Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346560 | XP_013443114.1 | 96.875 | 256 | 8 | 0 | 1 | 256 | 1 | 256 | 0.0 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346560 | sp|Q9SZM1|EXP20_ARATH | 65.306 | 245 | 81 | 2 | 14 | 256 | 12 | 254 | 2.57e-118 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346560 | I3SE17 | 96.875 | 256 | 8 | 0 | 1 | 256 | 1 | 256 | 0.0 | 521 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1346560 | 0.866805 | 2.180184e-65 | -8.615850e-47 |
| Msa0001940 | Msa1346560 | 0.811190 | 7.923745e-51 | -8.615850e-47 |
| Msa0002580 | Msa1346560 | 0.825929 | 3.586011e-54 | -8.615850e-47 |
| Msa0005890 | Msa1346560 | 0.830893 | 2.271782e-55 | -8.615850e-47 |
| Msa0017670 | Msa1346560 | 0.802811 | 4.698834e-49 | -8.615850e-47 |
| Msa0017930 | Msa1346560 | 0.817461 | 3.258907e-52 | -8.615850e-47 |
| Msa0017950 | Msa1346560 | 0.819443 | 1.158573e-52 | -8.615850e-47 |
| Msa0024550 | Msa1346560 | 0.803262 | 3.790527e-49 | -8.615850e-47 |
| Msa0027820 | Msa1346560 | 0.816903 | 4.350674e-52 | -8.615850e-47 |
| Msa0042640 | Msa1346560 | 0.804015 | 2.646261e-49 | -8.615850e-47 |
| Msa0054690 | Msa1346560 | 0.816950 | 4.245005e-52 | -8.615850e-47 |
| Msa0067330 | Msa1346560 | 0.805689 | 1.182630e-49 | -8.615850e-47 |
| Msa0077340 | Msa1346560 | 0.825786 | 3.875639e-54 | -8.615850e-47 |
| Msa0081520 | Msa1346560 | 0.811468 | 6.895566e-51 | -8.615850e-47 |
| Msa0094780 | Msa1346560 | 0.825138 | 5.519836e-54 | -8.615850e-47 |
| Msa0098040 | Msa1346560 | 0.837508 | 4.987818e-57 | -8.615850e-47 |
| Msa0108410 | Msa1346560 | 0.800966 | 1.124375e-48 | -8.615850e-47 |
| Msa0120400 | Msa1346560 | 0.802167 | 6.379568e-49 | -8.615850e-47 |
| Msa1346560 | Msa1347740 | 0.800650 | 1.304838e-48 | -8.615850e-47 |
| Msa1346560 | Msa1356600 | -0.803248 | 3.815955e-49 | -8.615850e-47 |
| Msa1346560 | Msa1359690 | 0.809668 | 1.688676e-50 | -8.615850e-47 |
| Msa1346560 | Msa1372040 | 0.825425 | 4.720388e-54 | -8.615850e-47 |
| Msa1346560 | Msa1382300 | 0.815129 | 1.082910e-51 | -8.615850e-47 |
| Msa1346560 | Msa1387620 | 0.810546 | 1.092255e-50 | -8.615850e-47 |
| Msa1346560 | Msa1392580 | 0.826851 | 2.162302e-54 | -8.615850e-47 |
| Msa1346560 | Msa1397400 | 0.818406 | 1.993094e-52 | -8.615850e-47 |
| Msa1346560 | Msa1405460 | 0.832154 | 1.111620e-55 | -8.615850e-47 |
| Msa1346560 | Msa1412000 | 0.810199 | 1.297938e-50 | -8.615850e-47 |
| Msa1346560 | Msa1415540 | 0.807886 | 4.059272e-50 | -8.615850e-47 |
| Msa1346560 | Msa1425880 | 0.803838 | 2.879112e-49 | -8.615850e-47 |
| Msa1346560 | Msa1427100 | 0.811952 | 5.411889e-51 | -8.615850e-47 |
