Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263770 | RYR53088.1 | 71.942 | 278 | 24 | 2 | 50 | 273 | 68 | 345 | 1.46e-129 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263770 | sp|P07135|RR7_SOYBN | 93.939 | 132 | 4 | 1 | 81 | 208 | 23 | 154 | 1.19e-82 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263770 | A0A445CQA9 | 71.942 | 278 | 24 | 2 | 50 | 273 | 68 | 345 | 6.97e-130 | 382 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0202640 | Msa0263770 | 0.807458 | 5.004964e-50 | -8.615850e-47 |
| Msa0263770 | Msa0268250 | 0.817624 | 2.994019e-52 | -8.615850e-47 |
| Msa0263770 | Msa0268260 | 0.844034 | 9.703836e-59 | -8.615850e-47 |
| Msa0263770 | Msa0268270 | 0.884562 | 1.724932e-71 | -8.615850e-47 |
| Msa0263770 | Msa0268300 | 0.846485 | 2.109185e-59 | -8.615850e-47 |
| Msa0263770 | Msa0268310 | 0.838114 | 3.485718e-57 | -8.615850e-47 |
| Msa0263770 | Msa0268630 | 0.818767 | 1.650622e-52 | -8.615850e-47 |
| Msa0263770 | Msa0268830 | 0.806101 | 9.687433e-50 | -8.615850e-47 |
| Msa0263770 | Msa0268950 | 0.800276 | 1.555085e-48 | -8.615850e-47 |
| Msa0263770 | Msa0269040 | 0.807578 | 4.721235e-50 | -8.615850e-47 |
| Msa0263770 | Msa0269130 | 0.824283 | 8.779762e-54 | -8.615850e-47 |
| Msa0263770 | Msa0269140 | 0.846236 | 2.466092e-59 | -8.615850e-47 |
| Msa0263770 | Msa0269150 | 0.887803 | 1.035373e-72 | -8.615850e-47 |
| Msa0263770 | Msa0344190 | 0.801857 | 7.387549e-49 | -8.615850e-47 |
| Msa0263770 | Msa0344310 | 0.803056 | 4.183168e-49 | -8.615850e-47 |
| Msa0263770 | Msa0405420 | 0.859626 | 3.631169e-63 | -8.615850e-47 |
| Msa0263770 | Msa0405430 | 0.918417 | 1.599908e-86 | -8.615850e-47 |
| Msa0263770 | Msa0405440 | 0.875059 | 4.151804e-68 | -8.615850e-47 |
| Msa0263770 | Msa0405510 | 0.854922 | 8.910155e-62 | -8.615850e-47 |
| Msa0263770 | Msa0405520 | 0.912247 | 2.423034e-83 | -8.615850e-47 |
| Msa0263770 | Msa0405530 | 0.879275 | 1.422715e-69 | -8.615850e-47 |
| Msa0263770 | Msa0582510 | 0.802237 | 6.169721e-49 | -8.615850e-47 |
| Msa0263770 | Msa0582690 | 0.808540 | 2.945173e-50 | -8.615850e-47 |
| Msa0263770 | Msa0582810 | 0.807355 | 5.264671e-50 | -8.615850e-47 |
| Msa0263770 | Msa0591290 | 0.897383 | 1.483274e-76 | -8.615850e-47 |
| Msa0263770 | Msa0591310 | 0.849083 | 4.058668e-60 | -8.615850e-47 |
| Msa0263770 | Msa0591350 | 0.897337 | 1.551066e-76 | -8.615850e-47 |
| Msa0263770 | Msa0591360 | 0.830767 | 2.439753e-55 | -8.615850e-47 |
| Msa0263770 | Msa0591380 | 0.844029 | 9.737190e-59 | -8.615850e-47 |
| Msa0263770 | Msa0668630 | 0.811965 | 5.375712e-51 | -8.615850e-47 |
| Msa0263770 | Msa0844260 | 0.815262 | 1.011839e-51 | -8.615850e-47 |
| Msa0263770 | Msa0867680 | 0.836474 | 9.160134e-57 | -8.615850e-47 |
| Msa0263770 | Msa0867690 | 0.820060 | 8.371669e-53 | -8.615850e-47 |
| Msa0263770 | Msa0876520 | 0.866657 | 2.429411e-65 | -8.615850e-47 |
| Msa0263770 | Msa0876530 | 0.833261 | 5.902903e-56 | -8.615850e-47 |
| Msa0263770 | Msa0908220 | 0.841494 | 4.593380e-58 | -8.615850e-47 |
| Msa0263770 | Msa0908230 | 0.844666 | 6.564221e-59 | -8.615850e-47 |
| Msa0263770 | Msa0908240 | 0.882545 | 9.520847e-71 | -8.615850e-47 |
| Msa0263770 | Msa0908310 | 0.880206 | 6.645835e-70 | -8.615850e-47 |
| Msa0263770 | Msa0908320 | 0.838539 | 2.708097e-57 | -8.615850e-47 |
| Msa0263770 | Msa0908370 | 0.864679 | 1.021933e-64 | -8.615850e-47 |
| Msa0263770 | Msa0908380 | 0.802973 | 4.350350e-49 | -8.615850e-47 |
| Msa0263770 | Msa0908430 | 0.855586 | 5.713698e-62 | -8.615850e-47 |
| Msa0263770 | Msa0908440 | 0.846622 | 1.935345e-59 | -8.615850e-47 |
| Msa0263770 | Msa0908450 | 0.883132 | 5.809493e-71 | -8.615850e-47 |
| Msa0263770 | Msa0908480 | 0.805030 | 1.624929e-49 | -8.615850e-47 |
| Msa0263770 | Msa0908530 | 0.868162 | 8.013236e-66 | -8.615850e-47 |
| Msa0263770 | Msa0908540 | 0.832198 | 1.084177e-55 | -8.615850e-47 |
| Msa0263770 | Msa0908590 | 0.832894 | 7.286494e-56 | -8.615850e-47 |
| Msa0263770 | Msa0908600 | 0.825059 | 5.761439e-54 | -8.615850e-47 |
| Msa0263770 | Msa0908610 | 0.846832 | 1.695702e-59 | -8.615850e-47 |
| Msa0263770 | Msa0908650 | 0.831680 | 1.455421e-55 | -8.615850e-47 |
| Msa0263770 | Msa0908660 | 0.820664 | 6.085094e-53 | -8.615850e-47 |
| Msa0263770 | Msa0908670 | 0.872079 | 4.188005e-67 | -8.615850e-47 |
| Msa0263770 | Msa0908720 | 0.863610 | 2.201966e-64 | -8.615850e-47 |
| Msa0263770 | Msa0908730 | 0.850113 | 2.095154e-60 | -8.615850e-47 |
| Msa0263770 | Msa0911190 | 0.873621 | 1.275484e-67 | -8.615850e-47 |
| Msa0263770 | Msa0911200 | 0.817307 | 3.529567e-52 | -8.615850e-47 |
| Msa0263770 | Msa0911230 | 0.843052 | 1.776111e-58 | -8.615850e-47 |
| Msa0263770 | Msa0924820 | 0.808502 | 3.000860e-50 | -8.615850e-47 |
| Msa0263770 | Msa0924830 | 0.829151 | 6.044814e-55 | -8.615850e-47 |
| Msa0263770 | Msa0924930 | 0.880907 | 3.726841e-70 | -8.615850e-47 |
| Msa0263770 | Msa0924940 | 0.842094 | 3.189109e-58 | -8.615850e-47 |
| Msa0263770 | Msa0925100 | 0.940887 | 1.078777e-100 | -8.615850e-47 |
| Msa0263770 | Msa0925110 | 0.851922 | 6.472088e-61 | -8.615850e-47 |
| Msa0263770 | Msa0931220 | 0.809750 | 1.621907e-50 | -8.615850e-47 |
| Msa0263770 | Msa0931260 | 0.809926 | 1.485880e-50 | -8.615850e-47 |
| Msa0263770 | Msa0983630 | 0.847881 | 8.733757e-60 | -8.615850e-47 |
| Msa0263770 | Msa0983640 | 0.830454 | 2.910969e-55 | -8.615850e-47 |
| Msa0263770 | Msa1022050 | 0.847149 | 1.388363e-59 | -8.615850e-47 |
| Msa0263770 | Msa1022060 | 0.805534 | 1.274242e-49 | -8.615850e-47 |
| Msa0263770 | Msa1064410 | 0.825315 | 5.013720e-54 | -8.615850e-47 |
| Msa0263770 | Msa1086140 | 0.805451 | 1.326756e-49 | -8.615850e-47 |
| Msa0263770 | Msa1086190 | 0.809747 | 1.624270e-50 | -8.615850e-47 |
| Msa0263770 | Msa1086550 | 0.833335 | 5.657106e-56 | -8.615850e-47 |
| Msa0263770 | Msa1086590 | 0.840920 | 6.500522e-58 | -8.615850e-47 |
