AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0932900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0932900 MtrunA17_Chr6g0449731 72.626 179 3 1 1 133 41 219 5.13e-82 239
Msa0932900 MtrunA17_Chr6g0449751 72.222 180 4 1 1 134 41 220 8.59e-82 239
Msa0932900 MtrunA17_Chr6g0449771 72.222 180 4 1 1 134 41 220 8.59e-82 239
Msa0932900 MtrunA17_Chr6g0449761 71.591 176 4 1 1 130 41 216 1.14e-78 232
Msa0932900 MtrunA17_Chr1g0189841 61.538 182 22 3 1 134 41 222 2.21e-65 197
Msa0932900 MtrunA17_Chr4g0007041 61.326 181 23 2 1 134 41 221 1.35e-64 196
Msa0932900 MtrunA17_Chr2g0285871 61.326 181 23 2 1 134 41 221 1.83e-64 195
Msa0932900 MtrunA17_Chr4g0007051 60.773 181 24 2 1 134 41 221 4.47e-64 194
Msa0932900 MtrunA17_Chr4g0007031 60.773 181 24 2 1 134 41 221 5.05e-64 194
Msa0932900 MtrunA17_Chr5g0419971 60.773 181 24 2 1 134 41 221 5.05e-64 194
Msa0932900 MtrunA17_Chr5g0419981 60.773 181 24 2 1 134 41 221 5.05e-64 194
Msa0932900 MtrunA17_Chr6g0449781 57.222 180 30 3 1 134 41 219 3.84e-56 174
Msa0932900 MtrunA17_Chr1g0156131 50.877 171 36 2 7 129 39 209 1.62e-48 154
Msa0932900 MtrunA17_Chr2g0292831 49.133 173 40 2 5 129 40 212 1.23e-47 152
Msa0932900 MtrunA17_Chr2g0292901 49.711 173 39 2 5 129 41 213 1.04e-46 150
Msa0932900 MtrunA17_Chr2g0292861 49.419 172 38 3 7 129 7 178 4.59e-46 147
Msa0932900 MtrunA17_Chr2g0292841 50.000 172 37 3 7 129 7 178 6.16e-46 147
Msa0932900 MtrunA17_Chr6g0449791 50.000 168 37 2 1 121 41 208 3.77e-43 140
Msa0932900 MtrunA17_Chr1g0193671 44.330 97 52 1 32 128 119 213 7.94e-23 89.0
Msa0932900 MtrunA17_Chr1g0210761 46.602 103 51 2 27 129 109 207 9.28e-23 88.6
Msa0932900 MtrunA17_Chr2g0292911 43.220 118 19 2 7 76 7 124 2.45e-21 83.2
Msa0932900 MtrunA17_Chr7g0271211 44.898 98 52 1 32 129 116 211 2.37e-20 82.4
Msa0932900 MtrunA17_Chr8g0344021 34.416 154 50 3 3 108 39 189 7.40e-20 81.3
Msa0932900 MtrunA17_Chr1g0193421 42.857 98 54 1 32 129 120 215 2.21e-19 80.1
Msa0932900 MtrunA17_Chr5g0414971 34.270 178 66 4 1 129 44 219 2.36e-19 80.1
Msa0932900 MtrunA17_Chr1g0178711 39.796 98 55 2 32 129 128 221 2.27e-17 75.1
Msa0932900 MtrunA17_Chr2g0321601 43.299 97 50 3 34 129 111 203 2.16e-15 69.3
Msa0932900 MtrunA17_Chr2g0321581 42.000 100 53 3 31 129 109 204 2.49e-15 69.3
Msa0932900 MtrunA17_Chr2g0300561 32.749 171 63 5 4 126 37 203 3.14e-15 68.9
Msa0932900 MtrunA17_Chr2g0321591 42.000 100 53 3 31 129 109 204 3.52e-15 68.9
Msa0932900 MtrunA17_Chr4g0026191 40.404 99 54 3 32 129 111 205 3.60e-14 66.2
Msa0932900 MtrunA17_Chr4g0026201 40.000 100 55 3 31 129 110 205 3.68e-14 66.2
Msa0932900 MtrunA17_Chr2g0300581 38.144 97 56 2 31 127 112 204 2.42e-13 63.9
Msa0932900 MtrunA17_Chr3g0084521 35.354 99 59 2 31 129 111 204 2.51e-13 63.9
Msa0932900 MtrunA17_Chr2g0300591 38.542 96 55 2 31 126 112 203 2.78e-13 63.9
Msa0932900 MtrunA17_Chr8g0343911 40.206 97 54 2 31 127 110 202 4.93e-13 63.2
Msa0932900 MtrunA17_Chr4g0003361 34.343 99 60 2 31 129 108 201 5.53e-13 63.2
Msa0932900 MtrunA17_Chr8g0343921 36.449 107 64 2 23 129 101 203 8.97e-13 62.4
Msa0932900 MtrunA17_Chr3g0084531 34.343 99 60 2 31 129 112 205 1.32e-12 62.0
Msa0932900 MtrunA17_Chr3g0084511 34.343 99 60 2 31 129 111 204 1.51e-12 62.0
Msa0932900 MtrunA17_Chr2g0297231 35.714 98 58 2 32 129 113 205 5.04e-12 60.5
Msa0932900 MtrunA17_Chr2g0313961 35.714 98 58 2 32 129 113 205 5.80e-12 60.5
Msa0932900 MtrunA17_Chr2g0302171 34.694 98 59 2 32 129 113 205 5.86e-12 60.5
Msa0932900 MtrunA17_Chr2g0297241 35.714 98 58 2 32 129 113 205 9.04e-12 59.7
Msa0932900 MtrunA17_Chr8g0343954 33.333 105 65 2 25 129 106 205 1.12e-11 59.7
Msa0932900 MtrunA17_Chr8g0344051 37.374 99 57 2 31 129 115 208 1.83e-11 58.9
Msa0932900 MtrunA17_Chr8g0343934 32.381 105 66 2 25 129 106 205 3.55e-11 58.2
Msa0932900 MtrunA17_Chr8g0344041 32.323 99 62 2 31 129 116 209 3.68e-11 58.2
Msa0932900 MtrunA17_Chr8g0343961 33.333 105 65 2 25 129 106 205 4.27e-11 58.2
Msa0932900 MtrunA17_Chr2g0301611 33.333 99 61 2 31 129 112 205 5.30e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0932900 AT5G38940.1 49.153 177 42 2 1 129 45 221 5.49e-47 151