| Msa1346560 | Msa1432500 | 0.833057 | 6.637435e-56 | -8.615850e-47 |
| Msa1346560 | Msa1440960 | 0.822140 | 2.778200e-53 | -8.615850e-47 |
| Msa1346560 | Msa1449480 | 0.809975 | 1.450412e-50 | -8.615850e-47 |
| Msa0611210 | Msa1346560 | 0.853509 | 2.279489e-61 | -8.615850e-47 |
| Msa0624420 | Msa1346560 | 0.811208 | 7.852712e-51 | -8.615850e-47 |
| Msa0626450 | Msa1346560 | 0.829888 | 4.001204e-55 | -8.615850e-47 |
| Msa0626490 | Msa1346560 | 0.827082 | 1.903520e-54 | -8.615850e-47 |
| Msa0644410 | Msa1346560 | 0.802880 | 4.546730e-49 | -8.615850e-47 |
| Msa0651550 | Msa1346560 | 0.847039 | 1.488018e-59 | -8.615850e-47 |
| Msa0652770 | Msa1346560 | 0.805425 | 1.343069e-49 | -8.615850e-47 |
| Msa0658640 | Msa1346560 | 0.817826 | 2.696081e-52 | -8.615850e-47 |
| Msa0664600 | Msa1346560 | 0.828529 | 8.548779e-55 | -8.615850e-47 |
| Msa0675330 | Msa1346560 | 0.804551 | 2.045879e-49 | -8.615850e-47 |
| Msa0693330 | Msa1346560 | 0.836209 | 1.070050e-56 | -8.615850e-47 |
| Msa0693890 | Msa1346560 | 0.804051 | 2.600892e-49 | -8.615850e-47 |
| Msa0702720 | Msa1346560 | 0.807909 | 4.013734e-50 | -8.615850e-47 |
| Msa0706230 | Msa1346560 | 0.804217 | 2.401505e-49 | -8.615850e-47 |
| Msa0715060 | Msa1346560 | 0.819379 | 1.198137e-52 | -8.615850e-47 |
| Msa0721080 | Msa1346560 | 0.817745 | 2.812467e-52 | -8.615850e-47 |
| Msa0725770 | Msa1346560 | 0.819940 | 8.917266e-53 | -8.615850e-47 |
| Msa0727640 | Msa1346560 | 0.818409 | 1.989942e-52 | -8.615850e-47 |
| Msa0729270 | Msa1346560 | 0.811369 | 7.247437e-51 | -8.615850e-47 |
| Msa0735780 | Msa1346560 | 0.813572 | 2.391711e-51 | -8.615850e-47 |
| Msa0738700 | Msa1346560 | 0.804576 | 2.021343e-49 | -8.615850e-47 |
| Msa0741220 | Msa1346560 | 0.849198 | 3.771542e-60 | -8.615850e-47 |
| Msa0752450 | Msa1346560 | 0.808956 | 2.399877e-50 | -8.615850e-47 |
| Msa0768990 | Msa1346560 | 0.817265 | 3.606498e-52 | -8.615850e-47 |
| Msa0770330 | Msa1346560 | 0.830599 | 2.681732e-55 | -8.615850e-47 |
| Msa0792370 | Msa1346560 | 0.823592 | 1.275065e-53 | -8.615850e-47 |
| Msa0795870 | Msa1346560 | 0.850155 | 2.038321e-60 | -8.615850e-47 |
| Msa0805330 | Msa1346560 | 0.818796 | 1.625992e-52 | -8.615850e-47 |
| Msa0819170 | Msa1346560 | 0.822653 | 2.111391e-53 | -8.615850e-47 |
| Msa0823820 | Msa1346560 | 0.802537 | 5.353593e-49 | -8.615850e-47 |
| Msa0829300 | Msa1346560 | 0.845347 | 4.299346e-59 | -8.615850e-47 |
| Msa0829330 | Msa1346560 | 0.846724 | 1.814926e-59 | -8.615850e-47 |
| Msa0833530 | Msa1346560 | 0.823958 | 1.046259e-53 | -8.615850e-47 |
