Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268270 | AES69829.1 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 2.67e-75 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268270 | sp|A4GYN8|RR12B_POPTR | 95.876 | 97 | 4 | 0 | 61 | 157 | 39 | 135 | 3.89e-61 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268270 | G7J101 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 1.28e-75 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0202640 | Msa0268270 | 0.853567 | 2.193795e-61 | -8.615850e-47 |
| Msa0263770 | Msa0268270 | 0.884562 | 1.724932e-71 | -8.615850e-47 |
| Msa0268190 | Msa0268270 | 0.801864 | 7.361886e-49 | -8.615850e-47 |
| Msa0268210 | Msa0268270 | 0.807037 | 6.147035e-50 | -8.615850e-47 |
| Msa0268250 | Msa0268270 | 0.818058 | 2.389529e-52 | -8.615850e-47 |
| Msa0268260 | Msa0268270 | 0.866586 | 2.558176e-65 | -8.615850e-47 |
| Msa0268270 | Msa0268300 | 0.894723 | 1.885142e-75 | -8.615850e-47 |
| Msa0268270 | Msa0268310 | 0.834118 | 3.606182e-56 | -8.615850e-47 |
| Msa0268270 | Msa0268410 | 0.809507 | 1.828340e-50 | -8.615850e-47 |
| Msa0268270 | Msa0268430 | 0.809273 | 2.052548e-50 | -8.615850e-47 |
| Msa0268270 | Msa0268550 | 0.810291 | 1.240065e-50 | -8.615850e-47 |
| Msa0268270 | Msa0268560 | 0.837399 | 5.319780e-57 | -8.615850e-47 |
| Msa0268270 | Msa0268570 | 0.842580 | 2.370673e-58 | -8.615850e-47 |
| Msa0268270 | Msa0268580 | 0.814780 | 1.294018e-51 | -8.615850e-47 |
| Msa0268270 | Msa0268630 | 0.840909 | 6.545704e-58 | -8.615850e-47 |
| Msa0268270 | Msa0268640 | 0.803870 | 2.835956e-49 | -8.615850e-47 |
| Msa0268270 | Msa0268740 | 0.833875 | 4.148864e-56 | -8.615850e-47 |
| Msa0268270 | Msa0268750 | 0.851529 | 8.363927e-61 | -8.615850e-47 |
| Msa0268270 | Msa0268830 | 0.859914 | 2.974221e-63 | -8.615850e-47 |
| Msa0268270 | Msa0268840 | 0.805759 | 1.142895e-49 | -8.615850e-47 |
| Msa0268270 | Msa0268860 | 0.807686 | 4.478509e-50 | -8.615850e-47 |
| Msa0268270 | Msa0268950 | 0.832619 | 8.527262e-56 | -8.615850e-47 |
| Msa0268270 | Msa0268960 | 0.868040 | 8.773345e-66 | -8.615850e-47 |
| Msa0268270 | Msa0269040 | 0.861716 | 8.437719e-64 | -8.615850e-47 |
| Msa0268270 | Msa0269050 | 0.808967 | 2.387751e-50 | -8.615850e-47 |
| Msa0268270 | Msa0269070 | 0.802745 | 4.849430e-49 | -8.615850e-47 |
| Msa0268270 | Msa0269130 | 0.829948 | 3.868047e-55 | -8.615850e-47 |
| Msa0268270 | Msa0269140 | 0.880420 | 5.572253e-70 | -8.615850e-47 |
| Msa0268270 | Msa0269150 | 0.949327 | 1.593810e-107 | -8.615850e-47 |
| Msa0268270 | Msa0344180 | 0.803236 | 3.839124e-49 | -8.615850e-47 |
| Msa0268270 | Msa0344190 | 0.824663 | 7.144820e-54 | -8.615850e-47 |
| Msa0268270 | Msa0344310 | 0.846225 | 2.482952e-59 | -8.615850e-47 |
| Msa0268270 | Msa0370210 | 0.801445 | 8.976360e-49 | -8.615850e-47 |
| Msa0268270 | Msa0405420 | 0.849554 | 3.000654e-60 | -8.615850e-47 |
| Msa0268270 | Msa0405430 | 0.842259 | 2.884715e-58 | -8.615850e-47 |
| Msa0268270 | Msa0405440 | 0.905930 | 2.548932e-80 | -8.615850e-47 |
| Msa0268270 | Msa0405510 | 0.840108 | 1.060292e-57 | -8.615850e-47 |
| Msa0268270 | Msa0405520 | 0.833259 | 5.911474e-56 | -8.615850e-47 |
| Msa0268270 | Msa0405530 | 0.919134 | 6.580199e-87 | -8.615850e-47 |
| Msa0268270 | Msa0484040 | 0.825601 | 4.288162e-54 | -8.615850e-47 |
| Msa0268270 | Msa0582510 | 0.846461 | 2.140556e-59 | -8.615850e-47 |
| Msa0268270 | Msa0582540 | 0.806729 | 7.141853e-50 | -8.615850e-47 |
| Msa0268270 | Msa0582630 | 0.800715 | 1.265334e-48 | -8.615850e-47 |
| Msa0268270 | Msa0582640 | 0.848044 | 7.876301e-60 | -8.615850e-47 |
| Msa0268270 | Msa0582650 | 0.837846 | 4.085227e-57 | -8.615850e-47 |
| Msa0268270 | Msa0582690 | 0.846245 | 2.451666e-59 | -8.615850e-47 |
| Msa0268270 | Msa0582700 | 0.809022 | 2.323632e-50 | -8.615850e-47 |
| Msa0268270 | Msa0582730 | 0.805494 | 1.299082e-49 | -8.615850e-47 |
| Msa0268270 | Msa0582760 | 0.833991 | 3.879271e-56 | -8.615850e-47 |
| Msa0268270 | Msa0582770 | 0.843820 | 1.107205e-58 | -8.615850e-47 |
| Msa0268270 | Msa0582810 | 0.853165 | 2.861266e-61 | -8.615850e-47 |
| Msa0268270 | Msa0582840 | 0.809991 | 1.439109e-50 | -8.615850e-47 |
| Msa0268270 | Msa0582910 | 0.826480 | 2.650401e-54 | -8.615850e-47 |
| Msa0268270 | Msa0582920 | 0.845289 | 4.455507e-59 | -8.615850e-47 |
| Msa0268270 | Msa0591290 | 0.812554 | 3.999421e-51 | -8.615850e-47 |
| Msa0268270 | Msa0591310 | 0.858460 | 8.113594e-63 | -8.615850e-47 |
| Msa0268270 | Msa0591350 | 0.901960 | 1.577862e-78 | -8.615850e-47 |
| Msa0268270 | Msa0591360 | 0.830254 | 3.256750e-55 | -8.615850e-47 |
| Msa0268270 | Msa0591380 | 0.821426 | 4.062643e-53 | -8.615850e-47 |
| Msa0268270 | Msa0867680 | 0.888221 | 7.157257e-73 | -8.615850e-47 |
| Msa0268270 | Msa0867690 | 0.846933 | 1.590932e-59 | -8.615850e-47 |
| Msa0268270 | Msa0876520 | 0.846764 | 1.769935e-59 | -8.615850e-47 |
| Msa0268270 | Msa0908220 | 0.851005 | 1.176290e-60 | -8.615850e-47 |
