AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0702830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0702830 MtrunA17_Chr8g0380791 96.871 767 23 1 1 766 1 767 0.0 1540
Msa0702830 MtrunA17_Chr1g0180261 50.769 780 355 6 6 763 44 816 0.0 765
Msa0702830 MtrunA17_Chr1g0171491 38.295 786 396 14 9 759 57 788 2.02e-180 536
Msa0702830 MtrunA17_Chr1g0171491 37.815 119 74 0 76 194 55 173 3.50e-18 89.4
Msa0702830 MtrunA17_Chr3g0115111 38.846 780 367 19 1 764 45 730 1.97e-171 511
Msa0702830 MtrunA17_Chr7g0256301 39.272 769 398 16 8 757 66 784 7.42e-170 509
Msa0702830 MtrunA17_Chr8g0353121 38.896 779 390 16 2 764 41 749 3.35e-169 506
Msa0702830 MtrunA17_Chr5g0424301 37.077 739 369 19 47 759 59 727 5.24e-142 435
Msa0702830 MtrunA17_Chr5g0424301 46.429 168 90 0 9 176 65 232 7.48e-48 181
Msa0702830 MtrunA17_Chr3g0131001 37.604 718 367 15 59 764 55 703 1.67e-137 422
Msa0702830 MtrunA17_Chr3g0131001 43.500 200 113 0 9 208 51 250 6.47e-44 169
Msa0702830 MtrunA17_Chr3g0131001 41.176 85 50 0 7 91 141 225 2.72e-13 73.6
Msa0702830 MtrunA17_Chr8g0385201 44.118 442 190 8 327 764 277 665 2.22e-116 366
Msa0702830 MtrunA17_Chr8g0385201 44.970 169 92 1 6 173 23 191 3.20e-43 166
Msa0702830 MtrunA17_Chr8g0385201 37.956 137 84 1 59 194 30 166 1.50e-19 93.6
Msa0702830 MtrunA17_Chr3g0082501 45.047 424 187 8 341 757 369 753 4.32e-110 352
Msa0702830 MtrunA17_Chr3g0082501 49.239 197 100 0 9 205 60 256 6.73e-60 216
Msa0702830 MtrunA17_Chr8g0382971 41.209 364 146 8 6 337 18 345 5.76e-66 223
Msa0702830 MtrunA17_Chr8g0377671 54.167 192 88 0 1 192 8 199 9.19e-63 212
Msa0702830 MtrunA17_Chr8g0377671 40.252 159 95 0 12 170 111 269 3.59e-30 120
Msa0702830 MtrunA17_Chr8g0385241 34.670 424 178 5 5 334 2 420 1.76e-57 202
Msa0702830 MtrunA17_Chr8g0377191 53.226 186 87 0 7 192 6 191 4.92e-57 193
Msa0702830 MtrunA17_Chr8g0377191 36.434 129 58 2 102 206 9 137 6.84e-13 68.6
Msa0702830 MtrunA17_Chr4g0059911 53.723 188 86 1 7 193 3 190 3.36e-56 197
Msa0702830 MtrunA17_Chr4g0059911 37.931 145 90 0 15 159 104 248 6.05e-21 95.5
Msa0702830 MtrunA17_Chr8g0377221 43.077 260 102 6 12 231 4 257 4.05e-52 182
Msa0702830 MtrunA17_Chr8g0383551 34.933 375 151 11 13 337 28 359 3.74e-48 174
Msa0702830 MtrunA17_Chr2g0316611 47.179 195 102 1 6 199 29 223 6.20e-44 162
Msa0702830 MtrunA17_Chr2g0316611 46.316 190 101 1 11 199 172 361 1.05e-40 153
Msa0702830 MtrunA17_Chr2g0316611 42.021 188 108 1 13 199 105 292 6.19e-37 142
Msa0702830 MtrunA17_Chr2g0316611 53.543 127 59 0 13 139 243 369 1.01e-34 136
Msa0702830 MtrunA17_Chr2g0316611 56.410 78 26 1 5 74 296 373 6.56e-18 86.7
Msa0702830 MtrunA17_Chr2g0316631 39.167 240 99 2 6 198 29 268 7.56e-43 157
Msa0702830 MtrunA17_Chr2g0316631 43.085 188 106 1 13 199 105 292 5.26e-39 147
Msa0702830 MtrunA17_Chr2g0316631 43.902 123 69 0 13 135 174 296 4.47e-26 109
Msa0702830 MtrunA17_Chr2g0316631 64.062 64 23 0 11 74 241 304 1.35e-19 90.5
Msa0702830 MtrunA17_Chr6g0467061 45.078 193 105 1 6 197 12 204 4.40e-42 156
Msa0702830 MtrunA17_Chr6g0467061 45.455 187 101 1 13 198 88 274 6.05e-39 147
Msa0702830 MtrunA17_Chr6g0467061 43.575 179 101 0 13 191 157 335 2.42e-33 131
Msa0702830 MtrunA17_Chr8g0377211 45.294 170 69 2 1 170 8 153 4.50e-40 145
Msa0702830 MtrunA17_Chr8g0377211 52.252 111 52 1 82 192 20 129 1.07e-28 112
Msa0702830 MtrunA17_Chr5g0398011 54.955 111 50 0 14 124 36 146 6.55e-32 121
Msa0702830 MtrunA17_Chr5g0398011 33.333 114 76 0 56 169 32 145 2.46e-14 71.2
Msa0702830 MtrunA17_Chr5g0398011 63.830 47 17 0 13 59 104 150 2.90e-14 70.9
Msa0702830 MtrunA17_Chr7g0233351 36.170 188 117 1 12 196 191 378 7.78e-31 126
Msa0702830 MtrunA17_Chr7g0233351 34.266 143 91 1 4 143 226 368 4.88e-19 90.9
Msa0702830 MtrunA17_Chr7g0233351 41.304 92 54 0 102 193 189 280 1.79e-14 76.6
Msa0702830 MtrunA17_Chr7g0233351 25.000 228 146 3 51 253 184 411 3.91e-14 75.5
Msa0702830 MtrunA17_Chr4g0055371 35.955 178 114 0 12 189 171 348 7.18e-29 120
Msa0702830 MtrunA17_Chr4g0055371 35.036 137 89 0 7 143 212 348 8.25e-19 89.7
Msa0702830 MtrunA17_Chr4g0055371 39.474 114 69 0 82 195 172 285 3.70e-14 75.5
Msa0702830 MtrunA17_Chr3g0114791 34.857 175 114 0 12 186 184 358 7.70e-29 120
Msa0702830 MtrunA17_Chr3g0114791 35.965 114 73 0 82 195 185 298 1.38e-12 70.5
Msa0702830 MtrunA17_Chr3g0114791 39.785 93 56 0 100 192 180 272 3.58e-12 69.3
Msa0702830 MtrunA17_Chr8g0383331 44.094 127 71 0 56 182 1 127 1.13e-28 112
Msa0702830 MtrunA17_Chr8g0383331 36.913 149 94 0 11 159 2 150 1.49e-23 98.2
Msa0702830 MtrunA17_Chr8g0383331 41.111 90 30 1 126 192 2 91 2.58e-13 68.6
Msa0702830 MtrunA17_Chr5g0424111 36.313 179 114 0 8 186 192 370 4.85e-28 118
Msa0702830 MtrunA17_Chr5g0424111 36.090 133 85 0 10 142 240 372 9.99e-17 83.6
Msa0702830 MtrunA17_Chr5g0424111 37.719 114 71 0 82 195 197 310 1.25e-12 70.9
Msa0702830 MtrunA17_Chr5g0398021 48.649 111 55 1 4 112 2 112 1.07e-27 109
Msa0702830 MtrunA17_Chr5g0398021 37.624 101 63 0 71 171 2 102 1.63e-14 71.6
Msa0702830 MtrunA17_Chr5g0398021 34.694 98 64 0 61 158 15 112 1.26e-12 66.2
Msa0702830 MtrunA17_Chr5g0398021 31.373 102 70 0 93 194 1 102 7.03e-11 61.2
Msa0702830 MtrunA17_Chr8g0336161 33.146 178 119 0 12 189 196 373 6.46e-25 108
Msa0702830 MtrunA17_Chr8g0336161 34.307 137 90 0 7 143 237 373 2.86e-18 88.6
Msa0702830 MtrunA17_Chr8g0336161 43.478 92 52 0 102 193 194 285 8.29e-15 77.8
Msa0702830 MtrunA17_Chr1g0200881 30.488 246 144 12 409 638 1317 1551 6.47e-15 79.3
Msa0702830 MtrunA17_Chr4g0069951 31.217 189 110 7 437 611 1552 1734 1.32e-14 78.6
Msa0702830 MtrunA17_Chr8g0345151 30.688 189 111 7 437 611 1558 1740 1.76e-13 74.7
Msa0702830 MtrunA17_Chr8g0377201 59.184 49 19 1 12 60 26 73 1.53e-12 63.9
Msa0702830 MtrunA17_Chr8g0377201 59.574 47 19 0 148 194 1 47 1.25e-11 61.2
Msa0702830 MtrunA17_Chr3g0085921 54.902 51 23 0 142 192 1 51 6.73e-12 62.8
Msa0702830 MtrunA17_Chr1g0210831 29.134 127 90 0 61 187 615 741 6.81e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0702830 AT1G10900.2 64.032 759 263 5 6 764 4 752 0.0 987
Msa0702830 AT1G10900.1 64.032 759 263 5 6 764 4 752 0.0 987
Msa0702830 AT1G10900.3 64.032 759 263 5 6 764 4 752 0.0 987
Msa0702830 AT1G60890.1 61.935 775 268 7 6 764 4 767 0.0 971
Msa0702830 AT1G60890.2 62.047 772 266 7 9 764 19 779 0.0 970
Msa0702830 AT3G09920.3 49.871 774 365 12 6 764 46 811 0.0 739
Msa0702830 AT3G09920.4 49.871 774 365 12 6 764 46 811 0.0 739
Msa0702830 AT3G09920.2 49.871 774 365 12 6 764 46 811 0.0 739
Msa0702830 AT3G09920.1 49.871 774 365 12 6 764 46 811 0.0 739
Msa0702830 AT2G41210.1 40.808 767 372 15 9 759 66 766 0.0 558
Msa0702830 AT3G07960.1 40.051 779 356 14 9 764 23 713 0.0 556
Msa0702830 AT3G07960.1 36.975 119 75 0 76 194 21 139 4.60e-19 92.4
Msa0702830 AT3G56960.2 40.078 771 386 17 9 764 68 777 0.0 548