Msa0932900 AT5G38930.1 51.412 177 38 4 1 129 45 221 5.74e-47 151
Msa0932900 AT5G38940.2 49.153 177 42 2 1 129 69 245 8.37e-47 151
Msa0932900 AT5G38910.1 49.718 177 41 2 1 129 43 219 1.27e-46 150
Msa0932900 AT5G39110.1 48.876 178 42 4 1 129 43 220 3.29e-44 144
Msa0932900 AT5G38960.1 48.315 178 43 3 1 129 45 222 4.25e-44 144
Msa0932900 AT5G39130.1 47.753 178 44 3 1 129 42 219 1.01e-43 143
Msa0932900 AT5G39160.1 48.315 178 43 3 1 129 42 219 1.12e-43 143
Msa0932900 AT3G05950.1 50.000 178 40 4 1 129 44 221 1.26e-43 143
Msa0932900 AT5G39190.1 48.315 178 43 3 1 129 42 219 1.75e-43 142
Msa0932900 AT5G39120.1 48.315 178 43 4 1 129 42 219 8.15e-43 140
Msa0932900 AT5G39150.1 47.753 178 44 4 1 129 42 219 1.48e-42 140
Msa0932900 AT5G39180.1 47.753 178 44 4 1 129 42 219 2.58e-42 139
Msa0932900 AT5G39160.3 47.429 175 43 3 4 129 41 215 5.35e-41 136
Msa0932900 AT4G14630.1 46.067 178 47 3 1 129 45 222 8.82e-41 135
Msa0932900 AT3G04200.1 46.629 178 46 3 1 129 45 222 2.78e-39 132
Msa0932900 AT5G39160.2 67.000 100 32 1 31 129 98 197 5.92e-39 130
Msa0932900 AT5G39190.2 67.000 100 32 1 31 129 98 197 5.92e-39 130
Msa0932900 AT3G04150.1 45.506 178 48 3 1 129 44 221 4.84e-37 126
Msa0932900 AT3G04150.2 45.506 178 48 3 1 129 57 234 5.61e-37 126
Msa0932900 AT3G04170.1 42.286 175 55 3 1 129 44 218 6.34e-34 118
Msa0932900 AT3G04190.1 44.944 178 49 4 1 129 44 221 5.23e-33 115
Msa0932900 AT3G04180.1 41.573 178 55 3 1 129 44 221 5.43e-32 113
Msa0932900 AT5G38910.2 48.630 146 52 5 1 129 43 182 6.14e-31 109
Msa0932900 AT1G18970.1 47.000 100 51 1 32 131 123 220 3.62e-25 95.5
Msa0932900 AT1G18980.1 47.525 101 51 1 31 131 122 220 1.08e-23 91.7
Msa0932900 AT5G38950.1 65.625 64 22 0 58 121 2 65 2.60e-22 85.1
Msa0932900 AT1G02335.1 43.878 98 53 1 32 129 120 215 2.83e-22 88.2
Msa0932900 AT1G09560.1 45.455 99 52 1 32 130 120 216 9.52e-22 86.7
Msa0932900 AT3G10080.1 43.878 98 51 2 32 129 126 219 2.21e-20 83.2
Msa0932900 AT3G05930.1 43.878 98 53 1 32 129 120 215 2.30e-20 83.2
Msa0932900 AT3G10080.2 43.878 98 51 2 32 129 197 290 7.95e-20 83.2
Msa0932900 AT5G26700.1 44.898 98 49 2 32 129 117 209 9.56e-20 81.3
Msa0932900 AT1G10460.1 31.285 179 71 5 1 129 39 215 6.56e-18 76.6
Msa0932900 AT3G62020.2 42.000 100 55 2 31 129 89 186 7.27e-18 75.9
Msa0932900 AT3G62020.1 42.000 100 55 2 31 129 118 215 1.10e-17 76.3
Msa0932900 AT1G74820.1 33.645 107 69 1 23 129 121 225 6.50e-15 68.9
Msa0932900 AT5G61750.1 49.296 71 33 2 31 101 116 183 2.30e-13 64.3
Msa0932900 AT5G20630.1 42.466 73 40 1 31 103 113 183 8.99e-13 62.8

Find 24 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTGCTAATGCTGTATT+TGG 0.046653 6_3:-1315706 Msa0932900:CDS
TAGTAATAACACCTGGATTT+TGG 0.212711 6_3:+1315725 None:intergenic
TCATTTGCTGTAGCAAGCTT+TGG 0.355521 6_3:+1317278 None:intergenic
TTTATCCACTTGAAAAGCTT+TGG 0.360291 6_3:+1315651 None:intergenic
GGAAATGCAGTTGCCATTGC+TGG 0.378013 6_3:-1315757 Msa0932900:CDS
TTCCATACCCCACATTCAAT+TGG 0.409845 6_3:+1315776 None:intergenic
TGGAAGTGAATGAGACCAAT+TGG 0.411740 6_3:+1315796 None:intergenic
CTATTGCTAATGCTGTATTT+GGG 0.423500 6_3:-1315705 Msa0932900:CDS
TTCTTCTACTCGGTGAAAGA+AGG 0.467010 6_3:-1317254 Msa0932900:CDS
TTGGAGGGTACTCTTTATGT+CGG 0.467130 6_3:-1315889 Msa0932900:CDS
TGAGATTCTTATAGTGTTGG+AGG 0.480868 6_3:-1315905 Msa0932900:intron
TGGAGGGTACTCTTTATGTC+GGG 0.488039 6_3:-1315888 Msa0932900:CDS
TTCCAATTGAATGTGGGGTA+TGG 0.505417 6_3:-1315778 Msa0932900:CDS
CATTCACTTCCAATTGAATG+TGG 0.512147 6_3:-1315785 Msa0932900:CDS
ATTCACTTCCAATTGAATGT+GGG 0.537723 6_3:-1315784 Msa0932900:CDS
GGACTTAGCAGCCAAAATCC+AGG 0.549743 6_3:-1315736 Msa0932900:CDS
TTCACTTCCAATTGAATGTG+GGG 0.551943 6_3:-1315783 Msa0932900:CDS
AGCAAATGATTTCTTCTACT+CGG 0.553402 6_3:-1317264 Msa0932900:CDS
TGTGAATGGCAAATTCTGCA+AGG 0.584711 6_3:-1317303 Msa0932900:CDS
TTGGCTGCTAAGTCCAGCAA+TGG 0.600072 6_3:+1315744 None:intergenic
GAGATTCTTATAGTGTTGGA+GGG 0.619014 6_3:-1315904 Msa0932900:intron
GGAAATACATCAAATCCACT+TGG 0.640192 6_3:-1317233 Msa0932900:intron
ATCACAAAAGTACTCAACAA+AGG 0.644517 6_3:-1315835 Msa0932900:CDS