| Msa0268270 | Msa0908230 | 0.871865 | 4.933672e-67 | -8.615850e-47 |
| Msa0268270 | Msa0908240 | 0.939914 | 5.690977e-100 | -8.615850e-47 |
| Msa0268270 | Msa0908310 | 0.900533 | 6.663157e-78 | -8.615850e-47 |
| Msa0268270 | Msa0908320 | 0.847977 | 8.215124e-60 | -8.615850e-47 |
| Msa0268270 | Msa0908370 | 0.896175 | 4.746983e-76 | -8.615850e-47 |
| Msa0268270 | Msa0908380 | 0.833398 | 5.456774e-56 | -8.615850e-47 |
| Msa0268270 | Msa0908430 | 0.857503 | 1.561843e-62 | -8.615850e-47 |
| Msa0268270 | Msa0908440 | 0.882253 | 1.216081e-70 | -8.615850e-47 |
| Msa0268270 | Msa0908450 | 0.936186 | 2.597032e-97 | -8.615850e-47 |
| Msa0268270 | Msa0908480 | 0.851443 | 8.848409e-61 | -8.615850e-47 |
| Msa0268270 | Msa0908530 | 0.910752 | 1.316932e-82 | -8.615850e-47 |
| Msa0268270 | Msa0908540 | 0.839873 | 1.221440e-57 | -8.615850e-47 |
| Msa0268270 | Msa0908590 | 0.832345 | 9.966663e-56 | -8.615850e-47 |
| Msa0268270 | Msa0908600 | 0.842192 | 3.003960e-58 | -8.615850e-47 |
| Msa0268270 | Msa0908610 | 0.922057 | 1.611036e-88 | -8.615850e-47 |
| Msa0268270 | Msa0908650 | 0.863584 | 2.242340e-64 | -8.615850e-47 |
| Msa0268270 | Msa0908660 | 0.858392 | 8.501869e-63 | -8.615850e-47 |
| Msa0268270 | Msa0908670 | 0.935156 | 1.319572e-96 | -8.615850e-47 |
| Msa0268270 | Msa0908720 | 0.902706 | 7.366015e-79 | -8.615850e-47 |
| Msa0268270 | Msa0908730 | 0.823905 | 1.076967e-53 | -8.615850e-47 |
| Msa0268270 | Msa0911190 | 0.907843 | 3.267204e-81 | -8.615850e-47 |
| Msa0268270 | Msa0911200 | 0.849032 | 4.194104e-60 | -8.615850e-47 |
| Msa0268270 | Msa0911230 | 0.882274 | 1.195081e-70 | -8.615850e-47 |
| Msa0268270 | Msa0924830 | 0.829637 | 4.604938e-55 | -8.615850e-47 |
| Msa0268270 | Msa0924870 | 0.808435 | 3.101752e-50 | -8.615850e-47 |
| Msa0268270 | Msa0924880 | 0.833067 | 6.597205e-56 | -8.615850e-47 |
| Msa0268270 | Msa0924920 | 0.865590 | 5.289200e-65 | -8.615850e-47 |
| Msa0268270 | Msa0924930 | 0.862232 | 5.861450e-64 | -8.615850e-47 |
| Msa0268270 | Msa0924940 | 0.856303 | 3.524782e-62 | -8.615850e-47 |
| Msa0268270 | Msa0925100 | 0.920688 | 9.321785e-88 | -8.615850e-47 |
| Msa0268270 | Msa0925110 | 0.859913 | 2.975904e-63 | -8.615850e-47 |
| Msa0268270 | Msa0931070 | 0.836291 | 1.020183e-56 | -8.615850e-47 |
| Msa0268270 | Msa0931110 | 0.800058 | 1.721978e-48 | -8.615850e-47 |
| Msa0268270 | Msa0931130 | 0.847177 | 1.363596e-59 | -8.615850e-47 |
| Msa0268270 | Msa0931220 | 0.824715 | 6.946074e-54 | -8.615850e-47 |
| Msa0268270 | Msa0931230 | 0.824852 | 6.447452e-54 | -8.615850e-47 |
| Msa0268270 | Msa0931260 | 0.864029 | 1.631647e-64 | -8.615850e-47 |
| Msa0268270 | Msa0983630 | 0.895398 | 9.956957e-76 | -8.615850e-47 |
| Msa0268270 | Msa0983640 | 0.851757 | 7.208097e-61 | -8.615850e-47 |
| Msa0268270 | Msa1022050 | 0.906784 | 1.024083e-80 | -8.615850e-47 |
| Msa0268270 | Msa1022060 | 0.849884 | 2.427890e-60 | -8.615850e-47 |
| Msa0268270 | Msa1064410 | 0.866683 | 2.384033e-65 | -8.615850e-47 |
| Msa0268270 | Msa1086080 | 0.829773 | 4.267279e-55 | -8.615850e-47 |
| Msa0268270 | Msa1086090 | 0.847871 | 8.789174e-60 | -8.615850e-47 |
| Msa0268270 | Msa1086140 | 0.840686 | 7.486678e-58 | -8.615850e-47 |
| Msa0268270 | Msa1086190 | 0.838909 | 2.172794e-57 | -8.615850e-47 |
| Msa0268270 | Msa1086200 | 0.858507 | 7.854336e-63 | -8.615850e-47 |
| Msa0268270 | Msa1086270 | 0.845477 | 3.964538e-59 | -8.615850e-47 |
| Msa0268270 | Msa1086470 | 0.802342 | 5.870212e-49 | -8.615850e-47 |
| Msa0268270 | Msa1086550 | 0.857478 | 1.588350e-62 | -8.615850e-47 |
| Msa0268270 | Msa1086590 | 0.829685 | 4.481714e-55 | -8.615850e-47 |
| Msa0268270 | Msa1086600 | 0.850835 | 1.313322e-60 | -8.615850e-47 |
| Msa0268270 | Msa1086720 | 0.870841 | 1.075320e-66 | -8.615850e-47 |
| Msa0268270 | Msa1086730 | 0.878613 | 2.437257e-69 | -8.615850e-47 |
| Msa0268270 | Msa1086740 | 0.950616 | 1.138737e-108 | -8.615850e-47 |
| Msa0268270 | Msa1086790 | 0.917464 | 5.142466e-86 | -8.615850e-47 |
| Msa0268270 | Msa1086800 | 0.860141 | 2.539870e-63 | -8.615850e-47 |
| Msa0268270 | Msa1086860 | 0.801755 | 7.751316e-49 | -8.615850e-47 |
| Msa0268270 | Msa1086890 | 0.834201 | 3.437528e-56 | -8.615850e-47 |
| Msa0268270 | Msa1086900 | 0.853159 | 2.872801e-61 | -8.615850e-47 |
| Msa0268270 | Msa1086960 | 0.916587 | 1.489401e-85 | -8.615850e-47 |
| Msa0268270 | Msa1086970 | 0.841702 | 4.047378e-58 | -8.615850e-47 |
| Msa0268270 | Msa1087030 | 0.849921 | 2.371110e-60 | -8.615850e-47 |
| Msa0268270 | Msa1087040 | 0.860554 | 1.905495e-63 | -8.615850e-47 |
| Msa0268270 | Msa1087050 | 0.925030 | 3.183557e-90 | -8.615850e-47 |
| Msa0268270 | Msa1087110 | 0.934414 | 4.192423e-96 | -8.615850e-47 |
| Msa0268270 | Msa1087120 | 0.825552 | 4.405451e-54 | -8.615850e-47 |
| Msa0268270 | Msa1091700 | 0.810749 | 9.875978e-51 | -8.615850e-47 |
| Msa0268270 | Msa1143120 | 0.853659 | 2.065272e-61 | -8.615850e-47 |
