Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715210 | XP_003611771.1 | 96.750 | 400 | 12 | 1 | 1 | 400 | 1 | 399 | 0.0 | 790 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715210 | sp|O23179|PLP1_ARATH | 56.250 | 384 | 160 | 5 | 14 | 393 | 17 | 396 | 3.14e-153 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715210 | G7K804 | 96.750 | 400 | 12 | 1 | 1 | 400 | 1 | 399 | 0.0 | 790 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011010 | Msa0715210 | 0.804648 | 1.953038e-49 | -8.615850e-47 |
| Msa0011040 | Msa0715210 | 0.809306 | 2.019821e-50 | -8.615850e-47 |
| Msa0013270 | Msa0715210 | 0.818556 | 1.843380e-52 | -8.615850e-47 |
| Msa0014590 | Msa0715210 | 0.819184 | 1.326740e-52 | -8.615850e-47 |
| Msa0024650 | Msa0715210 | 0.815904 | 7.279080e-52 | -8.615850e-47 |
| Msa0025570 | Msa0715210 | 0.849214 | 3.734021e-60 | -8.615850e-47 |
| Msa0045810 | Msa0715210 | 0.802451 | 5.575747e-49 | -8.615850e-47 |
| Msa0048380 | Msa0715210 | 0.809992 | 1.438307e-50 | -8.615850e-47 |
| Msa0051910 | Msa0715210 | 0.806479 | 8.065369e-50 | -8.615850e-47 |
| Msa0060410 | Msa0715210 | 0.801314 | 9.545136e-49 | -8.615850e-47 |
| Msa0063540 | Msa0715210 | 0.835780 | 1.374445e-56 | -8.615850e-47 |
| Msa0073110 | Msa0715210 | 0.847086 | 1.444019e-59 | -8.615850e-47 |
| Msa0095910 | Msa0715210 | 0.811548 | 6.624588e-51 | -8.615850e-47 |
| Msa0106540 | Msa0715210 | 0.823459 | 1.369244e-53 | -8.615850e-47 |
| Msa0111780 | Msa0715210 | 0.803341 | 3.651766e-49 | -8.615850e-47 |
| Msa0117650 | Msa0715210 | 0.811851 | 5.693438e-51 | -8.615850e-47 |
| Msa0604280 | Msa0715210 | 0.802849 | 4.615583e-49 | -8.615850e-47 |
| Msa0606600 | Msa0715210 | 0.801919 | 7.172305e-49 | -8.615850e-47 |
| Msa0614960 | Msa0715210 | 0.831475 | 1.634972e-55 | -8.615850e-47 |
| Msa0639400 | Msa0715210 | 0.810494 | 1.120883e-50 | -8.615850e-47 |
| Msa0639410 | Msa0715210 | 0.840338 | 9.237115e-58 | -8.615850e-47 |
| Msa0643840 | Msa0715210 | 0.806768 | 7.007564e-50 | -8.615850e-47 |
| Msa0645370 | Msa0715210 | 0.804141 | 2.490819e-49 | -8.615850e-47 |
| Msa0647300 | Msa0715210 | 0.810606 | 1.060026e-50 | -8.615850e-47 |
| Msa0652590 | Msa0715210 | 0.811493 | 6.810259e-51 | -8.615850e-47 |
| Msa0655370 | Msa0715210 | 0.811238 | 7.738020e-51 | -8.615850e-47 |
| Msa0655800 | Msa0715210 | 0.805460 | 1.320938e-49 | -8.615850e-47 |
| Msa0666950 | Msa0715210 | 0.809988 | 1.441008e-50 | -8.615850e-47 |
| Msa0671640 | Msa0715210 | 0.803110 | 4.076265e-49 | -8.615850e-47 |
| Msa0680460 | Msa0715210 | 0.807605 | 4.657448e-50 | -8.615850e-47 |
| Msa0682410 | Msa0715210 | 0.813987 | 1.937411e-51 | -8.615850e-47 |
| Msa0682420 | Msa0715210 | 0.811793 | 5.861776e-51 | -8.615850e-47 |
| Msa0685080 | Msa0715210 | 0.801484 | 8.811380e-49 | -8.615850e-47 |
| Msa0686830 | Msa0715210 | 0.814791 | 1.287049e-51 | -8.615850e-47 |
| Msa0689840 | Msa0715210 | 0.801565 | 8.481017e-49 | -8.615850e-47 |
| Msa0699170 | Msa0715210 | 0.847622 | 1.029574e-59 | -8.615850e-47 |
| Msa0707330 | Msa0715210 | 0.807932 | 3.969288e-50 | -8.615850e-47 |
| Msa0715210 | Msa0715220 | 0.812415 | 4.289425e-51 | -8.615850e-47 |
| Msa0715210 | Msa0731580 | 0.807669 | 4.514718e-50 | -8.615850e-47 |
| Msa0715210 | Msa0757120 | 0.902789 | 6.765924e-79 | -8.615850e-47 |
| Msa0715210 | Msa0789780 | 0.802869 | 4.572226e-49 | -8.615850e-47 |
| Msa0715210 | Msa0792410 | 0.805353 | 1.390740e-49 | -8.615850e-47 |
| Msa0715210 | Msa0795320 | 0.805839 | 1.099883e-49 | -8.615850e-47 |
| Msa0715210 | Msa0795910 | -0.802854 | 4.605137e-49 | -8.615850e-47 |
| Msa0715210 | Msa0798150 | 0.905820 | 2.863772e-80 | -8.615850e-47 |
| Msa0715210 | Msa0799120 | 0.804033 | 2.623121e-49 | -8.615850e-47 |
| Msa0715210 | Msa0802600 | 0.806406 | 8.352877e-50 | -8.615850e-47 |
| Msa0715210 | Msa0806930 | 0.811143 | 8.114339e-51 | -8.615850e-47 |
| Msa0715210 | Msa0809920 | 0.808663 | 2.772770e-50 | -8.615850e-47 |
| Msa0715210 | Msa0812220 | 0.810170 | 1.316864e-50 | -8.615850e-47 |
| Msa0715210 | Msa0814160 | 0.825451 | 4.653862e-54 | -8.615850e-47 |
| Msa0715210 | Msa0816140 | 0.800839 | 1.193960e-48 | -8.615850e-47 |
| Msa0715210 | Msa0829250 | -0.801883 | 7.296232e-49 | -8.615850e-47 |
| Msa0715210 | Msa0831890 | 0.814744 | 1.317823e-51 | -8.615850e-47 |
| Msa0715210 | Msa0833360 | -0.800590 | 1.342216e-48 | -8.615850e-47 |
| Msa0715210 | Msa0836240 | 0.846460 | 2.142480e-59 | -8.615850e-47 |
| Msa0715210 | Msa0861730 | 0.802874 | 4.560216e-49 | -8.615850e-47 |
| Msa0715210 | Msa0867080 | 0.816504 | 5.344086e-52 | -8.615850e-47 |
| Msa0715210 | Msa0873880 | 0.800443 | 1.437627e-48 | -8.615850e-47 |
| Msa0715210 | Msa0874750 | 0.807087 | 5.999957e-50 | -8.615850e-47 |
| Msa0715210 | Msa0880910 | 0.804563 | 2.034247e-49 | -8.615850e-47 |
