Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365970 | AES69829.1 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 2.67e-75 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365970 | sp|A4GYN8|RR12B_POPTR | 95.876 | 97 | 4 | 0 | 61 | 157 | 39 | 135 | 3.89e-61 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365970 | G7J101 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 1.28e-75 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074140 | Msa1365970 | 0.804804 | 1.812120e-49 | -8.615850e-47 |
| Msa0074180 | Msa1365970 | 0.801516 | 8.678401e-49 | -8.615850e-47 |
| Msa0095150 | Msa1365970 | 0.818491 | 1.907146e-52 | -8.615850e-47 |
| Msa0095210 | Msa1365970 | 0.811867 | 5.647431e-51 | -8.615850e-47 |
| Msa0095230 | Msa1365970 | 0.800780 | 1.227529e-48 | -8.615850e-47 |
| Msa1354420 | Msa1365970 | 0.910421 | 1.909532e-82 | -8.615850e-47 |
| Msa1354430 | Msa1365970 | 0.845261 | 4.534474e-59 | -8.615850e-47 |
| Msa1354480 | Msa1365970 | 0.846665 | 1.882778e-59 | -8.615850e-47 |
| Msa1354490 | Msa1365970 | 0.856249 | 3.655223e-62 | -8.615850e-47 |
| Msa1354500 | Msa1365970 | 0.941199 | 6.301955e-101 | -8.615850e-47 |
| Msa1354550 | Msa1365970 | 0.902775 | 6.862974e-79 | -8.615850e-47 |
| Msa1354560 | Msa1365970 | 0.840681 | 7.509005e-58 | -8.615850e-47 |
| Msa1354610 | Msa1365970 | 0.862728 | 4.125595e-64 | -8.615850e-47 |
| Msa1354620 | Msa1365970 | 0.862437 | 5.071724e-64 | -8.615850e-47 |
| Msa1354630 | Msa1365970 | 0.934504 | 3.645596e-96 | -8.615850e-47 |
| Msa1354680 | Msa1365970 | 0.932068 | 1.481464e-94 | -8.615850e-47 |
| Msa1354690 | Msa1365970 | 0.876167 | 1.730872e-68 | -8.615850e-47 |
| Msa1354700 | Msa1365970 | 0.835811 | 1.350385e-56 | -8.615850e-47 |
| Msa1354740 | Msa1365970 | 0.857816 | 1.261352e-62 | -8.615850e-47 |
| Msa1354750 | Msa1365970 | 0.859548 | 3.832448e-63 | -8.615850e-47 |
| Msa1354760 | Msa1365970 | 0.935137 | 1.360651e-96 | -8.615850e-47 |
| Msa1354810 | Msa1365970 | 0.904050 | 1.839268e-79 | -8.615850e-47 |
| Msa1354820 | Msa1365970 | 0.842578 | 2.373342e-58 | -8.615850e-47 |
| Msa1354910 | Msa1365970 | 0.811194 | 7.910046e-51 | -8.615850e-47 |
| Msa1354920 | Msa1365970 | 0.847926 | 8.487858e-60 | -8.615850e-47 |
| Msa1354930 | Msa1365970 | 0.808750 | 2.656131e-50 | -8.615850e-47 |
| Msa1354980 | Msa1365970 | 0.912823 | 1.251744e-83 | -8.615850e-47 |
| Msa1354990 | Msa1365970 | 0.865699 | 4.885723e-65 | -8.615850e-47 |
| Msa1355070 | Msa1365970 | 0.810927 | 9.035864e-51 | -8.615850e-47 |
| Msa1355080 | Msa1365970 | 0.839579 | 1.456729e-57 | -8.615850e-47 |
| Msa1355090 | Msa1365970 | 0.841343 | 5.034019e-58 | -8.615850e-47 |
| Msa1355100 | Msa1365970 | 0.809540 | 1.799123e-50 | -8.615850e-47 |
| Msa1365890 | Msa1365970 | 0.889708 | 1.902321e-73 | -8.615850e-47 |
| Msa1365900 | Msa1365970 | 0.841212 | 5.447743e-58 | -8.615850e-47 |
| Msa1365950 | Msa1365970 | 0.848313 | 6.635618e-60 | -8.615850e-47 |
| Msa1365960 | Msa1365970 | 0.844714 | 6.373027e-59 | -8.615850e-47 |
| Msa1365970 | Msa1366080 | 0.888304 | 6.645864e-73 | -8.615850e-47 |
| Msa1365970 | Msa1366090 | 0.834774 | 2.466966e-56 | -8.615850e-47 |
| Msa1365970 | Msa1368230 | 0.861441 | 1.023786e-63 | -8.615850e-47 |
| Msa1365970 | Msa1368240 | 0.933059 | 3.335767e-95 | -8.615850e-47 |
| Msa1365970 | Msa1380600 | 0.809699 | 1.662835e-50 | -8.615850e-47 |
| Msa1365970 | Msa1380610 | 0.809128 | 2.205481e-50 | -8.615850e-47 |
| Msa1365970 | Msa1380620 | 0.822116 | 2.813771e-53 | -8.615850e-47 |
| Msa1365970 | Msa1385410 | 0.867936 | 9.470997e-66 | -8.615850e-47 |
| Msa1365970 | Msa1385420 | 0.826656 | 2.407304e-54 | -8.615850e-47 |
| Msa1365970 | Msa1391090 | 0.824368 | 8.383906e-54 | -8.615850e-47 |
| Msa1365970 | Msa1391100 | 0.847091 | 1.439702e-59 | -8.615850e-47 |
| Msa1365970 | Msa1391110 | 0.931215 | 5.244604e-94 | -8.615850e-47 |
| Msa1365970 | Msa1391160 | 0.865753 | 4.698241e-65 | -8.615850e-47 |
| Msa1365970 | Msa1391170 | 0.860788 | 1.617969e-63 | -8.615850e-47 |
| Msa1365970 | Msa1391220 | 0.843995 | 9.943022e-59 | -8.615850e-47 |
| Msa1365970 | Msa1391230 | 0.858003 | 1.109873e-62 | -8.615850e-47 |
| Msa1365970 | Msa1391240 | 0.932877 | 4.399318e-95 | -8.615850e-47 |
| Msa1365970 | Msa1394030 | 0.854634 | 1.080135e-61 | -8.615850e-47 |
| Msa1365970 | Msa1394040 | 0.839165 | 1.865086e-57 | -8.615850e-47 |
| Msa1365970 | Msa1394060 | 0.832403 | 9.645203e-56 | -8.615850e-47 |
| Msa1365970 | Msa1394080 | 0.813615 | 2.339663e-51 | -8.615850e-47 |
| Msa1365970 | Msa1394150 | 0.828618 | 8.134759e-55 | -8.615850e-47 |
| Msa1365970 | Msa1394160 | 0.836560 | 8.712314e-57 | -8.615850e-47 |
| Msa1365970 | Msa1394210 | 0.838761 | 2.373126e-57 | -8.615850e-47 |
| Msa1365970 | Msa1394230 | 0.810216 | 1.287081e-50 | -8.615850e-47 |
| Msa1365970 | Msa1394250 | 0.820011 | 8.590668e-53 | -8.615850e-47 |
| Msa1365970 | Msa1460120 | 0.850894 | 1.263858e-60 | -8.615850e-47 |
| Msa1365970 | Msa1460130 | 0.846009 | 2.842479e-59 | -8.615850e-47 |
| Msa0202640 | Msa1365970 | 0.863692 | 2.076944e-64 | -8.615850e-47 |
| Msa1305090 | Msa1365970 | 0.843985 | 1.000284e-58 | -8.615850e-47 |
| Msa0370210 | Msa1365970 | 0.807178 | 5.739793e-50 | -8.615850e-47 |
| Msa0405420 | Msa1365970 | 0.858653 | 7.105678e-63 | -8.615850e-47 |
