Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354740 | BBN70062.1 | 96.717 | 396 | 11 | 1 | 1 | 394 | 86 | 481 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354740 | sp|P0CC61|NU2C2_EUCGG | 94.416 | 394 | 15 | 1 | 1 | 394 | 124 | 510 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354740 | A0A5H2XTJ1 | 96.717 | 396 | 11 | 1 | 1 | 394 | 86 | 481 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095150 | Msa1354740 | 0.822759 | 1.995010e-53 | -8.615850e-47 |
| Msa0095190 | Msa1354740 | 0.813931 | 1.993431e-51 | -8.615850e-47 |
| Msa0095230 | Msa1354740 | 0.802650 | 5.072890e-49 | -8.615850e-47 |
| Msa0095280 | Msa1354740 | 0.805102 | 1.569352e-49 | -8.615850e-47 |
| Msa1354420 | Msa1354740 | 0.870806 | 1.104589e-66 | -8.615850e-47 |
| Msa1354430 | Msa1354740 | 0.894075 | 3.468378e-75 | -8.615850e-47 |
| Msa1354480 | Msa1354740 | 0.940315 | 2.880746e-100 | -8.615850e-47 |
| Msa1354490 | Msa1354740 | 0.873974 | 9.699413e-68 | -8.615850e-47 |
| Msa1354500 | Msa1354740 | 0.864427 | 1.225503e-64 | -8.615850e-47 |
| Msa1354550 | Msa1354740 | 0.886463 | 3.345437e-72 | -8.615850e-47 |
| Msa1354560 | Msa1354740 | 0.877616 | 5.449118e-69 | -8.615850e-47 |
| Msa1354610 | Msa1354740 | 0.942455 | 6.975746e-102 | -8.615850e-47 |
| Msa1354620 | Msa1354740 | 0.864750 | 9.711250e-65 | -8.615850e-47 |
| Msa1354630 | Msa1354740 | 0.876745 | 1.093528e-68 | -8.615850e-47 |
| Msa1354680 | Msa1354740 | 0.849920 | 2.372454e-60 | -8.615850e-47 |
| Msa1354690 | Msa1354740 | 0.837251 | 5.804615e-57 | -8.615850e-47 |
| Msa1354700 | Msa1354740 | 0.895301 | 1.091128e-75 | -8.615850e-47 |
| Msa1354740 | Msa1354750 | 0.862355 | 5.376074e-64 | -8.615850e-47 |
| Msa1354740 | Msa1354760 | 0.861917 | 7.321037e-64 | -8.615850e-47 |
| Msa1354740 | Msa1354810 | 0.887674 | 1.159468e-72 | -8.615850e-47 |
| Msa1354740 | Msa1354820 | 0.896721 | 2.810968e-76 | -8.615850e-47 |
| Msa1354740 | Msa1354900 | 0.801123 | 1.044578e-48 | -8.615850e-47 |
| Msa1354740 | Msa1354910 | 0.815019 | 1.145461e-51 | -8.615850e-47 |
| Msa1354740 | Msa1354920 | 0.850309 | 1.846191e-60 | -8.615850e-47 |
| Msa1354740 | Msa1354930 | 0.812679 | 3.755007e-51 | -8.615850e-47 |
| Msa1354740 | Msa1354980 | 0.884299 | 2.159576e-71 | -8.615850e-47 |
| Msa1354740 | Msa1354990 | 0.893604 | 5.384314e-75 | -8.615850e-47 |
| Msa1354740 | Msa1355030 | 0.800062 | 1.718568e-48 | -8.615850e-47 |
| Msa1354740 | Msa1355050 | 0.802203 | 6.272467e-49 | -8.615850e-47 |
| Msa1354740 | Msa1355070 | 0.801366 | 9.313689e-49 | -8.615850e-47 |
| Msa1354740 | Msa1355080 | 0.828245 | 1.000558e-54 | -8.615850e-47 |
| Msa1354740 | Msa1355090 | 0.835408 | 1.707332e-56 | -8.615850e-47 |
| Msa1354740 | Msa1355100 | 0.824778 | 6.711674e-54 | -8.615850e-47 |
| Msa1354740 | Msa1365890 | 0.862062 | 6.611712e-64 | -8.615850e-47 |
| Msa1354740 | Msa1365900 | 0.843942 | 1.027014e-58 | -8.615850e-47 |
| Msa1354740 | Msa1365950 | 0.892316 | 1.776803e-74 | -8.615850e-47 |
| Msa1354740 | Msa1365960 | 0.847190 | 1.352880e-59 | -8.615850e-47 |
| Msa1354740 | Msa1365970 | 0.857816 | 1.261352e-62 | -8.615850e-47 |
| Msa1354740 | Msa1366080 | 0.870615 | 1.276290e-66 | -8.615850e-47 |
| Msa1354740 | Msa1366090 | 0.858683 | 6.959639e-63 | -8.615850e-47 |
| Msa1354740 | Msa1368230 | 0.852971 | 3.251599e-61 | -8.615850e-47 |
| Msa1354740 | Msa1368240 | 0.850120 | 2.085347e-60 | -8.615850e-47 |
| Msa1354740 | Msa1380590 | 0.815601 | 8.504778e-52 | -8.615850e-47 |
| Msa1354740 | Msa1380600 | 0.811931 | 5.469090e-51 | -8.615850e-47 |
| Msa1354740 | Msa1380610 | 0.830964 | 2.182216e-55 | -8.615850e-47 |
| Msa1354740 | Msa1380620 | 0.835928 | 1.261168e-56 | -8.615850e-47 |
| Msa1354740 | Msa1380690 | 0.800790 | 1.221886e-48 | -8.615850e-47 |
| Msa1354740 | Msa1385410 | 0.846873 | 1.652408e-59 | -8.615850e-47 |
| Msa1354740 | Msa1385420 | 0.858048 | 1.076518e-62 | -8.615850e-47 |
| Msa1354740 | Msa1391090 | 0.892446 | 1.575095e-74 | -8.615850e-47 |
| Msa1354740 | Msa1391100 | 0.864370 | 1.276440e-64 | -8.615850e-47 |
| Msa1354740 | Msa1391110 | 0.858237 | 9.457479e-63 | -8.615850e-47 |
| Msa1354740 | Msa1391160 | 0.858544 | 7.658672e-63 | -8.615850e-47 |
| Msa1354740 | Msa1391170 | 0.876913 | 9.564667e-69 | -8.615850e-47 |
| Msa1354740 | Msa1391220 | 0.897600 | 1.201479e-76 | -8.615850e-47 |
| Msa1354740 | Msa1391230 | 0.837114 | 6.289904e-57 | -8.615850e-47 |
| Msa1354740 | Msa1391240 | 0.865644 | 5.083887e-65 | -8.615850e-47 |
| Msa1354740 | Msa1394030 | 0.843520 | 1.331932e-58 | -8.615850e-47 |
| Msa1354740 | Msa1394040 | 0.849266 | 3.611664e-60 | -8.615850e-47 |
| Msa1354740 | Msa1394060 | 0.811624 | 6.379676e-51 | -8.615850e-47 |
| Msa1354740 | Msa1394150 | 0.843009 | 1.823466e-58 | -8.615850e-47 |
| Msa1354740 | Msa1394160 | 0.841896 | 3.596994e-58 | -8.615850e-47 |
| Msa1354740 | Msa1394210 | 0.841092 | 5.858435e-58 | -8.615850e-47 |
| Msa1354740 | Msa1394220 | 0.800041 | 1.735851e-48 | -8.615850e-47 |
| Msa1354740 | Msa1394230 | 0.824470 | 7.933647e-54 | -8.615850e-47 |
| Msa1354740 | Msa1394250 | 0.819605 | 1.063778e-52 | -8.615850e-47 |
| Msa1354740 | Msa1460120 | 0.850741 | 1.395844e-60 | -8.615850e-47 |
| Msa1354740 | Msa1460130 | 0.853560 | 2.205032e-61 | -8.615850e-47 |
| Msa0611450 | Msa1354740 | 0.802444 | 5.595328e-49 | -8.615850e-47 |
| Msa0139800 | Msa1354740 | 0.807133 | 5.865916e-50 | -8.615850e-47 |
| Msa0139810 | Msa1354740 | 0.808427 | 3.113950e-50 | -8.615850e-47 |
| Msa0202640 | Msa1354740 | 0.845305 | 4.412931e-59 | -8.615850e-47 |
| Msa0221840 | Msa1354740 | 0.806280 | 8.882458e-50 | -8.615850e-47 |
| Msa1305090 | Msa1354740 | 0.833007 | 6.830150e-56 | -8.615850e-47 |
| Msa0370210 | Msa1354740 | 0.816393 | 5.661020e-52 | -8.615850e-47 |
| Msa0405420 | Msa1354740 | 0.877988 | 4.038459e-69 | -8.615850e-47 |
| Msa0405430 | Msa1354740 | 0.830340 | 3.103072e-55 | -8.615850e-47 |
| Msa0405440 | Msa1354740 | 0.847726 | 9.637934e-60 | -8.615850e-47 |
| Msa0405510 | Msa1354740 | 0.898890 | 3.403242e-77 | -8.615850e-47 |
| Msa0405520 | Msa1354740 | 0.818510 | 1.888315e-52 | -8.615850e-47 |
| Msa0405530 | Msa1354740 | 0.862686 | 4.251554e-64 | -8.615850e-47 |
| Msa0983630 | Msa1354740 | 0.873172 | 1.806364e-67 | -8.615850e-47 |
| Msa0983640 | Msa1354740 | 0.876460 | 1.371954e-68 | -8.615850e-47 |
| Msa0983720 | Msa1354740 | 0.815138 | 1.077678e-51 | -8.615850e-47 |
| Msa1022050 | Msa1354740 | 0.870444 | 1.452758e-66 | -8.615850e-47 |
| Msa1022060 | Msa1354740 | 0.871947 | 4.634605e-67 | -8.615850e-47 |
| Msa1064410 | Msa1354740 | 0.847597 | 1.045856e-59 | -8.615850e-47 |
| Msa1086070 | Msa1354740 | 0.808940 | 2.419598e-50 | -8.615850e-47 |