| Msa0715210 | Msa0893220 | 0.815717 | 8.011103e-52 | -8.615850e-47 |
| Msa0715210 | Msa0893840 | 0.816033 | 6.811474e-52 | -8.615850e-47 |
| Msa0715210 | Msa0896920 | 0.827999 | 1.147127e-54 | -8.615850e-47 |
| Msa0715210 | Msa0898970 | 0.816610 | 5.060754e-52 | -8.615850e-47 |
| Msa0715210 | Msa0910170 | 0.812040 | 5.178472e-51 | -8.615850e-47 |
| Msa0715210 | Msa0928060 | -0.801831 | 7.478241e-49 | -8.615850e-47 |
| Msa0715210 | Msa0964400 | -0.813071 | 3.081955e-51 | -8.615850e-47 |
| Msa0715210 | Msa0964510 | 0.838992 | 2.068506e-57 | -8.615850e-47 |
| Msa0715210 | Msa0967780 | 0.800856 | 1.184263e-48 | -8.615850e-47 |
| Msa0715210 | Msa0975950 | 0.819580 | 1.077877e-52 | -8.615850e-47 |
| Msa0715210 | Msa0996990 | 0.803088 | 4.119562e-49 | -8.615850e-47 |
| Msa0715210 | Msa0998660 | -0.811230 | 7.766964e-51 | -8.615850e-47 |
| Msa0715210 | Msa1001120 | 0.829899 | 3.976633e-55 | -8.615850e-47 |
| Msa0715210 | Msa1006170 | 0.823821 | 1.126716e-53 | -8.615850e-47 |
| Msa0715210 | Msa1022490 | 0.800811 | 1.209682e-48 | -8.615850e-47 |
| Msa0715210 | Msa1022510 | 0.818394 | 2.005260e-52 | -8.615850e-47 |
| Msa0715210 | Msa1029860 | 0.827890 | 1.218715e-54 | -8.615850e-47 |
| Msa0715210 | Msa1030210 | 0.806125 | 9.572874e-50 | -8.615850e-47 |
| Msa0715210 | Msa1030320 | 0.813825 | 2.103376e-51 | -8.615850e-47 |
| Msa0715210 | Msa1035050 | 0.813770 | 2.162926e-51 | -8.615850e-47 |
| Msa0715210 | Msa1048350 | 0.801756 | 7.749526e-49 | -8.615850e-47 |
| Msa0715210 | Msa1056890 | 0.802339 | 5.881194e-49 | -8.615850e-47 |
| Msa0715210 | Msa1064940 | 0.812066 | 5.110936e-51 | -8.615850e-47 |
| Msa0715210 | Msa1068780 | 0.825692 | 4.081358e-54 | -8.615850e-47 |
| Msa0715210 | Msa1069350 | 0.817159 | 3.811017e-52 | -8.615850e-47 |
| Msa0715210 | Msa1075090 | 0.819344 | 1.219939e-52 | -8.615850e-47 |
| Msa0715210 | Msa1078120 | -0.808549 | 2.932480e-50 | -8.615850e-47 |
| Msa0715210 | Msa1100330 | 0.804938 | 1.698649e-49 | -8.615850e-47 |
| Msa0715210 | Msa1103450 | 0.813658 | 2.290208e-51 | -8.615850e-47 |
| Msa0715210 | Msa1106680 | 0.831591 | 1.530640e-55 | -8.615850e-47 |
| Msa0715210 | Msa1108560 | 0.837829 | 4.126855e-57 | -8.615850e-47 |
| Msa0715210 | Msa1115980 | 0.835885 | 1.292990e-56 | -8.615850e-47 |
| Msa0715210 | Msa1120960 | 0.810175 | 1.313316e-50 | -8.615850e-47 |
| Msa0715210 | Msa1132880 | -0.803463 | 3.444918e-49 | -8.615850e-47 |
| Msa0715210 | Msa1136630 | 0.800108 | 1.682341e-48 | -8.615850e-47 |
| Msa0715210 | Msa1142390 | 0.801883 | 7.296874e-49 | -8.615850e-47 |
| Msa0715210 | Msa1147010 | 0.806107 | 9.658739e-50 | -8.615850e-47 |
| Msa0715210 | Msa1156240 | 0.803207 | 3.892342e-49 | -8.615850e-47 |
| Msa0715210 | Msa1156740 | 0.819286 | 1.257918e-52 | -8.615850e-47 |
| Msa0715210 | Msa1157210 | 0.814522 | 1.476358e-51 | -8.615850e-47 |
| Msa0715210 | Msa1162430 | 0.827427 | 1.574120e-54 | -8.615850e-47 |
| Msa0715210 | Msa1170340 | 0.820592 | 6.323720e-53 | -8.615850e-47 |
| Msa0715210 | Msa1174280 | 0.810642 | 1.041570e-50 | -8.615850e-47 |
| Msa0715210 | Msa1181090 | 0.838775 | 2.353812e-57 | -8.615850e-47 |
| Msa0715210 | Msa1186430 | 0.820776 | 5.734932e-53 | -8.615850e-47 |
| Msa0715210 | Msa1188080 | 0.800055 | 1.724852e-48 | -8.615850e-47 |
| Msa0715210 | Msa1191530 | -0.813782 | 2.150509e-51 | -8.615850e-47 |
| Msa0715210 | Msa1202110 | 0.804674 | 1.928374e-49 | -8.615850e-47 |
| Msa0715210 | Msa1208140 | 0.806842 | 6.759681e-50 | -8.615850e-47 |
| Msa0715210 | Msa1211610 | 0.804464 | 2.133653e-49 | -8.615850e-47 |
| Msa0715210 | Msa1223960 | 0.804846 | 1.775496e-49 | -8.615850e-47 |
| Msa0715210 | Msa1223990 | 0.824837 | 6.500250e-54 | -8.615850e-47 |
| Msa0715210 | Msa1239050 | 0.821207 | 4.563847e-53 | -8.615850e-47 |
| Msa0715210 | Msa1240710 | 0.815996 | 6.941450e-52 | -8.615850e-47 |
| Msa0715210 | Msa1250280 | 0.802452 | 5.573208e-49 | -8.615850e-47 |
| Msa0715210 | Msa1254870 | 0.806210 | 9.186480e-50 | -8.615850e-47 |
| Msa0715210 | Msa1263110 | 0.818916 | 1.527066e-52 | -8.615850e-47 |
| Msa0715210 | Msa1263120 | 0.808803 | 2.588756e-50 | -8.615850e-47 |
| Msa0715210 | Msa1296490 | 0.806120 | 9.598307e-50 | -8.615850e-47 |
| Msa0715210 | Msa1319760 | 0.842425 | 2.606442e-58 | -8.615850e-47 |
| Msa0715210 | Msa1320160 | 0.809595 | 1.750450e-50 | -8.615850e-47 |
| Msa0715210 | Msa1322500 | 0.841228 | 5.396529e-58 | -8.615850e-47 |
| Msa0715210 | Msa1328430 | 0.806174 | 9.348739e-50 | -8.615850e-47 |
| Msa0715210 | Msa1341710 | -0.801832 | 7.476401e-49 | -8.615850e-47 |
| Msa0715210 | Msa1342360 | -0.802788 | 4.750985e-49 | -8.615850e-47 |
| Msa0715210 | Msa1357840 | 0.808771 | 2.629663e-50 | -8.615850e-47 |
| Msa0715210 | Msa1361980 | 0.815199 | 1.044972e-51 | -8.615850e-47 |
