Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932910 | AES74382.1 | 97.273 | 220 | 6 | 0 | 1 | 220 | 1 | 220 | 1.09e-152 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932910 | sp|Q6K5Q0|GL21_ORYSJ | 66.055 | 218 | 69 | 3 | 1 | 215 | 1 | 216 | 9.61e-93 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0932910 | 0.829006 | 6.552872e-55 | -8.615850e-47 |
| Msa0011010 | Msa0932910 | 0.815045 | 1.130576e-51 | -8.615850e-47 |
| Msa0011040 | Msa0932910 | 0.811440 | 6.994261e-51 | -8.615850e-47 |
| Msa0025570 | Msa0932910 | 0.807590 | 4.691963e-50 | -8.615850e-47 |
| Msa0048380 | Msa0932910 | 0.819064 | 1.413057e-52 | -8.615850e-47 |
| Msa0059880 | Msa0932910 | 0.816915 | 4.323650e-52 | -8.615850e-47 |
| Msa0073110 | Msa0932910 | 0.805813 | 1.113421e-49 | -8.615850e-47 |
| Msa0085710 | Msa0932910 | 0.816294 | 5.956455e-52 | -8.615850e-47 |
| Msa0604280 | Msa0932910 | 0.801054 | 1.078864e-48 | -8.615850e-47 |
| Msa0610190 | Msa0932910 | 0.800038 | 1.737917e-48 | -8.615850e-47 |
| Msa0614960 | Msa0932910 | 0.800684 | 1.284160e-48 | -8.615850e-47 |
| Msa0630130 | Msa0932910 | 0.844366 | 7.905633e-59 | -8.615850e-47 |
| Msa0631700 | Msa0932910 | 0.802209 | 6.252112e-49 | -8.615850e-47 |
| Msa0634290 | Msa0932910 | 0.840618 | 7.800522e-58 | -8.615850e-47 |
| Msa0639400 | Msa0932910 | 0.809958 | 1.462469e-50 | -8.615850e-47 |
| Msa0639410 | Msa0932910 | 0.828975 | 6.668479e-55 | -8.615850e-47 |
| Msa0651820 | Msa0932910 | 0.807082 | 6.014441e-50 | -8.615850e-47 |
| Msa0668210 | Msa0932910 | 0.830975 | 2.168792e-55 | -8.615850e-47 |
| Msa0668220 | Msa0932910 | 0.830895 | 2.269219e-55 | -8.615850e-47 |
| Msa0668230 | Msa0932910 | 0.833940 | 3.996336e-56 | -8.615850e-47 |
| Msa0671490 | Msa0932910 | 0.833490 | 5.175173e-56 | -8.615850e-47 |
| Msa0682410 | Msa0932910 | 0.828290 | 9.758422e-55 | -8.615850e-47 |
| Msa0682420 | Msa0932910 | 0.813705 | 2.235662e-51 | -8.615850e-47 |
| Msa0685080 | Msa0932910 | 0.809177 | 2.151992e-50 | -8.615850e-47 |
| Msa0711230 | Msa0932910 | 0.810208 | 1.292371e-50 | -8.615850e-47 |
| Msa0711240 | Msa0932910 | 0.837160 | 6.122478e-57 | -8.615850e-47 |
| Msa0715260 | Msa0932910 | 0.807592 | 4.688670e-50 | -8.615850e-47 |
| Msa0728210 | Msa0932910 | 0.821408 | 4.103501e-53 | -8.615850e-47 |
| Msa0728520 | Msa0932910 | 0.825703 | 4.056611e-54 | -8.615850e-47 |
| Msa0738570 | Msa0932910 | 0.805280 | 1.440545e-49 | -8.615850e-47 |
| Msa0757120 | Msa0932910 | 0.808980 | 2.371972e-50 | -8.615850e-47 |
| Msa0757240 | Msa0932910 | 0.808784 | 2.612291e-50 | -8.615850e-47 |
| Msa0776540 | Msa0932910 | 0.826514 | 2.602630e-54 | -8.615850e-47 |
| Msa0783580 | Msa0932910 | 0.811561 | 6.583647e-51 | -8.615850e-47 |
| Msa0787860 | Msa0932910 | 0.808080 | 3.691281e-50 | -8.615850e-47 |
| Msa0789410 | Msa0932910 | 0.816898 | 4.361836e-52 | -8.615850e-47 |
| Msa0792330 | Msa0932910 | 0.805086 | 1.581630e-49 | -8.615850e-47 |
| Msa0793570 | Msa0932910 | 0.806009 | 1.012677e-49 | -8.615850e-47 |
| Msa0798150 | Msa0932910 | 0.816321 | 5.872219e-52 | -8.615850e-47 |
| Msa0798230 | Msa0932910 | 0.807185 | 5.718262e-50 | -8.615850e-47 |
| Msa0816140 | Msa0932910 | 0.812420 | 4.279037e-51 | -8.615850e-47 |
| Msa0819110 | Msa0932910 | 0.803790 | 2.945971e-49 | -8.615850e-47 |
| Msa0824850 | Msa0932910 | 0.817236 | 3.662190e-52 | -8.615850e-47 |
| Msa0836740 | Msa0932910 | 0.808853 | 2.525572e-50 | -8.615850e-47 |
| Msa0121320 | Msa0932910 | 0.813927 | 1.997618e-51 | -8.615850e-47 |
| Msa0150910 | Msa0932910 | 0.819218 | 1.303566e-52 | -8.615850e-47 |
| Msa0160580 | Msa0932910 | 0.804495 | 2.101361e-49 | -8.615850e-47 |
| Msa0166180 | Msa0932910 | 0.810703 | 1.010364e-50 | -8.615850e-47 |
| Msa0177550 | Msa0932910 | 0.827819 | 1.267372e-54 | -8.615850e-47 |
| Msa0195190 | Msa0932910 | 0.805081 | 1.585952e-49 | -8.615850e-47 |
| Msa0202060 | Msa0932910 | 0.810625 | 1.050242e-50 | -8.615850e-47 |
| Msa0207640 | Msa0932910 | 0.827296 | 1.691934e-54 | -8.615850e-47 |
| Msa0207970 | Msa0932910 | 0.806198 | 9.243692e-50 | -8.615850e-47 |
| Msa0225920 | Msa0932910 | 0.832064 | 1.170022e-55 | -8.615850e-47 |
| Msa0234130 | Msa0932910 | 0.829559 | 4.811588e-55 | -8.615850e-47 |
| Msa0366510 | Msa0932910 | 0.825920 | 3.602010e-54 | -8.615850e-47 |
| Msa0370620 | Msa0932910 | 0.806091 | 9.733034e-50 | -8.615850e-47 |
| Msa0396700 | Msa0932910 | 0.803844 | 2.871151e-49 | -8.615850e-47 |
| Msa0409490 | Msa0932910 | 0.814627 | 1.399125e-51 | -8.615850e-47 |
| Msa0414480 | Msa0932910 | 0.817328 | 3.491598e-52 | -8.615850e-47 |
| Msa0418150 | Msa0932910 | 0.813917 | 2.007980e-51 | -8.615850e-47 |
| Msa0418160 | Msa0932910 | 0.806429 | 8.260517e-50 | -8.615850e-47 |
| Msa0444210 | Msa0932910 | 0.803600 | 3.227243e-49 | -8.615850e-47 |
| Msa0445530 | Msa0932910 | 0.800402 | 1.465774e-48 | -8.615850e-47 |
| Msa0454770 | Msa0932910 | 0.816320 | 5.875972e-52 | -8.615850e-47 |