| Msa0268270 | Msa1143160 | 0.815313 | 9.854190e-52 | -8.615850e-47 |
| Msa0268270 | Msa1143170 | 0.845591 | 3.692109e-59 | -8.615850e-47 |
| Msa0268270 | Msa1305090 | 0.840258 | 9.691110e-58 | -8.615850e-47 |
| Msa0268270 | Msa1354420 | 0.905555 | 3.793588e-80 | -8.615850e-47 |
| Msa0268270 | Msa1354430 | 0.852330 | 4.956226e-61 | -8.615850e-47 |
| Msa0268270 | Msa1354480 | 0.848601 | 5.524246e-60 | -8.615850e-47 |
| Msa0268270 | Msa1354490 | 0.879547 | 1.139691e-69 | -8.615850e-47 |
| Msa0268270 | Msa1354500 | 0.941086 | 7.653391e-101 | -8.615850e-47 |
| Msa0268270 | Msa1354550 | 0.903402 | 3.601693e-79 | -8.615850e-47 |
| Msa0268270 | Msa1354560 | 0.856403 | 3.293888e-62 | -8.615850e-47 |
| Msa0268270 | Msa1354610 | 0.877483 | 6.060239e-69 | -8.615850e-47 |
| Msa0268270 | Msa1354620 | 0.869214 | 3.660291e-66 | -8.615850e-47 |
| Msa0268270 | Msa1354630 | 0.934322 | 4.829084e-96 | -8.615850e-47 |
| Msa0268270 | Msa1354680 | 0.925848 | 1.051248e-90 | -8.615850e-47 |
| Msa0268270 | Msa1354690 | 0.867018 | 1.863388e-65 | -8.615850e-47 |
| Msa0268270 | Msa1354700 | 0.837374 | 5.398546e-57 | -8.615850e-47 |
| Msa0268270 | Msa1354740 | 0.865097 | 7.561898e-65 | -8.615850e-47 |
| Msa0268270 | Msa1354750 | 0.879818 | 9.134144e-70 | -8.615850e-47 |
| Msa0268270 | Msa1354760 | 0.936849 | 8.981674e-98 | -8.615850e-47 |
| Msa0268270 | Msa1354810 | 0.910627 | 1.516068e-82 | -8.615850e-47 |
| Msa0268270 | Msa1354820 | 0.838889 | 2.198497e-57 | -8.615850e-47 |
| Msa0268270 | Msa1354910 | 0.831612 | 1.512069e-55 | -8.615850e-47 |
| Msa0268270 | Msa1354920 | 0.850523 | 1.607674e-60 | -8.615850e-47 |
| Msa0268270 | Msa1354980 | 0.906198 | 1.917687e-80 | -8.615850e-47 |
| Msa0268270 | Msa1354990 | 0.842622 | 2.310826e-58 | -8.615850e-47 |
| Msa0268270 | Msa1355080 | 0.845550 | 3.787730e-59 | -8.615850e-47 |
| Msa0268270 | Msa1355090 | 0.845397 | 4.165403e-59 | -8.615850e-47 |
| Msa0268270 | Msa1355100 | 0.801446 | 8.972090e-49 | -8.615850e-47 |
| Msa0268270 | Msa1365890 | 0.896409 | 3.792022e-76 | -8.615850e-47 |
| Msa0268270 | Msa1365900 | 0.837665 | 4.545373e-57 | -8.615850e-47 |
| Msa0268270 | Msa1365950 | 0.845019 | 5.271128e-59 | -8.615850e-47 |
| Msa0268270 | Msa1365960 | 0.847701 | 9.791856e-60 | -8.615850e-47 |
| Msa0268270 | Msa1365970 | 0.922633 | 7.624548e-89 | -8.615850e-47 |
| Msa0268270 | Msa1366080 | 0.901705 | 2.044847e-78 | -8.615850e-47 |
| Msa0268270 | Msa1366090 | 0.811015 | 8.649746e-51 | -8.615850e-47 |
| Msa0268270 | Msa1368230 | 0.875082 | 4.077271e-68 | -8.615850e-47 |
| Msa0268270 | Msa1368240 | 0.918293 | 1.864225e-86 | -8.615850e-47 |
| Msa0268270 | Msa1380600 | 0.821167 | 4.663641e-53 | -8.615850e-47 |
| Msa0268270 | Msa1380610 | 0.812725 | 3.668783e-51 | -8.615850e-47 |
| Msa0268270 | Msa1380620 | 0.805718 | 1.165765e-49 | -8.615850e-47 |
| Msa0268270 | Msa1385410 | 0.894156 | 3.214504e-75 | -8.615850e-47 |
| Msa0268270 | Msa1385420 | 0.828824 | 7.253285e-55 | -8.615850e-47 |
| Msa0268270 | Msa1391090 | 0.826552 | 2.548213e-54 | -8.615850e-47 |
| Msa0268270 | Msa1391100 | 0.862215 | 5.933888e-64 | -8.615850e-47 |
| Msa0268270 | Msa1391110 | 0.926326 | 5.471327e-91 | -8.615850e-47 |
| Msa0268270 | Msa1391160 | 0.850895 | 1.262872e-60 | -8.615850e-47 |
| Msa0268270 | Msa1391170 | 0.851108 | 1.100062e-60 | -8.615850e-47 |
| Msa0268270 | Msa1391220 | 0.847680 | 9.918718e-60 | -8.615850e-47 |
| Msa0268270 | Msa1391230 | 0.842532 | 2.441794e-58 | -8.615850e-47 |
| Msa0268270 | Msa1391240 | 0.920382 | 1.373782e-87 | -8.615850e-47 |
| Msa0268270 | Msa1394030 | 0.840124 | 1.049974e-57 | -8.615850e-47 |
| Msa0268270 | Msa1394040 | 0.838764 | 2.368264e-57 | -8.615850e-47 |
| Msa0268270 | Msa1394060 | 0.800657 | 1.300276e-48 | -8.615850e-47 |
| Msa0268270 | Msa1394150 | 0.827940 | 1.185175e-54 | -8.615850e-47 |
| Msa0268270 | Msa1394160 | 0.841228 | 5.397093e-58 | -8.615850e-47 |
| Msa0268270 | Msa1394210 | 0.847888 | 8.692946e-60 | -8.615850e-47 |
| Msa0268270 | Msa1394250 | 0.806741 | 7.100387e-50 | -8.615850e-47 |
| Msa0268270 | Msa1460120 | 0.856281 | 3.577639e-62 | -8.615850e-47 |
| Msa0268270 | Msa1460130 | 0.854848 | 9.362114e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268270 | MtrunA17_Chr7g0234981 | 88.636 | 88 | 10 | 0 | 70 | 157 | 6 | 93 | 2.85e-50 | 156 |
| Msa0268270 | MtrunA17_MTg0491661 | 67.470 | 83 | 27 | 0 | 75 | 157 | 41 | 123 | 8.51e-36 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268270 | ATCG00905.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa0268270 | ATCG01230.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa0268270 | AT2G07675.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
| Msa0268270 | ATMG00980.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
Find 39 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGCTAAAATAATTTATTT+TGG | 0.180484 | 2_2:+70160202 | None:intergenic |