| Msa0715210 | Msa1366480 | 0.809770 | 1.605551e-50 | -8.615850e-47 |
| Msa0715210 | Msa1405830 | 0.822178 | 2.722266e-53 | -8.615850e-47 |
| Msa0715210 | Msa1408230 | -0.801757 | 7.745553e-49 | -8.615850e-47 |
| Msa0715210 | Msa1446090 | 0.801963 | 7.025437e-49 | -8.615850e-47 |
| Msa0715210 | Msa1455360 | 0.811598 | 6.461024e-51 | -8.615850e-47 |
| Msa0715210 | Msa1459920 | 0.811772 | 5.924452e-51 | -8.615850e-47 |
| Msa0715210 | Msa1462610 | 0.806660 | 7.385532e-50 | -8.615850e-47 |
| Msa0121320 | Msa0715210 | 0.817595 | 3.039910e-52 | -8.615850e-47 |
| Msa0142560 | Msa0715210 | 0.808950 | 2.407381e-50 | -8.615850e-47 |
| Msa0143640 | Msa0715210 | 0.802022 | 6.831403e-49 | -8.615850e-47 |
| Msa0150000 | Msa0715210 | 0.808408 | 3.142979e-50 | -8.615850e-47 |
| Msa0150920 | Msa0715210 | 0.803196 | 3.912943e-49 | -8.615850e-47 |
| Msa0154460 | Msa0715210 | 0.811811 | 5.806910e-51 | -8.615850e-47 |
| Msa0163690 | Msa0715210 | 0.803530 | 3.336976e-49 | -8.615850e-47 |
| Msa0166180 | Msa0715210 | 0.821231 | 4.506444e-53 | -8.615850e-47 |
| Msa0185040 | Msa0715210 | 0.804987 | 1.658778e-49 | -8.615850e-47 |
| Msa0186240 | Msa0715210 | 0.809377 | 1.950340e-50 | -8.615850e-47 |
| Msa0193680 | Msa0715210 | 0.800942 | 1.137245e-48 | -8.615850e-47 |
| Msa0364910 | Msa0715210 | -0.800164 | 1.638913e-48 | -8.615850e-47 |
| Msa0366510 | Msa0715210 | 0.812119 | 4.977312e-51 | -8.615850e-47 |
| Msa0369990 | Msa0715210 | 0.812603 | 3.901131e-51 | -8.615850e-47 |
| Msa0370620 | Msa0715210 | 0.806041 | 9.972237e-50 | -8.615850e-47 |
| Msa0374040 | Msa0715210 | 0.817748 | 2.807949e-52 | -8.615850e-47 |
| Msa0390160 | Msa0715210 | 0.801768 | 7.705028e-49 | -8.615850e-47 |
| Msa0403740 | Msa0715210 | -0.803309 | 3.707577e-49 | -8.615850e-47 |
| Msa0405210 | Msa0715210 | 0.809553 | 1.787704e-50 | -8.615850e-47 |
| Msa0412580 | Msa0715210 | -0.811999 | 5.286919e-51 | -8.615850e-47 |
| Msa0414480 | Msa0715210 | 0.811771 | 5.926196e-51 | -8.615850e-47 |
| Msa0418160 | Msa0715210 | 0.816816 | 4.550125e-52 | -8.615850e-47 |
| Msa0419570 | Msa0715210 | 0.800843 | 1.191855e-48 | -8.615850e-47 |
| Msa0420890 | Msa0715210 | 0.804624 | 1.975582e-49 | -8.615850e-47 |
| Msa0423220 | Msa0715210 | 0.803641 | 3.163967e-49 | -8.615850e-47 |
| Msa0428720 | Msa0715210 | -0.801819 | 7.522712e-49 | -8.615850e-47 |
| Msa0438520 | Msa0715210 | 0.802235 | 6.177726e-49 | -8.615850e-47 |
| Msa0444250 | Msa0715210 | 0.812076 | 5.085958e-51 | -8.615850e-47 |
| Msa0454770 | Msa0715210 | 0.836775 | 7.678861e-57 | -8.615850e-47 |
| Msa0456450 | Msa0715210 | -0.802573 | 5.262432e-49 | -8.615850e-47 |
| Msa0457070 | Msa0715210 | -0.822571 | 2.206078e-53 | -8.615850e-47 |
| Msa0464310 | Msa0715210 | 0.811748 | 5.993250e-51 | -8.615850e-47 |
| Msa0478080 | Msa0715210 | 0.811056 | 8.474413e-51 | -8.615850e-47 |
| Msa0242830 | Msa0715210 | 0.805248 | 1.462966e-49 | -8.615850e-47 |
| Msa0257760 | Msa0715210 | 0.835171 | 1.960316e-56 | -8.615850e-47 |
| Msa0265650 | Msa0715210 | 0.800811 | 1.209823e-48 | -8.615850e-47 |
| Msa0269710 | Msa0715210 | 0.801209 | 1.003227e-48 | -8.615850e-47 |
| Msa0275730 | Msa0715210 | 0.802318 | 5.937709e-49 | -8.615850e-47 |
| Msa0278460 | Msa0715210 | 0.817687 | 2.897282e-52 | -8.615850e-47 |
| Msa0281190 | Msa0715210 | 0.812793 | 3.546201e-51 | -8.615850e-47 |
| Msa0287630 | Msa0715210 | 0.815706 | 8.058363e-52 | -8.615850e-47 |
| Msa0303900 | Msa0715210 | 0.803081 | 4.133571e-49 | -8.615850e-47 |
| Msa0307630 | Msa0715210 | 0.809074 | 2.264465e-50 | -8.615850e-47 |
| Msa0328090 | Msa0715210 | 0.825539 | 4.436326e-54 | -8.615850e-47 |
| Msa0331070 | Msa0715210 | -0.805742 | 1.152298e-49 | -8.615850e-47 |
| Msa0333770 | Msa0715210 | 0.814235 | 1.708350e-51 | -8.615850e-47 |
| Msa0335340 | Msa0715210 | 0.802496 | 5.458293e-49 | -8.615850e-47 |
| Msa0346170 | Msa0715210 | 0.811613 | 6.413015e-51 | -8.615850e-47 |
| Msa0353010 | Msa0715210 | 0.800281 | 1.551021e-48 | -8.615850e-47 |
| Msa0364030 | Msa0715210 | -0.803418 | 3.520185e-49 | -8.615850e-47 |
| Msa0488620 | Msa0715210 | 0.812889 | 3.377650e-51 | -8.615850e-47 |
| Msa0490060 | Msa0715210 | 0.805227 | 1.478047e-49 | -8.615850e-47 |
| Msa0491830 | Msa0715210 | 0.803723 | 3.042788e-49 | -8.615850e-47 |
| Msa0493870 | Msa0715210 | 0.802785 | 4.757679e-49 | -8.615850e-47 |
| Msa0510870 | Msa0715210 | 0.818389 | 2.010958e-52 | -8.615850e-47 |
| Msa0522140 | Msa0715210 | 0.806207 | 9.200546e-50 | -8.615850e-47 |
| Msa0522170 | Msa0715210 | 0.810203 | 1.295215e-50 | -8.615850e-47 |
| Msa0535570 | Msa0715210 | 0.813151 | 2.958680e-51 | -8.615850e-47 |
| Msa0538440 | Msa0715210 | 0.818631 | 1.772372e-52 | -8.615850e-47 |
| Msa0538520 | Msa0715210 | 0.802776 | 4.778019e-49 | -8.615850e-47 |