| Msa1086080 | Msa1354740 | 0.837898 | 3.959756e-57 | -8.615850e-47 |
| Msa1086090 | Msa1354740 | 0.844233 | 8.583707e-59 | -8.615850e-47 |
| Msa1086100 | Msa1354740 | 0.824969 | 6.051920e-54 | -8.615850e-47 |
| Msa1086140 | Msa1354740 | 0.856900 | 2.353132e-62 | -8.615850e-47 |
| Msa1086150 | Msa1354740 | 0.810843 | 9.422250e-51 | -8.615850e-47 |
| Msa1086180 | Msa1354740 | 0.812780 | 3.568344e-51 | -8.615850e-47 |
| Msa1086190 | Msa1354740 | 0.831471 | 1.638316e-55 | -8.615850e-47 |
| Msa1086200 | Msa1354740 | 0.855093 | 7.950159e-62 | -8.615850e-47 |
| Msa1086210 | Msa1354740 | 0.811459 | 6.927540e-51 | -8.615850e-47 |
| Msa1086250 | Msa1354740 | 0.826756 | 2.277575e-54 | -8.615850e-47 |
| Msa1086270 | Msa1354740 | 0.840514 | 8.307666e-58 | -8.615850e-47 |
| Msa1086280 | Msa1354740 | 0.820334 | 7.246940e-53 | -8.615850e-47 |
| Msa1086300 | Msa1354740 | 0.811791 | 5.868119e-51 | -8.615850e-47 |
| Msa1086320 | Msa1354740 | 0.802848 | 4.618082e-49 | -8.615850e-47 |
| Msa1086380 | Msa1354740 | 0.816750 | 4.706756e-52 | -8.615850e-47 |
| Msa1086430 | Msa1354740 | 0.800278 | 1.553692e-48 | -8.615850e-47 |
| Msa1086450 | Msa1354740 | 0.829406 | 5.240149e-55 | -8.615850e-47 |
| Msa1086470 | Msa1354740 | 0.824487 | 7.862126e-54 | -8.615850e-47 |
| Msa1086510 | Msa1354740 | 0.805411 | 1.352184e-49 | -8.615850e-47 |
| Msa1086550 | Msa1354740 | 0.908659 | 1.342871e-81 | -8.615850e-47 |
| Msa1086590 | Msa1354740 | 0.837420 | 5.254336e-57 | -8.615850e-47 |
| Msa1086600 | Msa1354740 | 0.886125 | 4.490578e-72 | -8.615850e-47 |
| Msa1086660 | Msa1354740 | 0.809071 | 2.267729e-50 | -8.615850e-47 |
| Msa1086680 | Msa1354740 | 0.805274 | 1.444700e-49 | -8.615850e-47 |
| Msa1086720 | Msa1354740 | 0.922704 | 6.951431e-89 | -8.615850e-47 |
| Msa1086730 | Msa1354740 | 0.868252 | 7.496058e-66 | -8.615850e-47 |
| Msa1086740 | Msa1354740 | 0.860095 | 2.623038e-63 | -8.615850e-47 |
| Msa1086790 | Msa1354740 | 0.874224 | 7.981274e-68 | -8.615850e-47 |
| Msa1086800 | Msa1354740 | 0.900385 | 7.726368e-78 | -8.615850e-47 |
| Msa1086860 | Msa1354740 | 0.806536 | 7.841808e-50 | -8.615850e-47 |
| Msa1086880 | Msa1354740 | 0.814013 | 1.912198e-51 | -8.615850e-47 |
| Msa1086890 | Msa1354740 | 0.839736 | 1.325493e-57 | -8.615850e-47 |
| Msa1086900 | Msa1354740 | 0.845834 | 3.172251e-59 | -8.615850e-47 |
| Msa1086910 | Msa1354740 | 0.828121 | 1.071916e-54 | -8.615850e-47 |
| Msa1086960 | Msa1354740 | 0.894764 | 1.813372e-75 | -8.615850e-47 |
| Msa1086970 | Msa1354740 | 0.872324 | 3.471768e-67 | -8.615850e-47 |
| Msa1087030 | Msa1354740 | 0.921699 | 2.558279e-88 | -8.615850e-47 |
| Msa1087040 | Msa1354740 | 0.861084 | 1.314681e-63 | -8.615850e-47 |
| Msa1087050 | Msa1354740 | 0.862371 | 5.312649e-64 | -8.615850e-47 |
| Msa1087110 | Msa1354740 | 0.888802 | 4.273885e-73 | -8.615850e-47 |
| Msa1087120 | Msa1354740 | 0.901024 | 4.069566e-78 | -8.615850e-47 |
| Msa0263770 | Msa1354740 | 0.855463 | 6.202905e-62 | -8.615850e-47 |
| Msa0268170 | Msa1354740 | 0.816953 | 4.238367e-52 | -8.615850e-47 |
| Msa0268190 | Msa1354740 | 0.822360 | 2.470180e-53 | -8.615850e-47 |
| Msa0268210 | Msa1354740 | 0.812402 | 4.316893e-51 | -8.615850e-47 |
| Msa0268250 | Msa1354740 | 0.891776 | 2.916467e-74 | -8.615850e-47 |
| Msa0268260 | Msa1354740 | 0.841534 | 4.481725e-58 | -8.615850e-47 |
| Msa0268270 | Msa1354740 | 0.865097 | 7.561898e-65 | -8.615850e-47 |
| Msa0268300 | Msa1354740 | 0.865521 | 5.561283e-65 | -8.615850e-47 |
| Msa0268310 | Msa1354740 | 0.877565 | 5.676013e-69 | -8.615850e-47 |
| Msa0268390 | Msa1354740 | 0.820606 | 6.275413e-53 | -8.615850e-47 |
| Msa0268400 | Msa1354740 | 0.803386 | 3.572994e-49 | -8.615850e-47 |
| Msa0268410 | Msa1354740 | 0.826958 | 2.038921e-54 | -8.615850e-47 |
| Msa0268430 | Msa1354740 | 0.826906 | 2.097268e-54 | -8.615850e-47 |
| Msa0268450 | Msa1354740 | 0.812125 | 4.962254e-51 | -8.615850e-47 |
| Msa0268550 | Msa1354740 | 0.821780 | 3.365191e-53 | -8.615850e-47 |
| Msa0268560 | Msa1354740 | 0.817243 | 3.648332e-52 | -8.615850e-47 |
| Msa0268570 | Msa1354740 | 0.840573 | 8.014038e-58 | -8.615850e-47 |
| Msa0268580 | Msa1354740 | 0.849242 | 3.666138e-60 | -8.615850e-47 |
| Msa0268630 | Msa1354740 | 0.841950 | 3.481382e-58 | -8.615850e-47 |
| Msa0268640 | Msa1354740 | 0.809814 | 1.571301e-50 | -8.615850e-47 |
| Msa0268670 | Msa1354740 | 0.807415 | 5.110883e-50 | -8.615850e-47 |
| Msa0268720 | Msa1354740 | 0.807433 | 5.067148e-50 | -8.615850e-47 |
| Msa0268740 | Msa1354740 | 0.835297 | 1.821010e-56 | -8.615850e-47 |
| Msa0268750 | Msa1354740 | 0.849775 | 2.603382e-60 | -8.615850e-47 |
| Msa0268760 | Msa1354740 | 0.804185 | 2.438645e-49 | -8.615850e-47 |
| Msa0268830 | Msa1354740 | 0.854859 | 9.293659e-62 | -8.615850e-47 |
| Msa0268840 | Msa1354740 | 0.808022 | 3.799061e-50 | -8.615850e-47 |
| Msa0268860 | Msa1354740 | 0.826766 | 2.264971e-54 | -8.615850e-47 |
| Msa0268880 | Msa1354740 | 0.806050 | 9.930706e-50 | -8.615850e-47 |
| Msa0268940 | Msa1354740 | 0.810090 | 1.370255e-50 | -8.615850e-47 |
| Msa0268950 | Msa1354740 | 0.829668 | 4.525835e-55 | -8.615850e-47 |
| Msa0268960 | Msa1354740 | 0.857886 | 1.202546e-62 | -8.615850e-47 |
| Msa0269040 | Msa1354740 | 0.851701 | 7.479014e-61 | -8.615850e-47 |
| Msa0269050 | Msa1354740 | 0.822536 | 2.248202e-53 | -8.615850e-47 |
| Msa0269070 | Msa1354740 | 0.831373 | 1.731701e-55 | -8.615850e-47 |
| Msa0269090 | Msa1354740 | 0.804187 | 2.436880e-49 | -8.615850e-47 |
| Msa0269130 | Msa1354740 | 0.902533 | 8.795229e-79 | -8.615850e-47 |
| Msa0269140 | Msa1354740 | 0.871664 | 5.752520e-67 | -8.615850e-47 |
| Msa0269150 | Msa1354740 | 0.869778 | 2.399088e-66 | -8.615850e-47 |
| Msa0344180 | Msa1354740 | 0.824220 | 9.082253e-54 | -8.615850e-47 |
| Msa0344190 | Msa1354740 | 0.847887 | 8.699044e-60 | -8.615850e-47 |
| Msa0344300 | Msa1354740 | 0.804647 | 1.953867e-49 | -8.615850e-47 |
| Msa0344310 | Msa1354740 | 0.838687 | 2.480451e-57 | -8.615850e-47 |
| Msa1143120 | Msa1354740 | 0.835428 | 1.688176e-56 | -8.615850e-47 |
| Msa1143130 | Msa1354740 | 0.800083 | 1.701828e-48 | -8.615850e-47 |
| Msa1143160 | Msa1354740 | 0.825473 | 4.599290e-54 | -8.615850e-47 |
| Msa1143170 | Msa1354740 | 0.844031 | 9.724652e-59 | -8.615850e-47 |
| Msa1143180 | Msa1354740 | 0.812634 | 3.841385e-51 | -8.615850e-47 |
| Msa0484040 | Msa1354740 | 0.803972 | 2.700191e-49 | -8.615850e-47 |
| Msa0582510 | Msa1354740 | 0.850577 | 1.551803e-60 | -8.615850e-47 |
| Msa0582520 | Msa1354740 | 0.815075 | 1.113000e-51 | -8.615850e-47 |
| Msa0582540 | Msa1354740 | 0.810776 | 9.742172e-51 | -8.615850e-47 |
| Msa0582610 | Msa1354740 | 0.800639 | 1.311590e-48 | -8.615850e-47 |
| Msa0582630 | Msa1354740 | 0.822968 | 1.783348e-53 | -8.615850e-47 |