| Msa0464300 | Msa0932910 | 0.837794 | 4.213097e-57 | -8.615850e-47 |
| Msa0464310 | Msa0932910 | 0.819821 | 9.495313e-53 | -8.615850e-47 |
| Msa0240580 | Msa0932910 | 0.804818 | 1.799622e-49 | -8.615850e-47 |
| Msa0242830 | Msa0932910 | 0.809156 | 2.174391e-50 | -8.615850e-47 |
| Msa0245660 | Msa0932910 | 0.854068 | 1.574283e-61 | -8.615850e-47 |
| Msa0248320 | Msa0932910 | 0.802949 | 4.400190e-49 | -8.615850e-47 |
| Msa0258010 | Msa0932910 | 0.808027 | 3.788219e-50 | -8.615850e-47 |
| Msa0266640 | Msa0932910 | 0.824815 | 6.580687e-54 | -8.615850e-47 |
| Msa0266650 | Msa0932910 | 0.819727 | 9.979779e-53 | -8.615850e-47 |
| Msa0267710 | Msa0932910 | 0.812837 | 3.468090e-51 | -8.615850e-47 |
| Msa0274260 | Msa0932910 | 0.843681 | 1.206457e-58 | -8.615850e-47 |
| Msa0278460 | Msa0932910 | 0.823398 | 1.414954e-53 | -8.615850e-47 |
| Msa0278960 | Msa0932910 | 0.810078 | 1.378239e-50 | -8.615850e-47 |
| Msa0318370 | Msa0932910 | 0.813567 | 2.398328e-51 | -8.615850e-47 |
| Msa0322460 | Msa0932910 | 0.829947 | 3.870365e-55 | -8.615850e-47 |
| Msa0328090 | Msa0932910 | 0.800602 | 1.334603e-48 | -8.615850e-47 |
| Msa0335340 | Msa0932910 | 0.820435 | 6.868206e-53 | -8.615850e-47 |
| Msa0349910 | Msa0932910 | 0.816887 | 4.386675e-52 | -8.615850e-47 |
| Msa0356240 | Msa0932910 | 0.805376 | 1.375668e-49 | -8.615850e-47 |
| Msa0356320 | Msa0932910 | 0.809128 | 2.204726e-50 | -8.615850e-47 |
| Msa0361700 | Msa0932910 | 0.805661 | 1.198510e-49 | -8.615850e-47 |
| Msa0489370 | Msa0932910 | 0.813507 | 2.471493e-51 | -8.615850e-47 |
| Msa0491800 | Msa0932910 | 0.807996 | 3.846918e-50 | -8.615850e-47 |
| Msa0493710 | Msa0932910 | 0.807419 | 5.102907e-50 | -8.615850e-47 |
| Msa0502940 | Msa0932910 | 0.820846 | 5.528498e-53 | -8.615850e-47 |
| Msa0515130 | Msa0932910 | 0.823345 | 1.455996e-53 | -8.615850e-47 |
| Msa0529420 | Msa0932910 | 0.842004 | 3.368576e-58 | -8.615850e-47 |
| Msa0531800 | Msa0932910 | 0.820132 | 8.061463e-53 | -8.615850e-47 |
| Msa0533510 | Msa0932910 | 0.822580 | 2.196021e-53 | -8.615850e-47 |
| Msa0533520 | Msa0932910 | 0.819082 | 1.400154e-52 | -8.615850e-47 |
| Msa0535570 | Msa0932910 | 0.804450 | 2.148053e-49 | -8.615850e-47 |
| Msa0538440 | Msa0932910 | 0.860809 | 1.594418e-63 | -8.615850e-47 |
| Msa0538450 | Msa0932910 | 0.858295 | 9.089969e-63 | -8.615850e-47 |
| Msa0538520 | Msa0932910 | 0.859555 | 3.813370e-63 | -8.615850e-47 |
| Msa0538530 | Msa0932910 | 0.844512 | 7.219273e-59 | -8.615850e-47 |
| Msa0540640 | Msa0932910 | 0.803025 | 4.243499e-49 | -8.615850e-47 |
| Msa0546760 | Msa0932910 | 0.809566 | 1.775958e-50 | -8.615850e-47 |
| Msa0548790 | Msa0932910 | 0.806211 | 9.184778e-50 | -8.615850e-47 |
| Msa0554660 | Msa0932910 | 0.811560 | 6.587093e-51 | -8.615850e-47 |
| Msa0589720 | Msa0932910 | 0.861348 | 1.093211e-63 | -8.615850e-47 |
| Msa0589730 | Msa0932910 | 0.813938 | 1.986921e-51 | -8.615850e-47 |
| Msa0589740 | Msa0932910 | 0.859328 | 4.463541e-63 | -8.615850e-47 |
| Msa0589750 | Msa0932910 | 0.824162 | 9.370084e-54 | -8.615850e-47 |
| Msa0591040 | Msa0932910 | 0.817036 | 4.061542e-52 | -8.615850e-47 |
| Msa0591490 | Msa0932910 | 0.806040 | 9.976216e-50 | -8.615850e-47 |
| Msa0594320 | Msa0932910 | 0.821263 | 4.430731e-53 | -8.615850e-47 |
| Msa0594330 | Msa0932910 | 0.843298 | 1.526739e-58 | -8.615850e-47 |
| Msa0601400 | Msa0932910 | 0.814349 | 1.612276e-51 | -8.615850e-47 |
| Msa0855260 | Msa0932910 | 0.819663 | 1.032146e-52 | -8.615850e-47 |
| Msa0859230 | Msa0932910 | 0.807011 | 6.224850e-50 | -8.615850e-47 |
| Msa0863860 | Msa0932910 | 0.803147 | 4.005237e-49 | -8.615850e-47 |
| Msa0864160 | Msa0932910 | 0.809493 | 1.841637e-50 | -8.615850e-47 |
| Msa0868820 | Msa0932910 | 0.826720 | 2.323166e-54 | -8.615850e-47 |
| Msa0868870 | Msa0932910 | 0.867542 | 1.267749e-65 | -8.615850e-47 |
| Msa0886370 | Msa0932910 | 0.817865 | 2.641942e-52 | -8.615850e-47 |
| Msa0893220 | Msa0932910 | 0.803425 | 3.507406e-49 | -8.615850e-47 |
| Msa0896920 | Msa0932910 | 0.869831 | 2.305843e-66 | -8.615850e-47 |
| Msa0896950 | Msa0932910 | 0.824399 | 8.242955e-54 | -8.615850e-47 |
| Msa0902340 | Msa0932910 | 0.807923 | 3.987157e-50 | -8.615850e-47 |
| Msa0913500 | Msa0932910 | 0.813232 | 2.840964e-51 | -8.615850e-47 |
| Msa0932890 | Msa0932910 | 0.805275 | 1.444434e-49 | -8.615850e-47 |
| Msa0932900 | Msa0932910 | 0.862821 | 3.862315e-64 | -8.615850e-47 |
| Msa0932910 | Msa0932930 | 0.932422 | 8.723433e-95 | -8.615850e-47 |
| Msa0932910 | Msa0933580 | 0.841301 | 5.162980e-58 | -8.615850e-47 |
| Msa0932910 | Msa0933590 | 0.814242 | 1.702393e-51 | -8.615850e-47 |
| Msa0932910 | Msa0933610 | 0.861263 | 1.159903e-63 | -8.615850e-47 |
| Msa0932910 | Msa0951060 | 0.801383 | 9.240716e-49 | -8.615850e-47 |
| Msa0932910 | Msa0962290 | 0.832685 | 8.208338e-56 | -8.615850e-47 |
| Msa0932910 | Msa0964510 | 0.826758 | 2.274951e-54 | -8.615850e-47 |