| Msa0538530 | Msa0715210 | 0.804964 | 1.677502e-49 | -8.615850e-47 |
| Msa0546760 | Msa0715210 | 0.803886 | 2.814480e-49 | -8.615850e-47 |
| Msa0548790 | Msa0715210 | 0.801922 | 7.164008e-49 | -8.615850e-47 |
| Msa0549170 | Msa0715210 | 0.818217 | 2.199111e-52 | -8.615850e-47 |
| Msa0554660 | Msa0715210 | 0.824920 | 6.213310e-54 | -8.615850e-47 |
| Msa0557240 | Msa0715210 | 0.801785 | 7.642140e-49 | -8.615850e-47 |
| Msa0557250 | Msa0715210 | 0.803575 | 3.265991e-49 | -8.615850e-47 |
| Msa0561830 | Msa0715210 | 0.810316 | 1.224755e-50 | -8.615850e-47 |
| Msa0580410 | Msa0715210 | -0.803353 | 3.629773e-49 | -8.615850e-47 |
| Msa0580890 | Msa0715210 | -0.803539 | 3.322270e-49 | -8.615850e-47 |
| Msa0591490 | Msa0715210 | 0.814194 | 1.743956e-51 | -8.615850e-47 |
| Msa0597370 | Msa0715210 | -0.802998 | 4.298927e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715210 | MtrunA17_Chr5g0402441 | 96.750 | 400 | 12 | 1 | 1 | 400 | 1 | 399 | 0.0 | 790 |
| Msa0715210 | MtrunA17_Chr5g0402451 | 87.817 | 394 | 44 | 3 | 10 | 400 | 4 | 396 | 0.0 | 695 |
| Msa0715210 | MtrunA17_Chr1g0153781 | 57.294 | 377 | 155 | 4 | 14 | 386 | 19 | 393 | 1.93e-153 | 439 |
| Msa0715210 | MtrunA17_Chr3g0133691 | 53.941 | 406 | 176 | 6 | 3 | 400 | 4 | 406 | 8.81e-141 | 407 |
| Msa0715210 | MtrunA17_Chr3g0133681 | 53.401 | 397 | 176 | 5 | 3 | 393 | 4 | 397 | 4.36e-139 | 403 |
| Msa0715210 | MtrunA17_Chr8g0335651 | 43.377 | 385 | 187 | 9 | 14 | 397 | 31 | 385 | 6.87e-84 | 261 |
| Msa0715210 | MtrunA17_Chr8g0335581 | 38.619 | 391 | 212 | 11 | 14 | 397 | 19 | 388 | 5.22e-79 | 249 |
| Msa0715210 | MtrunA17_Chr8g0335611 | 38.520 | 392 | 207 | 12 | 16 | 397 | 32 | 399 | 1.12e-77 | 246 |
| Msa0715210 | MtrunA17_Chr8g0335621 | 38.265 | 392 | 208 | 12 | 16 | 397 | 63 | 430 | 9.89e-77 | 244 |
| Msa0715210 | MtrunA17_Chr8g0335591 | 38.958 | 403 | 207 | 13 | 4 | 397 | 25 | 397 | 1.28e-74 | 238 |
| Msa0715210 | MtrunA17_Chr8g0335631 | 39.642 | 391 | 204 | 10 | 14 | 397 | 30 | 395 | 3.57e-70 | 226 |
| Msa0715210 | MtrunA17_Chr1g0199801 | 29.282 | 362 | 207 | 14 | 16 | 354 | 75 | 410 | 4.30e-34 | 132 |
| Msa0715210 | MtrunA17_Chr1g0185551 | 26.901 | 342 | 209 | 13 | 18 | 351 | 32 | 340 | 8.88e-27 | 110 |
| Msa0715210 | MtrunA17_Chr2g0292051 | 29.683 | 347 | 188 | 15 | 16 | 354 | 69 | 367 | 9.38e-24 | 102 |
| Msa0715210 | MtrunA17_Chr7g0259871 | 24.928 | 345 | 220 | 10 | 18 | 353 | 32 | 346 | 2.76e-22 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715210 | AT4G37070.2 | 56.250 | 384 | 160 | 5 | 14 | 393 | 17 | 396 | 3.19e-154 | 442 |
| Msa0715210 | AT4G37060.1 | 55.844 | 385 | 162 | 5 | 15 | 395 | 18 | 398 | 3.63e-151 | 434 |
| Msa0715210 | AT4G37070.3 | 56.873 | 371 | 152 | 5 | 14 | 380 | 17 | 383 | 3.34e-150 | 430 |
| Msa0715210 | AT4G37070.1 | 56.873 | 371 | 152 | 5 | 14 | 380 | 17 | 383 | 3.34e-150 | 430 |
| Msa0715210 | AT2G26560.1 | 57.143 | 385 | 151 | 7 | 14 | 393 | 17 | 392 | 4.60e-147 | 423 |
| Msa0715210 | AT4G37060.2 | 51.683 | 416 | 162 | 6 | 15 | 395 | 18 | 429 | 2.01e-144 | 418 |
| Msa0715210 | AT4G37050.1 | 54.447 | 371 | 157 | 5 | 35 | 395 | 54 | 422 | 3.76e-140 | 406 |
| Msa0715210 | AT4G37070.4 | 54.447 | 371 | 150 | 6 | 14 | 380 | 17 | 372 | 4.20e-140 | 404 |
| Msa0715210 | AT5G43590.1 | 52.618 | 382 | 168 | 6 | 14 | 390 | 12 | 385 | 1.43e-116 | 345 |
| Msa0715210 | AT5G43590.2 | 52.618 | 382 | 168 | 6 | 14 | 390 | 79 | 452 | 9.85e-116 | 345 |
| Msa0715210 | AT3G54950.1 | 30.259 | 347 | 210 | 9 | 16 | 354 | 98 | 420 | 7.54e-37 | 140 |
| Msa0715210 | AT2G39220.1 | 30.725 | 345 | 214 | 10 | 16 | 354 | 108 | 433 | 6.83e-36 | 137 |
| Msa0715210 | AT4G29800.1 | 29.189 | 370 | 223 | 12 | 2 | 353 | 108 | 456 | 8.52e-30 | 120 |
| Msa0715210 | AT4G29800.2 | 29.380 | 371 | 222 | 13 | 2 | 353 | 108 | 457 | 1.04e-29 | 120 |
| Msa0715210 | AT3G63200.1 | 26.115 | 314 | 200 | 10 | 18 | 325 | 32 | 319 | 2.81e-26 | 109 |
Find 76 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCAATGGTGCCCTTATC+TGG | 0.232624 | 5_1:+8142854 | None:intergenic |
| ATGCTAAGATGGTTGCTAAA+TGG | 0.247274 | 5_1:-8143547 | Msa0715210:CDS |
| ATAACTGTTCTTAGCATTGA+TGG | 0.333881 | 5_1:-8145066 | Msa0715210:CDS |
| GGGAGAAGTGGGAATGGTAT+AGG | 0.351084 | 5_1:-8143632 | Msa0715210:CDS |
| ATTTCCTTGGCAGCAAATAA+AGG | 0.355627 | 5_1:+8144731 | None:intergenic |
| TAAAACAAATTTGAATAATC+TGG | 0.359589 | 5_1:-8142951 | Msa0715210:CDS |
| AATAAAGGACGGTTATCCTT+TGG | 0.370442 | 5_1:+8144746 | None:intergenic |
| CTACCTTGAATCACAACTTC+AGG | 0.374157 | 5_1:-8145004 | Msa0715210:intron |
| TGCTAAGATGGTTGCTAAAT+GGG | 0.379655 | 5_1:-8143546 | Msa0715210:CDS |
| CAATGAAGCTAGCACTGATA+TGG | 0.386604 | 5_1:-8143471 | Msa0715210:CDS |
| CAATCCTTGCATCCTCATTA+TGG | 0.389232 | 5_1:+8144840 | None:intergenic |