Msa0702830 AT3G56960.1 40.078 771 386 17 9 764 68 777 0.0 548
Msa0702830 AT1G77740.2 39.608 765 359 18 9 759 73 748 1.73e-168 504
Msa0702830 AT1G77740.1 39.608 765 359 18 9 759 73 748 1.73e-168 504
Msa0702830 AT3G07960.3 42.691 602 283 8 9 591 23 581 3.09e-164 489
Msa0702830 AT3G07960.3 36.975 119 75 0 76 194 21 139 7.68e-19 91.7
Msa0702830 AT3G07960.2 42.691 602 283 8 9 591 23 581 6.82e-164 487
Msa0702830 AT3G07960.2 36.975 119 75 0 76 194 21 139 1.01e-18 91.3
Msa0702830 AT3G07960.4 42.691 602 283 8 9 591 23 581 6.82e-164 487
Msa0702830 AT3G07960.4 36.975 119 75 0 76 194 21 139 1.01e-18 91.3
Msa0702830 AT1G21980.1 37.344 723 389 16 59 764 76 751 3.54e-149 454
Msa0702830 AT1G21980.1 48.023 177 92 0 9 185 72 248 4.56e-53 197
Msa0702830 AT2G26420.2 36.340 765 379 16 6 759 46 713 2.56e-146 446
Msa0702830 AT2G26420.3 36.340 765 379 16 6 759 46 713 2.56e-146 446
Msa0702830 AT2G26420.1 36.376 756 377 15 6 759 46 699 9.02e-143 436
Msa0702830 AT1G01460.1 34.180 433 239 10 365 764 3 422 1.92e-74 248
Msa0702830 AT4G01190.3 34.063 411 245 9 363 763 8 402 1.70e-69 234
Msa0702830 AT4G01190.2 34.063 411 245 9 363 763 8 402 1.70e-69 234
Msa0702830 AT4G01190.1 34.596 396 236 8 378 763 10 392 2.07e-69 234
Msa0702830 AT4G17080.1 34.270 178 117 0 10 187 254 431 5.19e-28 119
Msa0702830 AT4G17080.1 35.625 160 103 0 35 194 256 415 1.80e-22 102
Msa0702830 AT4G17080.1 32.836 134 90 0 10 143 300 433 5.34e-18 88.6
Msa0702830 AT4G17080.1 36.429 140 87 1 56 195 233 370 3.06e-15 79.7
Msa0702830 AT1G77660.1 35.429 175 113 0 12 186 177 351 1.02e-27 117
Msa0702830 AT1G77660.1 33.099 142 92 1 4 142 212 353 5.37e-16 81.6
Msa0702830 AT1G77660.1 35.088 114 74 0 82 195 178 291 2.54e-11 67.0
Msa0702830 AT2G35170.1 35.135 185 119 1 3 187 217 400 3.11e-27 116
Msa0702830 AT2G35170.1 26.667 225 156 2 56 276 201 420 7.86e-13 72.0
Msa0702830 AT1G21920.1 34.091 176 116 0 12 187 173 348 1.22e-26 114
Msa0702830 AT1G21920.1 32.824 131 88 0 10 140 217 347 8.36e-15 77.8
Msa0702830 AT1G21920.1 35.965 114 73 0 82 195 174 287 7.94e-12 68.6
Msa0702830 AT1G21920.2 34.091 176 116 0 12 187 173 348 2.23e-26 112
Msa0702830 AT1G21920.2 32.824 131 88 0 10 140 217 347 1.43e-14 76.6
Msa0702830 AT1G21920.2 35.965 114 73 0 82 195 174 287 1.03e-11 67.8
Msa0702830 AT1G34260.2 30.189 212 125 9 392 588 1180 1383 5.47e-17 86.7
Msa0702830 AT1G34260.1 30.189 212 125 9 392 588 1180 1383 5.47e-17 86.7
Msa0702830 AT1G34260.3 30.189 212 125 9 392 588 1180 1383 5.47e-17 86.7
Msa0702830 AT1G34260.4 30.189 212 125 9 392 588 940 1143 5.92e-17 86.3
Msa0702830 AT4G33240.2 31.390 223 130 9 380 588 1443 1656 2.72e-15 81.3
Msa0702830 AT4G33240.6 31.390 223 130 9 380 588 1444 1657 2.75e-15 81.3
Msa0702830 AT4G33240.1 31.390 223 130 9 380 588 1444 1657 2.75e-15 81.3
Msa0702830 AT4G33240.7 31.390 223 130 9 380 588 1444 1657 2.75e-15 81.3
Msa0702830 AT4G33240.4 31.390 223 130 9 380 588 1441 1654 2.77e-15 81.3
Msa0702830 AT4G33240.5 31.390 223 130 9 380 588 1404 1617 2.90e-15 80.9
Msa0702830 AT4G33240.3 31.390 223 130 9 380 588 1440 1653 2.92e-15 80.9
Msa0702830 AT1G71010.1 30.851 188 112 6 437 611 1414 1596 1.23e-13 75.9
Msa0702830 AT1G75010.1 30.709 127 88 0 61 187 604 730 2.26e-12 71.2
Msa0702830 AT1G75010.1 39.080 87 53 0 109 195 606 692 9.89e-11 65.9

Find 185 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACATGACACTTAATTATT+TGG 0.050932 4_4:+74653518 Msa0702830:three_prime_UTR
CAGAATATCACTAATTTATT+TGG 0.100499 4_4:-74648965 None:intergenic
CAGATGTTTACGAAGGTTTA+TGG 0.157602 4_4:+74649454 Msa0702830:CDS
CTACGGTTAAATCTTGAATT+TGG 0.182290 4_4:-74649792 None:intergenic
CCTACATGATGGTAGTATTT+AGG 0.206353 4_4:-74650979 None:intergenic
CATCAATTTCATGGATAAAA+AGG 0.210898 4_4:+74653254 Msa0702830:CDS
TTCTCTAGACTGCAAGTTCT+TGG 0.217156 4_4:+74652436 Msa0702830:CDS
TACAGACATCACGGTATTTC+CGG 0.243562 4_4:-74653282 None:intergenic
TTTGATGGTTGTTGGTTAAA+TGG 0.249491 4_4:+74649600 Msa0702830:CDS
TTTGAGAGAAATGTTCAAAT+TGG 0.275332 4_4:+74650666 Msa0702830:CDS
GAAGTTCGGTCGTCTGATTT+TGG 0.281272 4_4:+74650397 Msa0702830:CDS
CAAATCAATCATATACTAAA+TGG 0.293412 4_4:-74653485 None:intergenic
TCAGATGGAGGACTTTATAT+TGG 0.295938 4_4:+74649654 Msa0702830:CDS
GAAGTATCTATATTGGAAAT+TGG 0.296465 4_4:+74649523 Msa0702830:CDS
AATTCAAACAGCTCAATAAA+AGG 0.308780 4_4:+74653454 Msa0702830:three_prime_UTR
CACATGACACTTAATTATTT+GGG 0.310401 4_4:+74653519 Msa0702830:three_prime_UTR
AACACTGAGAGGTGGGAAAA+AGG 0.313597 4_4:+74651050 Msa0702830:CDS
ACTCTTATTACAAAATTCTT+CGG 0.317002 4_4:+74651015 Msa0702830:CDS
TGAACGTTTCATCAATTTCA+TGG 0.329150 4_4:+74653245 Msa0702830:CDS
GTAAAGAAGAGTTCAATTAT+AGG 0.329256 4_4:+74650116 Msa0702830:CDS
TATGAAGGGGATTGGATAGA+TGG 0.337976 4_4:+74649255 Msa0702830:CDS
CTCTTATTACAAAATTCTTC+GGG 0.342573 4_4:+74651016 Msa0702830:CDS
ATCTCAAAGTACTTCATTGT+TGG 0.345418 4_4:+74649866 Msa0702830:CDS
ATTATTGCCCTATGGTCTTC+AGG 0.349462 4_4:+74650506 Msa0702830:CDS
AATGATGGAAGTATCTATAT+TGG 0.350708 4_4:+74649516 Msa0702830:CDS
CTCAGATTGCCGGTGCAATT+AGG 0.361997 4_4:+74653009 Msa0702830:intron
AAAGGAACATTCTATCCTTC+TGG 0.363846 4_4:+74649705 Msa0702830:CDS
CTCAGATTGACCTTCATTAG+AGG 0.364250 4_4:-74649961 None:intergenic
GTTTAACCTTTCAAAAGAAA+TGG 0.366422 4_4:+74648924 Msa0702830:five_prime_UTR
GGTATCTGGTATGAGTAATA+TGG 0.375485 4_4:+74649983 Msa0702830:CDS
AAGTACGAGGGCGAATTCTC+CGG 0.383441 4_4:+74649321 Msa0702830:CDS
ATCGCATAATAAGAACAAAA+AGG 0.391301 4_4:+74650070 Msa0702830:CDS
TAATTTATTTGGATAACTTC+AGG 0.393216 4_4:-74648954 None:intergenic
GTACACAATCATTCATCCTT+TGG 0.396078 4_4:-74653356 None:intergenic
ATTCTCATTGCTATGAAGAT+TGG 0.396427 4_4:-74649760 None:intergenic
ATGTTTCAGATTGCTCTATC+AGG 0.403238 4_4:+74648841 Msa0702830:intron
ACCTTCGTAAACATCTGAAT+TGG 0.404965 4_4:-74649448 None:intergenic
CCCTCGTACTTTGCTCCTGA+TGG 0.405502 4_4:-74649309 None:intergenic
TTGGAGAAAGAGCTAGGATA+AGG 0.407652 4_4:+74650416 Msa0702830:CDS
ACGAACGCCTTTAGATTCTC+TGG 0.408227 4_4:-74652512 None:intergenic
GAAGGTCAATCTGAGGTATC+TGG 0.410812 4_4:+74649969 Msa0702830:CDS
CAGGGAAAGGGATACTTATA+TGG 0.412305 4_4:+74649286 Msa0702830:CDS
ACAGACATCACGGTATTTCC+GGG 0.414756 4_4:-74653281 None:intergenic
GGGAATAATAGATATACTTC+AGG 0.414956 4_4:+74653131 Msa0702830:CDS
ACGCCTGGACCTCACATTAG+AGG 0.416249 4_4:+74652795 Msa0702830:CDS
CGGTTCCTGCACGCGAAGTT+CGG 0.417255 4_4:+74650383 Msa0702830:CDS
AGCTTCGTCAACGCGACGCC+TGG 0.420191 4_4:+74652780 Msa0702830:CDS
TCTAAAATACGAATTTCATA+TGG 0.420253 4_4:+74651289 Msa0702830:CDS
AACAACCATCTCTAAAGAAA+TGG 0.425820 4_4:+74649733 Msa0702830:CDS
ATGAATGTTCCTCAGATTGC+CGG 0.428484 4_4:+74652999 Msa0702830:intron
TTAATTTGCAGCTTGGCATC+AGG 0.428757 4_4:+74650174 Msa0702830:CDS