TTAGCAATAGTAATAACACC+TGG 0.687379 6_3:+1315718 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATTTTAATAATTTTA+AGG + chr6_3:1316199-1316218 None:intergenic 0.0%
!!! ATATTATTTTAATAATTTTA+AGG + chr6_3:1316199-1316218 None:intergenic 0.0%
!!! TAATACCATATTAATTTGAA+CGG + chr6_3:1316060-1316079 None:intergenic 15.0%
!!! TTAATAATTTTAAGGAGAAA+TGG + chr6_3:1316191-1316210 None:intergenic 15.0%
!!! TAATACCATATTAATTTGAA+CGG + chr6_3:1316060-1316079 None:intergenic 15.0%
!!! TTAATAATTTTAAGGAGAAA+TGG + chr6_3:1316191-1316210 None:intergenic 15.0%
!! GTATTATTACCATTCTATTA+TGG - chr6_3:1316074-1316093 Msa0932900:intron 20.0%
!! TTCGATAATATATGATTCTT+CGG + chr6_3:1316272-1316291 None:intergenic 20.0%
!! AAGAATCATATATTATCGAA+GGG - chr6_3:1316272-1316291 Msa0932900:intron 20.0%
!!! TTTTCTTAATTGGAAATATC+CGG - chr6_3:1316577-1316596 Msa0932900:intron 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG + chr6_3:1316807-1316826 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG + chr6_3:1316808-1316827 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG - chr6_3:1316807-1316826 Msa0932900:intron 20.0%
!! TATATAAACACTTACTAGTT+GGG - chr6_3:1316808-1316827 Msa0932900:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG + chr6_3:1316902-1316921 None:intergenic 20.0%
!! GTATTATTACCATTCTATTA+TGG - chr6_3:1316074-1316093 Msa0932900:intron 20.0%
!! TTCGATAATATATGATTCTT+CGG + chr6_3:1316272-1316291 None:intergenic 20.0%
!! AAGAATCATATATTATCGAA+GGG - chr6_3:1316272-1316291 Msa0932900:intron 20.0%
!!! TTTTCTTAATTGGAAATATC+CGG - chr6_3:1316577-1316596 Msa0932900:intron 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG + chr6_3:1316807-1316826 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG + chr6_3:1316808-1316827 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG - chr6_3:1316807-1316826 Msa0932900:intron 20.0%
!! TATATAAACACTTACTAGTT+GGG - chr6_3:1316808-1316827 Msa0932900:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG + chr6_3:1316902-1316921 None:intergenic 20.0%
! GAGATTCAAATTTAACAGTT+TGG + chr6_3:1315778-1315797 None:intergenic 25.0%
!!! ATAATTTTAAGGAGAAATGG+TGG + chr6_3:1316188-1316207 None:intergenic 25.0%
! GAAGAATCATATATTATCGA+AGG - chr6_3:1316271-1316290 Msa0932900:intron 25.0%
!!! AACGATTTGTTAAAATCGAA+AGG - chr6_3:1316375-1316394 Msa0932900:intron 25.0%
!!! ACGATTTGTTAAAATCGAAA+GGG - chr6_3:1316376-1316395 Msa0932900:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG - chr6_3:1316809-1316828 Msa0932900:intron 25.0%
! TCAAGTGGATAAAAATATAG+TGG - chr6_3:1317270-1317289 Msa0932900:CDS 25.0%
! ACAATCTTCAAAAACAATTC+TGG - chr6_3:1317293-1317312 Msa0932900:CDS 25.0%
! CAATCTTCAAAAACAATTCT+GGG - chr6_3:1317294-1317313 Msa0932900:CDS 25.0%
! GAGATTCAAATTTAACAGTT+TGG + chr6_3:1315778-1315797 None:intergenic 25.0%
!!! ATAATTTTAAGGAGAAATGG+TGG + chr6_3:1316188-1316207 None:intergenic 25.0%
! GAAGAATCATATATTATCGA+AGG - chr6_3:1316271-1316290 Msa0932900:intron 25.0%
!!! AACGATTTGTTAAAATCGAA+AGG - chr6_3:1316375-1316394 Msa0932900:intron 25.0%
!!! ACGATTTGTTAAAATCGAAA+GGG - chr6_3:1316376-1316395 Msa0932900:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG - chr6_3:1316809-1316828 Msa0932900:intron 25.0%
! TCAAGTGGATAAAAATATAG+TGG - chr6_3:1317270-1317289 Msa0932900:CDS 25.0%
! ACAATCTTCAAAAACAATTC+TGG - chr6_3:1317293-1317312 Msa0932900:CDS 25.0%
! CAATCTTCAAAAACAATTCT+GGG - chr6_3:1317294-1317313 Msa0932900:CDS 25.0%
AGCAAATGATTTCTTCTACT+CGG - chr6_3:1315647-1315666 Msa0932900:CDS 30.0%
AGTATCTCATTAACAGTAAC+CGG + chr6_3:1315717-1315736 None:intergenic 30.0%
GTTACTGTTAATGAGATACT+AGG - chr6_3:1315717-1315736 Msa0932900:CDS 30.0%
AGAATTACACCCTCAAAATA+TGG - chr6_3:1315980-1315999 Msa0932900:intron 30.0%
CGAAACCGTTCAAATTAATA+TGG - chr6_3:1316052-1316071 Msa0932900:intron 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG + chr6_3:1316130-1316149 None:intergenic 30.0%
ACTTCTCCAAAACATGAATA+TGG - chr6_3:1316135-1316154 Msa0932900:intron 30.0%
! TTTTATAGGCAGAGTTACTT+GGG - chr6_3:1316472-1316491 Msa0932900:intron 30.0%