| TAGGTTTGCTAGGTTACTTT+CGG | 0.404999 | 5_1:-8142721 | Msa0715210:CDS |
| GATATATTTGTAGGTTTGCT+AGG | 0.409850 | 5_1:-8142731 | Msa0715210:intron |
| GGAGAAGTGGGAATGGTATA+GGG | 0.414361 | 5_1:-8143631 | Msa0715210:CDS |
| TAACCTGAAGTTGTGATTCA+AGG | 0.425350 | 5_1:+8145001 | None:intergenic |
| AGGACGGTTATCCTTTGGAT+TGG | 0.427991 | 5_1:+8144751 | None:intergenic |
| CTAAATGGGGTGCTTTGACT+TGG | 0.433220 | 5_1:-8143532 | Msa0715210:CDS |
| TTGACTTGGTTATTCAACTC+TGG | 0.437374 | 5_1:-8143518 | Msa0715210:CDS |
| TATGAAACTGTTCCAGATAA+GGG | 0.437927 | 5_1:-8142866 | Msa0715210:CDS |
| GGCGTCAGAGGAATCATTCC+TGG | 0.439433 | 5_1:-8145039 | Msa0715210:CDS |
| CCCAAGCCTTATCATATCCT+TGG | 0.439573 | 5_1:+8143652 | None:intergenic |
| TCATTGAAACAATCTAGAAT+TGG | 0.440126 | 5_1:+8143488 | None:intergenic |
| ACTCGAGTGAATCTAGATAC+TGG | 0.442727 | 5_1:-8142893 | Msa0715210:CDS |
| GGACGGTTATCCTTTGGATT+GGG | 0.448475 | 5_1:+8144752 | None:intergenic |
| CCGTCCTTTATTTGCTGCCA+AGG | 0.456116 | 5_1:-8144735 | Msa0715210:CDS |
| ACCAAGGATATGATAAGGCT+TGG | 0.457168 | 5_1:-8143653 | Msa0715210:CDS |
| ATAATCAATATATACCTGAT+AGG | 0.458691 | 5_1:+8144296 | None:intergenic |
| TGATAAGGCTTGGGAGAAGT+GGG | 0.472469 | 5_1:-8143643 | Msa0715210:CDS |
| ATATGAAACTGTTCCAGATA+AGG | 0.477514 | 5_1:-8142867 | Msa0715210:CDS |
| GTAAAATGGGACAATTTCCT+TGG | 0.485032 | 5_1:+8144718 | None:intergenic |
| ATGATAAGGCTTGGGAGAAG+TGG | 0.485821 | 5_1:-8143644 | Msa0715210:CDS |
| TTGAATAATCTGGTAAAAGC+TGG | 0.487021 | 5_1:-8142941 | Msa0715210:CDS |
| ATAGTTATCTCAATAGGGAC+AGG | 0.489956 | 5_1:-8143596 | Msa0715210:CDS |
| GTAATTGCTGGGACAAGTAC+AGG | 0.493434 | 5_1:-8144803 | Msa0715210:CDS |
| AACATAACAAAAGCTTTGAC+AGG | 0.502042 | 5_1:-8144453 | Msa0715210:CDS |
| AGAACAGTTATGAAATTCAC+AGG | 0.513678 | 5_1:+8145078 | None:intergenic |
| TAGTGGGCTGGTAAATAAGT+TGG | 0.515590 | 5_1:+8144130 | None:intergenic |
| AATTCACAGGCTTAATATCA+AGG | 0.515925 | 5_1:+8145091 | None:intergenic |
| GCAAAAGTACAATGCTAAGA+TGG | 0.517286 | 5_1:-8143558 | Msa0715210:CDS |
| CCAAGGATATGATAAGGCTT+GGG | 0.527337 | 5_1:-8143652 | Msa0715210:CDS |
| CTTAATATCAAGGTAAGATG+TGG | 0.538960 | 5_1:+8145101 | None:intergenic |
| AAGTGACCAAGGATATGATA+AGG | 0.539485 | 5_1:-8143658 | Msa0715210:CDS |
| GCTAGTGGTACATCTAAAGT+TGG | 0.541491 | 5_1:+8144181 | None:intergenic |
| CCATTGAGGAAGAACTCAAA+AGG | 0.542620 | 5_1:-8142841 | Msa0715210:intron |
| TTAATATCAAGGTAAGATGT+GGG | 0.542845 | 5_1:+8145102 | None:intergenic |
| ACAAGGGGAATTAGCTTCTG+TGG | 0.558148 | 5_1:-8142984 | Msa0715210:CDS |
| AGGCTTGGGAGAAGTGGGAA+TGG | 0.568362 | 5_1:-8143638 | Msa0715210:CDS |
| AGATTCTGAACATCAAAAGA+TGG | 0.568517 | 5_1:+8144339 | None:intergenic |
| TGGATTGGGAGTTGCTAACA+TGG | 0.571178 | 5_1:+8144766 | None:intergenic |
| AAACAGGACGATACATTACA+AGG | 0.573204 | 5_1:-8143001 | Msa0715210:intron |
| TGGCGTGTGTGCTAACAATC+CGG | 0.575021 | 5_1:-8144050 | Msa0715210:intron |
| AGATATTTGCATAGCTACAT+CGG | 0.575630 | 5_1:-8144158 | Msa0715210:CDS |
| GTTCTTAGCATTGATGGTGG+AGG | 0.576709 | 5_1:-8145060 | Msa0715210:CDS |
| ATTGATGGTGGAGGCGTCAG+AGG | 0.577961 | 5_1:-8145051 | Msa0715210:CDS |
| GGTAGTTGTCTTGAGACTGA+AGG | 0.579464 | 5_1:+8143417 | None:intergenic |
| AAAGAATACAATCTCATCGA+TGG | 0.580009 | 5_1:-8144073 | Msa0715210:CDS |
| GTAGTTGTCTTGAGACTGAA+GGG | 0.588919 | 5_1:+8143418 | None:intergenic |
| TCCAGATAAGGGCACCATTG+AGG | 0.588948 | 5_1:-8142855 | Msa0715210:CDS |
| CTGAAGTTGTGATTCAAGGT+AGG | 0.589950 | 5_1:+8145005 | None:intergenic |
| CCTTGGCAGCAAATAAAGGA+CGG | 0.594651 | 5_1:+8144735 | None:intergenic |
| TAGACCATAATGAGGATGCA+AGG | 0.606947 | 5_1:-8144844 | Msa0715210:CDS |
| AATATCAAGGTAAGATGTGG+GGG | 0.610994 | 5_1:+8145104 | None:intergenic |
| AACAGGACGATACATTACAA+GGG | 0.619419 | 5_1:-8143000 | Msa0715210:intron |
| ACTGTTCTTAGCATTGATGG+TGG | 0.620516 | 5_1:-8145063 | Msa0715210:CDS |
| TAATATCAAGGTAAGATGTG+GGG | 0.627540 | 5_1:+8145103 | None:intergenic |
| GTATAATTACTTGAATTCTG+AGG | 0.630760 | 5_1:+8143396 | None:intergenic |
| GAATACAATCTCATCGATGG+TGG | 0.637571 | 5_1:-8144070 | Msa0715210:CDS |
| TTGACAGGAGCTAAGTACAA+TGG | 0.638823 | 5_1:-8144438 | Msa0715210:CDS |
| TGCAATTAGAGAAGTGACCA+AGG | 0.640808 | 5_1:-8143669 | Msa0715210:CDS |
| GCTATGCAAATATCTGCTAG+TGG | 0.642842 | 5_1:+8144166 | None:intergenic |
| ACAGGAGATAGACCATAATG+AGG | 0.647951 | 5_1:-8144852 | Msa0715210:intron |
| GTTAGCAACTCCCAATCCAA+AGG | 0.650775 | 5_1:-8144762 | Msa0715210:CDS |
| ACAGGACGATACATTACAAG+GGG | 0.650922 | 5_1:-8142999 | Msa0715210:intron |
| AGGTAGGCAAGAATAACACC+AGG | 0.666909 | 5_1:+8145021 | None:intergenic |
| GCTAAGATGGTTGCTAAATG+GGG | 0.667354 | 5_1:-8143545 | Msa0715210:CDS |