| Msa0263770 | Msa1086600 | 0.828977 | 6.660933e-55 | -8.615850e-47 |
| Msa0263770 | Msa1086720 | 0.845951 | 2.947868e-59 | -8.615850e-47 |
| Msa0263770 | Msa1086730 | 0.831727 | 1.417178e-55 | -8.615850e-47 |
| Msa0263770 | Msa1086740 | 0.882119 | 1.361134e-70 | -8.615850e-47 |
| Msa0263770 | Msa1086790 | 0.875799 | 2.318117e-68 | -8.615850e-47 |
| Msa0263770 | Msa1086800 | 0.843700 | 1.192532e-58 | -8.615850e-47 |
| Msa0263770 | Msa1086960 | 0.849765 | 2.620368e-60 | -8.615850e-47 |
| Msa0263770 | Msa1086970 | 0.835095 | 2.048477e-56 | -8.615850e-47 |
| Msa0263770 | Msa1087030 | 0.829799 | 4.205202e-55 | -8.615850e-47 |
| Msa0263770 | Msa1087040 | 0.838459 | 2.840225e-57 | -8.615850e-47 |
| Msa0263770 | Msa1087050 | 0.867034 | 1.842023e-65 | -8.615850e-47 |
| Msa0263770 | Msa1087110 | 0.866150 | 3.518222e-65 | -8.615850e-47 |
| Msa0263770 | Msa1087120 | 0.842601 | 2.340465e-58 | -8.615850e-47 |
| Msa0263770 | Msa1143120 | 0.803650 | 3.150744e-49 | -8.615850e-47 |
| Msa0263770 | Msa1305090 | 0.806602 | 7.596880e-50 | -8.615850e-47 |
| Msa0263770 | Msa1342040 | 0.817215 | 3.702348e-52 | -8.615850e-47 |
| Msa0263770 | Msa1354420 | 0.862341 | 5.428066e-64 | -8.615850e-47 |
| Msa0263770 | Msa1354430 | 0.843596 | 1.271557e-58 | -8.615850e-47 |
| Msa0263770 | Msa1354480 | 0.842863 | 1.994597e-58 | -8.615850e-47 |
| Msa0263770 | Msa1354490 | 0.856190 | 3.804684e-62 | -8.615850e-47 |
| Msa0263770 | Msa1354500 | 0.878073 | 3.772277e-69 | -8.615850e-47 |
| Msa0263770 | Msa1354550 | 0.860716 | 1.701259e-63 | -8.615850e-47 |
| Msa0263770 | Msa1354560 | 0.824991 | 5.979544e-54 | -8.615850e-47 |
| Msa0263770 | Msa1354610 | 0.851306 | 9.670048e-61 | -8.615850e-47 |
| Msa0263770 | Msa1354620 | 0.838028 | 3.668327e-57 | -8.615850e-47 |
| Msa0263770 | Msa1354630 | 0.872300 | 3.535823e-67 | -8.615850e-47 |
| Msa0263770 | Msa1354680 | 0.867326 | 1.486274e-65 | -8.615850e-47 |
| Msa0263770 | Msa1354690 | 0.842402 | 2.643168e-58 | -8.615850e-47 |
| Msa0263770 | Msa1354700 | 0.824098 | 9.704227e-54 | -8.615850e-47 |
| Msa0263770 | Msa1354740 | 0.855463 | 6.202905e-62 | -8.615850e-47 |
| Msa0263770 | Msa1354750 | 0.840509 | 8.330961e-58 | -8.615850e-47 |
| Msa0263770 | Msa1354760 | 0.878603 | 2.457734e-69 | -8.615850e-47 |
| Msa0263770 | Msa1354810 | 0.866344 | 3.054988e-65 | -8.615850e-47 |
| Msa0263770 | Msa1354820 | 0.840996 | 6.209357e-58 | -8.615850e-47 |
| Msa0263770 | Msa1354980 | 0.862668 | 4.304868e-64 | -8.615850e-47 |
| Msa0263770 | Msa1354990 | 0.833098 | 6.480560e-56 | -8.615850e-47 |
| Msa0263770 | Msa1365890 | 0.881198 | 2.928206e-70 | -8.615850e-47 |
| Msa0263770 | Msa1365950 | 0.820066 | 8.346732e-53 | -8.615850e-47 |
| Msa0263770 | Msa1365960 | 0.822512 | 2.276251e-53 | -8.615850e-47 |
| Msa0263770 | Msa1365970 | 0.881314 | 2.659657e-70 | -8.615850e-47 |
| Msa0263770 | Msa1366080 | 0.848704 | 5.173839e-60 | -8.615850e-47 |
| Msa0263770 | Msa1368230 | 0.839636 | 1.407740e-57 | -8.615850e-47 |
| Msa0263770 | Msa1368240 | 0.875813 | 2.290988e-68 | -8.615850e-47 |
| Msa0263770 | Msa1385410 | 0.850485 | 1.646888e-60 | -8.615850e-47 |
| Msa0263770 | Msa1385420 | 0.827309 | 1.679580e-54 | -8.615850e-47 |
| Msa0263770 | Msa1391090 | 0.818654 | 1.750657e-52 | -8.615850e-47 |
| Msa0263770 | Msa1391100 | 0.854385 | 1.274886e-61 | -8.615850e-47 |
| Msa0263770 | Msa1391110 | 0.866807 | 2.175503e-65 | -8.615850e-47 |
| Msa0263770 | Msa1391160 | 0.829900 | 3.973467e-55 | -8.615850e-47 |
| Msa0263770 | Msa1391170 | 0.830556 | 2.747520e-55 | -8.615850e-47 |
| Msa0263770 | Msa1391220 | 0.841051 | 6.007043e-58 | -8.615850e-47 |
| Msa0263770 | Msa1391230 | 0.829326 | 5.480063e-55 | -8.615850e-47 |
| Msa0263770 | Msa1391240 | 0.889185 | 3.038128e-73 | -8.615850e-47 |
| Msa0263770 | Msa1394030 | 0.800709 | 1.268973e-48 | -8.615850e-47 |
| Msa0263770 | Msa1394040 | 0.807610 | 4.646223e-50 | -8.615850e-47 |
| Msa0263770 | Msa1394210 | 0.806970 | 6.352109e-50 | -8.615850e-47 |
| Msa0263770 | Msa1460120 | 0.950335 | 2.037066e-108 | -8.615850e-47 |
| Msa0263770 | Msa1460130 | 0.863254 | 2.838362e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263770 | MtrunA17_CPg0492421 | 88.806 | 134 | 9 | 2 | 81 | 208 | 23 | 156 | 1.33e-77 | 232 |
| Msa0263770 | MtrunA17_Chr4g0016101 | 88.806 | 134 | 9 | 2 | 81 | 208 | 23 | 156 | 1.33e-77 | 232 |
| Msa0263770 | MtrunA17_Chr3g0090841 | 88.806 | 134 | 9 | 2 | 81 | 208 | 23 | 156 | 1.33e-77 | 232 |
| Msa0263770 | MtrunA17_CPg0492431 | 96.875 | 64 | 2 | 0 | 210 | 273 | 4 | 67 | 8.07e-36 | 129 |
| Msa0263770 | MtrunA17_Chr3g0090851 | 96.875 | 64 | 2 | 0 | 210 | 273 | 4 | 67 | 8.07e-36 | 129 |
| Msa0263770 | MtrunA17_Chr4g0016091 | 96.875 | 64 | 2 | 0 | 210 | 273 | 4 | 67 | 8.07e-36 | 129 |
| Msa0263770 | MtrunA17_Chr4g0002541 | 83.333 | 60 | 10 | 0 | 83 | 142 | 1 | 60 | 2.19e-28 | 103 |
| Msa0263770 | MtrunA17_CPg0492401 | 77.083 | 48 | 7 | 1 | 1 | 44 | 1 | 48 | 4.20e-18 | 75.9 |
| Msa0263770 | MtrunA17_Chr4g0057401 | 87.179 | 39 | 5 | 0 | 170 | 208 | 1 | 39 | 4.99e-15 | 67.4 |
| Msa0263770 | MtrunA17_Chr7g0234981 | 90.323 | 31 | 3 | 0 | 50 | 80 | 52 | 82 | 5.09e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263770 | ATCG00900.1 | 92.424 | 132 | 6 | 1 | 81 | 208 | 23 | 154 | 8.37e-83 | 245 |
| Msa0263770 | ATCG01240.1 | 92.424 | 132 | 6 | 1 | 81 | 208 | 23 | 154 | 8.37e-83 | 245 |
| Msa0263770 | ATCG00905.1 | 100.000 | 31 | 0 | 0 | 50 | 80 | 44 | 74 | 2.78e-14 | 67.0 |
| Msa0263770 | ATCG01230.1 | 100.000 | 31 | 0 | 0 | 50 | 80 | 44 | 74 | 2.78e-14 | 67.0 |
| Msa0263770 | ATMG01270.1 | 30.657 | 137 | 87 | 3 | 81 | 210 | 12 | 147 | 5.75e-12 | 62.8 |
| Msa0263770 | AT2G07696.1 | 30.657 | 137 | 87 | 3 | 81 | 210 | 12 | 147 | 5.75e-12 | 62.8 |
Find 51 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAAGTTCCCGTTGAAAT+AGG | 0.307921 | 2_2:+63482050 | Msa0263770:CDS |