GGGATTATGAAGTGGTTTAA+CGG 0.429532 4_4:+74649570 Msa0702830:CDS
TTAGGTGCGGTTTGTTGTCA+TGG 0.434098 4_4:+74651148 Msa0702830:intron
GATCGGTATATGAAGGGGAT+TGG 0.434561 4_4:+74649247 Msa0702830:CDS
TACGAAGGTTTATGGAAAGA+AGG 0.438135 4_4:+74649462 Msa0702830:CDS
GAAGAGAAGTCCTTTACAAA+TGG 0.438715 4_4:+74649156 Msa0702830:CDS
AATTGATTACAGTCTTCTGT+TGG 0.443015 4_4:+74652472 Msa0702830:CDS
GTATACTTCCCCACGGCAAC+GGG 0.447403 4_4:+74649205 Msa0702830:CDS
ACTGTTCTGTAGACTTCTAC+TGG 0.449316 4_4:+74650479 Msa0702830:CDS
GGAAAATTTACTTGGAATGA+TGG 0.451266 4_4:+74649501 Msa0702830:CDS
ATGAATGCTCATCACGGGAT+TGG 0.454271 4_4:+74649411 Msa0702830:CDS
CGACATATGCAATCGTCAGC+AGG 0.456001 4_4:-74649912 None:intergenic
CGAACTTCGCGTGCAGGAAC+CGG 0.457813 4_4:-74650382 None:intergenic
GATAATAGCTTCGGCGGTGT+TGG 0.458656 4_4:-74650145 None:intergenic
AAGGCGTTCGTCGAACCTCC+TGG 0.464255 4_4:+74652524 Msa0702830:CDS
ATCAAACTGCAGTGATTTGT+AGG 0.464399 4_4:-74653184 None:intergenic
GCAACTAACAACAAGCCTTT+CGG 0.464606 4_4:-74652747 None:intergenic
AAGGCAGCGGAAAATTTACT+TGG 0.465244 4_4:+74649493 Msa0702830:CDS
CTGAAGCTTAATTTGCAGCT+TGG 0.465574 4_4:+74650167 Msa0702830:CDS
ATTGATTACAGTCTTCTGTT+GGG 0.467533 4_4:+74652473 Msa0702830:CDS
GGGATACTTATATGGCCATC+AGG 0.475813 4_4:+74649294 Msa0702830:CDS
GAAAATAAGTATCCTGTGAC+AGG 0.476368 4_4:-74648141 None:intergenic
AGTACGAGGGCGAATTCTCC+GGG 0.479858 4_4:+74649322 Msa0702830:CDS
TAAGCTTCAGATAATAGCTT+CGG 0.480311 4_4:-74650154 None:intergenic
TAGAGCACAATCACCACAAA+TGG 0.481172 4_4:-74650710 None:intergenic
AAATACTCACCTTGCAGTAC+CGG 0.481918 4_4:-74652871 None:intergenic
TTTGTAATTAATTGTTCCAA+AGG 0.483454 4_4:+74653340 Msa0702830:three_prime_UTR
TGTCTACATTGGTAAATTCA+AGG 0.485501 4_4:+74649182 Msa0702830:CDS
TCTGTTACTGATATAGTCAT+AGG 0.486890 4_4:-74653207 None:intergenic
TCATAGCAATGAGAATTGTA+AGG 0.491080 4_4:+74649767 Msa0702830:CDS
CTGGAAAGATTATTGCCCTA+TGG 0.492808 4_4:+74650498 Msa0702830:CDS
AATGGACTTAGACAAGGATC+TGG 0.498528 4_4:+74649618 Msa0702830:CDS
CTAAAGGACATATCTTCAGC+TGG 0.501585 4_4:+74650730 Msa0702830:CDS
CACCTCTCAGTGTTATTCGA+TGG 0.502502 4_4:-74651041 None:intergenic
TTTCATAACTTCCTACATGA+TGG 0.502637 4_4:-74650990 None:intergenic
TATATTGGAACATGGAGTAA+AGG 0.502815 4_4:+74649669 Msa0702830:CDS
TTGTGGTGATTGTGCTCTAA+AGG 0.503067 4_4:+74650714 Msa0702830:CDS
TATAGTTTACCTTCTGCAGA+TGG 0.505853 4_4:+74652563 Msa0702830:CDS
TAGGTGCGGTTTGTTGTCAT+GGG 0.512383 4_4:+74651149 Msa0702830:intron
GGGAATTATCTTCACGGTCA+CGG 0.512896 4_4:+74649342 Msa0702830:CDS
TGTGTACTTCCCGTTGCCGT+GGG 0.513815 4_4:-74649214 None:intergenic
GAAGGAATTCGCGAAGGCAG+CGG 0.514143 4_4:+74649480 Msa0702830:CDS
TTATGATGTGGTACTCTACA+TGG 0.514200 4_4:+74653110 Msa0702830:CDS
GTACACCATTTCTTTAGAGA+TGG 0.515782 4_4:-74649738 None:intergenic
GGTCTGCGATAACGCGGATG+AGG 0.519666 4_4:-74649940 None:intergenic
GACGACCGAACTTCGCGTGC+AGG 0.520685 4_4:-74650388 None:intergenic
ATCAACTTCCTTGTTACCGA+TGG 0.520731 4_4:-74652838 None:intergenic
TTCCCTCTAATGTGAGGTCC+AGG 0.521447 4_4:-74652798 None:intergenic
ATGTGTACTTCCCGTTGCCG+TGG 0.523495 4_4:-74649215 None:intergenic
GATAAGGATGTACTTTCCTA+AGG 0.524503 4_4:+74650432 Msa0702830:CDS
AAAGGCCTAAAGGACGGAAA+AGG 0.524731 4_4:+74649687 Msa0702830:CDS
GGCGTCGCGTTGACGAAGCT+CGG 0.526121 4_4:-74652777 None:intergenic
GGTATACTTCCCCACGGCAA+CGG 0.526432 4_4:+74649204 Msa0702830:CDS
GTCAATTGTGAACCCTCCTT+AGG 0.529080 4_4:-74650448 None:intergenic
TTCTCCGGGAATTATCTTCA+CGG 0.530694 4_4:+74649336 Msa0702830:CDS
CACCAGATTTACTCAAACAA+GGG 0.531491 4_4:+74652709 Msa0702830:intron
CGCCTGGACCTCACATTAGA+GGG 0.534333 4_4:+74652796 Msa0702830:CDS
TACTGACGCTGTATTGCTCC+AGG 0.536520 4_4:-74652542 None:intergenic
AATGAATACCTGAAGACCAT+AGG 0.538150 4_4:-74650514 None:intergenic
TCAGATGGATCGGTATATGA+AGG 0.538278 4_4:+74649240 Msa0702830:CDS
TAGAGCTCCAGAGAATCTAA+AGG 0.546858 4_4:+74652505 Msa0702830:CDS
CCTAAATACTACCATCATGT+AGG 0.550012 4_4:+74650979 Msa0702830:CDS
GTCTACATTGGTAAATTCAA+GGG 0.551103 4_4:+74649183 Msa0702830:CDS
AAGGATGTACTTTCCTAAGG+AGG 0.552053 4_4:+74650435 Msa0702830:CDS
CCATCGTCGTTACGATCTGA+AGG 0.555421 4_4:+74651199 Msa0702830:CDS
TGGAGGATGAATGCTCATCA+CGG 0.558790 4_4:+74649405 Msa0702830:CDS
GTAGACATCACCATTTGTAA+AGG 0.559629 4_4:-74649166 None:intergenic
GTGACCGTGAAGATAATTCC+CGG 0.561940 4_4:-74649340 None:intergenic
ATGTTTACTCCTAATTGCAC+CGG 0.562596 4_4:-74653018 None:intergenic
ACAAATGGTGATGTCTACAT+TGG 0.565018 4_4:+74649171 Msa0702830:CDS
TAGTGATATTCTGCTAGTCA+TGG 0.565239 4_4:+74648975 Msa0702830:exon
ATGAATACCTGAAGACCATA+GGG 0.565904 4_4:-74650513 None:intergenic
GCACCAGATTTACTCAAACA+AGG 0.570043 4_4:+74652708 Msa0702830:intron
AGCATACTCCATCGGTAACA+AGG 0.571690 4_4:+74652830 Msa0702830:CDS
GTACACATGGTCAGATGGAT+CGG 0.577176 4_4:+74649230 Msa0702830:CDS
GATGGTTGTTTGCTACCAGA+AGG 0.578528 4_4:-74649720 None:intergenic
GGAGGATGAATGCTCATCAC+GGG 0.578586 4_4:+74649406 Msa0702830:CDS
CAGATGGATCGGTATATGAA+GGG 0.578591 4_4:+74649241 Msa0702830:CDS
TTATCGCAGACCTCTAATGA+AGG 0.580718 4_4:+74649951 Msa0702830:CDS
AACATGGAGTAAAGGCCTAA+AGG 0.583252 4_4:+74649677 Msa0702830:CDS
AACGGCTGTGTTTACACTGG+TGG 0.584384 4_4:+74649381 Msa0702830:CDS
AAAAGGGAAAATAGATGGAA+GGG 0.584921 4_4:+74649548 Msa0702830:CDS
CCTTCAGATCGTAACGACGA+TGG 0.585986 4_4:-74651199 None:intergenic
TTCGAAAGGGAATATATGCA+AGG 0.587505 4_4:+74650008 Msa0702830:CDS
AATACTCACCTTGCAGTACC+GGG 0.588020 4_4:-74652870 None:intergenic
GATCTGAAGGGATCTTCTCA+AGG 0.588048 4_4:+74651212 Msa0702830:CDS
TCCAATTCAGATGTTTACGA+AGG 0.595150 4_4:+74649447 Msa0702830:CDS
AAAGGGAAAATAGATGGAAG+GGG 0.596052 4_4:+74649549 Msa0702830:CDS
AGGATGTACTTTCCTAAGGA+GGG 0.596234 4_4:+74650436 Msa0702830:CDS
GGGAAGTACACATGGTCAGA+TGG 0.596249 4_4:+74649225 Msa0702830:CDS
ATCGAATAACACTGAGAGGT+GGG 0.596556 4_4:+74651043 Msa0702830:CDS
AGCAAACTAGTAGCTTGAGC+CGG 0.603192 4_4:-74653042 None:intergenic
GAGTACATGATGTCCATTTG+TGG 0.605960 4_4:+74650697 Msa0702830:CDS
ATTAGAGGTCTGCGATAACG+CGG 0.609836 4_4:-74649946 None:intergenic
TGGTTAAATGGACTTAGACA+AGG 0.611568 4_4:+74649612 Msa0702830:CDS
GACATATGCAATCGTCAGCA+GGG 0.613342 4_4:-74649911 None:intergenic
ACAAATGGACATCATGTACT+CGG 0.617112 4_4:-74650695 None:intergenic
CATCGAATAACACTGAGAGG+TGG 0.622054 4_4:+74651042 Msa0702830:CDS
TAGTTTGCTTCAAGAAGACA+AGG 0.625211 4_4:+74653056 Msa0702830:CDS
ATATACTAACCATCTGCAGA+AGG 0.625385 4_4:-74652572 None:intergenic
CTGCTAGTCATGGAGGACAA+TGG 0.627968 4_4:+74648985 Msa0702830:exon
ACCAGATTTACTCAAACAAG+GGG 0.629142 4_4:+74652710 Msa0702830:intron
TCAATTCTCAGGTACACTGT+AGG 0.629207 4_4:+74650349 Msa0702830:intron
GCTTCAGATAATAGCTTCGG+CGG 0.629314 4_4:-74650151 None:intergenic
CTCTAATGAAGGTCAATCTG+AGG 0.630043 4_4:+74649962 Msa0702830:CDS