| ATTGCTGGGACAAGTACAGG+CGG | 0.738099 | 5_1:-8144800 | Msa0715210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTATTAAAATAAAA+TGG | - | chr5_1:8144427-8144446 | Msa0715210:CDS | 0.0% |
| !! | TATGTTAATTAATAATTTAC+AGG | - | chr5_1:8142918-8142937 | Msa0715210:CDS | 10.0% |
| !!! | TAGAAATTTTAATATATAGA+TGG | + | chr5_1:8143133-8143152 | None:intergenic | 10.0% |
| !! | TAGATTTCAAATATTATAAT+TGG | + | chr5_1:8144060-8144079 | None:intergenic | 10.0% |
| !! | AAAAATATTGATATATTTGT+AGG | - | chr5_1:8145048-8145067 | Msa0715210:CDS | 10.0% |
| !! | GATTAAAAGAACTAATTAAT+TGG | - | chr5_1:8143269-8143288 | Msa0715210:intron | 15.0% |
| !! | TAATAAAAAAATAGCATAAG+AGG | + | chr5_1:8144419-8144438 | None:intergenic | 15.0% |
| !! | AAATTGAACTATTCATAAAA+CGG | - | chr5_1:8144651-8144670 | Msa0715210:intron | 15.0% |
| !! | TAAAACAAATTTGAATAATC+TGG | - | chr5_1:8144837-8144856 | Msa0715210:CDS | 15.0% |
| !!! | TATCAATATTTTTAGAGTTA+AGG | + | chr5_1:8145041-8145060 | None:intergenic | 15.0% |
| !!! | ATTATTTTGATGTAATTGCT+GGG | - | chr5_1:8142974-8142993 | Msa0715210:CDS | 20.0% |
| !! | ATAATCAATATATACCTGAT+AGG | + | chr5_1:8143495-8143514 | None:intergenic | 20.0% |
| !! | AAATATATGATCAAAGTTCA+AGG | + | chr5_1:8143569-8143588 | None:intergenic | 20.0% |
| !!! | TTACTTTACGAACTTAATTT+TGG | - | chr5_1:8143848-8143867 | Msa0715210:intron | 20.0% |
| !! | ACGATTTGATATGAAATTAA+TGG | - | chr5_1:8143988-8144007 | Msa0715210:intron | 20.0% |
| !!! | GTTTTATAGTTATCTCAATA+GGG | - | chr5_1:8144187-8144206 | Msa0715210:CDS | 20.0% |
| !!! | GTTTTTTCAAATGACATATA+TGG | - | chr5_1:8144449-8144468 | Msa0715210:CDS | 20.0% |
| !! | AAAAAATAATTCATCAAGCT+AGG | + | chr5_1:8144569-8144588 | None:intergenic | 20.0% |
| !! | TAAATTGTTACAAACTTATG+TGG | - | chr5_1:8144757-8144776 | Msa0715210:CDS | 20.0% |
| ! | TTAATATCAAGGTAAGATGT+GGG | + | chr5_1:8142689-8142708 | None:intergenic | 25.0% |
| !!! | GATTATTTTGATGTAATTGC+TGG | - | chr5_1:8142973-8142992 | Msa0715210:CDS | 25.0% |
| !!! | CTTTTTTGTGGAAAAATAGA+TGG | + | chr5_1:8143108-8143127 | None:intergenic | 25.0% |
| !!! | CATCTATTTTTCCACAAAAA+AGG | - | chr5_1:8143106-8143125 | Msa0715210:intron | 25.0% |
| ! | TTATTACTTAACATATGCAG+TGG | - | chr5_1:8143293-8143312 | Msa0715210:intron | 25.0% |
| !!! | GCTTTTGTTATGTTTATCAA+CGG | + | chr5_1:8143329-8143348 | None:intergenic | 25.0% |
| !!! | ATCTTTTTTCTCGAAATAGT+GGG | + | chr5_1:8143677-8143696 | None:intergenic | 25.0% |
| ! | TTCGAGAAAAAAGATGAAAA+TGG | - | chr5_1:8143682-8143701 | Msa0715210:intron | 25.0% |
| ! | TCGAGAAAAAAGATGAAAAT+GGG | - | chr5_1:8143683-8143702 | Msa0715210:intron | 25.0% |
| !! | CGTTTTATAGTTATCTCAAT+AGG | - | chr5_1:8144186-8144205 | Msa0715210:CDS | 25.0% |
| !! | TCATTGAAACAATCTAGAAT+TGG | + | chr5_1:8144303-8144322 | None:intergenic | 25.0% |
| ! | GTATAATTACTTGAATTCTG+AGG | + | chr5_1:8144395-8144414 | None:intergenic | 25.0% |
| TAATATCAAGGTAAGATGTG+GGG | + | chr5_1:8142688-8142707 | None:intergenic | 30.0% | |
| CTTAATATCAAGGTAAGATG+TGG | + | chr5_1:8142690-8142709 | None:intergenic | 30.0% | |
| AATTCACAGGCTTAATATCA+AGG | + | chr5_1:8142700-8142719 | None:intergenic | 30.0% | |
| AGAACAGTTATGAAATTCAC+AGG | + | chr5_1:8142713-8142732 | None:intergenic | 30.0% | |
| ! | ATAACTGTTCTTAGCATTGA+TGG | - | chr5_1:8142722-8142741 | Msa0715210:intron | 30.0% |
| !!! | GCAAGTTTTGAAGGTAAAAT+GGG | + | chr5_1:8143086-8143105 | None:intergenic | 30.0% |
| !! | AAATAGATGGCAAGTTTTGA+AGG | + | chr5_1:8143095-8143114 | None:intergenic | 30.0% |
| !!! | ATATAGATGGACCTTTTTTG+TGG | + | chr5_1:8143120-8143139 | None:intergenic | 30.0% |
| ! | AACATAACAAAAGCTTTGAC+AGG | - | chr5_1:8143335-8143354 | Msa0715210:intron | 30.0% |
| AGATTCTGAACATCAAAAGA+TGG | + | chr5_1:8143452-8143471 | None:intergenic | 30.0% | |
| TGATAGGAAGAAAAAATGGT+AGG | + | chr5_1:8143479-8143498 | None:intergenic | 30.0% | |
| !!! | TACCATTTTTTCTTCCTATC+AGG | - | chr5_1:8143478-8143497 | Msa0715210:CDS | 30.0% |
| TACCTGATAGGAAGAAAAAA+TGG | + | chr5_1:8143483-8143502 | None:intergenic | 30.0% | |
| AGATATTTGCATAGCTACAT+CGG | - | chr5_1:8143630-8143649 | Msa0715210:CDS | 30.0% | |
| !!! | CATCTTTTTTCTCGAAATAG+TGG | + | chr5_1:8143678-8143697 | None:intergenic | 30.0% |
| AAAGAATACAATCTCATCGA+TGG | - | chr5_1:8143715-8143734 | Msa0715210:intron | 30.0% | |
| TTCTAATATACTTTGCCCTT+GGG | + | chr5_1:8143774-8143793 | None:intergenic | 30.0% | |
| TTTCTAATATACTTTGCCCT+TGG | + | chr5_1:8143775-8143794 | None:intergenic | 30.0% | |
| !! | GATGATTATTTTGCAGACAA+TGG | - | chr5_1:8144095-8144114 | Msa0715210:CDS | 30.0% |
| ATAATGATTGCATAAGTGTG+CGG | - | chr5_1:8144537-8144556 | Msa0715210:intron | 30.0% | |
| TTGAATAATCTGGTAAAAGC+TGG | - | chr5_1:8144847-8144866 | Msa0715210:CDS | 30.0% | |
| ATATGAAACTGTTCCAGATA+AGG | - | chr5_1:8144921-8144940 | Msa0715210:intron | 30.0% | |