| CAACAAGGTCGTTCTAAATA+TGG | 0.216871 | 2_2:-70160235 | Msa0268270:CDS |
| CAGAATGTTCTTGTAAATTA+TGG | 0.231614 | 2_2:+70160353 | None:intergenic |
| CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | 2_2:-70161197 | Msa0268270:CDS |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | 2_2:+70160263 | None:intergenic |
| ACTTTACGTAAGGCAGAGTT+TGG | 0.377633 | 2_2:+70160433 | None:intergenic |
| AACAAGGTCGTTCTAAATAT+GGG | 0.408379 | 2_2:-70160234 | Msa0268270:CDS |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | 2_2:+70160236 | None:intergenic |
| TTGTAAATTATGGCCAATAC+CGG | 0.438557 | 2_2:+70160363 | None:intergenic |
| CATTCTGTAGTCTTAGTAAG+AGG | 0.441296 | 2_2:-70160337 | Msa0268270:CDS |
| TATCACTACAACAAGCATAA+TGG | 0.443035 | 2_2:-70161403 | Msa0268270:intron |
| AACTCCAGTTACTTCGCAAA+TGG | 0.476097 | 2_2:+70161529 | None:intergenic |
| GCCAGAGTACGCTTAACCTC+TGG | 0.485872 | 2_2:-70160409 | Msa0268270:CDS |
| TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | 2_2:+70161205 | None:intergenic |
| ACTGCTTATATACCCGGTAT+TGG | 0.491318 | 2_2:-70160376 | Msa0268270:CDS |
| GATCGTTGGCACAAGAAAGA+AGG | 0.502174 | 2_2:+70161555 | None:intergenic |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | 2_2:+70160264 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | 2_2:-70160263 | Msa0268270:CDS |
| TTCGCAAATGGTAAGATCGT+TGG | 0.515541 | 2_2:+70161541 | None:intergenic |
| AAATGGATAAATCAGAACTA+AGG | 0.516319 | 2_2:-70161597 | Msa0268270:CDS |
| AGAACTAAGGCAAGATGAGA+TGG | 0.530899 | 2_2:-70161584 | Msa0268270:CDS |
| TACTCTGGCAACTTTACGTA+AGG | 0.546111 | 2_2:+70160423 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | 2_2:-70160336 | Msa0268270:CDS |
| GGTTCTGTAGAGTGGCAGTA+AGG | 0.572203 | 2_2:-70160497 | Msa0268270:intron |
| TCCAGAGGTTAAGCGTACTC+TGG | 0.572579 | 2_2:+70160408 | None:intergenic |
| GAAATCACTGCTTATATACC+CGG | 0.578898 | 2_2:-70160382 | Msa0268270:CDS |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | 2_2:-70160289 | Msa0268270:CDS |
| ATCGTTGGCACAAGAAAGAA+GGG | 0.587101 | 2_2:+70161556 | None:intergenic |
| ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | 2_2:-70161189 | Msa0268270:intron |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | 2_2:-70160335 | Msa0268270:CDS |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | 2_2:-70160250 | Msa0268270:CDS |
| TGTAAATTATGGCCAATACC+GGG | 0.601960 | 2_2:+70160364 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | 2_2:-70160271 | Msa0268270:CDS |
| AGCAGTGATTTCAAATCCAG+AGG | 0.620729 | 2_2:+70160393 | None:intergenic |
| GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | 2_2:+70161215 | None:intergenic |
| ACAAGGTCGTTCTAAATATG+GGG | 0.627597 | 2_2:-70160233 | Msa0268270:CDS |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | 2_2:-70160313 | Msa0268270:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | 2_2:-70160334 | Msa0268270:CDS |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | 2_2:+70160295 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr2_2:70160360-70160379 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr2_2:70160361-70160380 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr2_2:70160364-70160383 | Msa0268270:CDS | 10.0% |
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr2_2:70160360-70160379 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr2_2:70160361-70160380 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr2_2:70160364-70160383 | Msa0268270:CDS | 10.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr2_2:70160800-70160819 | Msa0268270:intron | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr2_2:70160800-70160819 | Msa0268270:intron | 15.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr2_2:70160542-70160561 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr2_2:70161161-70161180 | Msa0268270:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr2_2:70161206-70161225 | Msa0268270:CDS | 20.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr2_2:70160542-70160561 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr2_2:70161161-70161180 | Msa0268270:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr2_2:70161206-70161225 | Msa0268270:CDS | 20.