| Msa0932910 | Msa0970790 | 0.882425 | 1.053506e-70 | -8.615850e-47 |
| Msa0932910 | Msa0970820 | 0.876957 | 9.236979e-69 | -8.615850e-47 |
| Msa0932910 | Msa0985260 | 0.809243 | 2.083158e-50 | -8.615850e-47 |
| Msa0932910 | Msa0987550 | 0.801601 | 8.338557e-49 | -8.615850e-47 |
| Msa0932910 | Msa0996980 | 0.825123 | 5.566264e-54 | -8.615850e-47 |
| Msa0932910 | Msa1006030 | 0.809993 | 1.437574e-50 | -8.615850e-47 |
| Msa0932910 | Msa1006170 | 0.829348 | 5.413590e-55 | -8.615850e-47 |
| Msa0932910 | Msa1022510 | 0.802921 | 4.459583e-49 | -8.615850e-47 |
| Msa0932910 | Msa1024350 | 0.823867 | 1.099060e-53 | -8.615850e-47 |
| Msa0932910 | Msa1024420 | 0.821597 | 3.710088e-53 | -8.615850e-47 |
| Msa0932910 | Msa1026050 | 0.824287 | 8.760929e-54 | -8.615850e-47 |
| Msa0932910 | Msa1037360 | 0.808188 | 3.501031e-50 | -8.615850e-47 |
| Msa0932910 | Msa1037530 | 0.807718 | 4.407022e-50 | -8.615850e-47 |
| Msa0932910 | Msa1041910 | 0.801221 | 9.974626e-49 | -8.615850e-47 |
| Msa0932910 | Msa1046220 | 0.809350 | 1.976587e-50 | -8.615850e-47 |
| Msa0932910 | Msa1048350 | 0.820937 | 5.268618e-53 | -8.615850e-47 |
| Msa0932910 | Msa1048390 | 0.808871 | 2.502874e-50 | -8.615850e-47 |
| Msa0932910 | Msa1061780 | 0.811026 | 8.599323e-51 | -8.615850e-47 |
| Msa0932910 | Msa1064940 | 0.841117 | 5.769872e-58 | -8.615850e-47 |
| Msa0932910 | Msa1069440 | -0.812090 | 5.050196e-51 | -8.615850e-47 |
| Msa0932910 | Msa1074560 | 0.808290 | 3.330693e-50 | -8.615850e-47 |
| Msa0932910 | Msa1083100 | 0.808575 | 2.895658e-50 | -8.615850e-47 |
| Msa0932910 | Msa1087380 | 0.828041 | 1.120572e-54 | -8.615850e-47 |
| Msa0932910 | Msa1098100 | 0.803409 | 3.534130e-49 | -8.615850e-47 |
| Msa0932910 | Msa1100330 | 0.826675 | 2.381556e-54 | -8.615850e-47 |
| Msa0932910 | Msa1103450 | 0.803306 | 3.713203e-49 | -8.615850e-47 |
| Msa0932910 | Msa1109540 | 0.805200 | 1.497026e-49 | -8.615850e-47 |
| Msa0932910 | Msa1109880 | 0.809523 | 1.813951e-50 | -8.615850e-47 |
| Msa0932910 | Msa1124220 | 0.812422 | 4.274139e-51 | -8.615850e-47 |
| Msa0932910 | Msa1130410 | 0.808664 | 2.771762e-50 | -8.615850e-47 |
| Msa0932910 | Msa1138110 | 0.836928 | 7.017551e-57 | -8.615850e-47 |
| Msa0932910 | Msa1152330 | 0.808345 | 3.241458e-50 | -8.615850e-47 |
| Msa0932910 | Msa1162430 | 0.805053 | 1.607057e-49 | -8.615850e-47 |
| Msa0932910 | Msa1167960 | 0.803407 | 3.538671e-49 | -8.615850e-47 |
| Msa0932910 | Msa1170340 | 0.835634 | 1.497289e-56 | -8.615850e-47 |
| Msa0932910 | Msa1173290 | 0.825723 | 4.011576e-54 | -8.615850e-47 |
| Msa0932910 | Msa1177090 | 0.820853 | 5.506151e-53 | -8.615850e-47 |
| Msa0932910 | Msa1181680 | 0.813761 | 2.173067e-51 | -8.615850e-47 |
| Msa0932910 | Msa1208830 | 0.803168 | 3.964553e-49 | -8.615850e-47 |
| Msa0932910 | Msa1208910 | 0.807993 | 3.852385e-50 | -8.615850e-47 |
| Msa0932910 | Msa1223990 | 0.816338 | 5.821612e-52 | -8.615850e-47 |
| Msa0932910 | Msa1239190 | 0.801106 | 1.053024e-48 | -8.615850e-47 |
| Msa0932910 | Msa1263000 | 0.804827 | 1.791979e-49 | -8.615850e-47 |
| Msa0932910 | Msa1263110 | 0.809182 | 2.147390e-50 | -8.615850e-47 |
| Msa0932910 | Msa1263120 | 0.818349 | 2.053811e-52 | -8.615850e-47 |
| Msa0932910 | Msa1263370 | 0.802899 | 4.507707e-49 | -8.615850e-47 |
| Msa0932910 | Msa1302010 | 0.803531 | 3.333915e-49 | -8.615850e-47 |
| Msa0932910 | Msa1323150 | 0.836419 | 9.461013e-57 | -8.615850e-47 |
| Msa0932910 | Msa1355330 | 0.824542 | 7.628324e-54 | -8.615850e-47 |
| Msa0932910 | Msa1355340 | 0.800643 | 1.309305e-48 | -8.615850e-47 |
| Msa0932910 | Msa1357840 | 0.807702 | 4.442399e-50 | -8.615850e-47 |
| Msa0932910 | Msa1362520 | 0.803977 | 2.694035e-49 | -8.615850e-47 |
| Msa0932910 | Msa1373560 | 0.800507 | 1.395083e-48 | -8.615850e-47 |
| Msa0932910 | Msa1409600 | 0.802508 | 5.427857e-49 | -8.615850e-47 |
| Msa0932910 | Msa1411550 | 0.816151 | 6.410694e-52 | -8.615850e-47 |
| Msa0932910 | Msa1419390 | 0.813672 | 2.273445e-51 | -8.615850e-47 |
| Msa0932910 | Msa1421130 | 0.808643 | 2.800373e-50 | -8.615850e-47 |
| Msa0932910 | Msa1441300 | 0.821892 | 3.171179e-53 | -8.615850e-47 |
| Msa0932910 | Msa1446090 | 0.820114 | 8.136603e-53 | -8.615850e-47 |
| Msa0932910 | Msa1448150 | 0.834527 | 2.846799e-56 | -8.615850e-47 |
| Msa0932910 | Msa1456600 | 0.819239 | 1.288887e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932910 | MtrunA17_Chr6g0449751 | 97.273 | 220 | 6 | 0 | 1 | 220 | 1 | 220 | 1.01e-156 | 432 |
| Msa0932910 | MtrunA17_Chr6g0449731 | 95.434 | 219 | 10 | 0 | 1 | 219 | 1 | 219 | 2.84e-152 | 421 |
| Msa0932910 | MtrunA17_Chr6g0449771 | 95.000 | 220 | 11 | 0 | 1 | 220 | 1 | 220 | 3.34e-152 | 421 |
| Msa0932910 | MtrunA17_Chr6g0449761 | 95.370 | 216 | 10 | 0 | 1 | 216 | 1 | 216 | 9.70e-151 | 418 |
| Msa0932910 | MtrunA17_Chr1g0189841 | 80.909 | 220 | 39 | 3 | 4 | 220 | 3 | 222 | 1.12e-125 | 354 |