TAGTCATGGAGGACAATGGA+AGG 0.633428 4_4:+74648989 Msa0702830:exon
AAGGGAAAATAGATGGAAGG+GGG 0.634233 4_4:+74649550 Msa0702830:CDS
TGGAGTAAAGGCCTAAAGGA+CGG 0.638246 4_4:+74649681 Msa0702830:CDS
GTGTTTACACTGGTGGATGG+AGG 0.638524 4_4:+74649388 Msa0702830:CDS
TGGAAAGAAGGAATTCGCGA+AGG 0.641463 4_4:+74649474 Msa0702830:CDS
AATGTATTCCCTCTAATGTG+AGG 0.644444 4_4:-74652804 None:intergenic
AGATGGATCGGTATATGAAG+GGG 0.644736 4_4:+74649242 Msa0702830:CDS
GAGGACTTTATATTGGAACA+TGG 0.648337 4_4:+74649661 Msa0702830:CDS
TAACAAATATACAGACATCA+CGG 0.648800 4_4:-74653291 None:intergenic
GCCATCAGGAGCAAAGTACG+AGG 0.650915 4_4:+74649308 Msa0702830:CDS
TATGATGTGGTACTCTACAT+GGG 0.652027 4_4:+74653111 Msa0702830:CDS
GCAATTAGGAGTAAACATGC+CGG 0.652141 4_4:+74653023 Msa0702830:CDS
TATGCAAGGAGTTCTAATTG+TGG 0.655152 4_4:+74650022 Msa0702830:CDS
AGAAATGTTCAAATTGGACG+CGG 0.655936 4_4:+74650672 Msa0702830:CDS
GCTGTGTTTACACTGGTGGA+TGG 0.657960 4_4:+74649385 Msa0702830:CDS
GAGCAGTTGATCATTCCGAA+AGG 0.659532 4_4:+74652732 Msa0702830:CDS
ACATTGAGAGCATACTCCAT+CGG 0.662326 4_4:+74652822 Msa0702830:CDS
TGATATTCTGCTAGTCATGG+AGG 0.663987 4_4:+74648978 Msa0702830:exon
TCGAACGGCTGTGTTTACAC+TGG 0.664113 4_4:+74649378 Msa0702830:CDS
TTCAAGGGTATACTTCCCCA+CGG 0.668280 4_4:+74649198 Msa0702830:CDS
ACGGCAACGGGAAGTACACA+TGG 0.669163 4_4:+74649217 Msa0702830:CDS
ATCCATCGAATAACACTGAG+AGG 0.670109 4_4:+74651039 Msa0702830:CDS
GGAACATTCACAAAATCGAA+CGG 0.670799 4_4:+74649363 Msa0702830:CDS
CATCGTCGTTACGATCTGAA+GGG 0.676822 4_4:+74651200 Msa0702830:CDS
TTTGCTTCAAGAAGACAAGG+TGG 0.679586 4_4:+74653059 Msa0702830:CDS
GTGTACTTCCCGTTGCCGTG+GGG 0.689730 4_4:-74649213 None:intergenic
AAGTCTACAGAACAGTGTGG+AGG 0.692411 4_4:-74650472 None:intergenic
TAGAAGTCTACAGAACAGTG+TGG 0.705962 4_4:-74650475 None:intergenic
CCATCAGGAGCAAAGTACGA+GGG 0.707876 4_4:+74649309 Msa0702830:CDS
TGACGCTGTATTGCTCCAGG+AGG 0.761183 4_4:-74652539 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATTATTGAAAATAA+TGG + chr4_4:74648658-74648677 Msa0702830:intron 10.0%
!! AACTTAATTAAAAGTTAATA+TGG - chr4_4:74650861-74650880 None:intergenic 10.0%
!!! AATATCTTTTGTTTTATTTA+AGG - chr4_4:74651626-74651645 None:intergenic 10.0%
!! AATAAAAATATTTGTTTCAT+TGG - chr4_4:74651656-74651675 None:intergenic 10.0%
!!! CTATATTTTATATGTAATAA+TGG + chr4_4:74651689-74651708 Msa0702830:intron 10.0%
!!! TTCAATAATCTTTTTATTAG+TGG - chr4_4:74648653-74648672 None:intergenic 15.0%
!! CACTTGAATATTTATTTATT+TGG + chr4_4:74650285-74650304 Msa0702830:intron 15.0%
!!! ATATGATTTTATGATTATTG+TGG + chr4_4:74650570-74650589 Msa0702830:intron 15.0%
!!! TATTGCTATTAATTTTATCT+TGG - chr4_4:74651250-74651269 None:intergenic 15.0%
!!! TGTAATACAATTTTACTTTT+TGG + chr4_4:74651525-74651544 Msa0702830:intron 15.0%
!! AATAAAACAAAAGATATTAG+TGG + chr4_4:74651628-74651647 Msa0702830:intron 15.0%
!!! AAAATCATCTGTTTAATTTT+CGG - chr4_4:74652078-74652097 None:intergenic 15.0%
!! ATATAAGTGTAAAGAAATAT+TGG + chr4_4:74652103-74652122 Msa0702830:intron 15.0%
!!! TATTTGTTATCTTTTCATTT+TGG + chr4_4:74653305-74653324 Msa0702830:three_prime_UTR 15.0%
!! TAAAAATCAACATATCTGTT+AGG + chr4_4:74648564-74648583 Msa0702830:intron 20.0%
!!! TAATTAGTTTCTTTATTCTC+TGG - chr4_4:74648623-74648642 None:intergenic 20.0%
!! AGATTATTGAAAATAATGGT+TGG + chr4_4:74648662-74648681 Msa0702830:intron 20.0%
!! TAATTTATTTGGATAACTTC+AGG - chr4_4:74648957-74648976 None:intergenic 20.0%
!! CAGAATATCACTAATTTATT+TGG - chr4_4:74648968-74648987 None:intergenic 20.0%
!! TATATTGGAAATTGGAAAAA+AGG + chr4_4:74649531-74649550 Msa0702830:CDS 20.0%
!! ATATTGGAAATTGGAAAAAA+GGG + chr4_4:74649532-74649551 Msa0702830:CDS 20.0%
!! TATCAGAATAACATGTATAT+AGG + chr4_4:74650536-74650555 Msa0702830:intron 20.0%
!! ACTAAAAAAATATGAGCTAA+AGG + chr4_4:74650807-74650826 Msa0702830:CDS 20.0%
!! ACTCTTATTACAAAATTCTT+CGG + chr4_4:74651015-74651034 Msa0702830:CDS 20.0%
!!! AGAAAACAACAAAGTATTTA+TGG - chr4_4:74651125-74651144 None:intergenic 20.0%
!!! TCTAAAATACGAATTTCATA+TGG + chr4_4:74651289-74651308 Msa0702830:CDS 20.0%
!! AAAAGTTACTCTTATAAAGT+AGG - chr4_4:74651350-74651369 None:intergenic 20.0%
!! TACTAACATAATCATGAAAT+AGG - chr4_4:74651445-74651464 None:intergenic 20.0%
!!! ATACAATTTTACTTTTTGGA+CGG + chr4_4:74651529-74651548 Msa0702830:intron 20.0%
!! CATATCATATTCTAAATAAC+TGG - chr4_4:74652607-74652626 None:intergenic 20.0%
!! GATATCAATATATAATCACT+AGG - chr4_4:74652647-74652666 None:intergenic 20.0%
!! TTTGTAATTAATTGTTCCAA+AGG + chr4_4:74653340-74653359 Msa0702830:three_prime_UTR 20.0%
!! CAAATCAATCATATACTAAA+TGG - chr4_4:74653488-74653507 None:intergenic 20.0%
! AAAAATTGAGATGAGAAAGA+TGG - chr4_4:74648181-74648200 None:intergenic 25.0%
! AAGGATTACAGAAAAGTTTA+GGG + chr4_4:74648513-74648532 Msa0702830:intron 25.0%
! GGTAAAAACATCTAAATAAG+TGG + chr4_4:74648683-74648702 Msa0702830:intron 25.0%
! AAAACATCTAAATAAGTGGA+TGG + chr4_4:74648687-74648706 Msa0702830:intron 25.0%
! AAAATTCCAAAGACAGAAAA+AGG - chr4_4:74648718-74648737 None:intergenic 25.0%
!! TGTTTTCAGACTCATTATAT+TGG + chr4_4:74648812-74648831 Msa0702830:intron 25.0%
! GTTTAACCTTTCAAAAGAAA+TGG + chr4_4:74648924-74648943 Msa0702830:five_prime_UTR 25.0%
! CAAAACAAAAGAGAATGAAT+AGG - chr4_4:74649042-74649061 None:intergenic 25.0%
!! TAACTGTTTCTTGTTAATGT+AGG + chr4_4:74649130-74649149 Msa0702830:intron 25.0%
!!! AATGATGGAAGTATCTATAT+TGG + chr4_4:74649516-74649535 Msa0702830:CDS 25.0%
!! GAAGTATCTATATTGGAAAT+TGG + chr4_4:74649523-74649542 Msa0702830:CDS 25.0%
! ATCGCATAATAAGAACAAAA+AGG + chr4_4:74650070-74650089 Msa0702830:CDS 25.0%
! GTAAAGAAGAGTTCAATTAT+AGG + chr4_4:74650116-74650135 Msa0702830:CDS 25.0%
!!! ATTTTTTTTGCTCAATTCTC+AGG + chr4_4:74650338-74650357 Msa0702830:intron 25.0%
! ATGTGATTTCATATATTTCC+AGG + chr4_4:74650641-74650660 Msa0702830:intron 25.0%
! TTTGAGAGAAATGTTCAAAT+TGG + chr4_4:74650666-74650685 Msa0702830:CDS 25.0%
! AATTAAGTACTTAAGAAGTC+AGG - chr4_4:74650915-74650934 None:intergenic 25.0%
! CTCTTATTACAAAATTCTTC+GGG + chr4_4:74651016-74651035 Msa0702830:CDS 25.0%
! ACTTCTTTCTTCTTGTTAAT+TGG + chr4_4:74651094-74651113 Msa0702830:intron 25.0%
!!! GTTAGTATTTTATTTCCCAT+AGG + chr4_4:74651458-74651477 Msa0702830:intron 25.0%
!! ACTATCAAAATCTGAAATTG+TGG - chr4_4:74652247-74652266 None:intergenic 25.0%
!!! TTTCAGATTTTGATAGTACT+TGG + chr4_4:74652250-74652269 Msa0702830:intron 25.0%
! AATATATAATCACTAGGCTT+GGG - chr4_4:74652641-74652660 None:intergenic 25.0%
!! AAACGTTCAGCATAAATTTT+AGG - chr4_4:74653234-74653253 None:intergenic 25.0%
! CATCAATTTCATGGATAAAA+AGG + chr4_4:74653254-74653273 Msa0702830:CDS 25.0%
! TAACAAATATACAGACATCA+CGG - chr4_4:74653294-74653313 None:intergenic 25.0%
! AATTCAAACAGCTCAATAAA+AGG + chr4_4:74653454-74653473 Msa0702830:three_prime_UTR 25.0%