| AAAACGTCCAGGTCGAAATA+TGG | 0.317789 | 2_2:+63482124 | Msa0263770:CDS |
| CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | 2_2:+63480726 | Msa0263770:CDS |
| AGATACCCGCTTTCGTGCTT+TGG | 0.338855 | 2_2:-63481084 | None:intergenic |
| CAAATTAAGTTCCGAATTAG+TGG | 0.342047 | 2_2:+63482151 | Msa0263770:CDS |
| TGGCGATGCCATACGCAAAA+AGG | 0.366109 | 2_2:+63482190 | Msa0263770:CDS |
| AACCTATGTTGTATATTAAG+AGG | 0.368497 | 2_2:+63480655 | None:intergenic |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | 2_2:-63481676 | None:intergenic |
| TTTGGCAGCATCCACTAATT+CGG | 0.404543 | 2_2:-63482162 | None:intergenic |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | 2_2:-63481703 | None:intergenic |
| GCTTGACGTAAAACAGATAG+TGG | 0.426676 | 2_2:-63481969 | None:intergenic |
| GTAAAAGCAAGACGCGTAAA+CGG | 0.427761 | 2_2:+63482020 | Msa0263770:CDS |
| TATGGCATCGCCATTCCCTT+TGG | 0.436234 | 2_2:-63482180 | None:intergenic |
| TACCCGCTTTCGTGCTTTGG+TGG | 0.452970 | 2_2:-63481081 | None:intergenic |
| TGTGTGGATCCTATTTCAAC+GGG | 0.470768 | 2_2:-63482059 | None:intergenic |
| TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | 2_2:-63480718 | None:intergenic |
| ACCCGCTTTCGTGCTTTGGT+GGG | 0.499056 | 2_2:-63481080 | None:intergenic |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | 2_2:-63481675 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | 2_2:+63481676 | Msa0263770:CDS |
| TTATCTATCGAGCTATGAAA+AGG | 0.512086 | 2_2:+63481922 | Msa0263770:CDS |
| GTGGATGCTGCCAAAGGGAA+TGG | 0.532446 | 2_2:+63482170 | Msa0263770:CDS |
| TAATCGATTAGTTAACATGT+TGG | 0.538486 | 2_2:+63481854 | Msa0263770:intron |
| GGCGCATCCCGAAAACGTCC+AGG | 0.540732 | 2_2:+63482113 | Msa0263770:intron |
| AAAGGAAGAGACTCATAGAA+TGG | 0.548096 | 2_2:+63482208 | Msa0263770:CDS |
| TTGTGTGGATCCTATTTCAA+CGG | 0.548545 | 2_2:-63482060 | None:intergenic |
| ACCCACCAAAGCACGAAAGC+GGG | 0.549035 | 2_2:+63481079 | Msa0263770:CDS |
| ATCGAAAAGAAGCAAATGAA+AGG | 0.561694 | 2_2:-63482553 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | 2_2:+63481603 | Msa0263770:intron |
| TCATGGGTTCTTCTCTCCAT+CGG | 0.567612 | 2_2:-63482722 | None:intergenic |
| TAACGGCGCTGTTGTTCCGA+TGG | 0.571426 | 2_2:+63482706 | Msa0263770:CDS |
| AATTAGTGGATGCTGCCAAA+GGG | 0.575951 | 2_2:+63482165 | Msa0263770:CDS |
| GAATTAGTGGATGCTGCCAA+AGG | 0.584526 | 2_2:+63482164 | Msa0263770:CDS |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | 2_2:+63481650 | Msa0263770:CDS |
| GACCCACCAAAGCACGAAAG+CGG | 0.587922 | 2_2:+63481078 | Msa0263770:CDS |
| ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | 2_2:+63480734 | Msa0263770:CDS |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | 2_2:+63481604 | Msa0263770:intron |
| AGAGACTCATAGAATGGCAG+AGG | 0.593635 | 2_2:+63482214 | Msa0263770:CDS |
| AACCTCTTAATATACAACAT+AGG | 0.594876 | 2_2:-63480657 | None:intergenic |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | 2_2:+63481689 | Msa0263770:CDS |
| TTGAAAGCCATATTTCGACC+TGG | 0.605724 | 2_2:-63482131 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | 2_2:+63481668 | Msa0263770:CDS |
| GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | 2_2:-63480708 | None:intergenic |
| ATTGTACCATCCTAAAAGCA+AGG | 0.638231 | 2_2:-63480685 | None:intergenic |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | 2_2:+63481626 | Msa0263770:CDS |
| AAGTTTAGTAATGAGCATAA+CGG | 0.644237 | 2_2:+63482689 | Msa0263770:CDS |
| GTTAACCGTATTATGAAACA+CGG | 0.650772 | 2_2:+63481876 | Msa0263770:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | 2_2:+63481605 | Msa0263770:intron |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | 2_2:-63481644 | None:intergenic |
| TTTACGTCAAGCAATACGTG+GGG | 0.729232 | 2_2:+63481980 | Msa0263770:CDS |
| GTTGAAATAGGATCCACACA+AGG | 0.731975 | 2_2:+63482062 | Msa0263770:CDS |
| GTACCATCCTAAAAGCAAGG+AGG | 0.768564 | 2_2:-63480682 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAGAATAGAAAATATTAA+TGG | + | chr2_2:63480928-63480947 | Msa0263770:intron | 15.0% |
| !!! | CATTTTTTTATAACTTATAG+GGG | - | chr2_2:63481759-63481778 | None:intergenic | 15.0% |
| !!! | CCATTTTTTTATAACTTATA+GGG | - | chr2_2:63481760-63481779 | None:intergenic | 15.0% |
| !!! | TCCATTTTTTTATAACTTAT+AGG | - | chr2_2:63481761-63481780 | None:intergenic | 15.0% |
| !! | AATAAATAAAGAGGAATATT+TGG | + | chr2_2:63482435-63482454 | Msa0263770:intron | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | + | chr2_2:63480928-63480947 | Msa0263770:intron | 15.0% |
| !!! | CATTTTTTTATAACTTATAG+GGG | - | chr2_2:63481759-63481778 | None:intergenic | 15.0% |
| !!! | CCATTTTTTTATAACTTATA+GGG | - | chr2_2:63481760-63481779 | None:intergenic | 15.0% |
| !!! | TCCATTTTTTTATAACTTAT+AGG | - | chr2_2:63481761-63481780 | None:intergenic | 15.0% |
| !! | AATAAATAAAGAGGAATATT+TGG | + | chr2_2:63482435-63482454 | Msa0263770:intron | 15.0% |
| !! | ATCTATCTATAATGATCAAT+TGG | - | chr2_2:63481023-63481042 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | + | chr2_2:63481289-63481308 | Msa0263770:intron | 20.0% |
| !!! | AATTAGTTCTCGTTATTTTT+AGG | + | chr2_2:63481334-63481353 | Msa0263770:intron | 20.0% |
| !!! | ATTAGTTCTCGTTATTTTTA+GGG | + | chr2_2:63481335-63481354 | Msa0263770:intron | 20.0% |
| !! | CCCTATAAGTTATAAAAAAA+TGG | + | chr2_2:63481757-63481776 | Msa0263770:intron | 20.0% |
| !! | AGAATCAATAGAAAAAGAAT+CGG | + | chr2_2:63482332-63482351 | Msa0263770:intron | 20.0% |
| !! | TTGCTTAAGAATAAATAAAG+AGG | + | chr2_2:63482426-63482445 | Msa0263770:intron | 20.0% |
| !!! | AGGAATATTTGGTATTTTTT+TGG | + | chr2_2:63482446-63482465 | Msa0263770:intron | 20.0% |
| !! | ATCTATCTATAATGATCAAT+TGG | - | chr2_2:63481023-63481042 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | + | chr2_2:63481289-63481308 | Msa0263770:intron | 20.0% |
| !!! | AATTAGTTCTCGTTATTTTT+AGG | + | chr2_2:63481334-63481353 | Msa0263770:intron | 20.0% |