| Msa0932910 | MtrunA17_Chr2g0285871 | 77.928 | 222 | 46 | 3 | 1 | 220 | 1 | 221 | 4.27e-120 | 340 |
| Msa0932910 | MtrunA17_Chr4g0007041 | 76.018 | 221 | 52 | 1 | 1 | 220 | 1 | 221 | 4.82e-120 | 340 |
| Msa0932910 | MtrunA17_Chr4g0007051 | 77.477 | 222 | 47 | 3 | 1 | 220 | 1 | 221 | 6.27e-120 | 339 |
| Msa0932910 | MtrunA17_Chr4g0007031 | 77.477 | 222 | 47 | 3 | 1 | 220 | 1 | 221 | 6.84e-120 | 339 |
| Msa0932910 | MtrunA17_Chr5g0419971 | 77.477 | 222 | 47 | 3 | 1 | 220 | 1 | 221 | 6.84e-120 | 339 |
| Msa0932910 | MtrunA17_Chr5g0419981 | 77.477 | 222 | 47 | 3 | 1 | 220 | 1 | 221 | 6.84e-120 | 339 |
| Msa0932910 | MtrunA17_Chr6g0449781 | 77.273 | 220 | 49 | 1 | 1 | 220 | 1 | 219 | 4.78e-117 | 332 |
| Msa0932910 | MtrunA17_Chr6g0449791 | 73.077 | 208 | 55 | 1 | 1 | 207 | 1 | 208 | 2.92e-105 | 302 |
| Msa0932910 | MtrunA17_Chr1g0156131 | 62.312 | 199 | 65 | 2 | 19 | 215 | 19 | 209 | 1.12e-83 | 247 |
| Msa0932910 | MtrunA17_Chr2g0292831 | 62.312 | 199 | 68 | 3 | 19 | 215 | 19 | 212 | 2.42e-82 | 244 |
| Msa0932910 | MtrunA17_Chr2g0292901 | 62.000 | 200 | 68 | 4 | 19 | 215 | 19 | 213 | 9.33e-80 | 238 |
| Msa0932910 | MtrunA17_Chr2g0292861 | 64.535 | 172 | 58 | 2 | 47 | 215 | 7 | 178 | 2.27e-75 | 225 |
| Msa0932910 | MtrunA17_Chr2g0292841 | 64.535 | 172 | 58 | 2 | 47 | 215 | 7 | 178 | 6.71e-74 | 221 |
| Msa0932910 | MtrunA17_Chr1g0193671 | 46.667 | 210 | 102 | 4 | 11 | 214 | 8 | 213 | 8.16e-59 | 184 |
| Msa0932910 | MtrunA17_Chr7g0271211 | 51.020 | 196 | 90 | 3 | 22 | 215 | 20 | 211 | 2.38e-56 | 178 |
| Msa0932910 | MtrunA17_Chr1g0193421 | 48.000 | 200 | 98 | 3 | 18 | 215 | 20 | 215 | 2.68e-55 | 176 |
| Msa0932910 | MtrunA17_Chr2g0292911 | 67.797 | 118 | 36 | 1 | 47 | 162 | 7 | 124 | 7.47e-53 | 167 |
| Msa0932910 | MtrunA17_Chr5g0414971 | 47.208 | 197 | 97 | 4 | 22 | 215 | 27 | 219 | 3.60e-52 | 167 |
| Msa0932910 | MtrunA17_Chr1g0210761 | 42.791 | 215 | 107 | 6 | 3 | 215 | 7 | 207 | 4.70e-48 | 157 |
| Msa0932910 | MtrunA17_Chr1g0178711 | 38.914 | 221 | 124 | 5 | 2 | 215 | 5 | 221 | 1.59e-45 | 150 |
| Msa0932910 | MtrunA17_Chr8g0344021 | 45.550 | 191 | 93 | 4 | 1 | 189 | 3 | 184 | 2.42e-43 | 145 |
| Msa0932910 | MtrunA17_Chr2g0300561 | 44.920 | 187 | 95 | 4 | 28 | 212 | 23 | 203 | 1.10e-41 | 140 |
| Msa0932910 | MtrunA17_Chr2g0300581 | 40.000 | 215 | 116 | 6 | 1 | 213 | 1 | 204 | 1.38e-37 | 130 |
| Msa0932910 | MtrunA17_Chr2g0300591 | 40.187 | 214 | 115 | 6 | 1 | 212 | 1 | 203 | 1.76e-37 | 129 |
| Msa0932910 | MtrunA17_Chr8g0335851 | 40.000 | 185 | 107 | 3 | 5 | 188 | 10 | 191 | 3.87e-35 | 124 |
| Msa0932910 | MtrunA17_Chr8g0343911 | 36.744 | 215 | 121 | 5 | 1 | 213 | 1 | 202 | 4.20e-35 | 123 |
| Msa0932910 | MtrunA17_Chr8g0343934 | 37.327 | 217 | 122 | 6 | 1 | 215 | 1 | 205 | 1.23e-34 | 122 |
| Msa0932910 | MtrunA17_Chr3g0084531 | 38.498 | 213 | 117 | 5 | 4 | 215 | 6 | 205 | 3.42e-34 | 121 |
| Msa0932910 | MtrunA17_Chr8g0343954 | 39.683 | 189 | 106 | 4 | 28 | 215 | 24 | 205 | 1.27e-33 | 119 |
| Msa0932910 | MtrunA17_Chr2g0297231 | 37.615 | 218 | 120 | 6 | 1 | 215 | 1 | 205 | 4.77e-33 | 118 |
| Msa0932910 | MtrunA17_Chr2g0313961 | 38.191 | 199 | 115 | 4 | 18 | 215 | 14 | 205 | 6.96e-33 | 118 |
| Msa0932910 | MtrunA17_Chr3g0084521 | 37.441 | 211 | 118 | 5 | 6 | 215 | 7 | 204 | 2.00e-32 | 116 |
| Msa0932910 | MtrunA17_Chr2g0297241 | 37.156 | 218 | 121 | 6 | 1 | 215 | 1 | 205 | 3.02e-32 | 116 |
| Msa0932910 | MtrunA17_Chr3g0084511 | 36.967 | 211 | 119 | 5 | 6 | 215 | 7 | 204 | 4.42e-32 | 115 |
| Msa0932910 | MtrunA17_Chr2g0302171 | 39.267 | 191 | 108 | 4 | 26 | 215 | 22 | 205 | 5.80e-32 | 115 |
| Msa0932910 | MtrunA17_Chr2g0301611 | 36.697 | 218 | 122 | 6 | 1 | 215 | 1 | 205 | 1.46e-31 | 114 |
| Msa0932910 | MtrunA17_Chr8g0344051 | 37.557 | 221 | 117 | 6 | 1 | 215 | 3 | 208 | 3.01e-31 | 114 |
| Msa0932910 | MtrunA17_Chr3g0130241 | 34.419 | 215 | 134 | 4 | 1 | 211 | 65 | 276 | 7.38e-31 | 114 |
| Msa0932910 | MtrunA17_Chr8g0343961 | 37.173 | 191 | 112 | 4 | 26 | 215 | 22 | 205 | 1.02e-30 | 112 |
| Msa0932910 | MtrunA17_Chr8g0343921 | 39.474 | 190 | 105 | 6 | 28 | 215 | 22 | 203 | 2.02e-30 | 111 |
| Msa0932910 | MtrunA17_Chr4g0003361 | 38.421 | 190 | 108 | 5 | 27 | 215 | 20 | 201 | 3.01e-30 | 110 |
| Msa0932910 | MtrunA17_Chr8g0344031 | 35.160 | 219 | 126 | 6 | 1 | 215 | 1 | 207 | 4.29e-29 | 108 |
| Msa0932910 | MtrunA17_Chr2g0286171 | 35.648 | 216 | 128 | 6 | 1 | 215 | 3 | 208 | 5.10e-29 | 108 |
| Msa0932910 | MtrunA17_Chr8g0344041 | 35.052 | 194 | 117 | 4 | 24 | 215 | 23 | 209 | 1.21e-28 | 107 |
| Msa0932910 | MtrunA17_Chr5g0411961 | 34.101 | 217 | 129 | 6 | 1 | 215 | 1 | 205 | 6.58e-28 | 105 |
| Msa0932910 | MtrunA17_Chr2g0302541 | 36.458 | 192 | 112 | 5 | 26 | 215 | 22 | 205 | 2.62e-27 | 103 |
| Msa0932910 | MtrunA17_Chr4g0012651 | 36.126 | 191 | 114 | 4 | 26 | 215 | 22 | 205 | 3.45e-27 | 103 |
| Msa0932910 | MtrunA17_Chr7g0217811 | 35.602 | 191 | 115 | 4 | 26 | 215 | 22 | 205 | 4.51e-27 | 102 |