! TCACATGACACTTAATTATT+TGG + chr4_4:74653518-74653537 Msa0702830:three_prime_UTR 25.0%
! CACATGACACTTAATTATTT+GGG + chr4_4:74653519-74653538 Msa0702830:three_prime_UTR 25.0%
TGACAGGAATAAAAACTGAA+AGG - chr4_4:74648128-74648147 None:intergenic 30.0%
!! AGGATACTTATTTTCATCCA+AGG + chr4_4:74648149-74648168 Msa0702830:five_prime_UTR 30.0%
!!! CTTTTGTTTTCTTTCTGTTC+TGG + chr4_4:74648203-74648222 Msa0702830:intron 30.0%
TGTATAGAAACATCAGAACT+AGG - chr4_4:74648260-74648279 None:intergenic 30.0%
AAAGTCAGATCAAAGAAAGA+TGG - chr4_4:74648289-74648308 None:intergenic 30.0%
TGAAACAATACATGCATGTT+GGG - chr4_4:74648407-74648426 None:intergenic 30.0%
GAGTGTAATCAACATCATAA+AGG - chr4_4:74648486-74648505 None:intergenic 30.0%
! ACTTTTCTGTAATCCTTGTT+AGG - chr4_4:74648510-74648529 None:intergenic 30.0%
CAAGGATTACAGAAAAGTTT+AGG + chr4_4:74648512-74648531 Msa0702830:intron 30.0%
!!! TTTCTGTCTTTGGAATTTTG+TGG + chr4_4:74648719-74648738 Msa0702830:intron 30.0%
!!! TTCTGTCTTTGGAATTTTGT+GGG + chr4_4:74648720-74648739 Msa0702830:intron 30.0%
! TCAACACTAAAGAATGCTTT+TGG - chr4_4:74648754-74648773 None:intergenic 30.0%
! TTAGTGTTGAAACCTGTTAA+AGG + chr4_4:74648764-74648783 Msa0702830:intron 30.0%
ACAACAATGAATCCTTTAAC+AGG - chr4_4:74648779-74648798 None:intergenic 30.0%
!!! AATGTGCCATTTCTTTTGAA+AGG - chr4_4:74648933-74648952 None:intergenic 30.0%
TGTCTACATTGGTAAATTCA+AGG + chr4_4:74649182-74649201 Msa0702830:CDS 30.0%
GTCTACATTGGTAAATTCAA+GGG + chr4_4:74649183-74649202 Msa0702830:CDS 30.0%
GGAAAATTTACTTGGAATGA+TGG + chr4_4:74649501-74649520 Msa0702830:CDS 30.0%
TGGAAAAAAGGGAAAATAGA+TGG + chr4_4:74649543-74649562 Msa0702830:CDS 30.0%
AAAAAGGGAAAATAGATGGA+AGG + chr4_4:74649547-74649566 Msa0702830:CDS 30.0%
AAAAGGGAAAATAGATGGAA+GGG + chr4_4:74649548-74649567 Msa0702830:CDS 30.0%
!! TTTAACGGTGATGTTTTTGA+TGG + chr4_4:74649585-74649604 Msa0702830:CDS 30.0%
! TTTGATGGTTGTTGGTTAAA+TGG + chr4_4:74649600-74649619 Msa0702830:CDS 30.0%
! GGAGTTTATAGATTTTCAGA+TGG + chr4_4:74649639-74649658 Msa0702830:CDS 30.0%
! GTTTATAGATTTTCAGATGG+AGG + chr4_4:74649642-74649661 Msa0702830:CDS 30.0%
TATATTGGAACATGGAGTAA+AGG + chr4_4:74649669-74649688 Msa0702830:CDS 30.0%
! AACAACCATCTCTAAAGAAA+TGG + chr4_4:74649733-74649752 Msa0702830:CDS 30.0%
ATTCTCATTGCTATGAAGAT+TGG - chr4_4:74649763-74649782 None:intergenic 30.0%
TCATAGCAATGAGAATTGTA+AGG + chr4_4:74649767-74649786 Msa0702830:CDS 30.0%
CTACGGTTAAATCTTGAATT+TGG - chr4_4:74649795-74649814 None:intergenic 30.0%
! ATCTCAAAGTACTTCATTGT+TGG + chr4_4:74649866-74649885 Msa0702830:CDS 30.0%
! TGAGTAATATGGTTTTCGAA+AGG + chr4_4:74649994-74650013 Msa0702830:CDS 30.0%
! GAGTAATATGGTTTTCGAAA+GGG + chr4_4:74649995-74650014 Msa0702830:CDS 30.0%
TAAGCTTCAGATAATAGCTT+CGG - chr4_4:74650157-74650176 None:intergenic 30.0%
TTTCATAACTTCCTACATGA+TGG - chr4_4:74650993-74651012 None:intergenic 30.0%
AAGAAGTAAAGACGGATATT+AGG - chr4_4:74651081-74651100 None:intergenic 30.0%
CAAGAAGAAAGAAGTAAAGA+CGG - chr4_4:74651089-74651108 None:intergenic 30.0%
!!! ACTTTGTTGTTTTCTTCGTT+AGG + chr4_4:74651130-74651149 Msa0702830:intron 30.0%
! AGTAGTAAAGCATTTCCTAT+GGG - chr4_4:74651476-74651495 None:intergenic 30.0%
! AAGTAGTAAAGCATTTCCTA+TGG - chr4_4:74651477-74651496 None:intergenic 30.0%
! CTTTGTTATCGTAAGTACTA+TGG + chr4_4:74651494-74651513 Msa0702830:intron 30.0%
CTAATAATACTGGCACAATA+TGG + chr4_4:74651553-74651572 Msa0702830:intron 30.0%
ATTTGTGAGGGATATCAATA+AGG - chr4_4:74651792-74651811 None:intergenic 30.0%
TCTCTCTATTTGTAAAGCTT+TGG - chr4_4:74651943-74651962 None:intergenic 30.0%
ATCTCTTATTGACAGTATCA+TGG + chr4_4:74652027-74652046 Msa0702830:intron 30.0%
!!! ATGACCTGACTTTATTTTTC+TGG + chr4_4:74652402-74652421 Msa0702830:intron 30.0%
TGAACCAGAAAAATAAAGTC+AGG - chr4_4:74652409-74652428 None:intergenic 30.0%
!!! TGACTTTATTTTTCTGGTTC+AGG + chr4_4:74652408-74652427 Msa0702830:intron 30.0%
AATTGATTACAGTCTTCTGT+TGG + chr4_4:74652472-74652491 Msa0702830:CDS 30.0%
ATTGATTACAGTCTTCTGTT+GGG + chr4_4:74652473-74652492 Msa0702830:CDS 30.0%
CAATATATAATCACTAGGCT+TGG - chr4_4:74652642-74652661 None:intergenic 30.0%
GAACTTAAGATCACTAAACT+AGG + chr4_4:74652935-74652954 Msa0702830:intron 30.0%
GGGAATAATAGATATACTTC+AGG + chr4_4:74653131-74653150 Msa0702830:CDS 30.0%
TCTGTTACTGATATAGTCAT+AGG - chr4_4:74653210-74653229 None:intergenic 30.0%
TGAACGTTTCATCAATTTCA+TGG + chr4_4:74653245-74653264 Msa0702830:CDS 30.0%
!! TGAGATTTGTTTTTCCTGTT+TGG + chr4_4:74653417-74653436 Msa0702830:three_prime_UTR 30.0%
! TCAGTTTTTATTCCTGTCAC+AGG + chr4_4:74648129-74648148 Msa0702830:five_prime_UTR 35.0%
GAAAATAAGTATCCTGTGAC+AGG - chr4_4:74648144-74648163 None:intergenic 35.0%
CTGAAACAATACATGCATGT+TGG - chr4_4:74648408-74648427 None:intergenic 35.0%
CAACATGCATGTATTGTTTC+AGG + chr4_4:74648406-74648425 Msa0702830:intron 35.0%
TTGATTACACTCTCCTAACA+AGG + chr4_4:74648494-74648513 Msa0702830:intron 35.0%
TTCCAAAGACAGAAAAAGGA+GGG - chr4_4:74648714-74648733 None:intergenic 35.0%
ATTCCAAAGACAGAAAAAGG+AGG - chr4_4:74648715-74648734 None:intergenic 35.0%
ATGTTTCAGATTGCTCTATC+AGG + chr4_4:74648841-74648860 Msa0702830:intron 35.0%
ATCAGGTCACAATAAAAAGC+TGG + chr4_4:74648858-74648877 Msa0702830:five_prime_UTR 35.0%
TAGTGATATTCTGCTAGTCA+TGG + chr4_4:74648975-74648994 Msa0702830:exon 35.0%
GAAGAGAAGTCCTTTACAAA+TGG + chr4_4:74649156-74649175 Msa0702830:CDS 35.0%
GTAGACATCACCATTTGTAA+AGG - chr4_4:74649169-74649188 None:intergenic 35.0%
! ACAAATGGTGATGTCTACAT+TGG + chr4_4:74649171-74649190 Msa0702830:CDS 35.0%
TGGATAGATGGAAAAATGAC+AGG + chr4_4:74649267-74649286 Msa0702830:CDS 35.0%
GGATAGATGGAAAAATGACA+GGG + chr4_4:74649268-74649287 Msa0702830:CDS 35.0%
ATGGAAAAATGACAGGGAAA+GGG + chr4_4:74649274-74649293 Msa0702830:CDS 35.0%
GGAACATTCACAAAATCGAA+CGG + chr4_4:74649363-74649382 Msa0702830:CDS 35.0%
TCCAATTCAGATGTTTACGA+AGG + chr4_4:74649447-74649466 Msa0702830:CDS 35.0%
ACCTTCGTAAACATCTGAAT+TGG - chr4_4:74649451-74649470 None:intergenic 35.0%
CAGATGTTTACGAAGGTTTA+TGG + chr4_4:74649454-74649473 Msa0702830:CDS 35.0%
TACGAAGGTTTATGGAAAGA+AGG + chr4_4:74649462-74649481 Msa0702830:CDS 35.0%
AAAGGGAAAATAGATGGAAG+GGG + chr4_4:74649549-74649568 Msa0702830:CDS 35.0%
GGGATTATGAAGTGGTTTAA+CGG + chr4_4:74649570-74649589 Msa0702830:CDS 35.0%
!! GTGATGTTTTTGATGGTTGT+TGG + chr4_4:74649592-74649611 Msa0702830:CDS 35.0%
! TGGTTAAATGGACTTAGACA+AGG + chr4_4:74649612-74649631 Msa0702830:CDS 35.0%
TCAGATGGAGGACTTTATAT+TGG + chr4_4:74649654-74649673 Msa0702830:CDS 35.0%
GAGGACTTTATATTGGAACA+TGG + chr4_4:74649661-74649680 Msa0702830:CDS 35.0%
AAAGGAACATTCTATCCTTC+TGG + chr4_4:74649705-74649724 Msa0702830:CDS 35.0%
! GTACACCATTTCTTTAGAGA+TGG - chr4_4:74649741-74649760 None:intergenic 35.0%
! TGAACTTTTTGATCTACCAC+TGG - chr4_4:74649838-74649857 None:intergenic 35.0%