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr2_2:70160319-70160338 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr2_2:70160320-70160339 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr2_2:70160440-70160459 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr2_2:70160441-70160460 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr2_2:70160442-70160461 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr2_2:70160543-70160562 | Msa0268270:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr2_2:70160548-70160567 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr2_2:70160685-70160704 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr2_2:70160908-70160927 | Msa0268270:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr2_2:70160984-70161003 | Msa0268270:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr2_2:70160985-70161004 | Msa0268270:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr2_2:70161052-70161071 | Msa0268270:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr2_2:70161062-70161081 | Msa0268270:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr2_2:70161125-70161144 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr2_2:70161207-70161226 | Msa0268270:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr2_2:70161261-70161280 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr2_2:70161461-70161480 | None:intergenic | 25.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr2_2:70160319-70160338 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr2_2:70160320-70160339 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr2_2:70160440-70160459 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr2_2:70160441-70160460 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr2_2:70160442-70160461 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr2_2:70160543-70160562 | Msa0268270:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr2_2:70160548-70160567 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr2_2:70160685-70160704 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr2_2:70160908-70160927 | Msa0268270:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr2_2:70160984-70161003 | Msa0268270:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr2_2:70160985-70161004 | Msa0268270:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr2_2:70161052-70161071 | Msa0268270:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr2_2:70161062-70161081 | Msa0268270:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr2_2:70161125-70161144 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr2_2:70161207-70161226 | Msa0268270:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr2_2:70161261-70161280 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr2_2:70161461-70161480 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr2_2:70160314-70160333 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr2_2:70160354-70160373 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr2_2:70160408-70160427 | Msa0268270:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr2_2:70160485-70160504 | Msa0268270:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr2_2:70161041-70161060 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr2_2:70161042-70161061 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr2_2:70161040-70161059 | Msa0268270:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr2_2:70161057-70161076 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr2_2:70161055-70161074 | Msa0268270:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr2_2:70161061-70161080 | Msa0268270:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr2_2:70161451-70161470 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr2_2:70161475-70161494 | Msa0268270:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr2_2:70161577-70161596 | Msa0268270:CDS | 30.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr2_2:70160314-70160333 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr2_2:70160354-70160373 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr2_2:70160408-70160427 | Msa0268270:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr2_2:70160485-70160504 | Msa0268270:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr2_2:70161041-70161060 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr2_2:70161042-70161061 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr2_2:70161040-70161059 | Msa0268270:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr2_2:70161057-70161076 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr2_2:70161055-70161074 | Msa0268270:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr2_2:70161061-70161080 | Msa0268270:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr2_2:70161451-70161470 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr2_2:70161475-70161494 | Msa0268270:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr2_2:70161577-70161596 | Msa0268270:CDS | 30.