380 | ATCG01250.1 | 80.505 | 277 | 11 | 2 | 1 | 241 | 1 | 270 | 2.33e-138 | 394 |
| Msa0908380 | AT2G07689.1 | 34.459 | 148 | 86 | 4 | 93 | 240 | 2 | 138 | 8.38e-13 | 65.9 |
Find 49 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGATATGTAATTAT+TGG | 0.189063 | 6_2:+9563082 | Msa0908380:CDS |
| CATGGTTTCTCTTGGCTATA+TGG | 0.197078 | 6_2:+9561991 | Msa0908380:CDS |
| TGGGGCAAGCTCTTCTATTC+TGG | 0.197255 | 6_2:+9561966 | Msa0908380:CDS |
| GCTATTCTTAGCATGCTATT+AGG | 0.213688 | 6_2:+9562998 | Msa0908380:CDS |
| TTTGCTTGCATTGTGTTATT+TGG | 0.223841 | 6_2:+9563187 | Msa0908380:CDS |
| ATTAGACCGTACATCTTTCT+TGG | 0.278852 | 6_2:-9561914 | None:intergenic |
| TCGTTTGATGAGAAATAAAA+AGG | 0.282633 | 6_2:-9562950 | None:intergenic |
| AGCTCTTCTATTCTGGTTCA+TGG | 0.287942 | 6_2:+9561973 | Msa0908380:CDS |
| CTATTCTTAGCATGCTATTA+GGG | 0.301257 | 6_2:+9562999 | Msa0908380:CDS |
| TATTCGTCCATAGGTCAAAT+TGG | 0.303171 | 6_2:+9563067 | Msa0908380:CDS |
| GCATACGTTTCATGCTTGTT+TGG | 0.326865 | 6_2:-9563039 | None:intergenic |
| TTCTGGTTCATGGTTTCTCT+TGG | 0.336946 | 6_2:+9561983 | Msa0908380:CDS |
| GGCTAAAGAGAGAGCCAAAA+AGG | 0.344421 | 6_2:-9563265 | None:intergenic |
| TTATGCTCCTATCTACTATC+TGG | 0.367530 | 6_2:+9561886 | Msa0908380:CDS |
| CATACGTTTCATGCTTGTTT+GGG | 0.369828 | 6_2:-9563038 | None:intergenic |
| GTAATTATTGGAATAATTGT+TGG | 0.373428 | 6_2:+9563094 | Msa0908380:CDS |
| CCCTAGCCCCTTCTCATCAA+TGG | 0.393307 | 6_2:+9562138 | Msa0908380:CDS |
| GTGTTATTTGGTCTACGTAC+TGG | 0.413420 | 6_2:+9563199 | Msa0908380:CDS |
| TATTCATCACTGTAGGAATT+GGG | 0.417349 | 6_2:+9562105 | Msa0908380:intron |
| TACATATCCAATTTGACCTA+TGG | 0.420081 | 6_2:-9563074 | None:intergenic |
| AGCAAAAGTTCCTAGATTCA+TGG | 0.448640 | 6_2:-9563170 | None:intergenic |
| TTCTATATCTCCATGAATCT+AGG | 0.460861 | 6_2:+9563160 | Msa0908380:CDS |
| TACTATGAAATATTTACTCA+TGG | 0.474204 | 6_2:+9561942 | Msa0908380:CDS |
| GGTATATCCAGATAGTAGAT+AGG | 0.488329 | 6_2:-9561893 | None:intergenic |
| TGAAATATTTACTCATGGGT+GGG | 0.506663 | 6_2:+9561947 | Msa0908380:CDS |
| TCCATTGATGAGAAGGGGCT+AGG | 0.510524 | 6_2:-9562139 | None:intergenic |
| ATGCTTGCTTATTCGTCCAT+AGG | 0.517225 | 6_2:+9563058 | Msa0908380:CDS |
| TTTATTTCTCATCAAACGAA+TGG | 0.522523 | 6_2:+9562954 | Msa0908380:CDS |
| GATAACATTCGAGATTATGC+AGG | 0.531827 | 6_2:+9563226 | Msa0908380:CDS |
| ATGAAATATTTACTCATGGG+TGG | 0.533610 | 6_2:+9561946 | Msa0908380:CDS |
| GAAATATTTACTCATGGGTG+GGG | 0.537789 | 6_2:+9561948 | Msa0908380:CDS |
| CAGGAGTCCATTGATGAGAA+GGG | 0.542754 | 6_2:-9562145 | None:intergenic |
| ATAATTGTTGGAGACTCAAA+TGG | 0.548093 | 6_2:+9563106 | Msa0908380:CDS |
| TCAGGAGTCCATTGATGAGA+AGG | 0.551074 | 6_2:-9562146 | None:intergenic |
| AGAAAAGCAACGACTGGAGT+CGG | 0.551106 | 6_2:-9562872 | None:intergenic |
| CCATTGATGAGAAGGGGCTA+GGG | 0.552174 | 6_2:-9562138 | None:intergenic |
| TTCATATTAACCGCTACTCT+AGG | 0.552712 | 6_2:+9561799 | Msa0908380:CDS |
| GAAAGATGTACGGTCTAATG+AGG | 0.565206 | 6_2:+9561918 | Msa0908380:CDS |
| GGAGAGTCAGAGTCGAAAAG+AGG | 0.572366 | 6_2:-9562851 | None:intergenic |
| ATAGCATGCTAAGAATAGCT+AGG | 0.576533 | 6_2:-9562994 | None:intergenic |
| ACAGAAAGAAAAGCAACGAC+TGG | 0.577795 | 6_2:-9562878 | None:intergenic |
| ACTATGAAATATTTACTCAT+GGG | 0.584827 | 6_2:+9561943 | Msa0908380:CDS |
| TTGAATGAGAGAAAGAAGTG+AGG | 0.599130 | 6_2:+9562825 | Msa0908380:intron |
| ATATTAACCGCTACTCTAGG+AGG | 0.609728 | 6_2:+9561802 | Msa0908380:CDS |
| GATATACCAAGAAAGATGTA+CGG | 0.625842 | 6_2:+9561908 | Msa0908380:CDS |
| ATTGTTGGAGACTCAAATGG+TGG | 0.626325 | 6_2:+9563109 | Msa0908380:CDS |
| AGGAGTCCATTGATGAGAAG+GGG | 0.632944 | 6_2:-9562144 | None:intergenic |
| AGGAATATCGAAAATTCGAG+TGG | 0.650147 | 6_2:-9562930 | None:intergenic |
| AAACATTCCTCCTAGAGTAG+CGG | 0.663526 | 6_2:-9561809 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | chr6_2:9562302-9562321 | Msa0908380:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | chr6_2:9562615-9562634 | Msa0908380:intron | 15.0% |
| !!! | ACTTGTTAAAATAACAATTA+AGG | + | chr6_2:9562302-9562321 | Msa0908380:intron | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | + | chr6_2:9562615-9562634 | Msa0908380:intron | 15.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | chr6_2:9561942-9561961 | Msa0908380:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | chr6_2:9561943-9561962 | Msa0908380:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | chr6_2:9562371-9562390 | Msa0908380:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | chr6_2:9562692-9562711 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | chr6_2:9562692-9562711 | Msa0908380:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | chr6_2:9563082-9563101 | Msa0908380:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | chr6_2:9563094-9563113 | Msa0908380:CDS | 20.0% |