| Msa0833650 | Msa1346560 | 0.857461 | 1.607253e-62 | -8.615850e-47 |
| Msa0835490 | Msa1346560 | 0.810336 | 1.212476e-50 | -8.615850e-47 |
| Msa0123340 | Msa1346560 | 0.810118 | 1.350930e-50 | -8.615850e-47 |
| Msa0125360 | Msa1346560 | 0.811421 | 7.060852e-51 | -8.615850e-47 |
| Msa0136650 | Msa1346560 | 0.834130 | 3.580179e-56 | -8.615850e-47 |
| Msa0174450 | Msa1346560 | 0.831335 | 1.769403e-55 | -8.615850e-47 |
| Msa0213030 | Msa1346560 | 0.807318 | 5.359065e-50 | -8.615850e-47 |
| Msa0221000 | Msa1346560 | 0.833756 | 4.442745e-56 | -8.615850e-47 |
| Msa0225100 | Msa1346560 | 0.841942 | 3.499174e-58 | -8.615850e-47 |
| Msa0225860 | Msa1346560 | 0.839094 | 1.945795e-57 | -8.615850e-47 |
| Msa1225860 | Msa1346560 | -0.853281 | 2.649978e-61 | -8.615850e-47 |
| Msa1226520 | Msa1346560 | 0.812769 | 3.588509e-51 | -8.615850e-47 |
| Msa1228200 | Msa1346560 | 0.811623 | 6.381697e-51 | -8.615850e-47 |
| Msa1236410 | Msa1346560 | 0.808529 | 2.960945e-50 | -8.615850e-47 |
| Msa1263490 | Msa1346560 | 0.814364 | 1.599445e-51 | -8.615850e-47 |
| Msa1265650 | Msa1346560 | 0.823640 | 1.242159e-53 | -8.615850e-47 |
| Msa1268240 | Msa1346560 | 0.811494 | 6.807396e-51 | -8.615850e-47 |
| Msa1277220 | Msa1346560 | 0.815109 | 1.094147e-51 | -8.615850e-47 |
| Msa1277640 | Msa1346560 | 0.807419 | 5.102514e-50 | -8.615850e-47 |
| Msa1297230 | Msa1346560 | 0.836383 | 9.665906e-57 | -8.615850e-47 |
| Msa1303560 | Msa1346560 | 0.827436 | 1.566415e-54 | -8.615850e-47 |
| Msa1303650 | Msa1346560 | 0.825188 | 5.370113e-54 | -8.615850e-47 |
| Msa1314650 | Msa1346560 | 0.806077 | 9.798024e-50 | -8.615850e-47 |
| Msa1315590 | Msa1346560 | 0.805789 | 1.126699e-49 | -8.615850e-47 |
| Msa1316330 | Msa1346560 | 0.828786 | 7.407509e-55 | -8.615850e-47 |
| Msa1320670 | Msa1346560 | 0.814678 | 1.363608e-51 | -8.615850e-47 |
| Msa1330420 | Msa1346560 | 0.814959 | 1.181355e-51 | -8.615850e-47 |
| Msa1341840 | Msa1346560 | 0.812879 | 3.395009e-51 | -8.615850e-47 |
| Msa1343180 | Msa1346560 | 0.800848 | 1.188879e-48 | -8.615850e-47 |
| Msa1343430 | Msa1346560 | 0.815201 | 1.043729e-51 | -8.615850e-47 |
| Msa0367870 | Msa1346560 | 0.809234 | 2.092571e-50 | -8.615850e-47 |
| Msa0369790 | Msa1346560 | 0.821719 | 3.477047e-53 | -8.615850e-47 |
| Msa0378720 | Msa1346560 | 0.844788 | 6.086099e-59 | -8.615850e-47 |
| Msa0380620 | Msa1346560 | 0.831330 | 1.774541e-55 | -8.615850e-47 |
| Msa0405680 | Msa1346560 | 0.801809 | 7.555900e-49 | -8.615850e-47 |
| Msa0424160 | Msa1346560 | 0.800370 | 1.488155e-48 | -8.615850e-47 |
| Msa0428370 | Msa1346560 | 0.833566 | 4.953676e-56 | -8.615850e-47 |