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr2_2:70160353-70160372 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr2_2:70160472-70160491 | Msa0268270:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr2_2:70160478-70160497 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr2_2:70160576-70160595 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr2_2:70160839-70160858 | Msa0268270:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr2_2:70160867-70160886 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr2_2:70161039-70161058 | Msa0268270:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr2_2:70161263-70161282 | Msa0268270:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr2_2:70161291-70161310 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr2_2:70161293-70161312 | Msa0268270:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr2_2:70161361-70161380 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr2_2:70161371-70161390 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr2_2:70161372-70161391 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr2_2:70161429-70161448 | Msa0268270:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr2_2:70161450-70161469 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr2_2:70161474-70161493 | Msa0268270:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr2_2:70161476-70161495 | Msa0268270:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr2_2:70161578-70161597 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr2_2:70161576-70161595 | Msa0268270:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr2_2:70161578-70161597 | Msa0268270:CDS | 35.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr2_2:70160353-70160372 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr2_2:70160472-70160491 | Msa0268270:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr2_2:70160478-70160497 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr2_2:70160576-70160595 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr2_2:70160839-70160858 | Msa0268270:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr2_2:70160867-70160886 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr2_2:70161039-70161058 | Msa0268270:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr2_2:70161263-70161282 | Msa0268270:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr2_2:70161291-70161310 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr2_2:70161293-70161312 | Msa0268270:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr2_2:70161361-70161380 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr2_2:70161371-70161390 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr2_2:70161372-70161391 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr2_2:70161429-70161448 | Msa0268270:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr2_2:70161450-70161469 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr2_2:70161474-70161493 | Msa0268270:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr2_2:70161476-70161495 | Msa0268270:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr2_2:70161578-70161597 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr2_2:70161576-70161595 | Msa0268270:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr2_2:70161578-70161597 | Msa0268270:CDS | 35.0% |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr2_2:70160227-70160246 | Msa0268270:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr2_2:70160258-70160277 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr2_2:70160273-70160292 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr2_2:70160278-70160297 | Msa0268270:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr2_2:70160285-70160304 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr2_2:70160352-70160371 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr2_2:70160471-70160490 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr2_2:70160525-70160544 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr2_2:70160529-70160548 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr2_2:70160650-70160669 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr2_2:70160649-70160668 | Msa0268270:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr2_2:70160997-70161016 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr2_2:70161018-70161037 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr2_2:70161211-70161230 | Msa0268270:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr2_2:70161370-70161389 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr2_2:70161381-70161400 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr2_2:70161391-70161410 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr2_2:70161421-70161440 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr2_2:70161435-70161454 | Msa0268270:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr2_2:70161477-70161496 | Msa0268270:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr2_2:70161519-70161538 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr2_2:70161522-70161541 | Msa0268270:intron | 40.0% | |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr2_2:70160227-70160246 | Msa0268270:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr2_2:70160258-70160277 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr2_2:70160273-70160292 