| Msa0405430 | Msa1365970 | 0.843724 | 1.174713e-58 | -8.615850e-47 |
| Msa0405440 | Msa1365970 | 0.893906 | 4.059584e-75 | -8.615850e-47 |
| Msa0405510 | Msa1365970 | 0.844714 | 6.373167e-59 | -8.615850e-47 |
| Msa0405520 | Msa1365970 | 0.824066 | 9.873688e-54 | -8.615850e-47 |
| Msa0405530 | Msa1365970 | 0.932832 | 4.704485e-95 | -8.615850e-47 |
| Msa0983630 | Msa1365970 | 0.869900 | 2.189507e-66 | -8.615850e-47 |
| Msa0983640 | Msa1365970 | 0.840423 | 8.775766e-58 | -8.615850e-47 |
| Msa1022050 | Msa1365970 | 0.891508 | 3.727407e-74 | -8.615850e-47 |
| Msa1022060 | Msa1365970 | 0.850815 | 1.330657e-60 | -8.615850e-47 |
| Msa1064410 | Msa1365970 | 0.855489 | 6.094548e-62 | -8.615850e-47 |
| Msa1086050 | Msa1365970 | 0.801675 | 8.051689e-49 | -8.615850e-47 |
| Msa1086080 | Msa1365970 | 0.814523 | 1.475079e-51 | -8.615850e-47 |
| Msa1086090 | Msa1365970 | 0.849645 | 2.830177e-60 | -8.615850e-47 |
| Msa1086100 | Msa1365970 | 0.807991 | 3.857461e-50 | -8.615850e-47 |
| Msa1086140 | Msa1365970 | 0.854508 | 1.175122e-61 | -8.615850e-47 |
| Msa1086190 | Msa1365970 | 0.829686 | 4.479752e-55 | -8.615850e-47 |
| Msa1086200 | Msa1365970 | 0.853297 | 2.622959e-61 | -8.615850e-47 |
| Msa1086250 | Msa1365970 | 0.813353 | 2.671530e-51 | -8.615850e-47 |
| Msa1086270 | Msa1365970 | 0.831937 | 1.257365e-55 | -8.615850e-47 |
| Msa1086280 | Msa1365970 | 0.801601 | 8.337770e-49 | -8.615850e-47 |
| Msa1086300 | Msa1365970 | 0.814376 | 1.589727e-51 | -8.615850e-47 |
| Msa1086320 | Msa1365970 | 0.813257 | 2.805322e-51 | -8.615850e-47 |
| Msa1086380 | Msa1365970 | 0.804884 | 1.743404e-49 | -8.615850e-47 |
| Msa1086430 | Msa1365970 | 0.803769 | 2.975912e-49 | -8.615850e-47 |
| Msa1086450 | Msa1365970 | 0.806435 | 8.236166e-50 | -8.615850e-47 |
| Msa1086470 | Msa1365970 | 0.821933 | 3.102419e-53 | -8.615850e-47 |
| Msa1086510 | Msa1365970 | 0.812842 | 3.458544e-51 | -8.615850e-47 |
| Msa1086550 | Msa1365970 | 0.825876 | 3.690045e-54 | -8.615850e-47 |
| Msa1086590 | Msa1365970 | 0.812848 | 3.447598e-51 | -8.615850e-47 |
| Msa1086600 | Msa1365970 | 0.855070 | 8.072963e-62 | -8.615850e-47 |
| Msa1086660 | Msa1365970 | 0.802821 | 4.676945e-49 | -8.615850e-47 |
| Msa1086670 | Msa1365970 | 0.807018 | 6.202927e-50 | -8.615850e-47 |
| Msa1086720 | Msa1365970 | 0.854953 | 8.729022e-62 | -8.615850e-47 |
| Msa1086730 | Msa1365970 | 0.859400 | 4.244849e-63 | -8.615850e-47 |
| Msa1086740 | Msa1365970 | 0.938764 | 3.920586e-99 | -8.615850e-47 |
| Msa1086790 | Msa1365970 | 0.912991 | 1.031791e-83 | -8.615850e-47 |
| Msa1086800 | Msa1365970 | 0.861645 | 8.872220e-64 | -8.615850e-47 |
| Msa1086860 | Msa1365970 | 0.808022 | 3.798883e-50 | -8.615850e-47 |
| Msa1086880 | Msa1365970 | 0.806793 | 6.922777e-50 | -8.615850e-47 |
| Msa1086890 | Msa1365970 | 0.818702 | 1.707826e-52 | -8.615850e-47 |
| Msa1086900 | Msa1365970 | 0.836936 | 6.987141e-57 | -8.615850e-47 |
| Msa1086960 | Msa1365970 | 0.923778 | 1.693824e-89 | -8.615850e-47 |
| Msa1086970 | Msa1365970 | 0.832564 | 8.795715e-56 | -8.615850e-47 |
| Msa1087030 | Msa1365970 | 0.861284 | 1.143362e-63 | -8.615850e-47 |
| Msa1087040 | Msa1365970 | 0.838626 | 2.572133e-57 | -8.615850e-47 |
| Msa1087050 | Msa1365970 | 0.946613 | 3.303883e-105 | -8.615850e-47 |
| Msa1087110 | Msa1365970 | 0.920477 | 1.217887e-87 | -8.615850e-47 |
| Msa1087120 | Msa1365970 | 0.839052 | 1.994926e-57 | -8.615850e-47 |
| Msa1091700 | Msa1365970 | 0.820188 | 7.827122e-53 | -8.615850e-47 |
| Msa0263770 | Msa1365970 | 0.881314 | 2.659657e-70 | -8.615850e-47 |
| Msa0268170 | Msa1365970 | 0.811753 | 5.980787e-51 | -8.615850e-47 |
| Msa0268190 | Msa1365970 | 0.826729 | 2.311658e-54 | -8.615850e-47 |
| Msa0268210 | Msa1365970 | 0.825980 | 3.485594e-54 | -8.615850e-47 |
| Msa0268250 | Msa1365970 | 0.845521 | 3.856639e-59 | -8.615850e-47 |
| Msa0268260 | Msa1365970 | 0.836135 | 1.117413e-56 | -8.615850e-47 |
| Msa0268270 | Msa1365970 | 0.922633 | 7.624548e-89 | -8.615850e-47 |
| Msa0268300 | Msa1365970 | 0.882688 | 8.445042e-71 | -8.615850e-47 |
| Msa0268310 | Msa1365970 | 0.842488 | 2.508668e-58 | -8.615850e-47 |
| Msa0268370 | Msa1365970 | 0.805328 | 1.407553e-49 | -8.615850e-47 |
| Msa0268390 | Msa1365970 | 0.807034 | 6.155301e-50 | -8.615850e-47 |
| Msa0268410 | Msa1365970 | 0.814899 | 1.217706e-51 | -8.615850e-47 |
| Msa0268430 | Msa1365970 | 0.832845 | 7.492716e-56 | -8.615850e-47 |
| Msa0268450 | Msa1365970 | 0.808478 | 3.036455e-50 | -8.615850e-47 |
| Msa0268530 | Msa1365970 | 0.811079 | 8.375458e-51 | -8.615850e-47 |
| Msa0268550 | Msa1365970 | 0.807870 | 4.092064e-50 | -8.615850e-47 |
| Msa0268560 | Msa1365970 | 0.818684 | 1.723552e-52 | -8.615850e-47 |
| Msa0268570 | Msa1365970 | 0.843207 | 1.615196e-58 | -8.615850e-47 |
| Msa0268580 | Msa1365970 | 0.814009 | 1.916268e-51 | -8.615850e-47 |
| Msa0268630 | Msa1365970 | 0.829718 | 4.400320e-55 | -8.615850e-47 |
| Msa0268660 | Msa1365970 | 0.812399 | 4.322983e-51 | -8.615850e-47 |
| Msa0268670 | Msa1365970 | 0.809044 | 2.298493e-50 | -8.615850e-47 |
| Msa0268720 | Msa1365970 | 0.806786 | 6.944418e-50 | -8.615850e-47 |
| Msa0268740 | Msa1365970 | 0.830232 | 3.297345e-55 | -8.615850e-47 |
| Msa0268750 | Msa1365970 | 0.847717 | 9.693983e-60 | -8.615850e-47 |
| Msa0268830 | Msa1365970 | 0.866059 | 3.761012e-65 | -8.615850e-47 |