! AGCAAACGTGTTTTCTTAAT+TGG - chr6_3:1316567-1316586 Msa0932900:intron 30.0%
TAAAAATGTCCCACATTGAA+GGG + chr6_3:1316838-1316857 None:intergenic 30.0%
TTAAAAATGTCCCACATTGA+AGG + chr6_3:1316839-1316858 None:intergenic 30.0%
CTATGAAAAAACTAGTGTGT+GGG + chr6_3:1316868-1316887 None:intergenic 30.0%
ACTATGAAAAAACTAGTGTG+TGG + chr6_3:1316869-1316888 None:intergenic 30.0%
!! ATCACAAAAGTACTCAACAA+AGG - chr6_3:1317076-1317095 Msa0932900:intron 30.0%
!! GATGTTTTTGTGTTTCCAAT+TGG - chr6_3:1317100-1317119 Msa0932900:intron 30.0%
ATTCACTTCCAATTGAATGT+GGG - chr6_3:1317127-1317146 Msa0932900:intron 30.0%
! TAGTAATAACACCTGGATTT+TGG + chr6_3:1317189-1317208 None:intergenic 30.0%
TTAGCAATAGTAATAACACC+TGG + chr6_3:1317196-1317215 None:intergenic 30.0%
ACTATTGCTAATGCTGTATT+TGG - chr6_3:1317205-1317224 Msa0932900:intron 30.0%
CTATTGCTAATGCTGTATTT+GGG - chr6_3:1317206-1317225 Msa0932900:intron 30.0%
!! AGAACTTCTGAAGAGATTTT+AGG + chr6_3:1317238-1317257 None:intergenic 30.0%
TTTATCCACTTGAAAAGCTT+TGG + chr6_3:1317263-1317282 None:intergenic 30.0%
AGCAAATGATTTCTTCTACT+CGG - chr6_3:1315647-1315666 Msa0932900:CDS 30.0%
AGTATCTCATTAACAGTAAC+CGG + chr6_3:1315717-1315736 None:intergenic 30.0%
GTTACTGTTAATGAGATACT+AGG - chr6_3:1315717-1315736 Msa0932900:CDS 30.0%
AGAATTACACCCTCAAAATA+TGG - chr6_3:1315980-1315999 Msa0932900:intron 30.0%
CGAAACCGTTCAAATTAATA+TGG - chr6_3:1316052-1316071 Msa0932900:intron 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG + chr6_3:1316130-1316149 None:intergenic 30.0%
ACTTCTCCAAAACATGAATA+TGG - chr6_3:1316135-1316154 Msa0932900:intron 30.0%
! TTTTATAGGCAGAGTTACTT+GGG - chr6_3:1316472-1316491 Msa0932900:intron 30.0%
! AGCAAACGTGTTTTCTTAAT+TGG - chr6_3:1316567-1316586 Msa0932900:intron 30.0%
TAAAAATGTCCCACATTGAA+GGG + chr6_3:1316838-1316857 None:intergenic 30.0%
TTAAAAATGTCCCACATTGA+AGG + chr6_3:1316839-1316858 None:intergenic 30.0%
CTATGAAAAAACTAGTGTGT+GGG + chr6_3:1316868-1316887 None:intergenic 30.0%
ACTATGAAAAAACTAGTGTG+TGG + chr6_3:1316869-1316888 None:intergenic 30.0%
!! ATCACAAAAGTACTCAACAA+AGG - chr6_3:1317076-1317095 Msa0932900:intron 30.0%
!! GATGTTTTTGTGTTTCCAAT+TGG - chr6_3:1317100-1317119 Msa0932900:intron 30.0%
ATTCACTTCCAATTGAATGT+GGG - chr6_3:1317127-1317146 Msa0932900:intron 30.0%
! TAGTAATAACACCTGGATTT+TGG + chr6_3:1317189-1317208 None:intergenic 30.0%
TTAGCAATAGTAATAACACC+TGG + chr6_3:1317196-1317215 None:intergenic 30.0%
ACTATTGCTAATGCTGTATT+TGG - chr6_3:1317205-1317224 Msa0932900:intron 30.0%
CTATTGCTAATGCTGTATTT+GGG - chr6_3:1317206-1317225 Msa0932900:intron 30.0%
!! AGAACTTCTGAAGAGATTTT+AGG + chr6_3:1317238-1317257 None:intergenic 30.0%
TTTATCCACTTGAAAAGCTT+TGG + chr6_3:1317263-1317282 None:intergenic 30.0%
GGAAATACATCAAATCCACT+TGG - chr6_3:1315678-1315697 Msa0932900:CDS 35.0%
ATACTAGGACTAAACACTCT+AGG - chr6_3:1315732-1315751 Msa0932900:CDS 35.0%
!!! CTCTAGGTATCTGTTGTTTT+TGG - chr6_3:1315748-1315767 Msa0932900:CDS 35.0%
CTTCGGTAGATGATAGAATT+TGG + chr6_3:1315800-1315819 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG + chr6_3:1315817-1315836 None:intergenic 35.0%
TTAATCGAACAGTTGTAGCT+GGG + chr6_3:1315934-1315953 None:intergenic 35.0%
!! ACGATTGAGCCATATTTTGA+GGG + chr6_3:1315992-1316011 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG + chr6_3:1315993-1316012 None:intergenic 35.0%
!! TTTTGGAGAAGTTAGAATGG+TGG + chr6_3:1316127-1316146 None:intergenic 35.0%
! GTAGTGCCATATTCATGTTT+TGG + chr6_3:1316144-1316163 None:intergenic 35.0%
GAATATGAACCTAAGACCAA+GGG - chr6_3:1316294-1316313 Msa0932900:intron 35.0%
AAGAACACTCTTAATACCGA+AGG - chr6_3:1316328-1316347 Msa0932900:intron 35.0%
AGAACACTCTTAATACCGAA+GGG - chr6_3:1316329-1316348 Msa0932900:intron 35.0%
! AAGCATCAACTGTGAGATTT+TGG - chr6_3:1316421-1316440 Msa0932900:intron 35.0%
!! ATTTTGGTGTGAAGAATGAG+TGG - chr6_3:1316437-1316456 Msa0932900:intron 35.0%
!! TTTTGGTGTGAAGAATGAGT+GGG - chr6_3:1316438-1316457 Msa0932900:intron 35.0%
CAAGTAACTCTGCCTATAAA+AGG + chr6_3:1316473-1316492 None:intergenic 35.0%
! CTTTTATAGGCAGAGTTACT+TGG - chr6_3:1316471-1316490 Msa0932900:intron 35.0%