| !! | TACTATGAAATATTTACTCA+TGG | + | chr6_2:9561942-9561961 | Msa0908380:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | + | chr6_2:9561943-9561962 | Msa0908380:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | + | chr6_2:9562371-9562390 | Msa0908380:intron | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | - | chr6_2:9562692-9562711 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | + | chr6_2:9562692-9562711 | Msa0908380:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | + | chr6_2:9563082-9563101 | Msa0908380:CDS | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | + | chr6_2:9563094-9563113 | Msa0908380:CDS | 20.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | chr6_2:9562231-9562250 | Msa0908380:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | chr6_2:9562290-9562309 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | chr6_2:9562372-9562391 | Msa0908380:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | chr6_2:9562403-9562422 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | chr6_2:9562431-9562450 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | chr6_2:9562698-9562717 | Msa0908380:intron | 25.0% |
| ! | TGATAAAAGAAAGAGAAGAT+TGG | - | chr6_2:9562767-9562786 | None:intergenic | 25.0% |
| !! | TTCTCTTTCTTTTATCACTT+AGG | + | chr6_2:9562770-9562789 | Msa0908380:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | chr6_2:9562953-9562972 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | chr6_2:9562954-9562973 | Msa0908380:CDS | 25.0% |
| !! | TATACACAAAAGATCCTTTT+TGG | + | chr6_2:9563251-9563270 | Msa0908380:CDS | 25.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | + | chr6_2:9562231-9562250 | Msa0908380:intron | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | - | chr6_2:9562290-9562309 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | + | chr6_2:9562372-9562391 | Msa0908380:intron | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | - | chr6_2:9562403-9562422 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | - | chr6_2:9562431-9562450 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | + | chr6_2:9562698-9562717 | Msa0908380:intron | 25.0% |
| ! | TGATAAAAGAAAGAGAAGAT+TGG | - | chr6_2:9562767-9562786 | None:intergenic | 25.0% |
| !! | TTCTCTTTCTTTTATCACTT+AGG | + | chr6_2:9562770-9562789 | Msa0908380:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | - | chr6_2:9562953-9562972 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | + | chr6_2:9562954-9562973 | Msa0908380:CDS | 25.0% |
| !! | TATACACAAAAGATCCTTTT+TGG | + | chr6_2:9563251-9563270 | Msa0908380:CDS | 25.0% |
| GATATACCAAGAAAGATGTA+CGG | + | chr6_2:9561908-9561927 | Msa0908380:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | chr6_2:9561946-9561965 | Msa0908380:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | chr6_2:9561947-9561966 | Msa0908380:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | chr6_2:9562104-9562123 | Msa0908380:intron | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | chr6_2:9562105-9562124 | Msa0908380:intron | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | chr6_2:9562212-9562231 | Msa0908380:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | chr6_2:9562477-9562496 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | chr6_2:9562477-9562496 | Msa0908380:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | chr6_2:9562577-9562596 | Msa0908380:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | chr6_2:9562999-9563018 | Msa0908380:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | chr6_2:9563077-9563096 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | chr6_2:9563106-9563125 | Msa0908380:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | chr6_2:9563160-9563179 | Msa0908380:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | chr6_2:9563187-9563206 | Msa0908380:CDS | 30.0% |
| GATATACCAAGAAAGATGTA+CGG | + | chr6_2:9561908-9561927 | Msa0908380:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | + | chr6_2:9561946-9561965 | Msa0908380:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | + | chr6_2:9561947-9561966 | Msa0908380:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | + | chr6_2:9562104-9562123 | Msa0908380:intron | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | + | chr6_2:9562105-9562124 | Msa0908380:intron | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | + | chr6_2:9562212-9562231 | Msa0908380:intron | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | - | chr6_2:9562477-9562496 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | + | chr6_2:9562477-9562496 | Msa0908380:intron | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | + | chr6_2:9562577-9562596 | Msa0908380:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | + | chr6_2:9562999-9563018 | Msa0908380:CDS | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | - | chr6_2:9563077-9563096 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | + | chr6_2:9563106-9563125 | Msa0908380:CDS | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | + | chr6_2:9563160-9563179 | Msa0908380:CDS | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | + | chr6_2:9563187-9563206 | Msa0908380:CDS | 30.0% |