| Msa0582640 | Msa1354740 | 0.828103 | 1.082959e-54 | -8.615850e-47 |
| Msa0582650 | Msa1354740 | 0.847680 | 9.924004e-60 | -8.615850e-47 |
| Msa0582660 | Msa1354740 | 0.818473 | 1.924428e-52 | -8.615850e-47 |
| Msa0582690 | Msa1354740 | 0.853802 | 1.878586e-61 | -8.615850e-47 |
| Msa0582700 | Msa1354740 | 0.823699 | 1.203390e-53 | -8.615850e-47 |
| Msa0582720 | Msa1354740 | 0.807337 | 5.308916e-50 | -8.615850e-47 |
| Msa0582730 | Msa1354740 | 0.816068 | 6.690772e-52 | -8.615850e-47 |
| Msa0582750 | Msa1354740 | 0.812909 | 3.344398e-51 | -8.615850e-47 |
| Msa0582760 | Msa1354740 | 0.836597 | 8.523797e-57 | -8.615850e-47 |
| Msa0582770 | Msa1354740 | 0.841814 | 3.781183e-58 | -8.615850e-47 |
| Msa0582780 | Msa1354740 | 0.837932 | 3.881214e-57 | -8.615850e-47 |
| Msa0582810 | Msa1354740 | 0.859240 | 4.741770e-63 | -8.615850e-47 |
| Msa0582820 | Msa1354740 | 0.809006 | 2.342322e-50 | -8.615850e-47 |
| Msa0582840 | Msa1354740 | 0.805421 | 1.346085e-49 | -8.615850e-47 |
| Msa0582860 | Msa1354740 | 0.801623 | 8.251517e-49 | -8.615850e-47 |
| Msa0582910 | Msa1354740 | 0.830547 | 2.762405e-55 | -8.615850e-47 |
| Msa0582920 | Msa1354740 | 0.851456 | 8.769558e-61 | -8.615850e-47 |
| Msa0582930 | Msa1354740 | 0.818753 | 1.662632e-52 | -8.615850e-47 |
| Msa0591290 | Msa1354740 | 0.813734 | 2.203149e-51 | -8.615850e-47 |
| Msa0591310 | Msa1354740 | 0.891969 | 2.443266e-74 | -8.615850e-47 |
| Msa0591350 | Msa1354740 | 0.860322 | 2.240018e-63 | -8.615850e-47 |
| Msa0591360 | Msa1354740 | 0.863420 | 2.521005e-64 | -8.615850e-47 |
| Msa0591380 | Msa1354740 | 0.838046 | 3.627449e-57 | -8.615850e-47 |
| Msa0867680 | Msa1354740 | 0.863723 | 2.030987e-64 | -8.615850e-47 |
| Msa0867690 | Msa1354740 | 0.861995 | 6.933550e-64 | -8.615850e-47 |
| Msa0876520 | Msa1354740 | 0.828024 | 1.131247e-54 | -8.615850e-47 |
| Msa0908220 | Msa1354740 | 0.905418 | 4.383149e-80 | -8.615850e-47 |
| Msa0908230 | Msa1354740 | 0.853885 | 1.777313e-61 | -8.615850e-47 |
| Msa0908240 | Msa1354740 | 0.846773 | 1.759112e-59 | -8.615850e-47 |
| Msa0908310 | Msa1354740 | 0.898424 | 5.376752e-77 | -8.615850e-47 |
| Msa0908320 | Msa1354740 | 0.917800 | 3.410822e-86 | -8.615850e-47 |
| Msa0908370 | Msa1354740 | 0.882350 | 1.121862e-70 | -8.615850e-47 |
| Msa0908380 | Msa1354740 | 0.867548 | 1.262133e-65 | -8.615850e-47 |
| Msa0908430 | Msa1354740 | 0.918034 | 2.561836e-86 | -8.615850e-47 |
| Msa0908440 | Msa1354740 | 0.860060 | 2.687874e-63 | -8.615850e-47 |
| Msa0908450 | Msa1354740 | 0.876225 | 1.653792e-68 | -8.615850e-47 |
| Msa0908480 | Msa1354740 | 0.839428 | 1.593716e-57 | -8.615850e-47 |
| Msa0908530 | Msa1354740 | 0.896939 | 2.277388e-76 | -8.615850e-47 |
| Msa0908540 | Msa1354740 | 0.898759 | 3.873053e-77 | -8.615850e-47 |
| Msa0908590 | Msa1354740 | 0.893251 | 7.478465e-75 | -8.615850e-47 |
| Msa0908600 | Msa1354740 | 0.838736 | 2.408991e-57 | -8.615850e-47 |
| Msa0908610 | Msa1354740 | 0.837042 | 6.562451e-57 | -8.615850e-47 |
| Msa0908650 | Msa1354740 | 0.913108 | 9.011949e-84 | -8.615850e-47 |
| Msa0908660 | Msa1354740 | 0.853455 | 2.362227e-61 | -8.615850e-47 |
| Msa0908670 | Msa1354740 | 0.878550 | 2.564870e-69 | -8.615850e-47 |
| Msa0908720 | Msa1354740 | 0.887036 | 2.029050e-72 | -8.615850e-47 |
| Msa0908730 | Msa1354740 | 0.891354 | 4.287416e-74 | -8.615850e-47 |
| Msa0911190 | Msa1354740 | 0.840473 | 8.513393e-58 | -8.615850e-47 |
| Msa0911200 | Msa1354740 | 0.855400 | 6.473465e-62 | -8.615850e-47 |
| Msa0911230 | Msa1354740 | 0.836132 | 1.119545e-56 | -8.615850e-47 |
| Msa0924830 | Msa1354740 | 0.820788 | 5.700785e-53 | -8.615850e-47 |
| Msa0924850 | Msa1354740 | 0.811837 | 5.731742e-51 | -8.615850e-47 |
| Msa0924870 | Msa1354740 | 0.834567 | 2.781278e-56 | -8.615850e-47 |
| Msa0924880 | Msa1354740 | 0.834756 | 2.493517e-56 | -8.615850e-47 |
| Msa0924930 | Msa1354740 | 0.852676 | 3.949402e-61 | -8.615850e-47 |
| Msa0924940 | Msa1354740 | 0.883663 | 3.707601e-71 | -8.615850e-47 |
| Msa0924990 | Msa1354740 | 0.806919 | 6.509489e-50 | -8.615850e-47 |
| Msa0925040 | Msa1354740 | 0.804769 | 1.842178e-49 | -8.615850e-47 |
| Msa0925100 | Msa1354740 | 0.870477 | 1.416589e-66 | -8.615850e-47 |
| Msa0925110 | Msa1354740 | 0.887859 | 9.854964e-73 | -8.615850e-47 |
| Msa0931070 | Msa1354740 | 0.841443 | 4.737410e-58 | -8.615850e-47 |
| Msa0931080 | Msa1354740 | 0.812027 | 5.212666e-51 | -8.615850e-47 |
| Msa0931110 | Msa1354740 | 0.812939 | 3.293784e-51 | -8.615850e-47 |
| Msa0931130 | Msa1354740 | 0.851720 | 7.384309e-61 | -8.615850e-47 |
| Msa0931160 | Msa1354740 | 0.806102 | 9.681866e-50 | -8.615850e-47 |
| Msa0931220 | Msa1354740 | 0.839853 | 1.235530e-57 | -8.615850e-47 |
| Msa0931230 | Msa1354740 | 0.837260 | 5.771325e-57 | -8.615850e-47 |
| Msa0931240 | Msa1354740 | 0.810785 | 9.696669e-51 | -8.615850e-47 |
| Msa0931260 | Msa1354740 | 0.860563 | 1.892749e-63 | -8.615850e-47 |
| Msa0931270 | Msa1354740 | 0.825809 | 3.828004e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354740 | MtrunA17_CPg0492451 | 99.020 | 204 | 2 | 0 | 191 | 394 | 1 | 204 | 1.20e-144 | 409 |
| Msa1354740 | MtrunA17_Chr4g0016071 | 99.020 | 204 | 2 | 0 | 191 | 394 | 1 | 204 | 1.20e-144 | 409 |
| Msa1354740 | MtrunA17_Chr3g0090871 | 91.667 | 204 | 2 | 1 | 191 | 394 | 1 | 189 | 6.59e-127 | 363 |
| Msa1354740 | MtrunA17_Chr1g0195541 | 99.242 | 132 | 1 | 0 | 1 | 132 | 1 | 132 | 2.52e-88 | 264 |
| Msa1354740 | MtrunA17_CPg0492431 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 8.52e-87 | 265 |
| Msa1354740 | MtrunA17_Chr3g0090851 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 8.52e-87 | 265 |
| Msa1354740 | MtrunA17_Chr4g0016091 | 99.242 | 132 | 1 | 0 | 1 | 132 | 106 | 237 | 8.52e-87 | 265 |
| Msa1354740 | MtrunA17_Chr1g0153231 | 97.297 | 74 | 2 | 0 | 58 | 131 | 1 | 74 | 7.16e-44 | 147 |
| Msa1354740 | MtrunA17_Chr0c03g0489881 | 33.028 | 218 | 135 | 4 | 129 | 346 | 2 | 208 | 4.83e-27 | 107 |
| Msa1354740 | MtrunA17_MTg0491931 | 33.028 | 218 | 135 | 4 | 129 | 346 | 2 | 208 | 4.83e-27 | 107 |
| Msa1354740 | MtrunA17_CPg0492181 | 24.865 | 370 | 251 | 10 | 6 | 366 | 147 | 498 | 5.93e-18 | 85.9 |
| Msa1354740 | MtrunA17_Chr4g0000831 | 25.210 | 238 | 160 | 7 | 6 | 239 | 32 | 255 | 1.09e-13 | 71.2 |
| Msa1354740 | MtrunA17_Chr6g0466221 | 24.324 | 370 | 233 | 11 | 6 | 366 | 147 | 478 | 4.55e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354740 | ATCG00890.1 | 93.655 | 394 | 18 | 1 | 1 | 394 | 1 | 387 | 0.0 | 666 |
| Msa1354740 | ATCG01250.1 | 93.655 | 394 | 18 | 1 | 1 | 394 | 1 | 387 | 0.0 | 666 |
| Msa1354740 | AT2G07689.1 | 35.859 | 198 | 116 | 4 | 129 | 326 | 2 | 188 | 7.76e-27 | 107 |