| Msa0932910 | MtrunA17_Chr4g0026191 | 39.161 | 143 | 82 | 3 | 74 | 215 | 67 | 205 | 2.75e-26 | 100 |
| Msa0932910 | MtrunA17_Chr2g0321601 | 34.884 | 215 | 121 | 7 | 2 | 215 | 7 | 203 | 3.50e-26 | 100 |
| Msa0932910 | MtrunA17_Chr4g0026201 | 39.161 | 143 | 82 | 3 | 74 | 215 | 67 | 205 | 3.63e-26 | 100 |
| Msa0932910 | MtrunA17_Chr2g0321581 | 40.741 | 135 | 75 | 3 | 82 | 215 | 74 | 204 | 1.91e-25 | 98.6 |
| Msa0932910 | MtrunA17_Chr2g0321591 | 40.741 | 135 | 75 | 3 | 82 | 215 | 74 | 204 | 2.89e-25 | 98.2 |
| Msa0932910 | MtrunA17_Chr3g0115141 | 35.079 | 191 | 110 | 6 | 28 | 215 | 27 | 206 | 4.79e-25 | 97.8 |
| Msa0932910 | MtrunA17_Chr2g0292881 | 71.930 | 57 | 16 | 0 | 93 | 149 | 1 | 57 | 6.90e-23 | 87.4 |
| Msa0932910 | MtrunA17_Chr3g0084551 | 32.870 | 216 | 121 | 9 | 1 | 212 | 1 | 196 | 9.09e-19 | 81.6 |
| Msa0932910 | MtrunA17_Chr3g0084501 | 39.815 | 108 | 56 | 3 | 4 | 110 | 6 | 105 | 2.21e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932910 | AT5G39120.1 | 63.889 | 216 | 75 | 2 | 3 | 215 | 4 | 219 | 7.30e-92 | 269 |
| Msa0932910 | AT5G39150.1 | 63.426 | 216 | 76 | 2 | 3 | 215 | 4 | 219 | 5.46e-91 | 266 |
| Msa0932910 | AT5G39180.1 | 63.426 | 216 | 76 | 2 | 3 | 215 | 4 | 219 | 7.03e-91 | 266 |
| Msa0932910 | AT5G39110.1 | 64.055 | 217 | 74 | 3 | 2 | 215 | 5 | 220 | 1.14e-89 | 263 |
| Msa0932910 | AT5G38940.1 | 66.327 | 196 | 64 | 1 | 22 | 215 | 26 | 221 | 5.23e-89 | 261 |
| Msa0932910 | AT5G38940.2 | 66.327 | 196 | 64 | 1 | 22 | 215 | 50 | 245 | 1.10e-88 | 262 |
| Msa0932910 | AT3G05950.1 | 63.964 | 222 | 72 | 5 | 1 | 215 | 1 | 221 | 3.40e-88 | 260 |
| Msa0932910 | AT5G38930.1 | 66.667 | 198 | 64 | 1 | 20 | 215 | 24 | 221 | 3.74e-88 | 259 |
| Msa0932910 | AT5G39130.1 | 65.829 | 199 | 64 | 3 | 20 | 215 | 22 | 219 | 7.45e-88 | 259 |
| Msa0932910 | AT5G39160.1 | 66.332 | 199 | 63 | 3 | 20 | 215 | 22 | 219 | 8.40e-88 | 258 |
| Msa0932910 | AT5G39190.1 | 66.332 | 199 | 63 | 3 | 20 | 215 | 22 | 219 | 1.47e-87 | 258 |
| Msa0932910 | AT5G38910.1 | 63.014 | 219 | 77 | 4 | 1 | 215 | 1 | 219 | 3.00e-86 | 254 |
| Msa0932910 | AT5G38960.1 | 63.682 | 201 | 70 | 2 | 18 | 215 | 22 | 222 | 1.08e-85 | 253 |
| Msa0932910 | AT4G14630.1 | 64.322 | 199 | 68 | 2 | 20 | 215 | 24 | 222 | 2.80e-84 | 249 |
| Msa0932910 | AT5G39160.3 | 63.819 | 199 | 64 | 3 | 20 | 215 | 22 | 215 | 4.63e-83 | 246 |
| Msa0932910 | AT3G04200.1 | 64.115 | 209 | 70 | 4 | 11 | 215 | 15 | 222 | 9.80e-81 | 241 |
| Msa0932910 | AT3G04150.1 | 56.757 | 222 | 88 | 5 | 1 | 215 | 1 | 221 | 7.57e-75 | 226 |
| Msa0932910 | AT5G39190.2 | 59.898 | 197 | 57 | 2 | 20 | 215 | 22 | 197 | 4.28e-74 | 223 |
| Msa0932910 | AT3G04150.2 | 54.274 | 234 | 88 | 5 | 1 | 215 | 1 | 234 | 6.44e-74 | 224 |
| Msa0932910 | AT5G39160.2 | 59.391 | 197 | 58 | 2 | 20 | 215 | 22 | 197 | 9.70e-74 | 222 |
| Msa0932910 | AT3G04190.1 | 58.824 | 204 | 80 | 3 | 15 | 215 | 19 | 221 | 1.70e-73 | 222 |
| Msa0932910 | AT3G04180.1 | 56.863 | 204 | 84 | 3 | 15 | 215 | 19 | 221 | 3.81e-71 | 216 |
| Msa0932910 | AT3G04170.1 | 55.405 | 222 | 88 | 6 | 1 | 215 | 1 | 218 | 8.23e-71 | 216 |
| Msa0932910 | AT5G38910.2 | 51.142 | 219 | 66 | 5 | 1 | 215 | 1 | 182 | 8.77e-60 | 186 |
| Msa0932910 | AT1G09560.1 | 50.254 | 197 | 92 | 3 | 22 | 216 | 24 | 216 | 1.26e-57 | 182 |
| Msa0932910 | AT1G02335.1 | 47.980 | 198 | 97 | 3 | 20 | 215 | 22 | 215 | 3.94e-57 | 181 |
| Msa0932910 | AT3G62020.1 | 47.642 | 212 | 104 | 4 | 7 | 215 | 8 | 215 | 6.92e-57 | 180 |
| Msa0932910 | AT1G18970.1 | 45.205 | 219 | 109 | 5 | 1 | 217 | 11 | 220 | 1.09e-55 | 177 |
| Msa0932910 | AT3G05930.1 | 45.581 | 215 | 109 | 4 | 4 | 215 | 6 | 215 | 1.69e-54 | 174 |
| Msa0932910 | AT1G18980.1 | 46.330 | 218 | 103 | 6 | 7 | 217 | 10 | 220 | 1.25e-53 | 172 |
| Msa0932910 | AT5G26700.1 | 46.411 | 209 | 93 | 6 | 11 | 215 | 16 | 209 | 1.98e-52 | 168 |
| Msa0932910 | AT3G62020.2 | 48.333 | 180 | 88 | 3 | 39 | 215 | 9 | 186 | 2.03e-48 | 157 |
| Msa0932910 | AT1G10460.1 | 42.211 | 199 | 108 | 5 | 22 | 215 | 19 | 215 | 1.07e-47 | 156 |
| Msa0932910 | AT3G10080.1 | 41.872 | 203 | 106 | 5 | 19 | 215 | 23 | 219 | 1.73e-44 | 148 |
| Msa0932910 | AT3G10080.2 | 41.176 | 204 | 108 | 5 | 18 | 215 | 93 | 290 | 8.92e-44 | 149 |
| Msa0932910 | AT5G20630.1 | 41.361 | 191 | 102 | 4 | 1 | 189 | 1 | 183 | 2.14e-39 | 135 |
| Msa0932910 | AT5G61750.1 | 40.860 | 186 | 100 | 4 | 4 | 187 | 6 | 183 | 8.86e-37 | 128 |
| Msa0932910 | AT1G74820.1 | 38.384 | 198 | 114 | 4 | 20 | 215 | 34 | 225 | 3.69e-36 | 127 |
| Msa0932910 | AT1G72610.1 | 37.566 | 189 | 110 | 4 | 26 | 212 | 19 | 201 | 1.24e-31 | 115 |
| Msa0932910 | AT5G38950.1 | 64.062 | 64 | 23 | 0 | 144 | 207 | 2 | 65 | 2.56e-20 | 82.8 |
Find 47 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATTGCTAATGCTGTATT+TGG | 0.057045 | 6_3:+1327779 | Msa0932910:CDS |
| TAGTGATTACACCTGGATTT+TGG | 0.253401 | 6_3:-1327760 | None:intergenic |
| TTCACTTTCAATTGAATGTT+GGG | 0.325573 | 6_3:+1327702 | Msa0932910:CDS |