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr2_2:70160278-70160297 | Msa0268270:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr2_2:70160285-70160304 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr2_2:70160352-70160371 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr2_2:70160471-70160490 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr2_2:70160525-70160544 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr2_2:70160529-70160548 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr2_2:70160650-70160669 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr2_2:70160649-70160668 | Msa0268270:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr2_2:70160997-70161016 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr2_2:70161018-70161037 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr2_2:70161211-70161230 | Msa0268270:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr2_2:70161370-70161389 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr2_2:70161381-70161400 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr2_2:70161391-70161410 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr2_2:70161421-70161440 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr2_2:70161435-70161454 | Msa0268270:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr2_2:70161477-70161496 | Msa0268270:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr2_2:70161519-70161538 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr2_2:70161522-70161541 | Msa0268270:intron | 40.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr2_2:70160259-70160278 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr2_2:70160351-70160370 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr2_2:70160563-70160582 | Msa0268270:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr2_2:70160567-70160586 | Msa0268270:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr2_2:70160573-70160592 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr2_2:70160621-70160640 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr2_2:70160622-70160641 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr2_2:70160623-70160642 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr2_2:70160622-70160641 | Msa0268270:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr2_2:70160968-70160987 | Msa0268270:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr2_2:70161072-70161091 | Msa0268270:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr2_2:70161216-70161235 | Msa0268270:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr2_2:70161233-70161252 | Msa0268270:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr2_2:70161306-70161325 | Msa0268270:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr2_2:70161481-70161500 | Msa0268270:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr2_2:70161482-70161501 | Msa0268270:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr2_2:70161498-70161517 | Msa0268270:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr2_2:70161550-70161569 | None:intergenic | 45.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr2_2:70160259-70160278 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr2_2:70160351-70160370 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr2_2:70160563-70160582 | Msa0268270:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr2_2:70160567-70160586 | Msa0268270:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr2_2:70160573-70160592 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr2_2:70160621-70160640 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr2_2:70160622-70160641 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr2_2:70160623-70160642 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr2_2:70160622-70160641 | Msa0268270:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr2_2:70160968-70160987 | Msa0268270:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr2_2:70161072-70161091 | Msa0268270:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr2_2:70161216-70161235 | Msa0268270:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr2_2:70161233-70161252 | Msa0268270:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr2_2:70161306-70161325 | Msa0268270:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr2_2:70161481-70161500 | Msa0268270:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr2_2:70161482-70161501 | Msa0268270:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr2_2:70161498-70161517 | Msa0268270:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr2_2:70161550-70161569 | None:intergenic | 45.