| Msa1354740 | ATCG01010.1 | 26.490 | 302 | 199 | 8 | 9 | 301 | 130 | 417 | 4.55e-16 | 80.5 |
Find 85 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGATATGTAATTAT+TGG | 0.189063 | tig0014543:-496101 | Msa1354740:CDS |
| CATGGTTTCTCTTGGCTATA+TGG | 0.197078 | tig0014543:-497194 | Msa1354740:CDS |
| TGGGGCAAGCTCTTCTATTC+TGG | 0.197255 | tig0014543:-497219 | Msa1354740:CDS |
| GCTATTCTTAGCATGCTATT+AGG | 0.213688 | tig0014543:-496185 | Msa1354740:CDS |
| TTTGCTTGCATTGTGTTATT+TGG | 0.223841 | tig0014543:-495996 | Msa1354740:CDS |
| TCGGAAAACTTCATTTATTC+TGG | 0.226485 | tig0014543:-495848 | Msa1354740:CDS |
| ATGGAATTGTTTGATCTTAC+AGG | 0.227109 | tig0014543:+495675 | None:intergenic |
| GCACGTGAGGAGTTATTTCT+TGG | 0.274625 | tig0014543:+495715 | None:intergenic |
| ATTAGACCGTACATCTTTCT+TGG | 0.278852 | tig0014543:+497271 | None:intergenic |
| TCCTGAGCAATTTCAATAAT+GGG | 0.279137 | tig0014543:+495594 | None:intergenic |
| ATATTCATCACTGTAGGAAT+TGG | 0.280413 | tig0014543:-497080 | Msa1354740:CDS |
| TCGTTTGATGAGAAATAAAA+AGG | 0.282633 | tig0014543:+496233 | None:intergenic |
| AGCTCTTCTATTCTGGTTCA+TGG | 0.287942 | tig0014543:-497212 | Msa1354740:CDS |
| ATCCTGAGCAATTTCAATAA+TGG | 0.298192 | tig0014543:+495593 | None:intergenic |
| CTATTCTTAGCATGCTATTA+GGG | 0.301257 | tig0014543:-496184 | Msa1354740:CDS |
| TATTCGTCCATAGGTCAAAT+TGG | 0.303171 | tig0014543:-496116 | Msa1354740:CDS |
| GCAAGCAGGCCTATATTTCT+TGG | 0.316441 | tig0014543:-495817 | Msa1354740:CDS |
| GCATACGTTTCATGCTTGTT+TGG | 0.326865 | tig0014543:+496144 | None:intergenic |
| TTCTGGTTCATGGTTTCTCT+TGG | 0.336946 | tig0014543:-497202 | Msa1354740:CDS |
| TTATGCTCCTATCTACTATC+TGG | 0.367530 | tig0014543:-497299 | Msa1354740:CDS |
| CATACGTTTCATGCTTGTTT+GGG | 0.369828 | tig0014543:+496145 | None:intergenic |
| GTAATTATTGGAATAATTGT+TGG | 0.373428 | tig0014543:-496089 | Msa1354740:CDS |
| CTATATTTCTTGGTTTCAAT+AGG | 0.375317 | tig0014543:-495807 | Msa1354740:CDS |
| ATGGGGTTCATTGATATTCC+TGG | 0.380234 | tig0014543:+495612 | None:intergenic |
| CCCTAGCCCCTTCTCATCAA+TGG | 0.393307 | tig0014543:-497046 | Msa1354740:CDS |
| GTGTTATTTGGTCTACGTAC+TGG | 0.413420 | tig0014543:-495984 | Msa1354740:CDS |
| TATTCATCACTGTAGGAATT+GGG | 0.417349 | tig0014543:-497079 | Msa1354740:CDS |
| TCTTGGCTATATGGTTCGTC+CGG | 0.418558 | tig0014543:-497185 | Msa1354740:CDS |
| TACATATCCAATTTGACCTA+TGG | 0.420081 | tig0014543:+496109 | None:intergenic |
| TTCTGGTGTGGATGGCAAGC+AGG | 0.432708 | tig0014543:-495831 | Msa1354740:CDS |
| CTATTGAAACCAAGAAATAT+AGG | 0.436794 | tig0014543:+495808 | None:intergenic |
| GCCCTATGTCTATTATCCTT+AGG | 0.440840 | tig0014543:-495897 | Msa1354740:CDS |
| GGAGGTCTTCCTCCACTAGC+AGG | 0.443104 | tig0014543:-495876 | Msa1354740:CDS |
| AGCAAAAGTTCCTAGATTCA+TGG | 0.448640 | tig0014543:+496013 | None:intergenic |
| CCCCATTATTGAAATTGCTC+AGG | 0.459148 | tig0014543:-495595 | Msa1354740:CDS |
| TTCTATATCTCCATGAATCT+AGG | 0.460861 | tig0014543:-496023 | Msa1354740:CDS |
| CTTGGCTATATGGTTCGTCC+GGG | 0.468938 | tig0014543:-497184 | Msa1354740:CDS |
| TTCATTTATTCTGGTGTGGA+TGG | 0.469314 | tig0014543:-495839 | Msa1354740:CDS |
| TACTATGAAATATTTACTCA+TGG | 0.474204 | tig0014543:-497243 | Msa1354740:CDS |
| ATAATTAAGTTATTAATGAC+TGG | 0.481516 | tig0014543:-495744 | Msa1354740:CDS |
| GGTATATCCAGATAGTAGAT+AGG | 0.488329 | tig0014543:+497292 | None:intergenic |
| ATAAGCGCAATTGAAATTCC+AGG | 0.496050 | tig0014543:+497101 | None:intergenic |
| CTCACGTGCGAAATTATAGA+AGG | 0.502645 | tig0014543:-495701 | Msa1354740:CDS |
| TGAAATATTTACTCATGGGT+GGG | 0.506663 | tig0014543:-497238 | Msa1354740:CDS |
| TCCATTGATGAGAAGGGGCT+AGG | 0.510524 | tig0014543:+497045 | None:intergenic |
| ATGCTTGCTTATTCGTCCAT+AGG | 0.517225 | tig0014543:-496125 | Msa1354740:CDS |
| TTGAAGCTCTATCTCTCCCC+CGG | 0.517737 | tig0014543:+497166 | None:intergenic |
| AAACTTCATTTATTCTGGTG+TGG | 0.518432 | tig0014543:-495843 | Msa1354740:CDS |
| TTTATTTCTCATCAAACGAA+TGG | 0.522523 | tig0014543:-496229 | Msa1354740:CDS |
| ACACAAATGTATAACTCCCC+TGG | 0.530663 | tig0014543:-497119 | Msa1354740:CDS |
| GATAACATTCGAGATTATGC+AGG | 0.531827 | tig0014543:-495957 | Msa1354740:CDS |
| ATGAAATATTTACTCATGGG+TGG | 0.533610 | tig0014543:-497239 | Msa1354740:CDS |
| GAAATATTTACTCATGGGTG+GGG | 0.537789 | tig0014543:-497237 | Msa1354740:CDS |
| TATAATCATACTCAATTCGA+TGG | 0.542526 | tig0014543:+495656 | None:intergenic |
| CAGGAGTCCATTGATGAGAA+GGG | 0.542754 | tig0014543:+497039 | None:intergenic |
| GAGCTTCAAGAAATAGTGAA+TGG | 0.546870 | tig0014543:-497152 | Msa1354740:CDS |
| ATAATTGTTGGAGACTCAAA+TGG | 0.548093 | tig0014543:-496077 | Msa1354740:CDS |
| TCAGGAGTCCATTGATGAGA+AGG | 0.551074 | tig0014543:+497038 | None:intergenic |
| AGAAAAGCAACGACTGGAGT+CGG | 0.551106 | tig0014543:+496311 | None:intergenic |
| CCATTGATGAGAAGGGGCTA+GGG | 0.552174 | tig0014543:+497046 | None:intergenic |
| TTCATATTAACCGCTACTCT+AGG | 0.552712 | tig0014543:-497386 | Msa1354740:CDS |
| TCCTAAGGATAATAGACATA+GGG | 0.556597 | tig0014543:+495896 | None:intergenic |
| CTCCTAAGGATAATAGACAT+AGG | 0.558738 | tig0014543:+495895 | None:intergenic |
| GAAAGATGTACGGTCTAATG+AGG | 0.565206 | tig0014543:-497267 | Msa1354740:CDS |
| TAAGCGCAATTGAAATTCCA+GGG | 0.565360 | tig0014543:+497102 | None:intergenic |
| CTTCTATAATTTCGCACGTG+AGG | 0.565900 | tig0014543:+495702 | None:intergenic |
| GGAGAGTCAGAGTCGAAAAG+AGG | 0.572366 | tig0014543:+496332 | None:intergenic |
| TGGCTATATGGTTCGTCCGG+GGG | 0.574450 | tig0014543:-497182 | Msa1354740:CDS |
| ATAGCATGCTAAGAATAGCT+AGG | 0.576533 | tig0014543:+496189 | None:intergenic |
| TAGTGGAGGAAGACCTCCTA+AGG | 0.577052 | tig0014543:+495881 | None:intergenic |
| ACAGAAAGAAAAGCAACGAC+TGG | 0.577795 | tig0014543:+496305 | None:intergenic |
| TTGGCTATATGGTTCGTCCG+GGG | 0.582473 | tig0014543:-497183 | Msa1354740:CDS |
| ACTATGAAATATTTACTCAT+GGG | 0.584827 | tig0014543:-497242 | Msa1354740:CDS |
| CTATGTCTATTATCCTTAGG+AGG | 0.590927 | tig0014543:-495894 | Msa1354740:CDS |
| GCGCTTATATTCATCACTGT+AGG | 0.594447 | tig0014543:-497086 | Msa1354740:CDS |
| TTGAATGAGAGAAAGAAGTG+AGG | 0.599130 | tig0014543:-496358 | Msa1354740:intron |
| CCTGAGCAATTTCAATAATG+GGG | 0.604713 | tig0014543:+495595 | None:intergenic |
| ATATTAACCGCTACTCTAGG+AGG | 0.609728 | tig0014543:-497383 | Msa1354740:CDS |
| GTGATAGCATCTACTATACC+AGG | 0.610688 | tig0014543:-495630 | Msa1354740:CDS |
| GATATACCAAGAAAGATGTA+CGG | 0.625842 | tig0014543:-497277 | Msa1354740:CDS |
| ATTGTTGGAGACTCAAATGG+TGG | 0.626325 | tig0014543:-496074 | Msa1354740:CDS |
| AGGAGTCCATTGATGAGAAG+GGG | 0.632944 | tig0014543:+497040 | None:intergenic |
| AGGAATATCGAAAATTCGAG+TGG | 0.650147 | tig0014543:+496253 | None:intergenic |