GGTATCTGGTATGAGTAATA+TGG + chr4_4:74649983-74650002 Msa0702830:CDS 35.0%
TTCGAAAGGGAATATATGCA+AGG + chr4_4:74650008-74650027 Msa0702830:CDS 35.0%
! TATGCAAGGAGTTCTAATTG+TGG + chr4_4:74650022-74650041 Msa0702830:CDS 35.0%
CACTGTAGGAAAAATTACAC+CGG + chr4_4:74650363-74650382 Msa0702830:CDS 35.0%
GATAAGGATGTACTTTCCTA+AGG + chr4_4:74650432-74650451 Msa0702830:CDS 35.0%
ATGAATACCTGAAGACCATA+GGG - chr4_4:74650516-74650535 None:intergenic 35.0%
AATGAATACCTGAAGACCAT+AGG - chr4_4:74650517-74650536 None:intergenic 35.0%
GAACATTTCTCTCAAATTCC+TGG - chr4_4:74650662-74650681 None:intergenic 35.0%
AGAAATGTTCAAATTGGACG+CGG + chr4_4:74650672-74650691 Msa0702830:CDS 35.0%
ACAAATGGACATCATGTACT+CGG - chr4_4:74650698-74650717 None:intergenic 35.0%
ATATCTTCAGCTGGAAAAAG+TGG + chr4_4:74650739-74650758 Msa0702830:CDS 35.0%
! GCATACATTCCTCTTGTTAT+AGG + chr4_4:74650939-74650958 Msa0702830:intron 35.0%
CCTACATGATGGTAGTATTT+AGG - chr4_4:74650982-74651001 None:intergenic 35.0%
CCTAAATACTACCATCATGT+AGG + chr4_4:74650979-74650998 Msa0702830:CDS 35.0%
! TGTAGCAATTTTGCTCTTCT+AGG + chr4_4:74651405-74651424 Msa0702830:intron 35.0%
!! TTTGGACGGACTAATAATAC+TGG + chr4_4:74651543-74651562 Msa0702830:intron 35.0%
ATATCCCTCACAAATTGATG+CGG + chr4_4:74651797-74651816 Msa0702830:intron 35.0%
!!! GCTTGTGGATATTTTAACCA+AGG - chr4_4:74651879-74651898 None:intergenic 35.0%
TGGTTAAAATATCCACAAGC+CGG + chr4_4:74651879-74651898 Msa0702830:intron 35.0%
GACAGTATCATGGTAGTAAT+AGG + chr4_4:74652037-74652056 Msa0702830:intron 35.0%
TCGCTAAAATTTGCAATAGC+AGG - chr4_4:74652164-74652183 None:intergenic 35.0%
AATTACTTTCCCTTCAGACA+AGG - chr4_4:74652365-74652384 None:intergenic 35.0%
TGAAGGGAAAGTAATTTACC+TGG + chr4_4:74652369-74652388 Msa0702830:intron 35.0%
TATAGTTTACCTTCTGCAGA+TGG + chr4_4:74652563-74652582 Msa0702830:CDS 35.0%
ATATACTAACCATCTGCAGA+AGG - chr4_4:74652575-74652594 None:intergenic 35.0%
TTCTAAATAACTGGCATCAG+AGG - chr4_4:74652598-74652617 None:intergenic 35.0%
CACCAGATTTACTCAAACAA+GGG + chr4_4:74652709-74652728 Msa0702830:intron 35.0%
ACCAGATTTACTCAAACAAG+GGG + chr4_4:74652710-74652729 Msa0702830:intron 35.0%
AATGTATTCCCTCTAATGTG+AGG - chr4_4:74652807-74652826 None:intergenic 35.0%
ATGTTTACTCCTAATTGCAC+CGG - chr4_4:74653021-74653040 None:intergenic 35.0%
!! TAGTTTGCTTCAAGAAGACA+AGG + chr4_4:74653056-74653075 Msa0702830:CDS 35.0%
TTATGATGTGGTACTCTACA+TGG + chr4_4:74653110-74653129 Msa0702830:CDS 35.0%
TATGATGTGGTACTCTACAT+GGG + chr4_4:74653111-74653130 Msa0702830:CDS 35.0%
! ATCAAACTGCAGTGATTTGT+AGG - chr4_4:74653187-74653206 None:intergenic 35.0%
!! CATGGATAAAAAGGTATTCC+CGG + chr4_4:74653263-74653282 Msa0702830:CDS 35.0%
GTACACAATCATTCATCCTT+TGG - chr4_4:74653359-74653378 None:intergenic 35.0%
! TTTTTCCTGTTTGGCAAAAG+AGG + chr4_4:74653426-74653445 Msa0702830:three_prime_UTR 35.0%
AGGTCACAATAAAAAGCTGG+TGG + chr4_4:74648861-74648880 Msa0702830:five_prime_UTR 40.0%
TGATATTCTGCTAGTCATGG+AGG + chr4_4:74648978-74648997 Msa0702830:exon 40.0%
TCAGATGGATCGGTATATGA+AGG + chr4_4:74649240-74649259 Msa0702830:CDS 40.0%
CAGATGGATCGGTATATGAA+GGG + chr4_4:74649241-74649260 Msa0702830:CDS 40.0%
AGATGGATCGGTATATGAAG+GGG + chr4_4:74649242-74649261 Msa0702830:CDS 40.0%
TATGAAGGGGATTGGATAGA+TGG + chr4_4:74649255-74649274 Msa0702830:CDS 40.0%
GATGGAAAAATGACAGGGAA+AGG + chr4_4:74649273-74649292 Msa0702830:CDS 40.0%
CAGGGAAAGGGATACTTATA+TGG + chr4_4:74649286-74649305 Msa0702830:CDS 40.0%
TTCTCCGGGAATTATCTTCA+CGG + chr4_4:74649336-74649355 Msa0702830:CDS 40.0%
AAGGCAGCGGAAAATTTACT+TGG + chr4_4:74649493-74649512 Msa0702830:CDS 40.0%
AAGGGAAAATAGATGGAAGG+GGG + chr4_4:74649550-74649569 Msa0702830:CDS 40.0%
! AATGGACTTAGACAAGGATC+TGG + chr4_4:74649618-74649637 Msa0702830:CDS 40.0%
AACATGGAGTAAAGGCCTAA+AGG + chr4_4:74649677-74649696 Msa0702830:CDS 40.0%
! ATGTTCCTTTTCCGTCCTTT+AGG - chr4_4:74649695-74649714 None:intergenic 40.0%
!!! GAGCTTTTTCAGAGAGACTA+CGG - chr4_4:74649812-74649831 None:intergenic 40.0%
TTATCGCAGACCTCTAATGA+AGG + chr4_4:74649951-74649970 Msa0702830:CDS 40.0%
CTCAGATTGACCTTCATTAG+AGG - chr4_4:74649964-74649983 None:intergenic 40.0%
CTCTAATGAAGGTCAATCTG+AGG + chr4_4:74649962-74649981 Msa0702830:CDS 40.0%
!! CTGAAGCTTAATTTGCAGCT+TGG + chr4_4:74650167-74650186 Msa0702830:CDS 40.0%
!! TTAATTTGCAGCTTGGCATC+AGG + chr4_4:74650174-74650193 Msa0702830:CDS 40.0%
TCAATTCTCAGGTACACTGT+AGG + chr4_4:74650349-74650368 Msa0702830:intron 40.0%
!! CTGATTTTGGAGAAAGAGCT+AGG + chr4_4:74650410-74650429 Msa0702830:CDS 40.0%
TTGGAGAAAGAGCTAGGATA+AGG + chr4_4:74650416-74650435 Msa0702830:CDS 40.0%
AAGGATGTACTTTCCTAAGG+AGG + chr4_4:74650435-74650454 Msa0702830:CDS 40.0%
AGGATGTACTTTCCTAAGGA+GGG + chr4_4:74650436-74650455 Msa0702830:CDS 40.0%
TAGAAGTCTACAGAACAGTG+TGG - chr4_4:74650478-74650497 None:intergenic 40.0%
ACTGTTCTGTAGACTTCTAC+TGG + chr4_4:74650479-74650498 Msa0702830:CDS 40.0%
CTGGAAAGATTATTGCCCTA+TGG + chr4_4:74650498-74650517 Msa0702830:CDS 40.0%
ATTATTGCCCTATGGTCTTC+AGG + chr4_4:74650506-74650525 Msa0702830:CDS 40.0%
GAGTACATGATGTCCATTTG+TGG + chr4_4:74650697-74650716 Msa0702830:CDS 40.0%
TAGAGCACAATCACCACAAA+TGG - chr4_4:74650713-74650732 None:intergenic 40.0%
TTGTGGTGATTGTGCTCTAA+AGG + chr4_4:74650714-74650733 Msa0702830:CDS 40.0%
CTAAAGGACATATCTTCAGC+TGG + chr4_4:74650730-74650749 Msa0702830:CDS 40.0%
! TAGTCACCTCTTTTGCTTGA+TGG + chr4_4:74650834-74650853 Msa0702830:intron 40.0%
TATGGTCCATCAAGCAAAAG+AGG - chr4_4:74650843-74650862 None:intergenic 40.0%
TGAGCAGAACCTATAACAAG+AGG - chr4_4:74650951-74650970 None:intergenic 40.0%
ATCCATCGAATAACACTGAG+AGG + chr4_4:74651039-74651058 Msa0702830:CDS 40.0%
ATCGAATAACACTGAGAGGT+GGG + chr4_4:74651043-74651062 Msa0702830:CDS 40.0%
!! GTTGTTTTCTTCGTTAGGTG+CGG + chr4_4:74651135-74651154 Msa0702830:intron 40.0%
TTCAGCTTTCTTGCTTTCGT+TGG + chr4_4:74651589-74651608 Msa0702830:intron 40.0%
AGGTATTTCGATTCATCGCT+GGG - chr4_4:74651772-74651791 None:intergenic 40.0%
! AAGGTATTTCGATTCATCGC+TGG - chr4_4:74651773-74651792 None:intergenic 40.0%
!! CTGATGAGAAATTGATAGCG+AGG + chr4_4:74651842-74651861 Msa0702830:intron 40.0%
GGTTAAAATATCCACAAGCC+GGG + chr4_4:74651880-74651899 Msa0702830:intron 40.0%
CTTCGTGCACTCATGAAAAA+AGG + chr4_4:74651980-74651999 Msa0702830:intron 40.0%
TGCAATAGCAGGATCTAACA+AGG - chr4_4:74652153-74652172 None:intergenic 40.0%
TAGAACTTCTCCTTGTCTGA+AGG + chr4_4:74652352-74652371 Msa0702830:intron 40.0%
AGAACTTCTCCTTGTCTGAA+GGG + chr4_4:74652353-74652372 Msa0702830:intron 40.0%
AGGGAAAGTAATTTACCTGG+TGG + chr4_4:74652372-74652391 Msa0702830:intron 40.0%
TTCTCTAGACTGCAAGTTCT+TGG + chr4_4:74652436-74652455 Msa0702830:CDS 40.0%
TAGAGCTCCAGAGAATCTAA+AGG + chr4_4:74652505-74652524 Msa0702830:CDS 40.0%