| Msa0268840 | Msa1365970 | 0.807997 | 3.845911e-50 | -8.615850e-47 |
| Msa0268860 | Msa1365970 | 0.826785 | 2.242165e-54 | -8.615850e-47 |
| Msa0268880 | Msa1365970 | 0.806437 | 8.230516e-50 | -8.615850e-47 |
| Msa0268920 | Msa1365970 | 0.800575 | 1.351357e-48 | -8.615850e-47 |
| Msa0268940 | Msa1365970 | 0.803841 | 2.876043e-49 | -8.615850e-47 |
| Msa0268950 | Msa1365970 | 0.819272 | 1.267426e-52 | -8.615850e-47 |
| Msa0268960 | Msa1365970 | 0.851303 | 9.689054e-61 | -8.615850e-47 |
| Msa0269040 | Msa1365970 | 0.850960 | 1.210594e-60 | -8.615850e-47 |
| Msa0269050 | Msa1365970 | 0.810686 | 1.018711e-50 | -8.615850e-47 |
| Msa0269070 | Msa1365970 | 0.826105 | 3.255497e-54 | -8.615850e-47 |
| Msa0269130 | Msa1365970 | 0.830352 | 3.082151e-55 | -8.615850e-47 |
| Msa0269140 | Msa1365970 | 0.846363 | 2.277098e-59 | -8.615850e-47 |
| Msa0269150 | Msa1365970 | 0.944219 | 2.912564e-103 | -8.615850e-47 |
| Msa0344180 | Msa1365970 | 0.803186 | 3.931571e-49 | -8.615850e-47 |
| Msa0344190 | Msa1365970 | 0.827569 | 1.455262e-54 | -8.615850e-47 |
| Msa0344310 | Msa1365970 | 0.844189 | 8.819013e-59 | -8.615850e-47 |
| Msa1143120 | Msa1365970 | 0.842584 | 2.365262e-58 | -8.615850e-47 |
| Msa1143160 | Msa1365970 | 0.810444 | 1.149245e-50 | -8.615850e-47 |
| Msa1143170 | Msa1365970 | 0.846351 | 2.293966e-59 | -8.615850e-47 |
| Msa0484040 | Msa1365970 | 0.825231 | 5.248443e-54 | -8.615850e-47 |
| Msa0495270 | Msa1365970 | 0.802867 | 4.575087e-49 | -8.615850e-47 |
| Msa0582510 | Msa1365970 | 0.848844 | 4.731185e-60 | -8.615850e-47 |
| Msa0582540 | Msa1365970 | 0.822669 | 2.093488e-53 | -8.615850e-47 |
| Msa0582640 | Msa1365970 | 0.818873 | 1.561782e-52 | -8.615850e-47 |
| Msa0582650 | Msa1365970 | 0.836239 | 1.051611e-56 | -8.615850e-47 |
| Msa0582690 | Msa1365970 | 0.854525 | 1.161223e-61 | -8.615850e-47 |
| Msa0582700 | Msa1365970 | 0.814706 | 1.343642e-51 | -8.615850e-47 |
| Msa0582720 | Msa1365970 | 0.819009 | 1.454048e-52 | -8.615850e-47 |
| Msa0582730 | Msa1365970 | 0.816771 | 4.656798e-52 | -8.615850e-47 |
| Msa0582760 | Msa1365970 | 0.825775 | 3.900299e-54 | -8.615850e-47 |
| Msa0582770 | Msa1365970 | 0.840339 | 9.230137e-58 | -8.615850e-47 |
| Msa0582780 | Msa1365970 | 0.801196 | 1.009438e-48 | -8.615850e-47 |
| Msa0582810 | Msa1365970 | 0.859909 | 2.983565e-63 | -8.615850e-47 |
| Msa0582840 | Msa1365970 | 0.830885 | 2.281965e-55 | -8.615850e-47 |
| Msa0582890 | Msa1365970 | 0.806765 | 7.015431e-50 | -8.615850e-47 |
| Msa0582910 | Msa1365970 | 0.830476 | 2.874899e-55 | -8.615850e-47 |
| Msa0582920 | Msa1365970 | 0.849145 | 3.902194e-60 | -8.615850e-47 |
| Msa0591290 | Msa1365970 | 0.819656 | 1.035959e-52 | -8.615850e-47 |
| Msa0591310 | Msa1365970 | 0.850352 | 1.794839e-60 | -8.615850e-47 |
| Msa0591350 | Msa1365970 | 0.891809 | 2.830022e-74 | -8.615850e-47 |
| Msa0591360 | Msa1365970 | 0.828645 | 8.013299e-55 | -8.615850e-47 |
| Msa0591380 | Msa1365970 | 0.849458 | 3.193053e-60 | -8.615850e-47 |
| Msa0867680 | Msa1365970 | 0.874071 | 8.991864e-68 | -8.615850e-47 |
| Msa0867690 | Msa1365970 | 0.870316 | 1.599542e-66 | -8.615850e-47 |
| Msa0876520 | Msa1365970 | 0.856655 | 2.777548e-62 | -8.615850e-47 |
| Msa0908220 | Msa1365970 | 0.843467 | 1.376088e-58 | -8.615850e-47 |
| Msa0908230 | Msa1365970 | 0.854041 | 1.602704e-61 | -8.615850e-47 |
| Msa0908240 | Msa1365970 | 0.928772 | 1.797541e-92 | -8.615850e-47 |
| Msa0908310 | Msa1365970 | 0.901773 | 1.908684e-78 | -8.615850e-47 |
| Msa0908320 | Msa1365970 | 0.844542 | 7.087503e-59 | -8.615850e-47 |
| Msa0908370 | Msa1365970 | 0.905293 | 5.001057e-80 | -8.615850e-47 |
| Msa0908380 | Msa1365970 | 0.842493 | 2.500191e-58 | -8.615850e-47 |
| Msa0908430 | Msa1365970 | 0.854418 | 1.247511e-61 | -8.615850e-47 |
| Msa0908440 | Msa1365970 | 0.875128 | 3.932435e-68 | -8.615850e-47 |
| Msa0908450 | Msa1365970 | 0.934707 | 2.662385e-96 | -8.615850e-47 |
| Msa0908480 | Msa1365970 | 0.859153 | 5.035610e-63 | -8.615850e-47 |
| Msa0908530 | Msa1365970 | 0.903309 | 3.962393e-79 | -8.615850e-47 |
| Msa0908540 | Msa1365970 | 0.844802 | 6.031176e-59 | -8.615850e-47 |
| Msa0908590 | Msa1365970 | 0.836772 | 7.692872e-57 | -8.615850e-47 |
| Msa0908600 | Msa1365970 | 0.833915 | 4.053982e-56 | -8.615850e-47 |
| Msa0908610 | Msa1365970 | 0.915020 | 9.661038e-85 | -8.615850e-47 |
| Msa0908650 | Msa1365970 | 0.850625 | 1.504245e-60 | -8.615850e-47 |
| Msa0908660 | Msa1365970 | 0.832413 | 9.587171e-56 | -8.615850e-47 |
| Msa0908670 | Msa1365970 | 0.926375 | 5.113086e-91 | -8.615850e-47 |
| Msa0908720 | Msa1365970 | 0.900040 | 1.090167e-77 | -8.615850e-47 |
| Msa0908730 | Msa1365970 | 0.846682 | 1.863123e-59 | -8.615850e-47 |
| Msa0911190 | Msa1365970 | 0.896489 | 3.513288e-76 | -8.615850e-47 |
| Msa0911200 | Msa1365970 | 0.860175 | 2.480405e-63 | -8.615850e-47 |
| Msa0911230 | Msa1365970 | 0.882996 | 6.514165e-71 | -8.615850e-47 |
| Msa0924830 | Msa1365970 | 0.842906 | 1.941879e-58 | -8.615850e-47 |
| Msa0924870 | Msa1365970 | 0.814614 | 1.408213e-51 | -8.615850e-47 |
| Msa0924880 | Msa1365970 | 0.861910 | 7.356882e-64 | -8.615850e-47 |
| Msa0924920 | Msa1365970 | 0.864888 | 8.794248e-65 | -8.615850e-47 |
| Msa0924930 | Msa1365970 | 0.853294 | 2.628306e-61 | -8.615850e-47 |