TTTATAGGCAGAGTTACTTG+GGG - chr6_3:1316473-1316492 Msa0932900:intron 35.0%
TAAGAAAACACGTTTGCTTG+AGG + chr6_3:1316565-1316584 None:intergenic 35.0%
CAACACTATAAGAATCTCAG+TGG + chr6_3:1317005-1317024 None:intergenic 35.0%
CACTGAGATTCTTATAGTGT+TGG - chr6_3:1317003-1317022 Msa0932900:intron 35.0%
! TGAGATTCTTATAGTGTTGG+AGG - chr6_3:1317006-1317025 Msa0932900:intron 35.0%
! GAGATTCTTATAGTGTTGGA+GGG - chr6_3:1317007-1317026 Msa0932900:intron 35.0%
! TGAGTACTTTTGTGATGAGA+CGG + chr6_3:1317072-1317091 None:intergenic 35.0%
CATTCACTTCCAATTGAATG+TGG - chr6_3:1317126-1317145 Msa0932900:intron 35.0%
TTCACTTCCAATTGAATGTG+GGG - chr6_3:1317128-1317147 Msa0932900:intron 35.0%
TCTTCAAAAACAATTCTGGG+TGG - chr6_3:1317297-1317316 Msa0932900:CDS 35.0%
GGAAATACATCAAATCCACT+TGG - chr6_3:1315678-1315697 Msa0932900:CDS 35.0%
ATACTAGGACTAAACACTCT+AGG - chr6_3:1315732-1315751 Msa0932900:CDS 35.0%
!!! CTCTAGGTATCTGTTGTTTT+TGG - chr6_3:1315748-1315767 Msa0932900:CDS 35.0%
CTTCGGTAGATGATAGAATT+TGG + chr6_3:1315800-1315819 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG + chr6_3:1315817-1315836 None:intergenic 35.0%
TTAATCGAACAGTTGTAGCT+GGG + chr6_3:1315934-1315953 None:intergenic 35.0%
!! ACGATTGAGCCATATTTTGA+GGG + chr6_3:1315992-1316011 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG + chr6_3:1315993-1316012 None:intergenic 35.0%
!! TTTTGGAGAAGTTAGAATGG+TGG + chr6_3:1316127-1316146 None:intergenic 35.0%
! GTAGTGCCATATTCATGTTT+TGG + chr6_3:1316144-1316163 None:intergenic 35.0%
GAATATGAACCTAAGACCAA+GGG - chr6_3:1316294-1316313 Msa0932900:intron 35.0%
AAGAACACTCTTAATACCGA+AGG - chr6_3:1316328-1316347 Msa0932900:intron 35.0%
AGAACACTCTTAATACCGAA+GGG - chr6_3:1316329-1316348 Msa0932900:intron 35.0%
! AAGCATCAACTGTGAGATTT+TGG - chr6_3:1316421-1316440 Msa0932900:intron 35.0%
!! ATTTTGGTGTGAAGAATGAG+TGG - chr6_3:1316437-1316456 Msa0932900:intron 35.0%
!! TTTTGGTGTGAAGAATGAGT+GGG - chr6_3:1316438-1316457 Msa0932900:intron 35.0%
CAAGTAACTCTGCCTATAAA+AGG + chr6_3:1316473-1316492 None:intergenic 35.0%
! CTTTTATAGGCAGAGTTACT+TGG - chr6_3:1316471-1316490 Msa0932900:intron 35.0%
TTTATAGGCAGAGTTACTTG+GGG - chr6_3:1316473-1316492 Msa0932900:intron 35.0%
TAAGAAAACACGTTTGCTTG+AGG + chr6_3:1316565-1316584 None:intergenic 35.0%
CAACACTATAAGAATCTCAG+TGG + chr6_3:1317005-1317024 None:intergenic 35.0%
CACTGAGATTCTTATAGTGT+TGG - chr6_3:1317003-1317022 Msa0932900:intron 35.0%
! TGAGATTCTTATAGTGTTGG+AGG - chr6_3:1317006-1317025 Msa0932900:intron 35.0%
! GAGATTCTTATAGTGTTGGA+GGG - chr6_3:1317007-1317026 Msa0932900:intron 35.0%
! TGAGTACTTTTGTGATGAGA+CGG + chr6_3:1317072-1317091 None:intergenic 35.0%
CATTCACTTCCAATTGAATG+TGG - chr6_3:1317126-1317145 Msa0932900:intron 35.0%
TTCACTTCCAATTGAATGTG+GGG - chr6_3:1317128-1317147 Msa0932900:intron 35.0%
TCTTCAAAAACAATTCTGGG+TGG - chr6_3:1317297-1317316 Msa0932900:CDS 35.0%
TGTGAATGGCAAATTCTGCA+AGG - chr6_3:1315608-1315627 Msa0932900:CDS 40.0%
!! TCATTTGCTGTAGCAAGCTT+TGG + chr6_3:1315636-1315655 None:intergenic 40.0%
! TTCTTCTACTCGGTGAAAGA+AGG - chr6_3:1315657-1315676 Msa0932900:CDS 40.0%
ACTTGGTTCAAAAGTGACAC+CGG - chr6_3:1315695-1315714 Msa0932900:CDS 40.0%
CATCTACCGAAGTTGTTACT+AGG - chr6_3:1315808-1315827 Msa0932900:CDS 40.0%
AGTCTACCTTGCACAACTTT+GGG + chr6_3:1315880-1315899 None:intergenic 40.0%
TAGTCTACCTTGCACAACTT+TGG + chr6_3:1315881-1315900 None:intergenic 40.0%
GTTAATCGAACAGTTGTAGC+TGG + chr6_3:1315935-1315954 None:intergenic 40.0%
TTGAACGGTTTCGAATAGAG+CGG + chr6_3:1316045-1316064 None:intergenic 40.0%
GTCTCAGCACCATAATAGAA+TGG + chr6_3:1316086-1316105 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG + chr6_3:1316108-1316127 None:intergenic 40.0%
GGAATATGAACCTAAGACCA+AGG - chr6_3:1316293-1316312 Msa0932900:intron 40.0%
TTCTTAAGACCATAGTCCCT+TGG + chr6_3:1316313-1316332 None:intergenic 40.0%
TTAATACCGAAGGGACAGAA+AGG - chr6_3:1316338-1316357 Msa0932900:intron 40.0%
! TTTGGTGTGAAGAATGAGTG+GGG - chr6_3:1316439-1316458 Msa0932900:intron 40.0%
GTTCACCCGTTCACAAAATT+GGG - chr6_3:1316748-1316767 Msa0932900:intron 40.0%
ATGGGAAAAGTGACCTCTAA+GGG + chr6_3:1316789-1316808 None:intergenic 40.0%