| TTCATATTAACCGCTACTCT+AGG | + | chr6_2:9561799-9561818 | Msa0908380:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | chr6_2:9561886-9561905 | Msa0908380:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | chr6_2:9561896-9561915 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | chr6_2:9561917-9561936 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | chr6_2:9561948-9561967 | Msa0908380:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | chr6_2:9562032-9562051 | Msa0908380:intron | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | chr6_2:9562085-9562104 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | chr6_2:9562086-9562105 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | chr6_2:9562206-9562225 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | chr6_2:9562210-9562229 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | chr6_2:9562344-9562363 | Msa0908380:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | chr6_2:9562354-9562373 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | chr6_2:9562379-9562398 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | chr6_2:9562444-9562463 | Msa0908380:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | chr6_2:9562549-9562568 | Msa0908380:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | chr6_2:9562585-9562604 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | chr6_2:9562586-9562605 | Msa0908380:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | chr6_2:9562605-9562624 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | chr6_2:9562825-9562844 | Msa0908380:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | chr6_2:9562933-9562952 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | chr6_2:9562997-9563016 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | chr6_2:9562998-9563017 | Msa0908380:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | chr6_2:9563041-9563060 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | chr6_2:9563067-9563086 | Msa0908380:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | chr6_2:9563173-9563192 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | chr6_2:9563226-9563245 | Msa0908380:CDS | 35.0% | |
| TTCATATTAACCGCTACTCT+AGG | + | chr6_2:9561799-9561818 | Msa0908380:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | + | chr6_2:9561886-9561905 | Msa0908380:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | - | chr6_2:9561896-9561915 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | - | chr6_2:9561917-9561936 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | + | chr6_2:9561948-9561967 | Msa0908380:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | + | chr6_2:9562032-9562051 | Msa0908380:intron | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | - | chr6_2:9562085-9562104 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | - | chr6_2:9562086-9562105 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | - | chr6_2:9562206-9562225 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | - | chr6_2:9562210-9562229 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | + | chr6_2:9562344-9562363 | Msa0908380:intron | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | - | chr6_2:9562354-9562373 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | - | chr6_2:9562379-9562398 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | + | chr6_2:9562444-9562463 | Msa0908380:intron | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | + | chr6_2:9562549-9562568 | Msa0908380:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | - | chr6_2:9562585-9562604 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | + | chr6_2:9562586-9562605 | Msa0908380:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | - | chr6_2:9562605-9562624 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | + | chr6_2:9562825-9562844 | Msa0908380:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | - | chr6_2:9562933-9562952 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | - | chr6_2:9562997-9563016 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | + | chr6_2:9562998-9563017 | Msa0908380:CDS | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | - | chr6_2:9563041-9563060 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | + | chr6_2:9563067-9563086 | Msa0908380:CDS | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | - | chr6_2:9563173-9563192 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | + | chr6_2:9563226-9563245 | Msa0908380:CDS | 35.0% | |