GCACCAGATTTACTCAAACA+AGG + chr4_4:74652708-74652727 Msa0702830:intron 40.0%
! TCCCCTTGTTTGAGTAAATC+TGG - chr4_4:74652714-74652733 None:intergenic 40.0%
GCAACTAACAACAAGCCTTT+CGG - chr4_4:74652750-74652769 None:intergenic 40.0%
! ACATTGAGAGCATACTCCAT+CGG + chr4_4:74652822-74652841 Msa0702830:CDS 40.0%
ATCAACTTCCTTGTTACCGA+TGG - chr4_4:74652841-74652860 None:intergenic 40.0%
!! GAAGTTGATCTTTTACTGCC+CGG + chr4_4:74652852-74652871 Msa0702830:CDS 40.0%
AAATACTCACCTTGCAGTAC+CGG - chr4_4:74652874-74652893 None:intergenic 40.0%
GTTCCTAATGTAATAGCGAG+CGG - chr4_4:74652919-74652938 None:intergenic 40.0%
ATGAATGTTCCTCAGATTGC+CGG + chr4_4:74652999-74653018 Msa0702830:intron 40.0%
GCAATTAGGAGTAAACATGC+CGG + chr4_4:74653023-74653042 Msa0702830:CDS 40.0%
TTTGCTTCAAGAAGACAAGG+TGG + chr4_4:74653059-74653078 Msa0702830:CDS 40.0%
! ATCAGAAGTAGAGCTTTTCG+AGG + chr4_4:74653086-74653105 Msa0702830:CDS 40.0%
!! GCTTTTCGAGGTTTATGATG+TGG + chr4_4:74653098-74653117 Msa0702830:CDS 40.0%
TACAGACATCACGGTATTTC+CGG - chr4_4:74653285-74653304 None:intergenic 40.0%
GAGAAAGATGGAAGTGACCT+TGG - chr4_4:74648169-74648188 None:intergenic 45.0%
! GTCCCTCCTTTTTCTGTCTT+TGG + chr4_4:74648709-74648728 Msa0702830:intron 45.0%
TAGTCATGGAGGACAATGGA+AGG + chr4_4:74648989-74649008 Msa0702830:exon 45.0%
! TTCAAGGGTATACTTCCCCA+CGG + chr4_4:74649198-74649217 Msa0702830:CDS 45.0%
GTACACATGGTCAGATGGAT+CGG + chr4_4:74649230-74649249 Msa0702830:CDS 45.0%
GATCGGTATATGAAGGGGAT+TGG + chr4_4:74649247-74649266 Msa0702830:CDS 45.0%
GGGATACTTATATGGCCATC+AGG + chr4_4:74649294-74649313 Msa0702830:CDS 45.0%
GTGACCGTGAAGATAATTCC+CGG - chr4_4:74649343-74649362 None:intergenic 45.0%
GGGAATTATCTTCACGGTCA+CGG + chr4_4:74649342-74649361 Msa0702830:CDS 45.0%
TGGAGGATGAATGCTCATCA+CGG + chr4_4:74649405-74649424 Msa0702830:CDS 45.0%
ATGAATGCTCATCACGGGAT+TGG + chr4_4:74649411-74649430 Msa0702830:CDS 45.0%
TGGAAAGAAGGAATTCGCGA+AGG + chr4_4:74649474-74649493 Msa0702830:CDS 45.0%
ATGGAAGGGGGATTATGAAG+TGG + chr4_4:74649562-74649581 Msa0702830:CDS 45.0%
TGGAGTAAAGGCCTAAAGGA+CGG + chr4_4:74649681-74649700 Msa0702830:CDS 45.0%
AAAGGCCTAAAGGACGGAAA+AGG + chr4_4:74649687-74649706 Msa0702830:CDS 45.0%
! GATGGTTGTTTGCTACCAGA+AGG - chr4_4:74649723-74649742 None:intergenic 45.0%
GACATATGCAATCGTCAGCA+GGG - chr4_4:74649914-74649933 None:intergenic 45.0%
ATTAGAGGTCTGCGATAACG+CGG - chr4_4:74649949-74649968 None:intergenic 45.0%
! GAAGGTCAATCTGAGGTATC+TGG + chr4_4:74649969-74649988 Msa0702830:CDS 45.0%
GCTTCAGATAATAGCTTCGG+CGG - chr4_4:74650154-74650173 None:intergenic 45.0%
! GAAGTTCGGTCGTCTGATTT+TGG + chr4_4:74650397-74650416 Msa0702830:CDS 45.0%
GTCAATTGTGAACCCTCCTT+AGG - chr4_4:74650451-74650470 None:intergenic 45.0%
AAGTCTACAGAACAGTGTGG+AGG - chr4_4:74650475-74650494 None:intergenic 45.0%
! CACCTCTCAGTGTTATTCGA+TGG - chr4_4:74651044-74651063 None:intergenic 45.0%
CATCGAATAACACTGAGAGG+TGG + chr4_4:74651042-74651061 Msa0702830:CDS 45.0%
AACACTGAGAGGTGGGAAAA+AGG + chr4_4:74651050-74651069 Msa0702830:CDS 45.0%
!! TTAGGTGCGGTTTGTTGTCA+TGG + chr4_4:74651148-74651167 Msa0702830:intron 45.0%
!! TAGGTGCGGTTTGTTGTCAT+GGG + chr4_4:74651149-74651168 Msa0702830:intron 45.0%
CATCGTCGTTACGATCTGAA+GGG + chr4_4:74651200-74651219 Msa0702830:CDS 45.0%
GATCTGAAGGGATCTTCTCA+AGG + chr4_4:74651212-74651231 Msa0702830:CDS 45.0%
GCTTTCTTGCTTTCGTTGGT+AGG + chr4_4:74651593-74651612 Msa0702830:intron 45.0%
!! AGAAATTGATAGCGAGGTCG+AGG + chr4_4:74651848-74651867 Msa0702830:intron 45.0%
TGAGTGCACGAAGCATATTG+AGG - chr4_4:74651973-74651992 None:intergenic 45.0%
CAGGTCATATCATAACCACC+AGG - chr4_4:74652390-74652409 None:intergenic 45.0%
ACGAACGCCTTTAGATTCTC+TGG - chr4_4:74652515-74652534 None:intergenic 45.0%
GAGCAGTTGATCATTCCGAA+AGG + chr4_4:74652732-74652751 Msa0702830:CDS 45.0%
AGCATACTCCATCGGTAACA+AGG + chr4_4:74652830-74652849 Msa0702830:CDS 45.0%
AATACTCACCTTGCAGTACC+GGG - chr4_4:74652873-74652892 None:intergenic 45.0%
TTGCCGCTCGCTATTACATT+AGG + chr4_4:74652913-74652932 Msa0702830:intron 45.0%
AGCAAACTAGTAGCTTGAGC+CGG - chr4_4:74653045-74653064 None:intergenic 45.0%
ACAGACATCACGGTATTTCC+GGG - chr4_4:74653284-74653303 None:intergenic 45.0%
!! AAAAAAATAAAATACAATAA+TGG + chr4_4:74651728-74651747 Msa0702830:intron 5.0%
CTGCTAGTCATGGAGGACAA+TGG + chr4_4:74648985-74649004 Msa0702830:exon 50.0%
! GGGAAGTACACATGGTCAGA+TGG + chr4_4:74649225-74649244 Msa0702830:CDS 50.0%
CCATCAGGAGCAAAGTACGA+GGG + chr4_4:74649309-74649328 Msa0702830:CDS 50.0%
AAGTACGAGGGCGAATTCTC+CGG + chr4_4:74649321-74649340 Msa0702830:CDS 50.0%
TCGAACGGCTGTGTTTACAC+TGG + chr4_4:74649378-74649397 Msa0702830:CDS 50.0%
AACGGCTGTGTTTACACTGG+TGG + chr4_4:74649381-74649400 Msa0702830:CDS 50.0%
GCTGTGTTTACACTGGTGGA+TGG + chr4_4:74649385-74649404 Msa0702830:CDS 50.0%
! GTGTTTACACTGGTGGATGG+AGG + chr4_4:74649388-74649407 Msa0702830:CDS 50.0%
GGAGGATGAATGCTCATCAC+GGG + chr4_4:74649406-74649425 Msa0702830:CDS 50.0%
TCTGAAAAAGCTCGAGCCAG+TGG + chr4_4:74649819-74649838 Msa0702830:CDS 50.0%
CGACATATGCAATCGTCAGC+AGG - chr4_4:74649915-74649934 None:intergenic 50.0%
GATAATAGCTTCGGCGGTGT+TGG - chr4_4:74650148-74650167 None:intergenic 50.0%
CCTTCAGATCGTAACGACGA+TGG - chr4_4:74651202-74651221 None:intergenic 50.0%
CCATCGTCGTTACGATCTGA+AGG + chr4_4:74651199-74651218 Msa0702830:CDS 50.0%
CCAGCCGCATCAATTTGTGA+GGG - chr4_4:74651804-74651823 None:intergenic 50.0%
ACCAGCCGCATCAATTTGTG+AGG - chr4_4:74651805-74651824 None:intergenic 50.0%
TACTGACGCTGTATTGCTCC+AGG - chr4_4:74652545-74652564 None:intergenic 50.0%
TTCCCTCTAATGTGAGGTCC+AGG - chr4_4:74652801-74652820 None:intergenic 50.0%
! TTTTACTGCCCGGTACTGCA+AGG + chr4_4:74652862-74652881 Msa0702830:CDS 50.0%
! CTAATTGCACCGGCAATCTG+AGG - chr4_4:74653011-74653030 None:intergenic 50.0%
CTCAGATTGCCGGTGCAATT+AGG + chr4_4:74653009-74653028 Msa0702830:intron 50.0%
! GCAAGCCTCTTTTGCCAAAC+AGG - chr4_4:74653434-74653453 None:intergenic 50.0%
GGTATACTTCCCCACGGCAA+CGG + chr4_4:74649204-74649223 Msa0702830:CDS 55.0%
GTATACTTCCCCACGGCAAC+GGG + chr4_4:74649205-74649224 Msa0702830:CDS 55.0%
TGTGTACTTCCCGTTGCCGT+GGG - chr4_4:74649217-74649236 None:intergenic 55.0%
ATGTGTACTTCCCGTTGCCG+TGG - chr4_4:74649218-74649237 None:intergenic 55.0%
! ACGGCAACGGGAAGTACACA+TGG + chr4_4:74649217-74649236 Msa0702830:CDS 55.0%
GCCATCAGGAGCAAAGTACG+AGG + chr4_4:74649308-74649327 Msa0702830:CDS 55.0%
CCCTCGTACTTTGCTCCTGA+TGG - chr4_4:74649312-74649331 None:intergenic 55.0%
AGTACGAGGGCGAATTCTCC+GGG + chr4_4:74649322-74649341 Msa0702830:CDS 55.0%
GAAGGAATTCGCGAAGGCAG+CGG + chr4_4:74649480-74649499 Msa0702830:CDS 55.0%
CCCTCACAAATTGATGCGGC+TGG + chr4_4:74651801-74651820 Msa0702830:intron 55.0%
TCCTCATTCACCTCGCAACC+CGG - chr4_4:74651901-74651920 None:intergenic 55.0%