TATGGGAAAAGTGACCTCTA+AGG + chr6_3:1316790-1316809 None:intergenic 40.0%
!! TCGTGTTGACTTTGCATCTA+GGG - chr6_3:1316949-1316968 Msa0932900:intron 40.0%
! TAAGAATCTCAGTGGCTCTA+GGG + chr6_3:1316997-1317016 None:intergenic 40.0%
ATAAGAATCTCAGTGGCTCT+AGG + chr6_3:1316998-1317017 None:intergenic 40.0%
!! TTGGAGGGTACTCTTTATGT+CGG - chr6_3:1317022-1317041 Msa0932900:intron 40.0%
! TTTGTGATGAGACGGTTTTC+TGG + chr6_3:1317064-1317083 None:intergenic 40.0%
TGGAAGTGAATGAGACCAAT+TGG + chr6_3:1317118-1317137 None:intergenic 40.0%
TTCCAATTGAATGTGGGGTA+TGG - chr6_3:1317133-1317152 Msa0932900:intron 40.0%
TTCCATACCCCACATTCAAT+TGG + chr6_3:1317138-1317157 None:intergenic 40.0%
!! TCTCACCAAAGCTTTTCAAG+TGG - chr6_3:1317255-1317274 Msa0932900:CDS 40.0%
TGTGAATGGCAAATTCTGCA+AGG - chr6_3:1315608-1315627 Msa0932900:CDS 40.0%
!! TCATTTGCTGTAGCAAGCTT+TGG + chr6_3:1315636-1315655 None:intergenic 40.0%
! TTCTTCTACTCGGTGAAAGA+AGG - chr6_3:1315657-1315676 Msa0932900:CDS 40.0%
ACTTGGTTCAAAAGTGACAC+CGG - chr6_3:1315695-1315714 Msa0932900:CDS 40.0%
CATCTACCGAAGTTGTTACT+AGG - chr6_3:1315808-1315827 Msa0932900:CDS 40.0%
AGTCTACCTTGCACAACTTT+GGG + chr6_3:1315880-1315899 None:intergenic 40.0%
TAGTCTACCTTGCACAACTT+TGG + chr6_3:1315881-1315900 None:intergenic 40.0%
GTTAATCGAACAGTTGTAGC+TGG + chr6_3:1315935-1315954 None:intergenic 40.0%
TTGAACGGTTTCGAATAGAG+CGG + chr6_3:1316045-1316064 None:intergenic 40.0%
GTCTCAGCACCATAATAGAA+TGG + chr6_3:1316086-1316105 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG + chr6_3:1316108-1316127 None:intergenic 40.0%
GGAATATGAACCTAAGACCA+AGG - chr6_3:1316293-1316312 Msa0932900:intron 40.0%
TTCTTAAGACCATAGTCCCT+TGG + chr6_3:1316313-1316332 None:intergenic 40.0%
TTAATACCGAAGGGACAGAA+AGG - chr6_3:1316338-1316357 Msa0932900:intron 40.0%
! TTTGGTGTGAAGAATGAGTG+GGG - chr6_3:1316439-1316458 Msa0932900:intron 40.0%
GTTCACCCGTTCACAAAATT+GGG - chr6_3:1316748-1316767 Msa0932900:intron 40.0%
ATGGGAAAAGTGACCTCTAA+GGG + chr6_3:1316789-1316808 None:intergenic 40.0%
TATGGGAAAAGTGACCTCTA+AGG + chr6_3:1316790-1316809 None:intergenic 40.0%
!! TCGTGTTGACTTTGCATCTA+GGG - chr6_3:1316949-1316968 Msa0932900:intron 40.0%
! TAAGAATCTCAGTGGCTCTA+GGG + chr6_3:1316997-1317016 None:intergenic 40.0%
ATAAGAATCTCAGTGGCTCT+AGG + chr6_3:1316998-1317017 None:intergenic 40.0%
!! TTGGAGGGTACTCTTTATGT+CGG - chr6_3:1317022-1317041 Msa0932900:intron 40.0%
! TTTGTGATGAGACGGTTTTC+TGG + chr6_3:1317064-1317083 None:intergenic 40.0%
TGGAAGTGAATGAGACCAAT+TGG + chr6_3:1317118-1317137 None:intergenic 40.0%
TTCCAATTGAATGTGGGGTA+TGG - chr6_3:1317133-1317152 Msa0932900:intron 40.0%
TTCCATACCCCACATTCAAT+TGG + chr6_3:1317138-1317157 None:intergenic 40.0%
!! TCTCACCAAAGCTTTTCAAG+TGG - chr6_3:1317255-1317274 Msa0932900:CDS 40.0%
!!! GGTGTCACTTTTGAACCAAG+TGG + chr6_3:1315696-1315715 None:intergenic 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG - chr6_3:1315849-1315868 Msa0932900:CDS 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG + chr6_3:1315919-1315938 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG - chr6_3:1316012-1316031 Msa0932900:intron 45.0%
GTGCTGAGACCACTCAAATA+TGG - chr6_3:1316096-1316115 Msa0932900:intron 45.0%
GTGGTATCACCATATCTGAG+TGG + chr6_3:1316169-1316188 None:intergenic 45.0%
AACCTAAGACCAAGGGACTA+TGG - chr6_3:1316301-1316320 Msa0932900:intron 45.0%
TCTACTCCTTTCTGTCCCTT+CGG + chr6_3:1316347-1316366 None:intergenic 45.0%
GCGTAAAACGCGTTTGCTTA+AGG + chr6_3:1316515-1316534 None:intergenic 45.0%
TGGAAATATCCGGAAGCTTC+TGG - chr6_3:1316587-1316606 Msa0932900:intron 45.0%
TATCCGGAAGCTTCTGGATA+CGG - chr6_3:1316593-1316612 Msa0932900:intron 45.0%
TTCTGGATACGGGTTTGGAT+CGG - chr6_3:1316604-1316623 Msa0932900:intron 45.0%
CGTTCACCCGTTCACAAAAT+TGG - chr6_3:1316747-1316766 Msa0932900:intron 45.0%
! GGGTACCCAATTTTGTGAAC+GGG + chr6_3:1316756-1316775 None:intergenic 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG + chr6_3:1316757-1316776 None:intergenic 45.0%
TCACAAAATTGGGTACCCCA+AGG - chr6_3:1316758-1316777 Msa0932900:intron 45.0%