| Msa0428920 | Msa1346560 | 0.810980 | 8.801404e-51 | -8.615850e-47 |
| Msa0430260 | Msa1346560 | 0.832459 | 9.341165e-56 | -8.615850e-47 |
| Msa0430300 | Msa1346560 | 0.800117 | 1.675050e-48 | -8.615850e-47 |
| Msa0436910 | Msa1346560 | 0.821086 | 4.867885e-53 | -8.615850e-47 |
| Msa0450400 | Msa1346560 | -0.805862 | 1.087661e-49 | -8.615850e-47 |
| Msa0453040 | Msa1346560 | 0.808034 | 3.776504e-50 | -8.615850e-47 |
| Msa0464000 | Msa1346560 | 0.818545 | 1.853706e-52 | -8.615850e-47 |
| Msa0474730 | Msa1346560 | 0.842910 | 1.937482e-58 | -8.615850e-47 |
| Msa1000920 | Msa1346560 | 0.815307 | 9.886545e-52 | -8.615850e-47 |
| Msa1020510 | Msa1346560 | 0.815964 | 7.057760e-52 | -8.615850e-47 |
| Msa1021590 | Msa1346560 | 0.802110 | 6.553707e-49 | -8.615850e-47 |
| Msa1041710 | Msa1346560 | 0.817920 | 2.566722e-52 | -8.615850e-47 |
| Msa1042160 | Msa1346560 | 0.815943 | 7.135545e-52 | -8.615850e-47 |
| Msa1042190 | Msa1346560 | 0.813660 | 2.287413e-51 | -8.615850e-47 |
| Msa1043370 | Msa1346560 | 0.857460 | 1.607816e-62 | -8.615850e-47 |
| Msa1044680 | Msa1346560 | 0.836377 | 9.699524e-57 | -8.615850e-47 |
| Msa1072940 | Msa1346560 | 0.820894 | 5.387498e-53 | -8.615850e-47 |
| Msa1074220 | Msa1346560 | 0.806820 | 6.832650e-50 | -8.615850e-47 |
| Msa1080000 | Msa1346560 | 0.801683 | 8.020862e-49 | -8.615850e-47 |
| Msa1096960 | Msa1346560 | 0.820789 | 5.695488e-53 | -8.615850e-47 |
| Msa1105640 | Msa1346560 | 0.806730 | 7.137880e-50 | -8.615850e-47 |
| Msa0240900 | Msa1346560 | 0.803014 | 4.266329e-49 | -8.615850e-47 |
| Msa0244640 | Msa1346560 | 0.871242 | 7.935608e-67 | -8.615850e-47 |
| Msa0260510 | Msa1346560 | 0.809943 | 1.473685e-50 | -8.615850e-47 |
| Msa0261170 | Msa1346560 | 0.800008 | 1.762952e-48 | -8.615850e-47 |
| Msa0265850 | Msa1346560 | 0.810358 | 1.199565e-50 | -8.615850e-47 |
| Msa0266180 | Msa1346560 | 0.835410 | 1.705699e-56 | -8.615850e-47 |
| Msa0267110 | Msa1346560 | 0.801124 | 1.044076e-48 | -8.615850e-47 |
| Msa0283330 | Msa1346560 | 0.868425 | 6.593928e-66 | -8.615850e-47 |
| Msa0287740 | Msa1346560 | 0.830562 | 2.738438e-55 | -8.615850e-47 |
| Msa0300270 | Msa1346560 | 0.804554 | 2.043290e-49 | -8.615850e-47 |
| Msa0300320 | Msa1346560 | 0.809166 | 2.164260e-50 | -8.615850e-47 |
| Msa0307270 | Msa1346560 | 0.830533 | 2.784062e-55 | -8.615850e-47 |
| Msa0307670 | Msa1346560 | 0.831874 | 1.302990e-55 | -8.615850e-47 |
| Msa0321620 | Msa1346560 | 0.861342 | 1.097778e-63 | -8.615850e-47 |
| Msa0330380 | Msa1346560 | 0.811636 | 6.341361e-51 | -8.615850e-47 |
| Msa0337700 | Msa1346560 | 0.826396 | 2.775785e-54 | -8.615850e-47 |