| ATACTAGGACTAAACACTTT+AGG | 0.375557 | 6_3:+1327488 | Msa0932910:CDS |
| TTGGAGGGTACTCTTTATGT+TGG | 0.391607 | 6_3:+1327596 | Msa0932910:CDS |
| TCGTTTGTTGTAGCAAGCTT+TGG | 0.393528 | 6_3:-1327389 | None:intergenic |
| GATGTCTTTGTGTTTCCAAT+TGG | 0.393557 | 6_3:+1327674 | Msa0932910:CDS |
| GGAAATGCAGTTGTCATTGC+TGG | 0.408325 | 6_3:+1327728 | Msa0932910:CDS |
| AGTATCTCATTAACTGTAAC+CGG | 0.413639 | 6_3:-1327470 | None:intergenic |
| CCACTATGTTATTGTCCACT+TGG | 0.415021 | 6_3:-1327844 | None:intergenic |
| TGAAAGTGAATGAGGCCAAT+TGG | 0.419001 | 6_3:-1327689 | None:intergenic |
| TGGAGGGTACTCTTTATGTT+GGG | 0.430272 | 6_3:+1327597 | Msa0932910:CDS |
| ATTCACTTTCAATTGAATGT+TGG | 0.434824 | 6_3:+1327701 | Msa0932910:CDS |
| TTTCAATTGAATGTTGGGTA+TGG | 0.435827 | 6_3:+1327707 | Msa0932910:CDS |
| TTTCACAGCCTTCTTAGCAT+TGG | 0.455174 | 6_3:+1327086 | Msa0932910:CDS |
| CTATTGCTAATGCTGTATTT+GGG | 0.459960 | 6_3:+1327780 | Msa0932910:CDS |
| ATTGTCCACTTGGAAAGCTT+TGG | 0.467417 | 6_3:-1327834 | None:intergenic |
| ATAAGAATCTCAGTGGCTCT+AGG | 0.470121 | 6_3:-1327569 | None:intergenic |
| CAAAAGTCTTGTAGAGGGCT+AGG | 0.473790 | 6_3:-1327132 | None:intergenic |
| TTCTTCTACTCAGTGAAAGA+AGG | 0.477471 | 6_3:+1327413 | Msa0932910:CDS |
| TGAGATTCTTATCGTGTTGG+AGG | 0.479548 | 6_3:+1327580 | Msa0932910:CDS |
| TCGCATTGACTTCGCTGCTA+GGG | 0.481033 | 6_3:+1327523 | Msa0932910:CDS |
| AGTATACATACCACCGGTCT+TGG | 0.500629 | 6_3:-1327172 | None:intergenic |
| CTCGCATTGACTTCGCTGCT+AGG | 0.500918 | 6_3:+1327522 | Msa0932910:CDS |
| ACAAGATGCCAATGCTAAGA+AGG | 0.503312 | 6_3:-1327094 | None:intergenic |
| CACTGAGATTCTTATCGTGT+TGG | 0.542092 | 6_3:+1327577 | Msa0932910:CDS |
| GTGGCTCTAGGGTGAGTATG+TGG | 0.548107 | 6_3:-1327557 | None:intergenic |
| TAAGAATCTCAGTGGCTCTA+GGG | 0.548530 | 6_3:-1327568 | None:intergenic |
| CGCATTGACTTCGCTGCTAG+GGG | 0.548623 | 6_3:+1327524 | Msa0932910:CDS |
| GGACTTAGCAGCCAAAATCC+AGG | 0.549743 | 6_3:+1327749 | Msa0932910:CDS |
| CATTCAATTGAAAGTGAATG+AGG | 0.551568 | 6_3:-1327697 | None:intergenic |
| GTTACAGTTAATGAGATACT+AGG | 0.558743 | 6_3:+1327473 | Msa0932910:CDS |
| TGTGAATGGCAAATTCTGCA+AGG | 0.584711 | 6_3:+1327364 | Msa0932910:CDS |
| GCAATCAATGACACCAAGAC+CGG | 0.602384 | 6_3:+1327159 | Msa0932910:CDS |
| GCCACACAAAAGTCTTGTAG+AGG | 0.609133 | 6_3:-1327138 | None:intergenic |
| GAGATTCTTATCGTGTTGGA+GGG | 0.612927 | 6_3:+1327581 | Msa0932910:CDS |
| CCAAGTGGACAATAACATAG+TGG | 0.613774 | 6_3:+1327844 | Msa0932910:CDS |
| TTAGCAATAGTGATTACACC+TGG | 0.624375 | 6_3:-1327767 | None:intergenic |
| GGAAATACATCAAATCCACT+TGG | 0.640192 | 6_3:+1327434 | Msa0932910:CDS |
| ATCACAAAAGTACTCAACAA+AGG | 0.644517 | 6_3:+1327650 | Msa0932910:CDS |
| CCACACAAAAGTCTTGTAGA+GGG | 0.655758 | 6_3:-1327137 | None:intergenic |
| ATCAATGACACCAAGACCGG+TGG | 0.659585 | 6_3:+1327162 | Msa0932910:CDS |
| AGGGCTAGGATCAAATGCAA+AGG | 0.662548 | 6_3:-1327118 | None:intergenic |
| TCTCACCAAAGCTTTCCAAG+TGG | 0.665947 | 6_3:+1327829 | Msa0932910:CDS |
| ACTTGGTTCAAAAGTGACAC+CGG | 0.669513 | 6_3:+1327451 | Msa0932910:CDS |
| GCTCTAGGGTGAGTATGTGG+AGG | 0.673911 | 6_3:-1327554 | None:intergenic |
| CAACACGATAAGAATCTCAG+TGG | 0.757588 | 6_3:-1327576 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTATTTTGACTCGTT+TGG | + | chr6_3:1327211-1327230 | Msa0932910:intron | 20.0% |
| !!! | TTTATTTATTTTGACTCGTT+TGG | + | chr6_3:1327211-1327230 | Msa0932910:intron | 20.0% |
| !! | TTAAAAAGTATACATACCAC+CGG | - | chr6_3:1327181-1327200 | None:intergenic | 25.0% |
| !! | CTTTTGTATCATAGTTCAAT+TGG | - | chr6_3:1327250-1327269 | None:intergenic | 25.0% |
| ! | ACTATGATACAAAAGTTTCA+CGG | + | chr6_3:1327255-1327274 | Msa0932910:intron | 25.0% |
| ! | ATTCACTTTCAATTGAATGT+TGG | + | chr6_3:1327701-1327720 | Msa0932910:CDS | 25.0% |
| ! | TTCACTTTCAATTGAATGTT+GGG | + | chr6_3:1327702-1327721 | Msa0932910:CDS | 25.0% |
| !!! | AGAACTTCTGAAGAAATTTT+TGG | - | chr6_3:1327812-1327831 | None:intergenic | 25.0% |
| ! | ACAATCTTCAAAAACAATTC+TGG | + | chr6_3:1327867-1327886 | Msa0932910:CDS | 25.0% |
| ! | CAATCTTCAAAAACAATTCT+GGG | + | chr6_3:1327868-1327887 | Msa0932910:CDS | 25.0% |
| !! | TTAAAAAGTATACATACCAC+CGG | - | chr6_3:1327181-1327200 | None:intergenic | 25.0% |
| !! | CTTTTGTATCATAGTTCAAT+TGG | - | chr6_3:1327250-1327269 | None:intergenic | 25.0% |
| ! | ACTATGATACAAAAGTTTCA+CGG | + | chr6_3:1327255-1327274 | Msa0932910:intron | 25.0% |
| ! | ATTCACTTTCAATTGAATGT+TGG | + | chr6_3:1327701-1327720 | Msa0932910:CDS | 25.0% |
| ! | TTCACTTTCAATTGAATGTT+GGG | + | chr6_3:1327702-1327721 | Msa0932910:CDS | 25.0% |
| !!! | AGAACTTCTGAAGAAATTTT+TGG | - | chr6_3:1327812-1327831 | None:intergenic | 25.0% |
| ! | ACAATCTTCAAAAACAATTC+TGG | + | chr6_3:1327867-1327886 | Msa0932910:CDS | 25.0% |
| ! | CAATCTTCAAAAACAATTCT+GGG | + | chr6_3:1327868-1327887 | Msa0932910:CDS | 25.0% |