| AAACATTCCTCCTAGAGTAG+CGG | 0.663526 | tig0014543:+497376 | None:intergenic |
| AAGCGCAATTGAAATTCCAG+GGG | 0.720091 | tig0014543:+497103 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTAAAATAACAATTA+AGG | - | tig0014543:496109-496128 | Msa1354740:CDS | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | - | tig0014543:496422-496441 | Msa1354740:intron | 15.0% |
| !! | ATAATTAAGTTATTAATGAC+TGG | - | tig0014543:497247-497266 | Msa1354740:CDS | 15.0% |
| !!! | ACTTGTTAAAATAACAATTA+AGG | - | tig0014543:496109-496128 | Msa1354740:CDS | 15.0% |
| !! | TCATAAAGATTGATAAAAAT+AGG | - | tig0014543:496422-496441 | Msa1354740:intron | 15.0% |
| !! | ATAATTAAGTTATTAATGAC+TGG | - | tig0014543:497247-497266 | Msa1354740:CDS | 15.0% |
| !! | TACTATGAAATATTTACTCA+TGG | - | tig0014543:495748-495767 | Msa1354740:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | - | tig0014543:495749-495768 | Msa1354740:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | - | tig0014543:496178-496197 | Msa1354740:CDS | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | + | tig0014543:496499-496518 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | - | tig0014543:496499-496518 | Msa1354740:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | - | tig0014543:496890-496909 | Msa1354740:intron | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | - | tig0014543:496902-496921 | Msa1354740:intron | 20.0% |
| !! | TACTATGAAATATTTACTCA+TGG | - | tig0014543:495748-495767 | Msa1354740:CDS | 20.0% |
| !! | ACTATGAAATATTTACTCAT+GGG | - | tig0014543:495749-495768 | Msa1354740:CDS | 20.0% |
| !!! | ATTTTCCAAGTTTGTTATTA+CGG | - | tig0014543:496178-496197 | Msa1354740:CDS | 20.0% |
| !!! | TTCGATTTTTACTTTTCAAA+AGG | + | tig0014543:496499-496518 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTAAAAATCGAA+TGG | - | tig0014543:496499-496518 | Msa1354740:intron | 20.0% |
| !! | CAAATTGGATATGTAATTAT+TGG | - | tig0014543:496890-496909 | Msa1354740:intron | 20.0% |
| !! | GTAATTATTGGAATAATTGT+TGG | - | tig0014543:496902-496921 | Msa1354740:intron | 20.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | - | tig0014543:496038-496057 | Msa1354740:CDS | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | + | tig0014543:496097-496116 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | - | tig0014543:496179-496198 | Msa1354740:CDS | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | + | tig0014543:496210-496229 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | + | tig0014543:496238-496257 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | - | tig0014543:496505-496524 | Msa1354740:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | + | tig0014543:496574-496593 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | - | tig0014543:496578-496597 | Msa1354740:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | + | tig0014543:496761-496780 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | - | tig0014543:496762-496781 | Msa1354740:intron | 25.0% |
| !!! | ATACACAAAAGATCCTTTTT+TGG | - | tig0014543:497060-497079 | Msa1354740:CDS | 25.0% |
| ! | CTATTGAAACCAAGAAATAT+AGG | + | tig0014543:497186-497205 | None:intergenic | 25.0% |
| ! | CTATATTTCTTGGTTTCAAT+AGG | - | tig0014543:497184-497203 | Msa1354740:CDS | 25.0% |
| ! | TATAATCATACTCAATTCGA+TGG | + | tig0014543:497338-497357 | None:intergenic | 25.0% |
| !!! | TTGGATTTTTCAAAACTCTA+TGG | - | tig0014543:496038-496057 | Msa1354740:CDS | 25.0% |
| ! | TAACAAGTAAAGTTATGTCT+TGG | + | tig0014543:496097-496116 | None:intergenic | 25.0% |
| !!! | TTTTCCAAGTTTGTTATTAC+GGG | - | tig0014543:496179-496198 | Msa1354740:CDS | 25.0% |
| ! | TCATTAGTATGATACTTTGT+AGG | + | tig0014543:496210-496229 | None:intergenic | 25.0% |
| ! | TACATTGAGAATTCAAGTAT+TGG | + | tig0014543:496238-496257 | None:intergenic | 25.0% |
| !! | AAGTAAAAATCGAATGGATT+CGG | - | tig0014543:496505-496524 | Msa1354740:intron | 25.0% |
| ! | GATAAAAGAAAGAAGAAGAT+TGG | + | tig0014543:496574-496593 | None:intergenic | 25.0% |
| !! | TCTTCTTTCTTTTATCACTT+AGG | - | tig0014543:496578-496597 | Msa1354740:intron | 25.0% |
| ! | TCGTTTGATGAGAAATAAAA+AGG | + | tig0014543:496761-496780 | None:intergenic | 25.0% |
| !! | TTTATTTCTCATCAAACGAA+TGG | - | tig0014543:496762-496781 | Msa1354740:intron | 25.0% |
| !!! | ATACACAAAAGATCCTTTTT+TGG | - | tig0014543:497060-497079 | Msa1354740:CDS | 25.0% |
| ! | CTATTGAAACCAAGAAATAT+AGG | + | tig0014543:497186-497205 | None:intergenic | 25.0% |
| ! | CTATATTTCTTGGTTTCAAT+AGG | - | tig0014543:497184-497203 | Msa1354740:CDS | 25.0% |
| ! | TATAATCATACTCAATTCGA+TGG | + | tig0014543:497338-497357 | None:intergenic | 25.0% |
| GATATACCAAGAAAGATGTA+CGG | - | tig0014543:495714-495733 | Msa1354740:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | - | tig0014543:495752-495771 | Msa1354740:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | - | tig0014543:495753-495772 | Msa1354740:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | - | tig0014543:495911-495930 | Msa1354740:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | - | tig0014543:495912-495931 | Msa1354740:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | - | tig0014543:496019-496038 | Msa1354740:CDS | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | + | tig0014543:496284-496303 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | - | tig0014543:496284-496303 | Msa1354740:CDS | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | - | tig0014543:496384-496403 | Msa1354740:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | - | tig0014543:496807-496826 | Msa1354740:intron | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | + | tig0014543:496885-496904 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | - | tig0014543:496914-496933 | Msa1354740:intron | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | - | tig0014543:496968-496987 | Msa1354740:intron | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | - | tig0014543:496995-497014 | Msa1354740:intron | 30.0% |
| TCCTAAGGATAATAGACATA+GGG | + | tig0014543:497098-497117 | None:intergenic | 30.0% | |
| TCGGAAAACTTCATTTATTC+TGG | - | tig0014543:497143-497162 | Msa1354740:CDS | 30.0% | |
| AAACTTCATTTATTCTGGTG+TGG | - | tig0014543:497148-497167 | Msa1354740:CDS | 30.0% | |
| ATGGAATTGTTTGATCTTAC+AGG | + | tig0014543:497319-497338 | None:intergenic | 30.0% | |
| TCCTGAGCAATTTCAATAAT+GGG | + | tig0014543:497400-497419 | None:intergenic | 30.0% | |
| ATCCTGAGCAATTTCAATAA+TGG | + | tig0014543:497401-497420 | None:intergenic | 30.0% | |
| GATATACCAAGAAAGATGTA+CGG | - | tig0014543:495714-495733 | Msa1354740:CDS | 30.0% | |