CACAAAATTGGGTACCCCAA+GGG - chr6_3:1316759-1316778 Msa0932900:intron 45.0%
ACGAGCAAGAGAGATACTGT+TGG + chr6_3:1316933-1316952 None:intergenic 45.0%
!! CTCGTGTTGACTTTGCATCT+AGG - chr6_3:1316948-1316967 Msa0932900:intron 45.0%
!! CGTGTTGACTTTGCATCTAG+GGG - chr6_3:1316950-1316969 Msa0932900:intron 45.0%
!! TGGAGGGTACTCTTTATGTC+GGG - chr6_3:1317023-1317042 Msa0932900:intron 45.0%
!!! GGTGTCACTTTTGAACCAAG+TGG + chr6_3:1315696-1315715 None:intergenic 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG - chr6_3:1315849-1315868 Msa0932900:CDS 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG + chr6_3:1315919-1315938 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG - chr6_3:1316012-1316031 Msa0932900:intron 45.0%
GTGCTGAGACCACTCAAATA+TGG - chr6_3:1316096-1316115 Msa0932900:intron 45.0%
GTGGTATCACCATATCTGAG+TGG + chr6_3:1316169-1316188 None:intergenic 45.0%
AACCTAAGACCAAGGGACTA+TGG - chr6_3:1316301-1316320 Msa0932900:intron 45.0%
TCTACTCCTTTCTGTCCCTT+CGG + chr6_3:1316347-1316366 None:intergenic 45.0%
GCGTAAAACGCGTTTGCTTA+AGG + chr6_3:1316515-1316534 None:intergenic 45.0%
TGGAAATATCCGGAAGCTTC+TGG - chr6_3:1316587-1316606 Msa0932900:intron 45.0%
TATCCGGAAGCTTCTGGATA+CGG - chr6_3:1316593-1316612 Msa0932900:intron 45.0%
TTCTGGATACGGGTTTGGAT+CGG - chr6_3:1316604-1316623 Msa0932900:intron 45.0%
CGTTCACCCGTTCACAAAAT+TGG - chr6_3:1316747-1316766 Msa0932900:intron 45.0%
! GGGTACCCAATTTTGTGAAC+GGG + chr6_3:1316756-1316775 None:intergenic 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG + chr6_3:1316757-1316776 None:intergenic 45.0%
TCACAAAATTGGGTACCCCA+AGG - chr6_3:1316758-1316777 Msa0932900:intron 45.0%
CACAAAATTGGGTACCCCAA+GGG - chr6_3:1316759-1316778 Msa0932900:intron 45.0%
ACGAGCAAGAGAGATACTGT+TGG + chr6_3:1316933-1316952 None:intergenic 45.0%
!! CTCGTGTTGACTTTGCATCT+AGG - chr6_3:1316948-1316967 Msa0932900:intron 45.0%
!! CGTGTTGACTTTGCATCTAG+GGG - chr6_3:1316950-1316969 Msa0932900:intron 45.0%
!! TGGAGGGTACTCTTTATGTC+GGG - chr6_3:1317023-1317042 Msa0932900:intron 45.0%
! TACTAGGTTGAGTCACGACC+AGG - chr6_3:1315824-1315843 Msa0932900:CDS 50.0%
ACGTCTTAAAGAGAGCGACC+TGG + chr6_3:1315845-1315864 None:intergenic 50.0%
GCACTACCCAAAGTTGTGCA+AGG - chr6_3:1315871-1315890 Msa0932900:CDS 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG + chr6_3:1315913-1315932 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG + chr6_3:1315916-1315935 None:intergenic 50.0%
GCACTACGACCACTCAGATA+TGG - chr6_3:1316157-1316176 Msa0932900:intron 50.0%
! GACCATAGTCCCTTGGTCTT+AGG + chr6_3:1316306-1316325 None:intergenic 50.0%
GAGAAGAGAGAAAACCGCAC+AGG - chr6_3:1316398-1316417 Msa0932900:intron 50.0%
! CACAGTTGATGCTTCCTGTG+CGG + chr6_3:1316415-1316434 None:intergenic 50.0%
! AACGCGTTTTACGCGTGACT+TGG - chr6_3:1316521-1316540 Msa0932900:intron 50.0%
! ACGCGTTTTACGCGTGACTT+GGG - chr6_3:1316522-1316541 Msa0932900:intron 50.0%
ATCCGGAAGCTTCTGGATAC+GGG - chr6_3:1316594-1316613 Msa0932900:intron 50.0%
AACCCGTATCCAGAAGCTTC+CGG + chr6_3:1316599-1316618 None:intergenic 50.0%
GAAGCTTCTGGATACGGGTT+TGG - chr6_3:1316599-1316618 Msa0932900:intron 50.0%
TCTGGATACGGGTTTGGATC+GGG - chr6_3:1316605-1316624 Msa0932900:intron 50.0%
TTGGGGTGACCCTTCAATGT+GGG - chr6_3:1316826-1316845 Msa0932900:intron 50.0%
GGAAATGCAGTTGCCATTGC+TGG - chr6_3:1317154-1317173 Msa0932900:intron 50.0%
TTGGCTGCTAAGTCCAGCAA+TGG + chr6_3:1317170-1317189 None:intergenic 50.0%
GGACTTAGCAGCCAAAATCC+AGG - chr6_3:1317175-1317194 Msa0932900:intron 50.0%
! TACTAGGTTGAGTCACGACC+AGG - chr6_3:1315824-1315843 Msa0932900:CDS 50.0%
ACGTCTTAAAGAGAGCGACC+TGG + chr6_3:1315845-1315864 None:intergenic 50.0%
GCACTACCCAAAGTTGTGCA+AGG - chr6_3:1315871-1315890 Msa0932900:CDS 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG + chr6_3:1315913-1315932 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG + chr6_3:1315916-1315935 None:intergenic 50.0%
GCACTACGACCACTCAGATA+TGG - chr6_3:1316157-1316176 Msa0932900:intron 50.0%
! GACCATAGTCCCTTGGTCTT+AGG + chr6_3:1316306-1316325 None:intergenic 50.0%
GAGAAGAGAGAAAACCGCAC+AGG - chr6_3:1316398-1316417 Msa0932900:intron 50.0%