TGACGCTGTATTGCTCCAGG+AGG - chr4_4:74652542-74652561 None:intergenic 55.0%
ACGCCTGGACCTCACATTAG+AGG + chr4_4:74652795-74652814 Msa0702830:CDS 55.0%
CGCCTGGACCTCACATTAGA+GGG + chr4_4:74652796-74652815 Msa0702830:CDS 55.0%
GTGTACTTCCCGTTGCCGTG+GGG - chr4_4:74649216-74649235 None:intergenic 60.0%
GGTCTGCGATAACGCGGATG+AGG - chr4_4:74649943-74649962 None:intergenic 60.0%
CGAACTTCGCGTGCAGGAAC+CGG - chr4_4:74650385-74650404 None:intergenic 60.0%
CGGTTCCTGCACGCGAAGTT+CGG + chr4_4:74650383-74650402 Msa0702830:CDS 60.0%
GCGAGGTCGAGGTACAACCT+TGG + chr4_4:74651859-74651878 Msa0702830:intron 60.0%
TATCCACAAGCCGGGTTGCG+AGG + chr4_4:74651888-74651907 Msa0702830:intron 60.0%
! AAGGCGTTCGTCGAACCTCC+TGG + chr4_4:74652524-74652543 Msa0702830:CDS 60.0%
GACGACCGAACTTCGCGTGC+AGG - chr4_4:74650391-74650410 None:intergenic 65.0%
! TCACCTCGCAACCCGGCTTG+TGG - chr4_4:74651894-74651913 None:intergenic 65.0%
GCCGGGTTGCGAGGTGAATG+AGG + chr4_4:74651897-74651916 Msa0702830:intron 65.0%
! GGCGTCGCGTTGACGAAGCT+CGG - chr4_4:74652780-74652799 None:intergenic 65.0%
AGCTTCGTCAACGCGACGCC+TGG + chr4_4:74652780-74652799 Msa0702830:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 74648092 74653564 74648092 ID=Msa0702830;Name=Msa0702830
chr4_4 mRNA 74648092 74653564 74648092 ID=Msa0702830-mRNA-1;Parent=Msa0702830;Name=Msa0702830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=223|1|1|1|0.88|0.8|10|268|766
chr4_4 exon 74648092 74648170 74648092 ID=Msa0702830-mRNA-1:exon:23267;Parent=Msa0702830-mRNA-1
chr4_4 exon 74648850 74649010 74648850 ID=Msa0702830-mRNA-1:exon:23268;Parent=Msa0702830-mRNA-1
chr4_4 exon 74649152 74650195 74649152 ID=Msa0702830-mRNA-1:exon:23269;Parent=Msa0702830-mRNA-1
chr4_4 exon 74650360 74650527 74650360 ID=Msa0702830-mRNA-1:exon:23270;Parent=Msa0702830-mRNA-1
chr4_4 exon 74650663 74650828 74650663 ID=Msa0702830-mRNA-1:exon:23271;Parent=Msa0702830-mRNA-1
chr4_4 exon 74650961 74651071 74650961 ID=Msa0702830-mRNA-1:exon:23272;Parent=Msa0702830-mRNA-1
chr4_4 exon 74651152 74651339 74651152 ID=Msa0702830-mRNA-1:exon:23273;Parent=Msa0702830-mRNA-1
chr4_4 exon 74652430 74652584 74652430 ID=Msa0702830-mRNA-1:exon:23274;Parent=Msa0702830-mRNA-1
chr4_4 exon 74652715 74652883 74652715 ID=Msa0702830-mRNA-1:exon:23275;Parent=Msa0702830-mRNA-1
chr4_4 exon 74653014 74653564 74653014 ID=Msa0702830-mRNA-1:exon:23276;Parent=Msa0702830-mRNA-1
chr4_4 five_prime_UTR 74648092 74648170 74648092 ID=Msa0702830-mRNA-1:five_prime_utr;Parent=Msa0702830-mRNA-1
chr4_4 five_prime_UTR 74648850 74648993 74648850 ID=Msa0702830-mRNA-1:five_prime_utr;Parent=Msa0702830-mRNA-1
chr4_4 CDS 74648994 74649010 74648994 ID=Msa0702830-mRNA-1:cds;Parent=Msa0702830-mRNA-1
chr4_4 CDS 74649152 74650195 74649152 ID=Msa0702830-mRNA-1:cds;Parent=Msa0702830-mRNA-1
chr4_4 CDS 74650360 74650527 74650360 ID=Msa0702830-mRNA-1:cds;Parent=Msa0702830-mRNA-1
chr4_4 CDS 74650663 74650828 74650663 ID=Msa0702830-mRNA-1:cds;Parent=Msa0702830-mRNA-1
chr4_4 CDS 74650961 74651071 74650961 ID=Msa0702830-mRNA-1:cds;Parent=Msa0702830-mRNA-1
chr4_4 CDS 74651152 74651339 74651152 ID=Msa0702830-mRNA-1:cds;Parent=Msa0702830-mRNA-1
chr4_4 CDS 74652430 74652584 74652430 ID=Msa0702830-mRNA-1:cds;Parent=Msa0702830-mRNA-1
chr4_4 CDS 74652715 74652883 74652715 ID=Msa0702830-mRNA-1:cds;Parent=Msa0702830-mRNA-1
chr4_4 CDS 74653014 74653296 74653014 ID=Msa0702830-mRNA-1:cds;Parent=Msa0702830-mRNA-1
chr4_4 three_prime_UTR 74653297 74653564 74653297 ID=Msa0702830-mRNA-1:three_prime_utr;Parent=Msa0702830-mRNA-1
Gene Sequence

>Msa0702830

ATGGAGGACAATGGAAGGTTTGAAGAGAAGTCCTTTACAAATGGTGATGTCTACATTGGTAAATTCAAGGGTATACTTCCCCACGGCAACGGGAAGTACACATGGTCAGATGGATCGGTATATGAAGGGGATTGGATAGATGGAAAAATGACAGGGAAAGGGATACTTATATGGCCATCAGGAGCAAAGTACGAGGGCGAATTCTCCGGGAATTATCTTCACGGTCACGGAACATTCACAAAATCGAACGGCTGTGTTTACACTGGTGGATGGAGGATGAATGCTCATCACGGGATTGGACGAAAAGTGTATTCCAATTCAGATGTTTACGAAGGTTTATGGAAAGAAGGAATTCGCGAAGGCAGCGGAAAATTTACTTGGAATGATGGAAGTATCTATATTGGAAATTGGAAAAAAGGGAAAATAGATGGAAGGGGGATTATGAAGTGGTTTAACGGTGATGTTTTTGATGGTTGTTGGTTAAATGGACTTAGACAAGGATCTGGAGTTTATAGATTTTCAGATGGAGGACTTTATATTGGAACATGGAGTAAAGGCCTAAAGGACGGAAAAGGAACATTCTATCCTTCTGGTAGCAAACAACCATCTCTAAAGAAATGGTGTACCAATCTTCATAGCAATGAGAATTGTAAGGTTCCAAATTCAAGATTTAACCGTAGTCTCTCTGAAAAAGCTCGAGCCAGTGGTAGATCAAAAAGTTCACGTCATTTATCTCAAAGTACTTCATTGTTGGATGAGAATTGTGTGATTCAAAACCCTGCTGACGATTGCATATGTCGTGATTCCTCATCCGCGTTATCGCAGACCTCTAATGAAGGTCAATCTGAGGTATCTGGTATGAGTAATATGGTTTTCGAAAGGGAATATATGCAAGGAGTTCTAATTGTGGAGAGACTTCGTGAGTATTCAGAAATATCGCATAATAAGAACAAAAAGGAAAGTAAATTTAGTATGAAGCAAGTAAAGAAGAGTTCAATTATAGGCACTTTCCAACACCGCCGAAGCTATTATCTGAAGCTTAATTTGCAGCTTGGCATCAGGTACACTGTAGGAAAAATTACACCGGTTCCTGCACGCGAAGTTCGGTCGTCTGATTTTGGAGAAAGAGCTAGGATAAGGATGTACTTTCCTAAGGAGGGTTCACAATTGACTCCTCCACACTGTTCTGTAGACTTCTACTGGAAAGATTATTGCCCTATGGTCTTCAGGAATTTGAGAGAAATGTTCAAATTGGACGCGGCCGAGTACATGATGTCCATTTGTGGTGATTGTGCTCTAAAGGACATATCTTCAGCTGGAAAAAGTGGCAGCATATTCTTTATTTCTCAAGATGACAAATTTGTGATCAAGACACTAAAAAAATATGAGCTAAAGGTTCTGCTCAATATGCTTCCTAAATACTACCATCATGTAGGAAGTTATGAAAATACTCTTATTACAAAATTCTTCGGGATCCATCGAATAACACTGAGAGGTGGGAAAAAGGTGCGGTTTGTTGTCATGGGAAATATGTTTTGCACAGAACTTCATATCCATCGTCGTTACGATCTGAAGGGATCTTCTCAAGGAAGATATACAAGCCAAGATAAAATTAATAGCAATACAACATTGAAAGATCTTGATCTAAAATACGAATTTCATATGGATAAAAAGTTGCGAGAATCGTTATTCAAGCAAATTTCTCTAGACTGCAAGTTCTTGGAATCTCAGCACATAATTGATTACAGTCTTCTGTTGGGATTGCATTTTAGAGCTCCAGAGAATCTAAAGGCGTTCGTCGAACCTCCTGGAGCAATACAGCGTCAGTATAGTTTACCTTCTGCAGATGATTTACTCAAACAAGGGGAGCAGTTGATCATTCCGAAAGGCTTGTTGTTAGTTGCACATGAACCGAGCTTCGTCAACGCGACGCCTGGACCTCACATTAGAGGGAATACATTGAGAGCATACTCCATCGGTAACAAGGAAGTTGATCTTTTACTGCCCGGTACTGCAAGATTGCCGGTGCAATTAGGAGTAAACATGCCGGCTCAAGCTACTAGTTTGCTTCAAGAAGACAAGGTGGAAGAATCAGAAGTAGAGCTTTTCGAGGTTTATGATGTGGTACTCTACATGGGAATAATAGATATACTTCAGGAATACACTGTCAAAAAGAAACTTGAGCATGCCTACAAATCACTGCAGTTTGATCCTATGACTATATCAGTAACAGAACCTAAAATTTATGCTGAACGTTTCATCAATTTCATGGATAAAAAGGTATTCCCGGAAATACCGTGA
Protein sequence

>Msa0702830

MEDNGRFEEKSFTNGDVYIGKFKGILPHGNGKYTWSDGSVYEGDWIDGKMTGKGILIWPSGAKYEGEFSGNYLHGHGTFTKSNGCVYTGGWRMNAHHGIGRKVYSNSDVYEGLWKEGIREGSGKFTWNDGSIYIGNWKKGKIDGRGIMKWFNGDVFDGCWLNGLRQGSGVYRFSDGGLYIGTWSKGLKDGKGTFYPSGSKQPSLKKWCTNLHSNENCKVPNSRFNRSLSEKARASGRSKSSRHLSQSTSLLDENCVIQNPADDCICRDSSSALSQTSNEGQSEVSGMSNMVFEREYMQGVLIVERLREYSEISHNKNKKESKFSMKQVKKSSIIGTFQHRRSYYLKLNLQLGIRYTVGKITPVPAREVRSSDFGERARIRMYFPKEGSQLTPPHCSVDFYWKDYCPMVFRNLREMFKLDAAEYMMSICGDCALKDISSAGKSGSIFFISQDDKFVIKTLKKYELKVLLNMLPKYYHHVGSYENTLITKFFGIHRITLRGGKKVRFVVMGNMFCTELHIHRRYDLKGSSQGRYTSQDKINSNTTLKDLDLKYEFHMDKKLRESLFKQISLDCKFLESQHIIDYSLLLGLHFRAPENLKAFVEPPGAIQRQYSLPSADDLLKQGEQLIIPKGLLLVAHEPSFVNATPGPHIRGNTLRAYSIGNKEVDLLLPGTARLPVQLGVNMPAQATSLLQEDKVEESEVELFEVYDVVLYMGIIDILQEYTVKKKLEHAYKSLQFDPMTISVTEPKIYAERFINFMDKKVFPEIP*