| !!! | ATTAGTTCTCGTTATTTTTA+GGG | + | chr2_2:63481335-63481354 | Msa0263770:intron | 20.0% |
| !! | CCCTATAAGTTATAAAAAAA+TGG | + | chr2_2:63481757-63481776 | Msa0263770:intron | 20.0% |
| !! | AGAATCAATAGAAAAAGAAT+CGG | + | chr2_2:63482332-63482351 | Msa0263770:intron | 20.0% |
| !! | TTGCTTAAGAATAAATAAAG+AGG | + | chr2_2:63482426-63482445 | Msa0263770:intron | 20.0% |
| !!! | AGGAATATTTGGTATTTTTT+TGG | + | chr2_2:63482446-63482465 | Msa0263770:intron | 20.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | - | chr2_2:63480797-63480816 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | + | chr2_2:63481036-63481055 | Msa0263770:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | + | chr2_2:63481112-63481131 | Msa0263770:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | + | chr2_2:63481113-63481132 | Msa0263770:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | + | chr2_2:63481180-63481199 | Msa0263770:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | + | chr2_2:63481190-63481209 | Msa0263770:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | - | chr2_2:63481253-63481272 | None:intergenic | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | - | chr2_2:63481389-63481408 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | - | chr2_2:63481589-63481608 | None:intergenic | 25.0% |
| !! | GGGGCTAAAATAATTTATTT+TGG | - | chr2_2:63481740-63481759 | None:intergenic | 25.0% |
| ! | ACTAATCGATTACGATAAAT+TGG | - | chr2_2:63481846-63481865 | None:intergenic | 25.0% |
| !! | TAATCGATTAGTTAACATGT+TGG | + | chr2_2:63481854-63481873 | Msa0263770:intron | 25.0% |
| !! | TTTTTCCGTGTTTCATAATA+CGG | - | chr2_2:63481884-63481903 | None:intergenic | 25.0% |
| !! | GATTCTTTTCCAATTATGTA+TGG | - | chr2_2:63482318-63482337 | None:intergenic | 25.0% |
| ! | GAAGAATTAGACCAAAAATT+AGG | - | chr2_2:63482605-63482624 | None:intergenic | 25.0% |
| ! | AAGTTTAGTAATGAGCATAA+CGG | + | chr2_2:63482689-63482708 | Msa0263770:CDS | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | - | chr2_2:63480797-63480816 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | + | chr2_2:63481036-63481055 | Msa0263770:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | + | chr2_2:63481112-63481131 | Msa0263770:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | + | chr2_2:63481113-63481132 | Msa0263770:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | + | chr2_2:63481180-63481199 | Msa0263770:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | + | chr2_2:63481190-63481209 | Msa0263770:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | - | chr2_2:63481253-63481272 | None:intergenic | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | - | chr2_2:63481389-63481408 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | - | chr2_2:63481589-63481608 | None:intergenic | 25.0% |
| !! | GGGGCTAAAATAATTTATTT+TGG | - | chr2_2:63481740-63481759 | None:intergenic | 25.0% |
| ! | ACTAATCGATTACGATAAAT+TGG | - | chr2_2:63481846-63481865 | None:intergenic | 25.0% |
| !! | TAATCGATTAGTTAACATGT+TGG | + | chr2_2:63481854-63481873 | Msa0263770:intron | 25.0% |
| !! | TTTTTCCGTGTTTCATAATA+CGG | - | chr2_2:63481884-63481903 | None:intergenic | 25.0% |
| !! | GATTCTTTTCCAATTATGTA+TGG | - | chr2_2:63482318-63482337 | None:intergenic | 25.0% |
| ! | GAAGAATTAGACCAAAAATT+AGG | - | chr2_2:63482605-63482624 | None:intergenic | 25.0% |
| ! | AAGTTTAGTAATGAGCATAA+CGG | + | chr2_2:63482689-63482708 | Msa0263770:CDS | 25.0% |
| ! | CAATTGGATCTAAAATTGAC+GGG | - | chr2_2:63481169-63481188 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | - | chr2_2:63481170-63481189 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | + | chr2_2:63481168-63481187 | Msa0263770:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | - | chr2_2:63481185-63481204 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | + | chr2_2:63481183-63481202 | Msa0263770:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | + | chr2_2:63481189-63481208 | Msa0263770:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | - | chr2_2:63481579-63481598 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | + | chr2_2:63481603-63481622 | Msa0263770:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | + | chr2_2:63481705-63481724 | Msa0263770:intron | 30.0% |
| ! | ATAAATTGGATCGGATTTTG+CGG | - | chr2_2:63481832-63481851 | None:intergenic | 30.0% |
| TCGATTACGATAAATTGGAT+CGG | - | chr2_2:63481841-63481860 | None:intergenic | 30.0% | |
| GTTAACCGTATTATGAAACA+CGG | + | chr2_2:63481876-63481895 | Msa0263770:CDS | 30.0% | |
| GAAACACGGAAAAAAATCAT+TGG | + | chr2_2:63481890-63481909 | Msa0263770:CDS | 30.0% | |
| TTATCTATCGAGCTATGAAA+AGG | + | chr2_2:63481922-63481941 | Msa0263770:CDS | 30.0% | |
| !! | TCTTGCTTTTACTGCTATAT+CGG | - | chr2_2:63482012-63482031 | None:intergenic | 30.0% |
| CAAATTAAGTTCCGAATTAG+TGG | + | chr2_2:63482151-63482170 | Msa0263770:CDS | 30.0% | |
| ACATAGACCTATGTTATGTA+TGG | + | chr2_2:63482290-63482309 | Msa0263770:intron | 30.0% | |
| TATGGATCCATACATAACAT+AGG | - | chr2_2:63482300-63482319 | None:intergenic | 30.0% | |
| TGTATGGATCCATACATAAT+TGG | + | chr2_2:63482306-63482325 | Msa0263770:intron | 30.0% | |
| GAAAGACGAAATAGAAATGA+TGG | + | chr2_2:63482380-63482399 | Msa0263770:intron | 30.0% | |
| ATCGAAAAGAAGCAAATGAA+AGG | - | chr2_2:63482556-63482575 | None:intergenic | 30.0% | |
| ! | TTTCATTTGCTTCTTTTCGA+TGG | + | chr2_2:63482555-63482574 | Msa0263770:CDS | 30.0% |
| !!! | CGATGGAAGTTTTATTTTTC+CGG | + | chr2_2:63482572-63482591 | Msa0263770:CDS | 30.0% |
| CCAAAAATTAGGATCAATTC+CGG | - | chr2_2:63482594-63482613 | None:intergenic | 30.0% | |
| ! | AGATAGATCTTTTTGATCAG+AGG | - | chr2_2:63482646-63482665 | None:intergenic | 30.0% |