| Msa0924940 | Msa1365970 | 0.867030 | 1.847583e-65 | -8.615850e-47 |
| Msa0924990 | Msa1365970 | 0.804636 | 1.964524e-49 | -8.615850e-47 |
| Msa0925100 | Msa1365970 | 0.908976 | 9.477083e-82 | -8.615850e-47 |
| Msa0925110 | Msa1365970 | 0.877764 | 4.838501e-69 | -8.615850e-47 |
| Msa0931070 | Msa1365970 | 0.854152 | 1.488426e-61 | -8.615850e-47 |
| Msa0931080 | Msa1365970 | 0.800742 | 1.249258e-48 | -8.615850e-47 |
| Msa0931110 | Msa1365970 | 0.824034 | 1.004099e-53 | -8.615850e-47 |
| Msa0931130 | Msa1365970 | 0.854471 | 1.204436e-61 | -8.615850e-47 |
| Msa0931160 | Msa1365970 | 0.818768 | 1.649528e-52 | -8.615850e-47 |
| Msa0931220 | Msa1365970 | 0.820380 | 7.074147e-53 | -8.615850e-47 |
| Msa0931230 | Msa1365970 | 0.854005 | 1.641173e-61 | -8.615850e-47 |
| Msa0931260 | Msa1365970 | 0.865285 | 6.597746e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365970 | MtrunA17_Chr7g0234981 | 88.636 | 88 | 10 | 0 | 70 | 157 | 6 | 93 | 2.85e-50 | 156 |
| Msa1365970 | MtrunA17_MTg0491661 | 67.470 | 83 | 27 | 0 | 75 | 157 | 41 | 123 | 8.51e-36 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365970 | ATCG00905.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa1365970 | ATCG01230.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa1365970 | AT2G07675.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
| Msa1365970 | ATMG00980.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
Find 39 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGCTAAAATAATTTATTT+TGG | 0.180484 | tig0018442:+50840 | None:intergenic |
| CAACAAGGTCGTTCTAAATA+TGG | 0.216871 | tig0018442:-50873 | Msa1365970:CDS |
| CAGAATGTTCTTGTAAATTA+TGG | 0.231614 | tig0018442:+50991 | None:intergenic |
| CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | tig0018442:-51835 | Msa1365970:CDS |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | tig0018442:+50901 | None:intergenic |
| ACTTTACGTAAGGCAGAGTT+TGG | 0.377633 | tig0018442:+51071 | None:intergenic |
| AACAAGGTCGTTCTAAATAT+GGG | 0.408379 | tig0018442:-50872 | Msa1365970:CDS |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | tig0018442:+50874 | None:intergenic |
| TTGTAAATTATGGCCAATAC+CGG | 0.438557 | tig0018442:+51001 | None:intergenic |
| CATTCTGTAGTCTTAGTAAG+AGG | 0.441296 | tig0018442:-50975 | Msa1365970:CDS |
| TATCACTACAACAAGCATAA+TGG | 0.443035 | tig0018442:-52041 | Msa1365970:intron |
| AACTCCAGTTACTTCGCAAA+TGG | 0.476097 | tig0018442:+52166 | None:intergenic |
| GCCAGAGTACGCTTAACCTC+TGG | 0.485872 | tig0018442:-51047 | Msa1365970:CDS |
| TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | tig0018442:+51843 | None:intergenic |
| ACTGCTTATATACCCGGTAT+TGG | 0.491318 | tig0018442:-51014 | Msa1365970:CDS |
| GATCGTTGGCACAAGAAAGA+AGG | 0.502174 | tig0018442:+52192 | None:intergenic |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | tig0018442:+50902 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | tig0018442:-50901 | Msa1365970:CDS |
| TTCGCAAATGGTAAGATCGT+TGG | 0.515541 | tig0018442:+52178 | None:intergenic |
| AAATGGATAAATCAGAACTA+AGG | 0.516319 | tig0018442:-52234 | Msa1365970:CDS |
| AGAACTAAGGCAAGATGAGA+TGG | 0.530899 | tig0018442:-52221 | Msa1365970:CDS |
| TACTCTGGCAACTTTACGTA+AGG | 0.546111 | tig0018442:+51061 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | tig0018442:-50974 | Msa1365970:CDS |
| GGTTCTGTAGAGTGGCAGTA+AGG | 0.572203 | tig0018442:-51135 | Msa1365970:intron |
| TCCAGAGGTTAAGCGTACTC+TGG | 0.572579 | tig0018442:+51046 | None:intergenic |
| GAAATCACTGCTTATATACC+CGG | 0.578898 | tig0018442:-51020 | Msa1365970:CDS |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | tig0018442:-50927 | Msa1365970:CDS |
| ATCGTTGGCACAAGAAAGAA+GGG | 0.587101 | tig0018442:+52193 | None:intergenic |
| ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | tig0018442:-51827 | Msa1365970:intron |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | tig0018442:-50973 | Msa1365970:CDS |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | tig0018442:-50888 | Msa1365970:CDS |
| TGTAAATTATGGCCAATACC+GGG | 0.601960 | tig0018442:+51002 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | tig0018442:-50909 | Msa1365970:CDS |
| AGCAGTGATTTCAAATCCAG+AGG | 0.620729 | tig0018442:+51031 | None:intergenic |
| GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | tig0018442:+51853 | None:intergenic |
| ACAAGGTCGTTCTAAATATG+GGG | 0.627597 | tig0018442:-50871 | Msa1365970:CDS |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | tig0018442:-50951 | Msa1365970:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | tig0018442:-50972 | Msa1365970:CDS |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | tig0018442:+50933 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | tig0018442:50997-51016 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | tig0018442:50998-51017 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | tig0018442:51001-51020 | Msa1365970:CDS | 10.0% |