| Msa0340500 | Msa1346560 | 0.826771 | 2.259551e-54 | -8.615850e-47 |
| Msa0341690 | Msa1346560 | 0.806962 | 6.374265e-50 | -8.615850e-47 |
| Msa1132840 | Msa1346560 | 0.851289 | 9.776823e-61 | -8.615850e-47 |
| Msa1133680 | Msa1346560 | 0.809918 | 1.492427e-50 | -8.615850e-47 |
| Msa1155170 | Msa1346560 | -0.849732 | 2.676195e-60 | -8.615850e-47 |
| Msa1160920 | Msa1346560 | 0.828128 | 1.067803e-54 | -8.615850e-47 |
| Msa1162770 | Msa1346560 | 0.814745 | 1.317520e-51 | -8.615850e-47 |
| Msa1163100 | Msa1346560 | 0.806383 | 8.449947e-50 | -8.615850e-47 |
| Msa1167470 | Msa1346560 | 0.803256 | 3.802269e-49 | -8.615850e-47 |
| Msa1186020 | Msa1346560 | 0.817949 | 2.529454e-52 | -8.615850e-47 |
| Msa1200890 | Msa1346560 | 0.810581 | 1.073583e-50 | -8.615850e-47 |
| Msa1205280 | Msa1346560 | 0.801226 | 9.951690e-49 | -8.615850e-47 |
| Msa1208950 | Msa1346560 | 0.807475 | 4.962975e-50 | -8.615850e-47 |
| Msa1216110 | Msa1346560 | 0.802148 | 6.436944e-49 | -8.615850e-47 |
| Msa0483100 | Msa1346560 | 0.815607 | 8.478566e-52 | -8.615850e-47 |
| Msa0500380 | Msa1346560 | 0.813382 | 2.633232e-51 | -8.615850e-47 |
| Msa0509550 | Msa1346560 | 0.815317 | 9.835304e-52 | -8.615850e-47 |
| Msa0519750 | Msa1346560 | 0.826555 | 2.543749e-54 | -8.615850e-47 |
| Msa0519820 | Msa1346560 | 0.829240 | 5.751013e-55 | -8.615850e-47 |
| Msa0519830 | Msa1346560 | 0.832382 | 9.758090e-56 | -8.615850e-47 |
| Msa0528570 | Msa1346560 | 0.821140 | 4.729473e-53 | -8.615850e-47 |
| Msa0529030 | Msa1346560 | 0.834215 | 3.408856e-56 | -8.615850e-47 |
| Msa0530780 | Msa1346560 | 0.823792 | 1.144233e-53 | -8.615850e-47 |
| Msa0548470 | Msa1346560 | 0.803929 | 2.757360e-49 | -8.615850e-47 |
| Msa0555860 | Msa1346560 | -0.821218 | 4.537521e-53 | -8.615850e-47 |
| Msa0557460 | Msa1346560 | 0.812778 | 3.572592e-51 | -8.615850e-47 |
| Msa0580370 | Msa1346560 | 0.854277 | 1.370234e-61 | -8.615850e-47 |
| Msa0581470 | Msa1346560 | 0.813268 | 2.789250e-51 | -8.615850e-47 |
| Msa0583360 | Msa1346560 | -0.855063 | 8.110969e-62 | -8.615850e-47 |
| Msa0587620 | Msa1346560 | 0.814739 | 1.321597e-51 | -8.615850e-47 |
| Msa0597270 | Msa1346560 | 0.830647 | 2.611026e-55 | -8.615850e-47 |
| Msa0597790 | Msa1346560 | 0.816973 | 4.194943e-52 | -8.615850e-47 |
| Msa0600930 | Msa1346560 | 0.807855 | 4.121314e-50 | -8.615850e-47 |
| Msa0855870 | Msa1346560 | 0.805036 | 1.620197e-49 | -8.615850e-47 |
| Msa0859290 | Msa1346560 | 0.809763 | 1.611482e-50 | -8.615850e-47 |
| Msa0894790 | Msa1346560 | 0.839017 | 2.037843e-57 | -8.615850e-47 |