| TATGAAACTGTTCCAGATAA+GGG | - | chr5_1:8144922-8144941 | Msa0715210:intron | 30.0% | |
| TTGCATATTAGTCCTAACTA+AGG | - | chr5_1:8145012-8145031 | Msa0715210:CDS | 30.0% | |
| TGCATATTAGTCCTAACTAA+GGG | - | chr5_1:8145013-8145032 | Msa0715210:CDS | 30.0% | |
| ! | GATATATTTGTAGGTTTGCT+AGG | - | chr5_1:8145057-8145076 | Msa0715210:CDS | 30.0% |
| AAAAAGTCCAAGCTACAAAA+TGG | - | chr5_1:8145104-8145123 | Msa0715210:CDS | 30.0% | |
| ! | TTACTTTCCATTTTGTAGCT+TGG | + | chr5_1:8145114-8145133 | None:intergenic | 30.0% |
| AATATCAAGGTAAGATGTGG+GGG | + | chr5_1:8142687-8142706 | None:intergenic | 35.0% | |
| TAACCTGAAGTTGTGATTCA+AGG | + | chr5_1:8142790-8142809 | None:intergenic | 35.0% | |
| AATAAAGGACGGTTATCCTT+TGG | + | chr5_1:8143045-8143064 | None:intergenic | 35.0% | |
| ATTTCCTTGGCAGCAAATAA+AGG | + | chr5_1:8143060-8143079 | None:intergenic | 35.0% | |
| GTAAAATGGGACAATTTCCT+TGG | + | chr5_1:8143073-8143092 | None:intergenic | 35.0% | |
| !!! | GGCAAGTTTTGAAGGTAAAA+TGG | + | chr5_1:8143087-8143106 | None:intergenic | 35.0% |
| TCTAATATACTTTGCCCTTG+GGG | + | chr5_1:8143773-8143792 | None:intergenic | 35.0% | |
| AAGTGACCAAGGATATGATA+AGG | - | chr5_1:8144130-8144149 | Msa0715210:CDS | 35.0% | |
| ATAGTTATCTCAATAGGGAC+AGG | - | chr5_1:8144192-8144211 | Msa0715210:CDS | 35.0% | |
| ! | GCAAAAGTACAATGCTAAGA+TGG | - | chr5_1:8144230-8144249 | Msa0715210:intron | 35.0% |
| ATGCTAAGATGGTTGCTAAA+TGG | - | chr5_1:8144241-8144260 | Msa0715210:intron | 35.0% | |
| TGCTAAGATGGTTGCTAAAT+GGG | - | chr5_1:8144242-8144261 | Msa0715210:intron | 35.0% | |
| !! | TTGACTTGGTTATTCAACTC+TGG | - | chr5_1:8144270-8144289 | Msa0715210:intron | 35.0% |
| CAGTAAAAAGAACTGAGTTG+TGG | + | chr5_1:8144350-8144369 | None:intergenic | 35.0% | |
| ! | GTTTTCAACATACTTGCAAG+TGG | - | chr5_1:8144492-8144511 | Msa0715210:intron | 35.0% |
| TAATGATTGCATAAGTGTGC+GGG | - | chr5_1:8144538-8144557 | Msa0715210:intron | 35.0% | |
| AAACAGGACGATACATTACA+AGG | - | chr5_1:8144787-8144806 | Msa0715210:CDS | 35.0% | |
| AACAGGACGATACATTACAA+GGG | - | chr5_1:8144788-8144807 | Msa0715210:CDS | 35.0% | |
| !! | TAGGTTTGCTAGGTTACTTT+CGG | - | chr5_1:8145067-8145086 | Msa0715210:CDS | 35.0% |
| !! | ACTGTTCTTAGCATTGATGG+TGG | - | chr5_1:8142725-8142744 | Msa0715210:intron | 40.0% |
| CTGAAGTTGTGATTCAAGGT+AGG | + | chr5_1:8142786-8142805 | None:intergenic | 40.0% | |
| CTACCTTGAATCACAACTTC+AGG | - | chr5_1:8142784-8142803 | Msa0715210:intron | 40.0% | |
| ACAGGAGATAGACCATAATG+AGG | - | chr5_1:8142936-8142955 | Msa0715210:CDS | 40.0% | |
| TAGACCATAATGAGGATGCA+AGG | - | chr5_1:8142944-8142963 | Msa0715210:CDS | 40.0% | |
| CAATCCTTGCATCCTCATTA+TGG | + | chr5_1:8142951-8142970 | None:intergenic | 40.0% | |
| TTGACAGGAGCTAAGTACAA+TGG | - | chr5_1:8143350-8143369 | Msa0715210:intron | 40.0% | |
| !! | TGTTTTTGCACAGTCATGCA+TGG | - | chr5_1:8143515-8143534 | Msa0715210:CDS | 40.0% |
| ! | GCTAGTGGTACATCTAAAGT+TGG | + | chr5_1:8143610-8143629 | None:intergenic | 40.0% |
| GCTATGCAAATATCTGCTAG+TGG | + | chr5_1:8143625-8143644 | None:intergenic | 40.0% | |
| !! | TAGTGGGCTGGTAAATAAGT+TGG | + | chr5_1:8143661-8143680 | None:intergenic | 40.0% |
| !!! | TTTTTCTCGAAATAGTGGGC+TGG | + | chr5_1:8143673-8143692 | None:intergenic | 40.0% |
| GAATACAATCTCATCGATGG+TGG | - | chr5_1:8143718-8143737 | Msa0715210:intron | 40.0% | |
| GTCGTTCGATCTTAAATCAG+TGG | - | chr5_1:8143925-8143944 | Msa0715210:intron | 40.0% | |
| TGCAATTAGAGAAGTGACCA+AGG | - | chr5_1:8144119-8144138 | Msa0715210:CDS | 40.0% | |
| ACCAAGGATATGATAAGGCT+TGG | - | chr5_1:8144135-8144154 | Msa0715210:CDS | 40.0% | |
| CCAAGGATATGATAAGGCTT+GGG | - | chr5_1:8144136-8144155 | Msa0715210:CDS | 40.0% | |
| GCTAAGATGGTTGCTAAATG+GGG | - | chr5_1:8144243-8144262 | Msa0715210:intron | 40.0% | |
| !! | CAATGAAGCTAGCACTGATA+TGG | - | chr5_1:8144317-8144336 | Msa0715210:CDS | 40.0% |
| GTAGTTGTCTTGAGACTGAA+GGG | + | chr5_1:8144373-8144392 | None:intergenic | 40.0% | |
| CATACTTGCAAGTGGATAGA+TGG | - | chr5_1:8144500-8144519 | Msa0715210:intron | 40.0% | |
| CTTATGTGGTTGCTTGAAAC+AGG | - | chr5_1:8144771-8144790 | Msa0715210:CDS | 40.0% | |
| ACAGGACGATACATTACAAG+GGG | - | chr5_1:8144789-8144808 | Msa0715210:CDS | 40.0% | |
| ACTCGAGTGAATCTAGATAC+TGG | - | chr5_1:8144895-8144914 | Msa0715210:intron | 40.0% | |
| !!! | CCTTTTGAGTTCTTCCTCAA+TGG | + | chr5_1:8144950-8144969 | None:intergenic | 40.0% |
| CCATTGAGGAAGAACTCAAA+AGG | - | chr5_1:8144947-8144966 | Msa0715210:intron | 40.0% | |
| !! | GTTCTTAGCATTGATGGTGG+AGG | - | chr5_1:8142728-8142747 | Msa0715210:intron | 45.0% |
| AGGTAGGCAAGAATAACACC+AGG | + | chr5_1:8142770-8142789 | None:intergenic | 45.0% | |
| GTAATTGCTGGGACAAGTAC+AGG | - | chr5_1:8142985-8143004 | Msa0715210:CDS | 45.0% | |