! CACAGTTGATGCTTCCTGTG+CGG + chr6_3:1316415-1316434 None:intergenic 50.0%
! AACGCGTTTTACGCGTGACT+TGG - chr6_3:1316521-1316540 Msa0932900:intron 50.0%
! ACGCGTTTTACGCGTGACTT+GGG - chr6_3:1316522-1316541 Msa0932900:intron 50.0%
ATCCGGAAGCTTCTGGATAC+GGG - chr6_3:1316594-1316613 Msa0932900:intron 50.0%
AACCCGTATCCAGAAGCTTC+CGG + chr6_3:1316599-1316618 None:intergenic 50.0%
GAAGCTTCTGGATACGGGTT+TGG - chr6_3:1316599-1316618 Msa0932900:intron 50.0%
TCTGGATACGGGTTTGGATC+GGG - chr6_3:1316605-1316624 Msa0932900:intron 50.0%
TTGGGGTGACCCTTCAATGT+GGG - chr6_3:1316826-1316845 Msa0932900:intron 50.0%
GGAAATGCAGTTGCCATTGC+TGG - chr6_3:1317154-1317173 Msa0932900:intron 50.0%
TTGGCTGCTAAGTCCAGCAA+TGG + chr6_3:1317170-1317189 None:intergenic 50.0%
GGACTTAGCAGCCAAAATCC+AGG - chr6_3:1317175-1317194 Msa0932900:intron 50.0%
CGGTTACGTACCGTATCGAG+TGG + chr6_3:1316025-1316044 None:intergenic 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG - chr6_3:1316458-1316477 Msa0932900:intron 55.0%
! CGCGTTTTACGCGTGACTTG+GGG - chr6_3:1316523-1316542 Msa0932900:intron 55.0%
GATACGGGTTTGGATCGGGT+CGG - chr6_3:1316609-1316628 Msa0932900:intron 55.0%
! ACCTCTAAGGGTGTGCCCTT+GGG + chr6_3:1316777-1316796 None:intergenic 55.0%
GTTGGGGTGACCCTTCAATG+TGG - chr6_3:1316825-1316844 Msa0932900:intron 55.0%
!! GCTCTAGGGTGAGTATGTGG+AGG + chr6_3:1316983-1317002 None:intergenic 55.0%
!! GTGGCTCTAGGGTGAGTATG+TGG + chr6_3:1316986-1317005 None:intergenic 55.0%
CGGTTACGTACCGTATCGAG+TGG + chr6_3:1316025-1316044 None:intergenic 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG - chr6_3:1316458-1316477 Msa0932900:intron 55.0%
! CGCGTTTTACGCGTGACTTG+GGG - chr6_3:1316523-1316542 Msa0932900:intron 55.0%
GATACGGGTTTGGATCGGGT+CGG - chr6_3:1316609-1316628 Msa0932900:intron 55.0%
! ACCTCTAAGGGTGTGCCCTT+GGG + chr6_3:1316777-1316796 None:intergenic 55.0%
GTTGGGGTGACCCTTCAATG+TGG - chr6_3:1316825-1316844 Msa0932900:intron 55.0%
!! GCTCTAGGGTGAGTATGTGG+AGG + chr6_3:1316983-1317002 None:intergenic 55.0%
!! GTGGCTCTAGGGTGAGTATG+TGG + chr6_3:1316986-1317005 None:intergenic 55.0%
! GTTTTATCCTGGAGGCGGCG+TGG + chr6_3:1315908-1315927 None:intergenic 60.0%
! CCTCTAAGGGTGTGCCCTTG+GGG + chr6_3:1316776-1316795 None:intergenic 60.0%
! GACCTCTAAGGGTGTGCCCT+TGG + chr6_3:1316778-1316797 None:intergenic 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG + chr6_3:1315908-1315927 None:intergenic 60.0%
! CCTCTAAGGGTGTGCCCTTG+GGG + chr6_3:1316776-1316795 None:intergenic 60.0%
! GACCTCTAAGGGTGTGCCCT+TGG + chr6_3:1316778-1316797 None:intergenic 60.0%
CTATCAACCACGCCGCCTCC+AGG - chr6_3:1315898-1315917 Msa0932900:intron 65.0%
! CCCCAAGGGCACACCCTTAG+AGG - chr6_3:1316773-1316792 Msa0932900:intron 65.0%
CTATCAACCACGCCGCCTCC+AGG - chr6_3:1315898-1315917 Msa0932900:intron 65.0%
! CCCCAAGGGCACACCCTTAG+AGG - chr6_3:1316773-1316792 Msa0932900:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 1315606 1317327 1315606 ID=Msa0932900;Name=Msa0932900
chr6_3 mRNA 1315606 1317327 1315606 ID=Msa0932900-mRNA-1;Parent=Msa0932900;Name=Msa0932900-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0|0|2|0|134
chr6_3 exon 1317234 1317327 1317234 ID=Msa0932900-mRNA-1:exon:501;Parent=Msa0932900-mRNA-1
chr6_3 exon 1315606 1315913 1315606 ID=Msa0932900-mRNA-1:exon:500;Parent=Msa0932900-mRNA-1
chr6_3 CDS 1317234 1317327 1317234 ID=Msa0932900-mRNA-1:cds;Parent=Msa0932900-mRNA-1
chr6_3 CDS 1315606 1315913 1315606 ID=Msa0932900-mRNA-1:cds;Parent=Msa0932900-mRNA-1
Gene Sequence

>Msa0932900

TTTGTGAATGGCAAATTCTGCAAGGATCCAAAGCTTGCTACAGCAAATGATTTCTTCTACTCGGTGAAAGAAGGAAATACATCAAATCCACTTGTGTTGGAGGGTACTCTTTATGTCGGGTTTGTTACTTCTAATCCAGAAAACCGTCTCATCACAAAAGTACTCAACAAAGGAGATGTTTTTGTGTTTCCAATTGGTCTCATTCACTTCCAATTGAATGTGGGGTATGGAAATGCAGTTGCCATTGCTGGACTTAGCAGCCAAAATCCAGGTGTTATTACTATTGCTAATGCTGTATTTGGGTCTAATCCTAAAATCTCTTCAGAAGTTCTCACCAAAGCTTTTCAAGTGGATAAAAATATAGTGGACAATCTTCAAAAACAATTCTGGGTGGACAACAAC

Protein sequence

>Msa0932900

FVNGKFCKDPKLATANDFFYSVKEGNTSNPLVLEGTLYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAVFGSNPKISSEVLTKAFQVDKNIVDNLQKQFWVDNN