| CTATGATACAAAAGTTTCAC+GGG | + | chr6_3:1327256-1327275 | Msa0932910:intron | 30.0% | |
| ! | TGTTTTGCAGTTTTTGTGAA+TGG | + | chr6_3:1327350-1327369 | Msa0932910:intron | 30.0% |
| AGTATCTCATTAACTGTAAC+CGG | - | chr6_3:1327473-1327492 | None:intergenic | 30.0% | |
| GTTACAGTTAATGAGATACT+AGG | + | chr6_3:1327473-1327492 | Msa0932910:CDS | 30.0% | |
| ATACTAGGACTAAACACTTT+AGG | + | chr6_3:1327488-1327507 | Msa0932910:CDS | 30.0% | |
| !! | ATCACAAAAGTACTCAACAA+AGG | + | chr6_3:1327650-1327669 | Msa0932910:CDS | 30.0% |
| CATTCAATTGAAAGTGAATG+AGG | - | chr6_3:1327700-1327719 | None:intergenic | 30.0% | |
| TTTCAATTGAATGTTGGGTA+TGG | + | chr6_3:1327707-1327726 | Msa0932910:CDS | 30.0% | |
| ACTATTGCTAATGCTGTATT+TGG | + | chr6_3:1327779-1327798 | Msa0932910:CDS | 30.0% | |
| CTATTGCTAATGCTGTATTT+GGG | + | chr6_3:1327780-1327799 | Msa0932910:CDS | 30.0% | |
| CTATGATACAAAAGTTTCAC+GGG | + | chr6_3:1327256-1327275 | Msa0932910:intron | 30.0% | |
| ! | TGTTTTGCAGTTTTTGTGAA+TGG | + | chr6_3:1327350-1327369 | Msa0932910:intron | 30.0% |
| AGTATCTCATTAACTGTAAC+CGG | - | chr6_3:1327473-1327492 | None:intergenic | 30.0% | |
| GTTACAGTTAATGAGATACT+AGG | + | chr6_3:1327473-1327492 | Msa0932910:CDS | 30.0% | |
| ATACTAGGACTAAACACTTT+AGG | + | chr6_3:1327488-1327507 | Msa0932910:CDS | 30.0% | |
| !! | ATCACAAAAGTACTCAACAA+AGG | + | chr6_3:1327650-1327669 | Msa0932910:CDS | 30.0% |
| CATTCAATTGAAAGTGAATG+AGG | - | chr6_3:1327700-1327719 | None:intergenic | 30.0% | |
| TTTCAATTGAATGTTGGGTA+TGG | + | chr6_3:1327707-1327726 | Msa0932910:CDS | 30.0% | |
| ACTATTGCTAATGCTGTATT+TGG | + | chr6_3:1327779-1327798 | Msa0932910:CDS | 30.0% | |
| CTATTGCTAATGCTGTATTT+GGG | + | chr6_3:1327780-1327799 | Msa0932910:CDS | 30.0% | |
| TTCTTCTACTCAGTGAAAGA+AGG | + | chr6_3:1327413-1327432 | Msa0932910:CDS | 35.0% | |
| GGAAATACATCAAATCCACT+TGG | + | chr6_3:1327434-1327453 | Msa0932910:CDS | 35.0% | |
| ! | TGAGTACTTTTGTGATGAGA+CGG | - | chr6_3:1327646-1327665 | None:intergenic | 35.0% |
| GATGTCTTTGTGTTTCCAAT+TGG | + | chr6_3:1327674-1327693 | Msa0932910:CDS | 35.0% | |
| ! | TAGTGATTACACCTGGATTT+TGG | - | chr6_3:1327763-1327782 | None:intergenic | 35.0% |
| TTAGCAATAGTGATTACACC+TGG | - | chr6_3:1327770-1327789 | None:intergenic | 35.0% | |
| TCTTCAAAAACAATTCTGGG+TGG | + | chr6_3:1327871-1327890 | Msa0932910:CDS | 35.0% | |
| TTCTTCTACTCAGTGAAAGA+AGG | + | chr6_3:1327413-1327432 | Msa0932910:CDS | 35.0% | |
| GGAAATACATCAAATCCACT+TGG | + | chr6_3:1327434-1327453 | Msa0932910:CDS | 35.0% | |
| ! | TGAGTACTTTTGTGATGAGA+CGG | - | chr6_3:1327646-1327665 | None:intergenic | 35.0% |
| GATGTCTTTGTGTTTCCAAT+TGG | + | chr6_3:1327674-1327693 | Msa0932910:CDS | 35.0% | |
| ! | TAGTGATTACACCTGGATTT+TGG | - | chr6_3:1327763-1327782 | None:intergenic | 35.0% |
| TTAGCAATAGTGATTACACC+TGG | - | chr6_3:1327770-1327789 | None:intergenic | 35.0% | |
| TCTTCAAAAACAATTCTGGG+TGG | + | chr6_3:1327871-1327890 | Msa0932910:CDS | 35.0% | |
| TTTCACAGCCTTCTTAGCAT+TGG | + | chr6_3:1327086-1327105 | Msa0932910:CDS | 40.0% | |
| ACAAGATGCCAATGCTAAGA+AGG | - | chr6_3:1327097-1327116 | None:intergenic | 40.0% | |
| ! | CCACACAAAAGTCTTGTAGA+GGG | - | chr6_3:1327140-1327159 | None:intergenic | 40.0% |
| TGTGAATGGCAAATTCTGCA+AGG | + | chr6_3:1327364-1327383 | Msa0932910:CDS | 40.0% | |
| !! | TCGTTTGTTGTAGCAAGCTT+TGG | - | chr6_3:1327392-1327411 | None:intergenic | 40.0% |
| ACTTGGTTCAAAAGTGACAC+CGG | + | chr6_3:1327451-1327470 | Msa0932910:CDS | 40.0% | |
| ! | TAAGAATCTCAGTGGCTCTA+GGG | - | chr6_3:1327571-1327590 | None:intergenic | 40.0% |
| ATAAGAATCTCAGTGGCTCT+AGG | - | chr6_3:1327572-1327591 | None:intergenic | 40.0% | |
| CAACACGATAAGAATCTCAG+TGG | - | chr6_3:1327579-1327598 | None:intergenic | 40.0% | |
| CACTGAGATTCTTATCGTGT+TGG | + | chr6_3:1327577-1327596 | Msa0932910:CDS | 40.0% | |
| TGAGATTCTTATCGTGTTGG+AGG | + | chr6_3:1327580-1327599 | Msa0932910:CDS | 40.0% | |
| GAGATTCTTATCGTGTTGGA+GGG | + | chr6_3:1327581-1327600 | Msa0932910:CDS | 40.0% | |
| !! | TTGGAGGGTACTCTTTATGT+TGG | + | chr6_3:1327596-1327615 | Msa0932910:CDS | 40.0% |
| !! | TGGAGGGTACTCTTTATGTT+GGG | + | chr6_3:1327597-1327616 | Msa0932910:CDS | 40.0% |
| ! | TTTGTGATGAGACGGTTTTC+TGG | - | chr6_3:1327638-1327657 | None:intergenic | 40.0% |
| TGAAAGTGAATGAGGCCAAT+TGG | - | chr6_3:1327692-1327711 | None:intergenic | 40.0% | |
| ATTGTCCACTTGGAAAGCTT+TGG | - | chr6_3:1327837-1327856 | None:intergenic | 40.0% | |
| CCACTATGTTATTGTCCACT+TGG | - | chr6_3:1327847-1327866 | None:intergenic | 40.0% | |
| CCAAGTGGACAATAACATAG+TGG | + | chr6_3:1327844-1327863 | Msa0932910:CDS | 40.0% | |
| TTTCACAGCCTTCTTAGCAT+TGG | + | chr6_3:1327086-1327105 | Msa0932910:CDS | 40.0% | |
| ACAAGATGCCAATGCTAAGA+AGG | - | chr6_3:1327097-1327116 | None:intergenic | 40.0% | |
| ! | CCACACAAAAGTCTTGTAGA+GGG | - | chr6_3:1327140-1327159 | None:intergenic | 40.0% |