| ATGAAATATTTACTCATGGG+TGG | - | tig0014543:495752-495771 | Msa1354740:CDS | 30.0% | |
| TGAAATATTTACTCATGGGT+GGG | - | tig0014543:495753-495772 | Msa1354740:CDS | 30.0% | |
| ATATTCATCACTGTAGGAAT+TGG | - | tig0014543:495911-495930 | Msa1354740:CDS | 30.0% | |
| TATTCATCACTGTAGGAATT+GGG | - | tig0014543:495912-495931 | Msa1354740:CDS | 30.0% | |
| !! | CTATCTATTTCTGAGATGTT+TGG | - | tig0014543:496019-496038 | Msa1354740:CDS | 30.0% |
| ATTATATTCGTAGTCTCTGA+AGG | + | tig0014543:496284-496303 | None:intergenic | 30.0% | |
| TCAGAGACTACGAATATAAT+AGG | - | tig0014543:496284-496303 | Msa1354740:CDS | 30.0% | |
| !!! | TTTCTCCATTTTTTAGACCT+AGG | - | tig0014543:496384-496403 | Msa1354740:intron | 30.0% |
| CTATTCTTAGCATGCTATTA+GGG | - | tig0014543:496807-496826 | Msa1354740:intron | 30.0% | |
| TACATATCCAATTTGACCTA+TGG | + | tig0014543:496885-496904 | None:intergenic | 30.0% | |
| ATAATTGTTGGAGACTCAAA+TGG | - | tig0014543:496914-496933 | Msa1354740:intron | 30.0% | |
| TTCTATATCTCCATGAATCT+AGG | - | tig0014543:496968-496987 | Msa1354740:intron | 30.0% | |
| ! | TTTGCTTGCATTGTGTTATT+TGG | - | tig0014543:496995-497014 | Msa1354740:intron | 30.0% |
| TCCTAAGGATAATAGACATA+GGG | + | tig0014543:497098-497117 | None:intergenic | 30.0% | |
| TCGGAAAACTTCATTTATTC+TGG | - | tig0014543:497143-497162 | Msa1354740:CDS | 30.0% | |
| AAACTTCATTTATTCTGGTG+TGG | - | tig0014543:497148-497167 | Msa1354740:CDS | 30.0% | |
| ATGGAATTGTTTGATCTTAC+AGG | + | tig0014543:497319-497338 | None:intergenic | 30.0% | |
| TCCTGAGCAATTTCAATAAT+GGG | + | tig0014543:497400-497419 | None:intergenic | 30.0% | |
| ATCCTGAGCAATTTCAATAA+TGG | + | tig0014543:497401-497420 | None:intergenic | 30.0% | |
| TTCATATTAACCGCTACTCT+AGG | - | tig0014543:495605-495624 | Msa1354740:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | - | tig0014543:495692-495711 | Msa1354740:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | + | tig0014543:495702-495721 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | + | tig0014543:495723-495742 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | - | tig0014543:495754-495773 | Msa1354740:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | - | tig0014543:495839-495858 | Msa1354740:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | + | tig0014543:495892-495911 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | + | tig0014543:495893-495912 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | + | tig0014543:496013-496032 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | + | tig0014543:496017-496036 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | - | tig0014543:496151-496170 | Msa1354740:CDS | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | + | tig0014543:496161-496180 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | + | tig0014543:496186-496205 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | - | tig0014543:496251-496270 | Msa1354740:CDS | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | - | tig0014543:496356-496375 | Msa1354740:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | + | tig0014543:496392-496411 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | - | tig0014543:496393-496412 | Msa1354740:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | + | tig0014543:496412-496431 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | - | tig0014543:496633-496652 | Msa1354740:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | + | tig0014543:496741-496760 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | + | tig0014543:496805-496824 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | - | tig0014543:496806-496825 | Msa1354740:intron | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | + | tig0014543:496849-496868 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | - | tig0014543:496875-496894 | Msa1354740:intron | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | + | tig0014543:496981-497000 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | - | tig0014543:497034-497053 | Msa1354740:intron | 35.0% | |
| CTCCTAAGGATAATAGACAT+AGG | + | tig0014543:497099-497118 | None:intergenic | 35.0% | |
| CTATGTCTATTATCCTTAGG+AGG | - | tig0014543:497097-497116 | Msa1354740:CDS | 35.0% | |
| TTCATTTATTCTGGTGTGGA+TGG | - | tig0014543:497152-497171 | Msa1354740:CDS | 35.0% | |
| CCTGAGCAATTTCAATAATG+GGG | + | tig0014543:497399-497418 | None:intergenic | 35.0% | |
| TTCATATTAACCGCTACTCT+AGG | - | tig0014543:495605-495624 | Msa1354740:CDS | 35.0% | |
| TTATGCTCCTATCTACTATC+TGG | - | tig0014543:495692-495711 | Msa1354740:CDS | 35.0% | |
| GGTATATCCAGATAGTAGAT+AGG | + | tig0014543:495702-495721 | None:intergenic | 35.0% | |
| ATTAGACCGTACATCTTTCT+TGG | + | tig0014543:495723-495742 | None:intergenic | 35.0% | |
| GAAATATTTACTCATGGGTG+GGG | - | tig0014543:495754-495773 | Msa1354740:CDS | 35.0% | |
| GAGCTTCAAGAAATAGTGAA+TGG | - | tig0014543:495839-495858 | Msa1354740:CDS | 35.0% | |
| TAAGCGCAATTGAAATTCCA+GGG | + | tig0014543:495892-495911 | None:intergenic | 35.0% | |
| ATAAGCGCAATTGAAATTCC+AGG | + | tig0014543:495893-495912 | None:intergenic | 35.0% | |
| TCAGAAATAGATAGAGAGGT+CGG | + | tig0014543:496013-496032 | None:intergenic | 35.0% | |
| CATCTCAGAAATAGATAGAG+AGG | + | tig0014543:496017-496036 | None:intergenic | 35.0% | |
| ATGAATCCCGGTATGATAAA+CGG | - | tig0014543:496151-496170 | Msa1354740:CDS | 35.0% | |
| AATGAACCCGTTTATCATAC+CGG | + | tig0014543:496161-496180 | None:intergenic | 35.0% | |
| ACTACCCGTAATAACAAACT+TGG | + | tig0014543:496186-496205 | None:intergenic | 35.0% | |
| CAATGTAGATGCTACATAGT+TGG | - | tig0014543:496251-496270 | Msa1354740:CDS | 35.0% | |
| TGAGAACGAATCAAATCAGA+TGG | - | tig0014543:496356-496375 | Msa1354740:intron | 35.0% | |
| TGGAACCTAGGTCTAAAAAA+TGG | + | tig0014543:496392-496411 | None:intergenic | 35.0% | |
| ! | TTTTTAGACCTAGGTTCCAT+AGG | - | tig0014543:496393-496412 | Msa1354740:intron | 35.0% |
| !! | ATCTTTATGACTTGCTCCTA+TGG | + | tig0014543:496412-496431 | None:intergenic | 35.0% |
| TTGAATGAGAGAAAGAAGTG+AGG | - | tig0014543:496633-496652 | Msa1354740:intron | 35.0% | |
| AGGAATATCGAAAATTCGAG+TGG | + | tig0014543:496741-496760 | None:intergenic | 35.0% | |
| ATAGCATGCTAAGAATAGCT+AGG | + | tig0014543:496805-496824 | None:intergenic | 35.0% | |
| GCTATTCTTAGCATGCTATT+AGG | - | tig0014543:496806-496825 | Msa1354740:intron | 35.0% | |
| CATACGTTTCATGCTTGTTT+GGG | + | tig0014543:496849-496868 | None:intergenic | 35.0% | |
| TATTCGTCCATAGGTCAAAT+TGG | - | tig0014543:496875-496894 | Msa1354740:intron | 35.0% | |
| AGCAAAAGTTCCTAGATTCA+TGG | + | tig0014543:496981-497000 | None:intergenic | 35.0% | |