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | tig0018442:50997-51016 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | tig0018442:50998-51017 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | tig0018442:51001-51020 | Msa1365970:CDS | 10.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | tig0018442:51437-51456 | Msa1365970:intron | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | tig0018442:51437-51456 | Msa1365970:intron | 15.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | tig0018442:51179-51198 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | tig0018442:51798-51817 | Msa1365970:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | tig0018442:51843-51862 | Msa1365970:CDS | 20.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | tig0018442:51179-51198 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | tig0018442:51798-51817 | Msa1365970:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | tig0018442:51843-51862 | Msa1365970:CDS | 20.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | tig0018442:50957-50976 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | tig0018442:50958-50977 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | tig0018442:51077-51096 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | tig0018442:51078-51097 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | tig0018442:51079-51098 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | tig0018442:51180-51199 | Msa1365970:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | tig0018442:51185-51204 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | tig0018442:51322-51341 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | tig0018442:51545-51564 | Msa1365970:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | tig0018442:51621-51640 | Msa1365970:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | tig0018442:51622-51641 | Msa1365970:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | tig0018442:51689-51708 | Msa1365970:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | tig0018442:51699-51718 | Msa1365970:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | tig0018442:51762-51781 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | tig0018442:51844-51863 | Msa1365970:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | tig0018442:51898-51917 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | tig0018442:52098-52117 | None:intergenic | 25.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | tig0018442:50957-50976 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | tig0018442:50958-50977 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | tig0018442:51077-51096 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | tig0018442:51078-51097 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | tig0018442:51079-51098 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | tig0018442:51180-51199 | Msa1365970:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | tig0018442:51185-51204 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | tig0018442:51322-51341 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | tig0018442:51545-51564 | Msa1365970:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | tig0018442:51621-51640 | Msa1365970:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | tig0018442:51622-51641 | Msa1365970:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | tig0018442:51689-51708 | Msa1365970:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | tig0018442:51699-51718 | Msa1365970:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | tig0018442:51762-51781 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | tig0018442:51844-51863 | Msa1365970:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | tig0018442:51898-51917 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | tig0018442:52098-52117 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | tig0018442:50952-50971 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | tig0018442:50991-51010 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | tig0018442:51045-51064 | Msa1365970:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | tig0018442:51122-51141 | Msa1365970:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | tig0018442:51678-51697 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | tig0018442:51679-51698 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | tig0018442:51677-51696 | Msa1365970:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | tig0018442:51694-51713 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | tig0018442:51692-51711 | Msa1365970:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | tig0018442:51698-51717 | Msa1365970:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | tig0018442:52088-52107 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | tig0018442:52112-52131 | Msa1365970:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | tig0018442:52214-52233 | Msa1365970:CDS | 30.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | tig0018442:50952-50971 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | tig0018442:50991-51010 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | tig0018442:51045-51064 | Msa1365970:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | tig0018442:51122-51141 | Msa1365970:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | tig0018442:51678-51697 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | tig0018442:51679-51698 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | tig0018442:51677-51696 | Msa1365970:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | tig0018442:51694-51713 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | tig0018442:51692-51711 | Msa1365970:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | tig0018442:51698-51717 | Msa1365970:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | tig0018442:52088-52107 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | tig0018442:52112-52131 | Msa1365970:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | tig0018442:52214-52233 | Msa1365970:CDS | 30.