| ATATTAACCGCTACTCTAGG+AGG | + | chr6_2:9561802-9561821 | Msa0908380:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | chr6_2:9561812-9561831 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | chr6_2:9561918-9561937 | Msa0908380:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | chr6_2:9561973-9561992 | Msa0908380:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | chr6_2:9561983-9562002 | Msa0908380:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | chr6_2:9561991-9562010 | Msa0908380:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | chr6_2:9562065-9562084 | Msa0908380:intron | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | chr6_2:9562084-9562103 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | chr6_2:9562098-9562117 | Msa0908380:intron | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | chr6_2:9562317-9562336 | Msa0908380:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | chr6_2:9562345-9562364 | Msa0908380:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | chr6_2:9562353-9562372 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | chr6_2:9562508-9562527 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | chr6_2:9562526-9562545 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | chr6_2:9562527-9562546 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | chr6_2:9562638-9562657 | Msa0908380:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | chr6_2:9562657-9562676 | Msa0908380:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | chr6_2:9562663-9562682 | Msa0908380:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | chr6_2:9562667-9562686 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | chr6_2:9562881-9562900 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | chr6_2:9563042-9563061 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | chr6_2:9563058-9563077 | Msa0908380:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | chr6_2:9563109-9563128 | Msa0908380:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | chr6_2:9563199-9563218 | Msa0908380:CDS | 40.0% |
| ATATTAACCGCTACTCTAGG+AGG | + | chr6_2:9561802-9561821 | Msa0908380:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | - | chr6_2:9561812-9561831 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | + | chr6_2:9561918-9561937 | Msa0908380:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | + | chr6_2:9561973-9561992 | Msa0908380:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | + | chr6_2:9561983-9562002 | Msa0908380:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | + | chr6_2:9561991-9562010 | Msa0908380:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | + | chr6_2:9562065-9562084 | Msa0908380:intron | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | - | chr6_2:9562084-9562103 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | + | chr6_2:9562098-9562117 | Msa0908380:intron | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | + | chr6_2:9562317-9562336 | Msa0908380:intron | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | + | chr6_2:9562345-9562364 | Msa0908380:intron | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | - | chr6_2:9562353-9562372 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | - | chr6_2:9562508-9562527 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | - | chr6_2:9562526-9562545 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | - | chr6_2:9562527-9562546 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | + | chr6_2:9562638-9562657 | Msa0908380:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | + | chr6_2:9562657-9562676 | Msa0908380:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | + | chr6_2:9562663-9562682 | Msa0908380:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | - | chr6_2:9562667-9562686 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | - | chr6_2:9562881-9562900 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | - | chr6_2:9563042-9563061 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | + | chr6_2:9563058-9563077 | Msa0908380:CDS | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | + | chr6_2:9563109-9563128 | Msa0908380:CDS | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | + | chr6_2:9563199-9563218 | Msa0908380:CDS | 40.0% |
| TCTTGGCTATATGGTTCGTC+CGG | + | chr6_2:9562000-9562019 | Msa0908380:intron | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | chr6_2:9562147-9562166 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | chr6_2:9562148-9562167 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | chr6_2:9562149-9562168 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | chr6_2:9562158-9562177 | Msa0908380:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | chr6_2:9562165-9562184 | Msa0908380:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | chr6_2:9562263-9562282 | Msa0908380:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | chr6_2:9562280-9562299 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | chr6_2:9562281-9562300 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | chr6_2:9562332-9562351 | Msa0908380:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | chr6_2:9562496-9562515 | Msa0908380:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | chr6_2:9562651-9562670 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | chr6_2:9562716-9562735 | Msa0908380:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | chr6_2:9562720-9562739 | Msa0908380:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | chr6_2:9562798-9562817 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | chr6_2:9562800-9562819 | Msa0908380:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | chr6_2:9562875-9562894 | None:intergenic | 45.0% | |