| CTGATCAAAAAGATCTATCT+TGG | + | chr2_2:63482646-63482665 | Msa0263770:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | - | chr2_2:63481169-63481188 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | - | chr2_2:63481170-63481189 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | + | chr2_2:63481168-63481187 | Msa0263770:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | - | chr2_2:63481185-63481204 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | + | chr2_2:63481183-63481202 | Msa0263770:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | + | chr2_2:63481189-63481208 | Msa0263770:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | - | chr2_2:63481579-63481598 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | + | chr2_2:63481603-63481622 | Msa0263770:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | + | chr2_2:63481705-63481724 | Msa0263770:intron | 30.0% |
| ! | ATAAATTGGATCGGATTTTG+CGG | - | chr2_2:63481832-63481851 | None:intergenic | 30.0% |
| TCGATTACGATAAATTGGAT+CGG | - | chr2_2:63481841-63481860 | None:intergenic | 30.0% | |
| GTTAACCGTATTATGAAACA+CGG | + | chr2_2:63481876-63481895 | Msa0263770:CDS | 30.0% | |
| GAAACACGGAAAAAAATCAT+TGG | + | chr2_2:63481890-63481909 | Msa0263770:CDS | 30.0% | |
| TTATCTATCGAGCTATGAAA+AGG | + | chr2_2:63481922-63481941 | Msa0263770:CDS | 30.0% | |
| !! | TCTTGCTTTTACTGCTATAT+CGG | - | chr2_2:63482012-63482031 | None:intergenic | 30.0% |
| CAAATTAAGTTCCGAATTAG+TGG | + | chr2_2:63482151-63482170 | Msa0263770:CDS | 30.0% | |
| ACATAGACCTATGTTATGTA+TGG | + | chr2_2:63482290-63482309 | Msa0263770:intron | 30.0% | |
| TATGGATCCATACATAACAT+AGG | - | chr2_2:63482300-63482319 | None:intergenic | 30.0% | |
| TGTATGGATCCATACATAAT+TGG | + | chr2_2:63482306-63482325 | Msa0263770:intron | 30.0% | |
| GAAAGACGAAATAGAAATGA+TGG | + | chr2_2:63482380-63482399 | Msa0263770:intron | 30.0% | |
| ATCGAAAAGAAGCAAATGAA+AGG | - | chr2_2:63482556-63482575 | None:intergenic | 30.0% | |
| ! | TTTCATTTGCTTCTTTTCGA+TGG | + | chr2_2:63482555-63482574 | Msa0263770:CDS | 30.0% |
| !!! | CGATGGAAGTTTTATTTTTC+CGG | + | chr2_2:63482572-63482591 | Msa0263770:CDS | 30.0% |
| CCAAAAATTAGGATCAATTC+CGG | - | chr2_2:63482594-63482613 | None:intergenic | 30.0% | |
| ! | AGATAGATCTTTTTGATCAG+AGG | - | chr2_2:63482646-63482665 | None:intergenic | 30.0% |
| CTGATCAAAAAGATCTATCT+TGG | + | chr2_2:63482646-63482665 | Msa0263770:CDS | 30.0% | |
| ATTGTACCATCCTAAAAGCA+AGG | - | chr2_2:63480688-63480707 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | + | chr2_2:63480967-63480986 | Msa0263770:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | - | chr2_2:63480995-63481014 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | + | chr2_2:63481167-63481186 | Msa0263770:intron | 35.0% |
| !!! | GTTCTCGTTATTTTTAGGGA+AGG | + | chr2_2:63481339-63481358 | Msa0263770:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | + | chr2_2:63481391-63481410 | Msa0263770:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | - | chr2_2:63481419-63481438 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | + | chr2_2:63481421-63481440 | Msa0263770:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | - | chr2_2:63481489-63481508 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | - | chr2_2:63481499-63481518 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | - | chr2_2:63481500-63481519 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | + | chr2_2:63481557-63481576 | Msa0263770:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | - | chr2_2:63481578-63481597 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | + | chr2_2:63481602-63481621 | Msa0263770:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | + | chr2_2:63481604-63481623 | Msa0263770:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | - | chr2_2:63481706-63481725 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | + | chr2_2:63481704-63481723 | Msa0263770:intron | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | + | chr2_2:63481706-63481725 | Msa0263770:intron | 35.0% |
| ! | TTTTACGTCAAGCAATACGT+GGG | + | chr2_2:63481979-63481998 | Msa0263770:CDS | 35.0% |
| !! | CTTGCTTTTACTGCTATATC+GGG | - | chr2_2:63482011-63482030 | None:intergenic | 35.0% |
| TTGTGTGGATCCTATTTCAA+CGG | - | chr2_2:63482063-63482082 | None:intergenic | 35.0% | |
| AAAGGAAGAGACTCATAGAA+TGG | + | chr2_2:63482208-63482227 | Msa0263770:CDS | 35.0% | |
| ! | ATTTTCGTTAATCCATGAGC+AGG | + | chr2_2:63482255-63482274 | Msa0263770:intron | 35.0% |
| ! | CCGGAATTGATCCTAATTTT+TGG | + | chr2_2:63482591-63482610 | Msa0263770:CDS | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | - | chr2_2:63480688-63480707 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | + | chr2_2:63480967-63480986 | Msa0263770:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | - | chr2_2:63480995-63481014 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | + | chr2_2:63481167-63481186 | Msa0263770:intron | 35.0% |
| !!! | GTTCTCGTTATTTTTAGGGA+AGG | + | chr2_2:63481339-63481358 | Msa0263770:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | + | chr2_2:63481391-63481410 | Msa0263770:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | - | chr2_2:63481419-63481438 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | + | chr2_2:63481421-63481440 | Msa0263770:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | - | chr2_2:63481489-63481508 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | - | chr2_2:63481499-63481518 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | - | chr2_2:63481500-63481519 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | + | chr2_2:63481557-63481576 | Msa0263770:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | - | chr2_2:63481578-63481597 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | + | chr2_2:63481602-63481621 | Msa0263770:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | + | chr2_2:63481604-63481623 | Msa0263770:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | - | chr2_2:63481706-63481725 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | + | chr2_2:63481704-63481723 | Msa0263770:intron | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | + | chr2_2:63481706-63481725 | Msa0263770:intron | 35.0% |