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | tig0018442:50990-51009 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | tig0018442:51109-51128 | Msa1365970:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | tig0018442:51115-51134 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | tig0018442:51213-51232 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | tig0018442:51476-51495 | Msa1365970:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | tig0018442:51504-51523 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | tig0018442:51676-51695 | Msa1365970:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | tig0018442:51900-51919 | Msa1365970:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | tig0018442:51928-51947 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | tig0018442:51930-51949 | Msa1365970:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | tig0018442:51998-52017 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | tig0018442:52008-52027 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | tig0018442:52009-52028 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | tig0018442:52066-52085 | Msa1365970:CDS | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | tig0018442:52087-52106 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | tig0018442:52111-52130 | Msa1365970:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | tig0018442:52113-52132 | Msa1365970:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | tig0018442:52215-52234 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | tig0018442:52213-52232 | Msa1365970:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | tig0018442:52215-52234 | Msa1365970:CDS | 35.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | tig0018442:50990-51009 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | tig0018442:51109-51128 | Msa1365970:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | tig0018442:51115-51134 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | tig0018442:51213-51232 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | tig0018442:51476-51495 | Msa1365970:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | tig0018442:51504-51523 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | tig0018442:51676-51695 | Msa1365970:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | tig0018442:51900-51919 | Msa1365970:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | tig0018442:51928-51947 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | tig0018442:51930-51949 | Msa1365970:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | tig0018442:51998-52017 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | tig0018442:52008-52027 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | tig0018442:52009-52028 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | tig0018442:52066-52085 | Msa1365970:CDS | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | tig0018442:52087-52106 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | tig0018442:52111-52130 | Msa1365970:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | tig0018442:52113-52132 | Msa1365970:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | tig0018442:52215-52234 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | tig0018442:52213-52232 | Msa1365970:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | tig0018442:52215-52234 | Msa1365970:CDS | 35.0% |
| AGAACTAAGGCAAGATGAGA+TGG | - | tig0018442:50865-50884 | Msa1365970:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | tig0018442:50896-50915 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | tig0018442:50911-50930 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | tig0018442:50916-50935 | Msa1365970:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | tig0018442:50923-50942 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | tig0018442:50989-51008 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | tig0018442:51108-51127 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | tig0018442:51162-51181 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | tig0018442:51166-51185 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | tig0018442:51287-51306 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | tig0018442:51286-51305 | Msa1365970:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | tig0018442:51634-51653 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | tig0018442:51655-51674 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | tig0018442:51848-51867 | Msa1365970:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | tig0018442:52007-52026 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | tig0018442:52018-52037 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | tig0018442:52028-52047 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | tig0018442:52058-52077 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | tig0018442:52072-52091 | Msa1365970:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | tig0018442:52114-52133 | Msa1365970:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | tig0018442:52156-52175 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | tig0018442:52159-52178 | Msa1365970:intron | 40.0% | |