| TCTTGGCTATATGGTTCGTC+CGG | + | chr6_2:9562000-9562019 | Msa0908380:intron | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | - | chr6_2:9562147-9562166 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | - | chr6_2:9562148-9562167 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | - | chr6_2:9562149-9562168 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | + | chr6_2:9562158-9562177 | Msa0908380:intron | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | + | chr6_2:9562165-9562184 | Msa0908380:intron | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | + | chr6_2:9562263-9562282 | Msa0908380:intron | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | - | chr6_2:9562280-9562299 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | - | chr6_2:9562281-9562300 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | + | chr6_2:9562332-9562351 | Msa0908380:intron | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | + | chr6_2:9562496-9562515 | Msa0908380:intron | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | - | chr6_2:9562651-9562670 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | + | chr6_2:9562716-9562735 | Msa0908380:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | + | chr6_2:9562720-9562739 | Msa0908380:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | - | chr6_2:9562798-9562817 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | + | chr6_2:9562800-9562819 | Msa0908380:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | - | chr6_2:9562875-9562894 | None:intergenic | 45.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | + | chr6_2:9561966-9561985 | Msa0908380:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | chr6_2:9562001-9562020 | Msa0908380:intron | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | chr6_2:9562002-9562021 | Msa0908380:intron | 50.0% | |
| CTTGAAGCTCTATCTCTCCC+CGG | - | chr6_2:9562022-9562041 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | chr6_2:9562141-9562160 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | chr6_2:9562142-9562161 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | chr6_2:9562167-9562186 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | chr6_2:9562597-9562616 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | chr6_2:9562854-9562873 | None:intergenic | 50.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | + | chr6_2:9561966-9561985 | Msa0908380:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | + | chr6_2:9562001-9562020 | Msa0908380:intron | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | + | chr6_2:9562002-9562021 | Msa0908380:intron | 50.0% | |
| CTTGAAGCTCTATCTCTCCC+CGG | - | chr6_2:9562022-9562041 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | - | chr6_2:9562141-9562160 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | - | chr6_2:9562142-9562161 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | - | chr6_2:9562167-9562186 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | - | chr6_2:9562597-9562616 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | - | chr6_2:9562854-9562873 | None:intergenic | 50.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | chr6_2:9562138-9562157 | Msa0908380:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | + | chr6_2:9562138-9562157 | Msa0908380:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 9561775 | 9563285 | 9561775 | ID=Msa0908380;Name=Msa0908380 |
| chr6_2 | mRNA | 9561775 | 9563285 | 9561775 | ID=Msa0908380-mRNA-1;Parent=Msa0908380;Name=Msa0908380-mRNA-1;_AED=0.80;_eAED=0.80;_QI=0|0|0|0.66|1|1|3|0|245 |
| chr6_2 | exon | 9561775 | 9562012 | 9561775 | ID=Msa0908380-mRNA-1:exon:2286;Parent=Msa0908380-mRNA-1 |
| chr6_2 | exon | 9562120 | 9562169 | 9562120 | ID=Msa0908380-mRNA-1:exon:2287;Parent=Msa0908380-mRNA-1 |
| chr6_2 | exon | 9562836 | 9563285 | 9562836 | ID=Msa0908380-mRNA-1:exon:2288;Parent=Msa0908380-mRNA-1 |
| chr6_2 | CDS | 9561775 | 9562012 | 9561775 | ID=Msa0908380-mRNA-1:cds;Parent=Msa0908380-mRNA-1 |
| chr6_2 | CDS | 9562120 | 9562169 | 9562120 | ID=Msa0908380-mRNA-1:cds;Parent=Msa0908380-mRNA-1 |
| chr6_2 | CDS | 9562836 | 9563285 | 9562836 | ID=Msa0908380-mRNA-1:cds;Parent=Msa0908380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