| TGTGAATGGCAAATTCTGCA+AGG | + | chr6_3:1327364-1327383 | Msa0932910:CDS | 40.0% | |
| !! | TCGTTTGTTGTAGCAAGCTT+TGG | - | chr6_3:1327392-1327411 | None:intergenic | 40.0% |
| ACTTGGTTCAAAAGTGACAC+CGG | + | chr6_3:1327451-1327470 | Msa0932910:CDS | 40.0% | |
| ! | TAAGAATCTCAGTGGCTCTA+GGG | - | chr6_3:1327571-1327590 | None:intergenic | 40.0% |
| ATAAGAATCTCAGTGGCTCT+AGG | - | chr6_3:1327572-1327591 | None:intergenic | 40.0% | |
| CAACACGATAAGAATCTCAG+TGG | - | chr6_3:1327579-1327598 | None:intergenic | 40.0% | |
| CACTGAGATTCTTATCGTGT+TGG | + | chr6_3:1327577-1327596 | Msa0932910:CDS | 40.0% | |
| TGAGATTCTTATCGTGTTGG+AGG | + | chr6_3:1327580-1327599 | Msa0932910:CDS | 40.0% | |
| GAGATTCTTATCGTGTTGGA+GGG | + | chr6_3:1327581-1327600 | Msa0932910:CDS | 40.0% | |
| !! | TTGGAGGGTACTCTTTATGT+TGG | + | chr6_3:1327596-1327615 | Msa0932910:CDS | 40.0% |
| !! | TGGAGGGTACTCTTTATGTT+GGG | + | chr6_3:1327597-1327616 | Msa0932910:CDS | 40.0% |
| ! | TTTGTGATGAGACGGTTTTC+TGG | - | chr6_3:1327638-1327657 | None:intergenic | 40.0% |
| TGAAAGTGAATGAGGCCAAT+TGG | - | chr6_3:1327692-1327711 | None:intergenic | 40.0% | |
| ATTGTCCACTTGGAAAGCTT+TGG | - | chr6_3:1327837-1327856 | None:intergenic | 40.0% | |
| CCACTATGTTATTGTCCACT+TGG | - | chr6_3:1327847-1327866 | None:intergenic | 40.0% | |
| CCAAGTGGACAATAACATAG+TGG | + | chr6_3:1327844-1327863 | Msa0932910:CDS | 40.0% | |
| AGGGCTAGGATCAAATGCAA+AGG | - | chr6_3:1327121-1327140 | None:intergenic | 45.0% | |
| ! | CAAAAGTCTTGTAGAGGGCT+AGG | - | chr6_3:1327135-1327154 | None:intergenic | 45.0% |
| ! | CCCTCTACAAGACTTTTGTG+TGG | + | chr6_3:1327137-1327156 | Msa0932910:CDS | 45.0% |
| ! | GCCACACAAAAGTCTTGTAG+AGG | - | chr6_3:1327141-1327160 | None:intergenic | 45.0% |
| GCAATCAATGACACCAAGAC+CGG | + | chr6_3:1327159-1327178 | Msa0932910:CDS | 45.0% | |
| AGTATACATACCACCGGTCT+TGG | - | chr6_3:1327175-1327194 | None:intergenic | 45.0% | |
| !!! | GGTGTCACTTTTGAACCAAG+TGG | - | chr6_3:1327452-1327471 | None:intergenic | 45.0% |
| GGAAATGCAGTTGTCATTGC+TGG | + | chr6_3:1327728-1327747 | Msa0932910:CDS | 45.0% | |
| TCTCACCAAAGCTTTCCAAG+TGG | + | chr6_3:1327829-1327848 | Msa0932910:CDS | 45.0% | |
| AGGGCTAGGATCAAATGCAA+AGG | - | chr6_3:1327121-1327140 | None:intergenic | 45.0% | |
| ! | CAAAAGTCTTGTAGAGGGCT+AGG | - | chr6_3:1327135-1327154 | None:intergenic | 45.0% |
| ! | CCCTCTACAAGACTTTTGTG+TGG | + | chr6_3:1327137-1327156 | Msa0932910:CDS | 45.0% |
| ! | GCCACACAAAAGTCTTGTAG+AGG | - | chr6_3:1327141-1327160 | None:intergenic | 45.0% |
| GCAATCAATGACACCAAGAC+CGG | + | chr6_3:1327159-1327178 | Msa0932910:CDS | 45.0% | |
| AGTATACATACCACCGGTCT+TGG | - | chr6_3:1327175-1327194 | None:intergenic | 45.0% | |
| !!! | GGTGTCACTTTTGAACCAAG+TGG | - | chr6_3:1327452-1327471 | None:intergenic | 45.0% |
| GGAAATGCAGTTGTCATTGC+TGG | + | chr6_3:1327728-1327747 | Msa0932910:CDS | 45.0% | |
| TCTCACCAAAGCTTTCCAAG+TGG | + | chr6_3:1327829-1327848 | Msa0932910:CDS | 45.0% | |
| ATCAATGACACCAAGACCGG+TGG | + | chr6_3:1327162-1327181 | Msa0932910:CDS | 50.0% | |
| !! | TCGCATTGACTTCGCTGCTA+GGG | + | chr6_3:1327523-1327542 | Msa0932910:CDS | 50.0% |
| GGACTTAGCAGCCAAAATCC+AGG | + | chr6_3:1327749-1327768 | Msa0932910:CDS | 50.0% | |
| ATCAATGACACCAAGACCGG+TGG | + | chr6_3:1327162-1327181 | Msa0932910:CDS | 50.0% | |
| !! | TCGCATTGACTTCGCTGCTA+GGG | + | chr6_3:1327523-1327542 | Msa0932910:CDS | 50.0% |
| GGACTTAGCAGCCAAAATCC+AGG | + | chr6_3:1327749-1327768 | Msa0932910:CDS | 50.0% | |
| !! | CTCGCATTGACTTCGCTGCT+AGG | + | chr6_3:1327522-1327541 | Msa0932910:CDS | 55.0% |
| !! | CGCATTGACTTCGCTGCTAG+GGG | + | chr6_3:1327524-1327543 | Msa0932910:CDS | 55.0% |
| !! | GCTCTAGGGTGAGTATGTGG+AGG | - | chr6_3:1327557-1327576 | None:intergenic | 55.0% |
| !! | GTGGCTCTAGGGTGAGTATG+TGG | - | chr6_3:1327560-1327579 | None:intergenic | 55.0% |
| !! | CTCGCATTGACTTCGCTGCT+AGG | + | chr6_3:1327522-1327541 | Msa0932910:CDS | 55.0% |
| !! | CGCATTGACTTCGCTGCTAG+GGG | + | chr6_3:1327524-1327543 | Msa0932910:CDS | 55.0% |
| !! | GCTCTAGGGTGAGTATGTGG+AGG | - | chr6_3:1327557-1327576 | None:intergenic | 55.0% |
| !! | GTGGCTCTAGGGTGAGTATG+TGG | - | chr6_3:1327560-1327579 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 1327066 | 1327904 | 1327066 | ID=Msa0932910;Name=Msa0932910 |
| chr6_3 | mRNA | 1327066 | 1327904 | 1327066 | ID=Msa0932910-mRNA-1;Parent=Msa0932910;Name=Msa0932910-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|220 |
| chr6_3 | exon | 1327066 | 1327183 | 1327066 | ID=Msa0932910-mRNA-1:exon:477;Parent=Msa0932910-mRNA-1 |
| chr6_3 | exon | 1327360 | 1327904 | 1327360 | ID=Msa0932910-mRNA-1:exon:478;Parent=Msa0932910-mRNA-1 |
| chr6_3 | CDS | 1327066 | 1327183 | 1327066 | ID=Msa0932910-mRNA-1:cds;Parent=Msa0932910-mRNA-1 |
| chr6_3 | CDS | 1327360 | 1327904 | 1327360 | ID=Msa0932910-mRNA-1:cds;Parent=Msa0932910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