| ! | TTTTACGTCAAGCAATACGT+GGG | + | chr2_2:63481979-63481998 | Msa0263770:CDS | 35.0% |
| !! | CTTGCTTTTACTGCTATATC+GGG | - | chr2_2:63482011-63482030 | None:intergenic | 35.0% |
| TTGTGTGGATCCTATTTCAA+CGG | - | chr2_2:63482063-63482082 | None:intergenic | 35.0% | |
| AAAGGAAGAGACTCATAGAA+TGG | + | chr2_2:63482208-63482227 | Msa0263770:CDS | 35.0% | |
| ! | ATTTTCGTTAATCCATGAGC+AGG | + | chr2_2:63482255-63482274 | Msa0263770:intron | 35.0% |
| ! | CCGGAATTGATCCTAATTTT+TGG | + | chr2_2:63482591-63482610 | Msa0263770:CDS | 35.0% |
| TTTCTTGCGTGATGAACTGT+TGG | - | chr2_2:63480762-63480781 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | + | chr2_2:63480761-63480780 | Msa0263770:intron | 40.0% | |
| AGCGGGTATCTTTCACAAAA+AGG | + | chr2_2:63481096-63481115 | Msa0263770:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | - | chr2_2:63481125-63481144 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | - | chr2_2:63481146-63481165 | None:intergenic | 40.0% | |
| !!! | CGTTATTTTTAGGGAAGGAG+TGG | + | chr2_2:63481344-63481363 | Msa0263770:intron | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | - | chr2_2:63481498-63481517 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | - | chr2_2:63481509-63481528 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | - | chr2_2:63481519-63481538 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | - | chr2_2:63481549-63481568 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | + | chr2_2:63481563-63481582 | Msa0263770:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | + | chr2_2:63481605-63481624 | Msa0263770:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | - | chr2_2:63481647-63481666 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | + | chr2_2:63481650-63481669 | Msa0263770:CDS | 40.0% | |
| GCTTGACGTAAAACAGATAG+TGG | - | chr2_2:63481972-63481991 | None:intergenic | 40.0% | |
| ! | GTTTTACGTCAAGCAATACG+TGG | + | chr2_2:63481978-63481997 | Msa0263770:CDS | 40.0% |
| TTTACGTCAAGCAATACGTG+GGG | + | chr2_2:63481980-63481999 | Msa0263770:CDS | 40.0% | |
| GTAAAAGCAAGACGCGTAAA+CGG | + | chr2_2:63482020-63482039 | Msa0263770:CDS | 40.0% | |
| CATCAAGTTCCCGTTGAAAT+AGG | + | chr2_2:63482050-63482069 | Msa0263770:CDS | 40.0% | |
| TGTGTGGATCCTATTTCAAC+GGG | - | chr2_2:63482062-63482081 | None:intergenic | 40.0% | |
| GTTGAAATAGGATCCACACA+AGG | + | chr2_2:63482062-63482081 | Msa0263770:CDS | 40.0% | |
| ! | CTTGCCATTCGTTGGTTATT+AGG | + | chr2_2:63482092-63482111 | Msa0263770:intron | 40.0% |
| ! | TATTTCGACCTGGACGTTTT+CGG | - | chr2_2:63482124-63482143 | None:intergenic | 40.0% |
| AAAACGTCCAGGTCGAAATA+TGG | + | chr2_2:63482124-63482143 | Msa0263770:CDS | 40.0% | |
| TTGAAAGCCATATTTCGACC+TGG | - | chr2_2:63482134-63482153 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | - | chr2_2:63482165-63482184 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | + | chr2_2:63482165-63482184 | Msa0263770:CDS | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | - | chr2_2:63482201-63482220 | None:intergenic | 40.0% |
| GTGTATATAGATCCTGCTCA+TGG | - | chr2_2:63482270-63482289 | None:intergenic | 40.0% | |
| ! | ATGGCTCAACTAAGCACTTT+TGG | + | chr2_2:63482399-63482418 | Msa0263770:intron | 40.0% |
| ! | TGGCTCAACTAAGCACTTTT+GGG | + | chr2_2:63482400-63482419 | Msa0263770:intron | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | - | chr2_2:63480762-63480781 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | + | chr2_2:63480761-63480780 | Msa0263770:intron | 40.0% | |
| AGCGGGTATCTTTCACAAAA+AGG | + | chr2_2:63481096-63481115 | Msa0263770:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | - | chr2_2:63481125-63481144 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | - | chr2_2:63481146-63481165 | None:intergenic | 40.0% | |
| !!! | CGTTATTTTTAGGGAAGGAG+TGG | + | chr2_2:63481344-63481363 | Msa0263770:intron | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | - | chr2_2:63481498-63481517 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | - | chr2_2:63481509-63481528 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | - | chr2_2:63481519-63481538 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | - | chr2_2:63481549-63481568 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | + | chr2_2:63481563-63481582 | Msa0263770:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | + | chr2_2:63481605-63481624 | Msa0263770:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | - | chr2_2:63481647-63481666 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | + | chr2_2:63481650-63481669 | Msa0263770:CDS | 40.0% | |
| GCTTGACGTAAAACAGATAG+TGG | - | chr2_2:63481972-63481991 | None:intergenic | 40.0% | |
| ! | GTTTTACGTCAAGCAATACG+TGG | + | chr2_2:63481978-63481997 | Msa0263770:CDS | 40.0% |
| TTTACGTCAAGCAATACGTG+GGG | + | chr2_2:63481980-63481999 | Msa0263770:CDS | 40.0% | |
| GTAAAAGCAAGACGCGTAAA+CGG | + | chr2_2:63482020-63482039 | Msa0263770:CDS | 40.0% | |
| CATCAAGTTCCCGTTGAAAT+AGG | + | chr2_2:63482050-63482069 | Msa0263770:CDS | 40.0% | |
| TGTGTGGATCCTATTTCAAC+GGG | - | chr2_2:63482062-63482081 | None:intergenic | 40.0% | |
| GTTGAAATAGGATCCACACA+AGG | + | chr2_2:63482062-63482081 | Msa0263770:CDS | 40.0% | |
| ! | CTTGCCATTCGTTGGTTATT+AGG | + | chr2_2:63482092-63482111 | Msa0263770:intron | 40.0% |
| ! | TATTTCGACCTGGACGTTTT+CGG | - | chr2_2:63482124-63482143 | None:intergenic | 40.0% |