| ! | TGGATTGGGAGTTGCTAACA+TGG | + | chr5_1:8143025-8143044 | None:intergenic | 45.0% |
| GTTAGCAACTCCCAATCCAA+AGG | - | chr5_1:8143026-8143045 | Msa0715210:intron | 45.0% | |
| GGACGGTTATCCTTTGGATT+GGG | + | chr5_1:8143039-8143058 | None:intergenic | 45.0% | |
| AGGACGGTTATCCTTTGGAT+TGG | + | chr5_1:8143040-8143059 | None:intergenic | 45.0% | |
| CCTTGGCAGCAAATAAAGGA+CGG | + | chr5_1:8143056-8143075 | None:intergenic | 45.0% | |
| TGTGTGCTAACAATCCGGTA+AGG | - | chr5_1:8143743-8143762 | Msa0715210:intron | 45.0% | |
| GTGTGCTAACAATCCGGTAA+GGG | - | chr5_1:8143744-8143763 | Msa0715210:intron | 45.0% | |
| ! | TGGACCGTTCGATTTGAAAC+CGG | - | chr5_1:8143868-8143887 | Msa0715210:intron | 45.0% |
| ! | CCCAAGCCTTATCATATCCT+TGG | + | chr5_1:8144139-8144158 | None:intergenic | 45.0% |
| ATGATAAGGCTTGGGAGAAG+TGG | - | chr5_1:8144144-8144163 | Msa0715210:CDS | 45.0% | |
| TGATAAGGCTTGGGAGAAGT+GGG | - | chr5_1:8144145-8144164 | Msa0715210:CDS | 45.0% | |
| GGAGAAGTGGGAATGGTATA+GGG | - | chr5_1:8144157-8144176 | Msa0715210:CDS | 45.0% | |
| ! | CTAAATGGGGTGCTTTGACT+TGG | - | chr5_1:8144256-8144275 | Msa0715210:intron | 45.0% |
| GGTAGTTGTCTTGAGACTGA+AGG | + | chr5_1:8144374-8144393 | None:intergenic | 45.0% | |
| ! | ACAAGGGGAATTAGCTTCTG+TGG | - | chr5_1:8144804-8144823 | Msa0715210:CDS | 45.0% |
| ! | GAGTTAAGGCACCCTTAGTT+AGG | + | chr5_1:8145027-8145046 | None:intergenic | 45.0% |
| !! | TTTAATTAATAGATATTATT+TGG | + | chr5_1:8144631-8144650 | None:intergenic | 5.0% |
| ATTGCTGGGACAAGTACAGG+CGG | - | chr5_1:8142988-8143007 | Msa0715210:CDS | 50.0% | |
| ! | CCGTCCTTTATTTGCTGCCA+AGG | - | chr5_1:8143053-8143072 | Msa0715210:intron | 50.0% |
| TGGCGTGTGTGCTAACAATC+CGG | - | chr5_1:8143738-8143757 | Msa0715210:intron | 50.0% | |
| ! | GGACCGTTCGATTTGAAACC+GGG | - | chr5_1:8143869-8143888 | Msa0715210:intron | 50.0% |
| ! | GACCGTTCGATTTGAAACCG+GGG | - | chr5_1:8143870-8143889 | Msa0715210:intron | 50.0% |
| ! | ACCGTTCGATTTGAAACCGG+GGG | - | chr5_1:8143871-8143890 | Msa0715210:intron | 50.0% |
| TCCCCCGGTTTCAAATCGAA+CGG | + | chr5_1:8143875-8143894 | None:intergenic | 50.0% | |
| GTGACACAATCTTGATCCCC+CGG | + | chr5_1:8143890-8143909 | None:intergenic | 50.0% | |
| GGGAGAAGTGGGAATGGTAT+AGG | - | chr5_1:8144156-8144175 | Msa0715210:CDS | 50.0% | |
| !! | TCCAGATAAGGGCACCATTG+AGG | - | chr5_1:8144933-8144952 | Msa0715210:intron | 50.0% |
| TCCTCAATGGTGCCCTTATC+TGG | + | chr5_1:8144937-8144956 | None:intergenic | 50.0% | |
| !! | ATTGATGGTGGAGGCGTCAG+AGG | - | chr5_1:8142737-8142756 | Msa0715210:intron | 55.0% |
| GGCGTCAGAGGAATCATTCC+TGG | - | chr5_1:8142749-8142768 | Msa0715210:intron | 55.0% | |
| AGGCTTGGGAGAAGTGGGAA+TGG | - | chr5_1:8144150-8144169 | Msa0715210:CDS | 55.0% | |
| ATCCGGTAAGGGCTACCCCA+AGG | - | chr5_1:8143755-8143774 | Msa0715210:intron | 60.0% | |
| TCCGGTAAGGGCTACCCCAA+GGG | - | chr5_1:8143756-8143775 | Msa0715210:intron | 60.0% | |
| GCCCTTGGGGTAGCCCTTAC+CGG | + | chr5_1:8143760-8143779 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 8142677 | 8145133 | 8142677 | ID=Msa0715210;Name=Msa0715210 |
| chr5_1 | mRNA | 8142677 | 8145133 | 8142677 | ID=Msa0715210-mRNA-1;Parent=Msa0715210;Name=Msa0715210-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|7|0|400 |
| chr5_1 | exon | 8145005 | 8145133 | 8145005 | ID=Msa0715210-mRNA-1:exon:3373;Parent=Msa0715210-mRNA-1 |
| chr5_1 | exon | 8144683 | 8144870 | 8144683 | ID=Msa0715210-mRNA-1:exon:3372;Parent=Msa0715210-mRNA-1 |
| chr5_1 | exon | 8144311 | 8144497 | 8144311 | ID=Msa0715210-mRNA-1:exon:3371;Parent=Msa0715210-mRNA-1 |
| chr5_1 | exon | 8144051 | 8144215 | 8144051 | ID=Msa0715210-mRNA-1:exon:3370;Parent=Msa0715210-mRNA-1 |
| chr5_1 | exon | 8143406 | 8143699 | 8143406 | ID=Msa0715210-mRNA-1:exon:3369;Parent=Msa0715210-mRNA-1 |
| chr5_1 | exon | 8142842 | 8143017 | 8142842 | ID=Msa0715210-mRNA-1:exon:3368;Parent=Msa0715210-mRNA-1 |
| chr5_1 | exon | 8142677 | 8142740 | 8142677 | ID=Msa0715210-mRNA-1:exon:3367;Parent=Msa0715210-mRNA-1 |
| chr5_1 | CDS | 8145005 | 8145133 | 8145005 | ID=Msa0715210-mRNA-1:cds;Parent=Msa0715210-mRNA-1 |
| chr5_1 | CDS | 8144683 | 8144870 | 8144683 | ID=Msa0715210-mRNA-1:cds;Parent=Msa0715210-mRNA-1 |
| chr5_1 | CDS | 8144311 | 8144497 | 8144311 | ID=Msa0715210-mRNA-1:cds;Parent=Msa0715210-mRNA-1 |
| chr5_1 | CDS | 8144051 | 8144215 | 8144051 | ID=Msa0715210-mRNA-1:cds;Parent=Msa0715210-mRNA-1 |
| chr5_1 | CDS | 8143406 | 8143699 | 8143406 | ID=Msa0715210-mRNA-1:cds;Parent=Msa0715210-mRNA-1 |
| chr5_1 | CDS | 8142842 | 8143017 | 8142842 | ID=Msa0715210-mRNA-1:cds;Parent=Msa0715210-mRNA-1 |
| chr5_1 | CDS | 8142677 | 8142740 | 8142677 | ID=Msa0715210-mRNA-1:cds;Parent=Msa0715210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