| GATAACATTCGAGATTATGC+AGG | - | tig0014543:497034-497053 | Msa1354740:intron | 35.0% | |
| CTCCTAAGGATAATAGACAT+AGG | + | tig0014543:497099-497118 | None:intergenic | 35.0% | |
| CTATGTCTATTATCCTTAGG+AGG | - | tig0014543:497097-497116 | Msa1354740:CDS | 35.0% | |
| TTCATTTATTCTGGTGTGGA+TGG | - | tig0014543:497152-497171 | Msa1354740:CDS | 35.0% | |
| CCTGAGCAATTTCAATAATG+GGG | + | tig0014543:497399-497418 | None:intergenic | 35.0% | |
| ATATTAACCGCTACTCTAGG+AGG | - | tig0014543:495608-495627 | Msa1354740:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | + | tig0014543:495618-495637 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | - | tig0014543:495724-495743 | Msa1354740:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | - | tig0014543:495779-495798 | Msa1354740:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | - | tig0014543:495789-495808 | Msa1354740:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | - | tig0014543:495797-495816 | Msa1354740:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | - | tig0014543:495872-495891 | Msa1354740:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | + | tig0014543:495891-495910 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | - | tig0014543:495905-495924 | Msa1354740:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | - | tig0014543:496124-496143 | Msa1354740:CDS | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | - | tig0014543:496152-496171 | Msa1354740:CDS | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | + | tig0014543:496160-496179 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | + | tig0014543:496315-496334 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | + | tig0014543:496333-496352 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | + | tig0014543:496334-496353 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | - | tig0014543:496445-496464 | Msa1354740:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | - | tig0014543:496464-496483 | Msa1354740:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | - | tig0014543:496470-496489 | Msa1354740:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | + | tig0014543:496474-496493 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | + | tig0014543:496689-496708 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | + | tig0014543:496850-496869 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | - | tig0014543:496866-496885 | Msa1354740:intron | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | - | tig0014543:496917-496936 | Msa1354740:intron | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | - | tig0014543:497007-497026 | Msa1354740:intron | 40.0% |
| GCTAAAGAGAGAGCCAAAAA+AGG | + | tig0014543:497076-497095 | None:intergenic | 40.0% | |
| GCCCTATGTCTATTATCCTT+AGG | - | tig0014543:497094-497113 | Msa1354740:CDS | 40.0% | |
| TTTCCGAAAAAACCTGCTAG+TGG | + | tig0014543:497130-497149 | None:intergenic | 40.0% | |
| CTTCTATAATTTCGCACGTG+AGG | + | tig0014543:497292-497311 | None:intergenic | 40.0% | |
| CTCACGTGCGAAATTATAGA+AGG | - | tig0014543:497290-497309 | Msa1354740:CDS | 40.0% | |
| GTGATAGCATCTACTATACC+AGG | - | tig0014543:497361-497380 | Msa1354740:CDS | 40.0% | |
| ATGGGGTTCATTGATATTCC+TGG | + | tig0014543:497382-497401 | None:intergenic | 40.0% | |
| CCCCATTATTGAAATTGCTC+AGG | - | tig0014543:497396-497415 | Msa1354740:CDS | 40.0% | |
| ATATTAACCGCTACTCTAGG+AGG | - | tig0014543:495608-495627 | Msa1354740:CDS | 40.0% | |
| AAACATTCCTCCTAGAGTAG+CGG | + | tig0014543:495618-495637 | None:intergenic | 40.0% | |
| GAAAGATGTACGGTCTAATG+AGG | - | tig0014543:495724-495743 | Msa1354740:CDS | 40.0% | |
| !! | AGCTCTTCTATTCTGGTTCA+TGG | - | tig0014543:495779-495798 | Msa1354740:CDS | 40.0% |
| !! | TTCTGGTTCATGGTTTCTCT+TGG | - | tig0014543:495789-495808 | Msa1354740:CDS | 40.0% |
| CATGGTTTCTCTTGGCTATA+TGG | - | tig0014543:495797-495816 | Msa1354740:CDS | 40.0% | |
| ACACAAATGTATAACTCCCC+TGG | - | tig0014543:495872-495891 | Msa1354740:CDS | 40.0% | |
| AAGCGCAATTGAAATTCCAG+GGG | + | tig0014543:495891-495910 | None:intergenic | 40.0% | |
| GCGCTTATATTCATCACTGT+AGG | - | tig0014543:495905-495924 | Msa1354740:CDS | 40.0% | |
| AATTAAGGTGAAGCAGAGTC+AGG | - | tig0014543:496124-496143 | Msa1354740:CDS | 40.0% | |
| TGAATCCCGGTATGATAAAC+GGG | - | tig0014543:496152-496171 | Msa1354740:CDS | 40.0% | |
| ATGAACCCGTTTATCATACC+GGG | + | tig0014543:496160-496179 | None:intergenic | 40.0% | |
| ! | TAGGGTGATCCTTTTGTTGA+CGG | + | tig0014543:496315-496334 | None:intergenic | 40.0% |
| GTCACGAGATGATCATCTTA+GGG | + | tig0014543:496333-496352 | None:intergenic | 40.0% | |
| AGTCACGAGATGATCATCTT+AGG | + | tig0014543:496334-496353 | None:intergenic | 40.0% | |
| TCATTCACAACCACTGATGA+AGG | - | tig0014543:496445-496464 | Msa1354740:intron | 40.0% | |
| AAGGATTCCTCGAAAAGTTC+AGG | - | tig0014543:496464-496483 | Msa1354740:intron | 40.0% | |
| TCCTCGAAAAGTTCAGGATT+AGG | - | tig0014543:496470-496489 | Msa1354740:intron | 40.0% | |
| ! | TCCTAATCCTGAACTTTTCG+AGG | + | tig0014543:496474-496493 | None:intergenic | 40.0% |
| ACAGAAAGAAAAGCAACGAC+TGG | + | tig0014543:496689-496708 | None:intergenic | 40.0% | |
| GCATACGTTTCATGCTTGTT+TGG | + | tig0014543:496850-496869 | None:intergenic | 40.0% | |
| ATGCTTGCTTATTCGTCCAT+AGG | - | tig0014543:496866-496885 | Msa1354740:intron | 40.0% | |
| ATTGTTGGAGACTCAAATGG+TGG | - | tig0014543:496917-496936 | Msa1354740:intron | 40.0% | |
| !! | GTGTTATTTGGTCTACGTAC+TGG | - | tig0014543:497007-497026 | Msa1354740:intron | 40.0% |
| GCTAAAGAGAGAGCCAAAAA+AGG | + | tig0014543:497076-497095 | None:intergenic | 40.0% | |
| GCCCTATGTCTATTATCCTT+AGG | - | tig0014543:497094-497113 | Msa1354740:CDS | 40.0% | |
| TTTCCGAAAAAACCTGCTAG+TGG | + | tig0014543:497130-497149 | None:intergenic | 40.0% | |
| CTTCTATAATTTCGCACGTG+AGG | + | tig0014543:497292-497311 | None:intergenic | 40.0% | |
| CTCACGTGCGAAATTATAGA+AGG | - | tig0014543:497290-497309 | Msa1354740:CDS | 40.0% | |
| GTGATAGCATCTACTATACC+AGG | - | tig0014543:497361-497380 | Msa1354740:CDS | 40.0% | |
| ATGGGGTTCATTGATATTCC+TGG | + | tig0014543:497382-497401 | None:intergenic | 40.0% | |
| CCCCATTATTGAAATTGCTC+AGG | - | tig0014543:497396-497415 | Msa1354740:CDS | 40.0% | |