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr2_2:70160350-70160369 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr2_2:70161000-70161019 | Msa0268270:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr2_2:70161275-70161294 | Msa0268270:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr2_2:70161314-70161333 | Msa0268270:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr2_2:70161406-70161425 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr2_2:70161488-70161507 | Msa0268270:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr2_2:70161551-70161570 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr2_2:70161548-70161567 | Msa0268270:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr2_2:70161561-70161580 | Msa0268270:CDS | 50.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr2_2:70160350-70160369 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr2_2:70161000-70161019 | Msa0268270:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr2_2:70161275-70161294 | Msa0268270:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr2_2:70161314-70161333 | Msa0268270:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr2_2:70161406-70161425 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr2_2:70161488-70161507 | Msa0268270:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr2_2:70161551-70161570 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr2_2:70161548-70161567 | Msa0268270:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr2_2:70161561-70161580 | Msa0268270:CDS | 50.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr2_2:70160348-70160367 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr2_2:70160349-70160368 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr2_2:70160950-70160969 | Msa0268270:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr2_2:70160951-70160970 | Msa0268270:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr2_2:70160959-70160978 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr2_2:70161402-70161421 | Msa0268270:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr2_2:70161540-70161559 | Msa0268270:intron | 55.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr2_2:70160348-70160367 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr2_2:70160349-70160368 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr2_2:70160950-70160969 | Msa0268270:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr2_2:70160951-70160970 | Msa0268270:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr2_2:70160959-70160978 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr2_2:70161402-70161421 | Msa0268270:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr2_2:70161540-70161559 | Msa0268270:intron | 55.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr2_2:70160599-70160618 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr2_2:70160616-70160635 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr2_2:70160614-70160633 | Msa0268270:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr2_2:70160955-70160974 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr2_2:70160952-70160971 | Msa0268270:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr2_2:70160956-70160975 | None:intergenic | 60.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr2_2:70160599-70160618 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr2_2:70160616-70160635 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr2_2:70160614-70160633 | Msa0268270:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr2_2:70160955-70160974 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr2_2:70160952-70160971 | Msa0268270:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr2_2:70160956-70160975 | None:intergenic | 60.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr2_2:70160609-70160628 | None:intergenic | 65.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr2_2:70160609-70160628 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 70160216 | 70161617 | 70160216 | ID=Msa0268270;Name=Msa0268270 |
| chr2_2 | mRNA | 70160216 | 70161617 | 70160216 | ID=Msa0268270-mRNA-1;Parent=Msa0268270;Name=Msa0268270-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.75|1|1|4|0|157 |
| chr2_2 | exon | 70161541 | 70161617 | 70161541 | ID=Msa0268270-mRNA-1:exon:22487;Parent=Msa0268270-mRNA-1 |
| chr2_2 | exon | 70161404 | 70161447 | 70161404 | ID=Msa0268270-mRNA-1:exon:22486;Parent=Msa0268270-mRNA-1 |
| chr2_2 | exon | 70161190 | 70161248 | 70161190 | ID=Msa0268270-mRNA-1:exon:22485;Parent=Msa0268270-mRNA-1 |
| chr2_2 | exon | 70160216 | 70160509 | 70160216 | ID=Msa0268270-mRNA-1:exon:22484;Parent=Msa0268270-mRNA-1 |
| chr2_2 | CDS | 70161541 | 70161617 | 70161541 | ID=Msa0268270-mRNA-1:cds;Parent=Msa0268270-mRNA-1 |
| chr2_2 | CDS | 70161404 | 70161447 | 70161404 | ID=Msa0268270-mRNA-1:cds;Parent=Msa0268270-mRNA-1 |
| chr2_2 | CDS | 70161190 | 70161248 | 70161190 | ID=Msa0268270-mRNA-1:cds;Parent=Msa0268270-mRNA-1 |
| chr2_2 | CDS | 70160216 | 70160509 | 70160216 | ID=Msa0268270-mRNA-1:cds;Parent=Msa0268270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