| AAAACGTCCAGGTCGAAATA+TGG | + | chr2_2:63482124-63482143 | Msa0263770:CDS | 40.0% | |
| TTGAAAGCCATATTTCGACC+TGG | - | chr2_2:63482134-63482153 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | - | chr2_2:63482165-63482184 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | + | chr2_2:63482165-63482184 | Msa0263770:CDS | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | - | chr2_2:63482201-63482220 | None:intergenic | 40.0% |
| GTGTATATAGATCCTGCTCA+TGG | - | chr2_2:63482270-63482289 | None:intergenic | 40.0% | |
| ! | ATGGCTCAACTAAGCACTTT+TGG | + | chr2_2:63482399-63482418 | Msa0263770:intron | 40.0% |
| ! | TGGCTCAACTAAGCACTTTT+GGG | + | chr2_2:63482400-63482419 | Msa0263770:intron | 40.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | + | chr2_2:63480675-63480694 | Msa0263770:CDS | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | + | chr2_2:63480679-63480698 | Msa0263770:CDS | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | - | chr2_2:63480685-63480704 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | - | chr2_2:63480733-63480752 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | - | chr2_2:63480734-63480753 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | - | chr2_2:63480735-63480754 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | + | chr2_2:63480734-63480753 | Msa0263770:CDS | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | + | chr2_2:63481200-63481219 | Msa0263770:intron | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | + | chr2_2:63481361-63481380 | Msa0263770:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | + | chr2_2:63481434-63481453 | Msa0263770:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | + | chr2_2:63481609-63481628 | Msa0263770:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | + | chr2_2:63481610-63481629 | Msa0263770:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | + | chr2_2:63481626-63481645 | Msa0263770:CDS | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | - | chr2_2:63481678-63481697 | None:intergenic | 45.0% | |
| ! | TCCCTTTTACGCTCATGTCA+CGG | + | chr2_2:63481784-63481803 | Msa0263770:intron | 45.0% |
| !! | GAAAAGCACTTGCCATTCGT+TGG | + | chr2_2:63482084-63482103 | Msa0263770:intron | 45.0% |
| TGCGCCTAATAACCAACGAA+TGG | - | chr2_2:63482099-63482118 | None:intergenic | 45.0% | |
| ! | ATTTCGACCTGGACGTTTTC+GGG | - | chr2_2:63482123-63482142 | None:intergenic | 45.0% |
| ! | GAATTAGTGGATGCTGCCAA+AGG | + | chr2_2:63482164-63482183 | Msa0263770:CDS | 45.0% |
| AGAGACTCATAGAATGGCAG+AGG | + | chr2_2:63482214-63482233 | Msa0263770:CDS | 45.0% | |
| ! | GGCTCAACTAAGCACTTTTG+GGG | + | chr2_2:63482401-63482420 | Msa0263770:intron | 45.0% |
| TCATGGGTTCTTCTCTCCAT+CGG | - | chr2_2:63482725-63482744 | None:intergenic | 45.0% | |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | + | chr2_2:63480675-63480694 | Msa0263770:CDS | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | + | chr2_2:63480679-63480698 | Msa0263770:CDS | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | - | chr2_2:63480685-63480704 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | - | chr2_2:63480733-63480752 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | - | chr2_2:63480734-63480753 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | - | chr2_2:63480735-63480754 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | + | chr2_2:63480734-63480753 | Msa0263770:CDS | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | + | chr2_2:63481200-63481219 | Msa0263770:intron | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | + | chr2_2:63481361-63481380 | Msa0263770:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | + | chr2_2:63481434-63481453 | Msa0263770:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | + | chr2_2:63481609-63481628 | Msa0263770:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | + | chr2_2:63481610-63481629 | Msa0263770:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | + | chr2_2:63481626-63481645 | Msa0263770:CDS | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | - | chr2_2:63481678-63481697 | None:intergenic | 45.0% | |
| ! | TCCCTTTTACGCTCATGTCA+CGG | + | chr2_2:63481784-63481803 | Msa0263770:intron | 45.0% |
| !! | GAAAAGCACTTGCCATTCGT+TGG | + | chr2_2:63482084-63482103 | Msa0263770:intron | 45.0% |
| TGCGCCTAATAACCAACGAA+TGG | - | chr2_2:63482099-63482118 | None:intergenic | 45.0% | |
| ! | ATTTCGACCTGGACGTTTTC+GGG | - | chr2_2:63482123-63482142 | None:intergenic | 45.0% |
| ! | GAATTAGTGGATGCTGCCAA+AGG | + | chr2_2:63482164-63482183 | Msa0263770:CDS | 45.0% |
| AGAGACTCATAGAATGGCAG+AGG | + | chr2_2:63482214-63482233 | Msa0263770:CDS | 45.0% | |
| ! | GGCTCAACTAAGCACTTTTG+GGG | + | chr2_2:63482401-63482420 | Msa0263770:intron | 45.0% |
| TCATGGGTTCTTCTCTCCAT+CGG | - | chr2_2:63482725-63482744 | None:intergenic | 45.0% | |
| AGATACCCGCTTTCGTGCTT+TGG | - | chr2_2:63481087-63481106 | None:intergenic | 50.0% | |
| ! | CTAAAGGGTGCATAACCGCA+TGG | + | chr2_2:63481128-63481147 | Msa0263770:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | + | chr2_2:63481403-63481422 | Msa0263770:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | + | chr2_2:63481442-63481461 | Msa0263770:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | - | chr2_2:63481534-63481553 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | + | chr2_2:63481616-63481635 | Msa0263770:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | - | chr2_2:63481679-63481698 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | + | chr2_2:63481676-63481695 | Msa0263770:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | + | chr2_2:63481689-63481708 | Msa0263770:CDS | 50.0% | |
| GCCGTGACATGAGCGTAAAA+GGG | - | chr2_2:63481788-63481807 | None:intergenic | 50.0% | |