| AGAACTAAGGCAAGATGAGA+TGG | - | tig0018442:50865-50884 | Msa1365970:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | tig0018442:50896-50915 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | tig0018442:50911-50930 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | tig0018442:50916-50935 | Msa1365970:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | tig0018442:50923-50942 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | tig0018442:50989-51008 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | tig0018442:51108-51127 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | tig0018442:51162-51181 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | tig0018442:51166-51185 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | tig0018442:51287-51306 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | tig0018442:51286-51305 | Msa1365970:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | tig0018442:51634-51653 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | tig0018442:51655-51674 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | tig0018442:51848-51867 | Msa1365970:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | tig0018442:52007-52026 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | tig0018442:52018-52037 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | tig0018442:52028-52047 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | tig0018442:52058-52077 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | tig0018442:52072-52091 | Msa1365970:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | tig0018442:52114-52133 | Msa1365970:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | tig0018442:52156-52175 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | tig0018442:52159-52178 | Msa1365970:intron | 40.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | tig0018442:50897-50916 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | tig0018442:50988-51007 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | tig0018442:51200-51219 | Msa1365970:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | tig0018442:51204-51223 | Msa1365970:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | tig0018442:51210-51229 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | tig0018442:51258-51277 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | tig0018442:51259-51278 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | tig0018442:51260-51279 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | tig0018442:51259-51278 | Msa1365970:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | tig0018442:51605-51624 | Msa1365970:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | tig0018442:51709-51728 | Msa1365970:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | tig0018442:51853-51872 | Msa1365970:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | tig0018442:51870-51889 | Msa1365970:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | tig0018442:51943-51962 | Msa1365970:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | tig0018442:52118-52137 | Msa1365970:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | tig0018442:52119-52138 | Msa1365970:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | tig0018442:52135-52154 | Msa1365970:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | tig0018442:52187-52206 | None:intergenic | 45.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | tig0018442:50897-50916 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | tig0018442:50988-51007 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | tig0018442:51200-51219 | Msa1365970:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | tig0018442:51204-51223 | Msa1365970:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | tig0018442:51210-51229 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | tig0018442:51258-51277 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | tig0018442:51259-51278 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | tig0018442:51260-51279 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | tig0018442:51259-51278 | Msa1365970:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | tig0018442:51605-51624 | Msa1365970:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | tig0018442:51709-51728 | Msa1365970:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | tig0018442:51853-51872 | Msa1365970:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | tig0018442:51870-51889 | Msa1365970:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | tig0018442:51943-51962 | Msa1365970:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | tig0018442:52118-52137 | Msa1365970:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | tig0018442:52119-52138 | Msa1365970:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | tig0018442:52135-52154 | Msa1365970:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | tig0018442:52187-52206 | None:intergenic | 45.