| TCTTGGCTATATGGTTCGTC+CGG | - | tig0014543:495806-495825 | Msa1354740:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | + | tig0014543:495954-495973 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | + | tig0014543:495955-495974 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | + | tig0014543:495956-495975 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | - | tig0014543:495965-495984 | Msa1354740:CDS | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | - | tig0014543:495972-495991 | Msa1354740:CDS | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | - | tig0014543:496070-496089 | Msa1354740:CDS | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | + | tig0014543:496087-496106 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | + | tig0014543:496088-496107 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | - | tig0014543:496139-496158 | Msa1354740:CDS | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | - | tig0014543:496303-496322 | Msa1354740:CDS | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | + | tig0014543:496458-496477 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | - | tig0014543:496523-496542 | Msa1354740:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | - | tig0014543:496527-496546 | Msa1354740:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | + | tig0014543:496606-496625 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | - | tig0014543:496608-496627 | Msa1354740:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | + | tig0014543:496683-496702 | None:intergenic | 45.0% | |
| !!! | CCTCCACTAGCAGGTTTTTT+CGG | - | tig0014543:497124-497143 | Msa1354740:CDS | 45.0% |
| GCAAGCAGGCCTATATTTCT+TGG | - | tig0014543:497174-497193 | Msa1354740:CDS | 45.0% | |
| !! | GCACGTGAGGAGTTATTTCT+TGG | + | tig0014543:497279-497298 | None:intergenic | 45.0% |
| TCTTGGCTATATGGTTCGTC+CGG | - | tig0014543:495806-495825 | Msa1354740:CDS | 45.0% | |
| AGGAGTCCATTGATGAGAAG+GGG | + | tig0014543:495954-495973 | None:intergenic | 45.0% | |
| CAGGAGTCCATTGATGAGAA+GGG | + | tig0014543:495955-495974 | None:intergenic | 45.0% | |
| TCAGGAGTCCATTGATGAGA+AGG | + | tig0014543:495956-495975 | None:intergenic | 45.0% | |
| TGGACTCCTGACGTATATGA+AGG | - | tig0014543:495965-495984 | Msa1354740:CDS | 45.0% | |
| CTGACGTATATGAAGGAGTG+CGG | - | tig0014543:495972-495991 | Msa1354740:CDS | 45.0% | |
| AGAGACATGCTATTCCCACT+CGG | - | tig0014543:496070-496089 | Msa1354740:CDS | 45.0% | |
| AGTTATGTCTTGGTCCGAGT+GGG | + | tig0014543:496087-496106 | None:intergenic | 45.0% | |
| AAGTTATGTCTTGGTCCGAG+TGG | + | tig0014543:496088-496107 | None:intergenic | 45.0% | |
| GAGTCAGGAACAATGAATCC+CGG | - | tig0014543:496139-496158 | Msa1354740:CDS | 45.0% | |
| !! | TAGGAGCATCCGTCAACAAA+AGG | - | tig0014543:496303-496322 | Msa1354740:CDS | 45.0% |
| TTCGAGGAATCCTTCATCAG+TGG | + | tig0014543:496458-496477 | None:intergenic | 45.0% | |
| ! | TTCGGTCTTATACATACGCG+AGG | - | tig0014543:496523-496542 | Msa1354740:intron | 45.0% |
| GTCTTATACATACGCGAGGA+AGG | - | tig0014543:496527-496546 | Msa1354740:intron | 45.0% | |
| CATGAGACTTTCATCTCGCA+CGG | + | tig0014543:496606-496625 | None:intergenic | 45.0% | |
| CGAGATGAAAGTCTCATGCA+CGG | - | tig0014543:496608-496627 | Msa1354740:intron | 45.0% | |
| AGAAAAGCAACGACTGGAGT+CGG | + | tig0014543:496683-496702 | None:intergenic | 45.0% | |
| !!! | CCTCCACTAGCAGGTTTTTT+CGG | - | tig0014543:497124-497143 | Msa1354740:CDS | 45.0% |
| GCAAGCAGGCCTATATTTCT+TGG | - | tig0014543:497174-497193 | Msa1354740:CDS | 45.0% | |
| !! | GCACGTGAGGAGTTATTTCT+TGG | + | tig0014543:497279-497298 | None:intergenic | 45.0% |
| TGGGGCAAGCTCTTCTATTC+TGG | - | tig0014543:495772-495791 | Msa1354740:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | - | tig0014543:495807-495826 | Msa1354740:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | - | tig0014543:495808-495827 | Msa1354740:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | + | tig0014543:495828-495847 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | + | tig0014543:495948-495967 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | + | tig0014543:495949-495968 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | + | tig0014543:495974-495993 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | + | tig0014543:496404-496423 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | + | tig0014543:496662-496681 | None:intergenic | 50.0% | |
| TAGTGGAGGAAGACCTCCTA+AGG | + | tig0014543:497113-497132 | None:intergenic | 50.0% | |
| CCGAAAAAACCTGCTAGTGG+AGG | + | tig0014543:497127-497146 | None:intergenic | 50.0% | |
| TGGGGCAAGCTCTTCTATTC+TGG | - | tig0014543:495772-495791 | Msa1354740:CDS | 50.0% | |
| CTTGGCTATATGGTTCGTCC+GGG | - | tig0014543:495807-495826 | Msa1354740:CDS | 50.0% | |
| TTGGCTATATGGTTCGTCCG+GGG | - | tig0014543:495808-495827 | Msa1354740:CDS | 50.0% | |
| TTGAAGCTCTATCTCTCCCC+CGG | + | tig0014543:495828-495847 | None:intergenic | 50.0% | |
| CCATTGATGAGAAGGGGCTA+GGG | + | tig0014543:495948-495967 | None:intergenic | 50.0% | |
| TCCATTGATGAGAAGGGGCT+AGG | + | tig0014543:495949-495968 | None:intergenic | 50.0% | |
| CGCACTCCTTCATATACGTC+AGG | + | tig0014543:495974-495993 | None:intergenic | 50.0% | |
| ! | GACTTGCTCCTATGGAACCT+AGG | + | tig0014543:496404-496423 | None:intergenic | 50.0% |
| GGAGAGTCAGAGTCGAAAAG+AGG | + | tig0014543:496662-496681 | None:intergenic | 50.0% | |
| TAGTGGAGGAAGACCTCCTA+AGG | + | tig0014543:497113-497132 | None:intergenic | 50.0% | |
| CCGAAAAAACCTGCTAGTGG+AGG | + | tig0014543:497127-497146 | None:intergenic | 50.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | - | tig0014543:495809-495828 | Msa1354740:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | - | tig0014543:495945-495964 | Msa1354740:CDS | 55.0% | |
| TTCTGGTGTGGATGGCAAGC+AGG | - | tig0014543:497160-497179 | Msa1354740:CDS | 55.0% | |
| TGGCTATATGGTTCGTCCGG+GGG | - | tig0014543:495809-495828 | Msa1354740:CDS | 55.0% | |
| CCCTAGCCCCTTCTCATCAA+TGG | - | tig0014543:495945-495964 | Msa1354740:CDS | 55.0% | |
| TTCTGGTGTGGATGGCAAGC+AGG | - | tig0014543:497160-497179 | Msa1354740:CDS | 55.0% | |
| GGAGGTCTTCCTCCACTAGC+AGG | - | tig0014543:497115-497134 | Msa1354740:CDS | 60.0% | |
| GGAGGTCTTCCTCCACTAGC+AGG | - | tig0014543:497115-497134 | Msa1354740:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0014543 | gene | 495581 | 497432 | 495581 | ID=Msa1354740;Name=Msa1354740 |
| tig0014543 | mRNA | 495581 | 497432 | 495581 | ID=Msa1354740-mRNA-1;Parent=Msa1354740;Name=Msa1354740-mRNA-1;_AED=0.80;_eAED=0.80;_QI=0|0|0|0.5|1|1|2|0|394 |
| tig0014543 | exon | 497037 | 497432 | 497037 | ID=Msa1354740-mRNA-1:exon:9230;Parent=Msa1354740-mRNA-1 |
| tig0014543 | exon | 495581 | 496369 | 495581 | ID=Msa1354740-mRNA-1:exon:9229;Parent=Msa1354740-mRNA-1 |
| tig0014543 | CDS | 497037 | 497432 | 497037 | ID=Msa1354740-mRNA-1:cds;Parent=Msa1354740-mRNA-1 |
| tig0014543 | CDS | 495581 | 496369 | 495581 | ID=Msa1354740-mRNA-1:cds;Parent=Msa1354740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