| ! | GGCAAGTGCTTTTCCTTGTG+TGG | - | chr2_2:63482078-63482097 | None:intergenic | 50.0% |
| TATGGCATCGCCATTCCCTT+TGG | - | chr2_2:63482183-63482202 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | + | chr2_2:63482190-63482209 | Msa0263770:CDS | 50.0% | |
| AGATACCCGCTTTCGTGCTT+TGG | - | chr2_2:63481087-63481106 | None:intergenic | 50.0% | |
| ! | CTAAAGGGTGCATAACCGCA+TGG | + | chr2_2:63481128-63481147 | Msa0263770:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | + | chr2_2:63481403-63481422 | Msa0263770:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | + | chr2_2:63481442-63481461 | Msa0263770:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | - | chr2_2:63481534-63481553 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | + | chr2_2:63481616-63481635 | Msa0263770:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | - | chr2_2:63481679-63481698 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | + | chr2_2:63481676-63481695 | Msa0263770:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | + | chr2_2:63481689-63481708 | Msa0263770:CDS | 50.0% | |
| GCCGTGACATGAGCGTAAAA+GGG | - | chr2_2:63481788-63481807 | None:intergenic | 50.0% | |
| ! | GGCAAGTGCTTTTCCTTGTG+TGG | - | chr2_2:63482078-63482097 | None:intergenic | 50.0% |
| TATGGCATCGCCATTCCCTT+TGG | - | chr2_2:63482183-63482202 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | + | chr2_2:63482190-63482209 | Msa0263770:CDS | 50.0% | |
| GACCCACCAAAGCACGAAAG+CGG | + | chr2_2:63481078-63481097 | Msa0263770:CDS | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | + | chr2_2:63481079-63481098 | Msa0263770:CDS | 55.0% | |
| ACCCGCTTTCGTGCTTTGGT+GGG | - | chr2_2:63481083-63481102 | None:intergenic | 55.0% | |
| TACCCGCTTTCGTGCTTTGG+TGG | - | chr2_2:63481084-63481103 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | + | chr2_2:63481530-63481549 | Msa0263770:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | + | chr2_2:63481668-63481687 | Msa0263770:CDS | 55.0% | |
| CGCCGTGACATGAGCGTAAA+AGG | - | chr2_2:63481789-63481808 | None:intergenic | 55.0% | |
| TTTACGCTCATGTCACGGCG+AGG | + | chr2_2:63481789-63481808 | Msa0263770:intron | 55.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | + | chr2_2:63482170-63482189 | Msa0263770:CDS | 55.0% | |
| TAACGGCGCTGTTGTTCCGA+TGG | + | chr2_2:63482706-63482725 | Msa0263770:CDS | 55.0% | |
| GACCCACCAAAGCACGAAAG+CGG | + | chr2_2:63481078-63481097 | Msa0263770:CDS | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | + | chr2_2:63481079-63481098 | Msa0263770:CDS | 55.0% | |
| ACCCGCTTTCGTGCTTTGGT+GGG | - | chr2_2:63481083-63481102 | None:intergenic | 55.0% | |
| TACCCGCTTTCGTGCTTTGG+TGG | - | chr2_2:63481084-63481103 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | + | chr2_2:63481530-63481549 | Msa0263770:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | + | chr2_2:63481668-63481687 | Msa0263770:CDS | 55.0% | |
| CGCCGTGACATGAGCGTAAA+AGG | - | chr2_2:63481789-63481808 | None:intergenic | 55.0% | |
| TTTACGCTCATGTCACGGCG+AGG | + | chr2_2:63481789-63481808 | Msa0263770:intron | 55.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | + | chr2_2:63482170-63482189 | Msa0263770:CDS | 55.0% | |
| TAACGGCGCTGTTGTTCCGA+TGG | + | chr2_2:63482706-63482725 | Msa0263770:CDS | 55.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | - | chr2_2:63480711-63480730 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | - | chr2_2:63480728-63480747 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | + | chr2_2:63480726-63480745 | Msa0263770:CDS | 60.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | - | chr2_2:63480711-63480730 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | - | chr2_2:63480728-63480747 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | + | chr2_2:63480726-63480745 | Msa0263770:CDS | 60.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | - | chr2_2:63480721-63480740 | None:intergenic | 65.0% | |
| GGCGCATCCCGAAAACGTCC+AGG | + | chr2_2:63482113-63482132 | Msa0263770:intron | 65.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | - | chr2_2:63480721-63480740 | None:intergenic | 65.0% | |
| GGCGCATCCCGAAAACGTCC+AGG | + | chr2_2:63482113-63482132 | Msa0263770:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 63480660 | 63482746 | 63480660 | ID=Msa0263770;Name=Msa0263770 |
| chr2_2 | mRNA | 63480660 | 63482746 | 63480660 | ID=Msa0263770-mRNA-1;Parent=Msa0263770;Name=Msa0263770-mRNA-1;_AED=0.27;_eAED=0.31;_QI=0|0|0|1|0|0.16|6|0|273 |
| chr2_2 | exon | 63480660 | 63480764 | 63480660 | ID=Msa0263770-mRNA-1:exon:19673;Parent=Msa0263770-mRNA-1 |
| chr2_2 | exon | 63481058 | 63481100 | 63481058 | ID=Msa0263770-mRNA-1:exon:19674;Parent=Msa0263770-mRNA-1 |
| chr2_2 | exon | 63481618 | 63481710 | 63481618 | ID=Msa0263770-mRNA-1:exon:19675;Parent=Msa0263770-mRNA-1 |
| chr2_2 | exon | 63481865 | 63482101 | 63481865 | ID=Msa0263770-mRNA-1:exon:19676;Parent=Msa0263770-mRNA-1 |
| chr2_2 | exon | 63482114 | 63482260 | 63482114 | ID=Msa0263770-mRNA-1:exon:19677;Parent=Msa0263770-mRNA-1 |
| chr2_2 | exon | 63482553 | 63482746 | 63482553 | ID=Msa0263770-mRNA-1:exon:19678;Parent=Msa0263770-mRNA-1 |
| chr2_2 | CDS | 63480660 | 63480764 | 63480660 | ID=Msa0263770-mRNA-1:cds;Parent=Msa0263770-mRNA-1 |
| chr2_2 | CDS | 63481058 | 63481100 | 63481058 | ID=Msa0263770-mRNA-1:cds;Parent=Msa0263770-mRNA-1 |
| chr2_2 | CDS | 63481618 | 63481710 | 63481618 | ID=Msa0263770-mRNA-1:cds;Parent=Msa0263770-mRNA-1 |
| chr2_2 | CDS | 63481865 | 63482101 | 63481865 | ID=Msa0263770-mRNA-1:cds;Parent=Msa0263770-mRNA-1 |
| chr2_2 | CDS | 63482114 | 63482260 | 63482114 | ID=Msa0263770-mRNA-1:cds;Parent=Msa0263770-mRNA-1 |
| chr2_2 | CDS | 63482553 | 63482746 | 63482553 | ID=Msa0263770-mRNA-1:cds;Parent=Msa0263770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