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | tig0018442:50987-51006 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | tig0018442:51637-51656 | Msa1365970:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | tig0018442:51912-51931 | Msa1365970:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | tig0018442:51951-51970 | Msa1365970:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | tig0018442:52043-52062 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | tig0018442:52125-52144 | Msa1365970:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | tig0018442:52188-52207 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | tig0018442:52185-52204 | Msa1365970:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | tig0018442:52198-52217 | Msa1365970:CDS | 50.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | tig0018442:50987-51006 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | tig0018442:51637-51656 | Msa1365970:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | tig0018442:51912-51931 | Msa1365970:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | tig0018442:51951-51970 | Msa1365970:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | tig0018442:52043-52062 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | tig0018442:52125-52144 | Msa1365970:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | tig0018442:52188-52207 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | tig0018442:52185-52204 | Msa1365970:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | tig0018442:52198-52217 | Msa1365970:CDS | 50.0% | |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | tig0018442:50986-51005 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | tig0018442:51587-51606 | Msa1365970:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | tig0018442:51588-51607 | Msa1365970:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | tig0018442:51596-51615 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | tig0018442:52039-52058 | Msa1365970:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | tig0018442:52177-52196 | Msa1365970:intron | 55.0% | |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | tig0018442:50986-51005 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | tig0018442:51587-51606 | Msa1365970:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | tig0018442:51588-51607 | Msa1365970:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | tig0018442:51596-51615 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | tig0018442:52039-52058 | Msa1365970:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | tig0018442:52177-52196 | Msa1365970:intron | 55.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | tig0018442:51236-51255 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | tig0018442:51253-51272 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | tig0018442:51251-51270 | Msa1365970:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | tig0018442:51592-51611 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | tig0018442:51589-51608 | Msa1365970:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | tig0018442:51593-51612 | None:intergenic | 60.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | tig0018442:51236-51255 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | tig0018442:51253-51272 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | tig0018442:51251-51270 | Msa1365970:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | tig0018442:51592-51611 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | tig0018442:51589-51608 | Msa1365970:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | tig0018442:51593-51612 | None:intergenic | 60.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | tig0018442:51246-51265 | None:intergenic | 65.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | tig0018442:51246-51265 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018442 | gene | 50854 | 52254 | 50854 | ID=Msa1365970;Name=Msa1365970 |
| tig0018442 | mRNA | 50854 | 52254 | 50854 | ID=Msa1365970-mRNA-1;Parent=Msa1365970;Name=Msa1365970-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.75|1|1|4|0|157 |
| tig0018442 | exon | 52178 | 52254 | 52178 | ID=Msa1365970-mRNA-1:exon:14884;Parent=Msa1365970-mRNA-1 |
| tig0018442 | exon | 52042 | 52085 | 52042 | ID=Msa1365970-mRNA-1:exon:14883;Parent=Msa1365970-mRNA-1 |
| tig0018442 | exon | 51828 | 51886 | 51828 | ID=Msa1365970-mRNA-1:exon:14882;Parent=Msa1365970-mRNA-1 |
| tig0018442 | exon | 50854 | 51147 | 50854 | ID=Msa1365970-mRNA-1:exon:14881;Parent=Msa1365970-mRNA-1 |
| tig0018442 | CDS | 52178 | 52254 | 52178 | ID=Msa1365970-mRNA-1:cds;Parent=Msa1365970-mRNA-1 |
| tig0018442 | CDS | 52042 | 52085 | 52042 | ID=Msa1365970-mRNA-1:cds;Parent=Msa1365970-mRNA-1 |
| tig0018442 | CDS | 51828 | 51886 | 51828 | ID=Msa1365970-mRNA-1:cds;Parent=Msa1365970-mRNA-1 |
| tig0018442 | CDS | 50854 | 51147 | 50854 | ID=Msa1365970-mRNA-1:cds;Parent=Msa1365970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