| Msa0945190 | Msa1346560 | 0.808716 | 2.701751e-50 | -8.615850e-47 |
| Msa0967380 | Msa1346560 | 0.817231 | 3.671838e-52 | -8.615850e-47 |
| Msa0967870 | Msa1346560 | 0.829621 | 4.646044e-55 | -8.615850e-47 |
| Msa0979180 | Msa1346560 | 0.815700 | 8.084233e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346560 | MtrunA17_Chr4g0021561 | 96.875 | 256 | 8 | 0 | 1 | 256 | 1 | 256 | 0.0 | 521 |
| Msa1346560 | MtrunA17_Chr5g0433841 | 60.177 | 226 | 89 | 1 | 31 | 256 | 40 | 264 | 3.23e-98 | 288 |
| Msa1346560 | MtrunA17_Chr7g0238681 | 50.435 | 230 | 114 | 0 | 27 | 256 | 27 | 256 | 1.11e-87 | 261 |
| Msa1346560 | MtrunA17_Chr5g0435311 | 51.304 | 230 | 112 | 0 | 27 | 256 | 77 | 306 | 2.52e-87 | 261 |
| Msa1346560 | MtrunA17_Chr2g0324191 | 75.000 | 152 | 37 | 1 | 6 | 156 | 1 | 152 | 2.96e-87 | 256 |
| Msa1346560 | MtrunA17_Chr5g0432611 | 48.996 | 249 | 125 | 1 | 8 | 256 | 5 | 251 | 4.75e-87 | 259 |
| Msa1346560 | MtrunA17_Chr2g0328261 | 50.435 | 230 | 114 | 0 | 27 | 256 | 29 | 258 | 1.25e-86 | 258 |
| Msa1346560 | MtrunA17_Chr3g0128801 | 50.000 | 246 | 121 | 1 | 11 | 256 | 10 | 253 | 3.81e-86 | 256 |
| Msa1346560 | MtrunA17_Chr3g0109801 | 55.932 | 236 | 91 | 6 | 31 | 256 | 52 | 284 | 5.78e-86 | 257 |
| Msa1346560 | MtrunA17_Chr5g0417701 | 50.000 | 244 | 120 | 1 | 13 | 256 | 6 | 247 | 1.63e-85 | 255 |
| Msa1346560 | MtrunA17_Chr3g0092071 | 52.632 | 228 | 106 | 1 | 29 | 256 | 22 | 247 | 2.66e-85 | 254 |
| Msa1346560 | MtrunA17_Chr4g0042521 | 50.410 | 244 | 119 | 1 | 13 | 256 | 6 | 247 | 2.78e-85 | 254 |
| Msa1346560 | MtrunA17_Chr3g0128791 | 52.889 | 225 | 104 | 1 | 32 | 256 | 31 | 253 | 3.98e-85 | 254 |
| Msa1346560 | MtrunA17_Chr7g0218751 | 49.794 | 243 | 117 | 2 | 12 | 254 | 11 | 248 | 2.13e-84 | 252 |
| Msa1346560 | MtrunA17_Chr3g0107311 | 53.778 | 225 | 102 | 1 | 32 | 256 | 32 | 254 | 6.01e-84 | 251 |
| Msa1346560 | MtrunA17_Chr4g0031621 | 48.438 | 256 | 124 | 2 | 9 | 256 | 1 | 256 | 7.98e-84 | 251 |
| Msa1346560 | MtrunA17_Chr3g0107291 | 53.333 | 225 | 103 | 1 | 32 | 256 | 38 | 260 | 4.13e-83 | 249 |
| Msa1346560 | MtrunA17_Chr7g0217661 | 48.387 | 248 | 113 | 3 | 14 | 256 | 3 | 240 | 4.75e-80 | 241 |
| Msa1346560 | MtrunA17_Chr8g0360041 | 46.640 | 253 | 132 | 2 | 1 | 253 | 1 | 250 | 9.20e-80 | 240 |
| Msa1346560 | MtrunA17_Chr7g0218741 | 51.316 | 228 | 108 | 2 | 29 | 255 | 26 | 251 | 2.18e-77 | 234 |
| Msa1346560 | MtrunA17_Chr4g0069711 | 50.667 | 225 | 108 | 2 | 32 | 255 | 61 | 283 | 5.75e-77 | 234 |
| Msa1346560 | MtrunA17_Chr7g0218761 | 52.683 | 205 | 95 | 1 | 50 | 254 | 7 | 209 | 1.54e-76 | 231 |
| Msa1346560 | MtrunA17_Chr1g0193631 | 49.356 | 233 | 114 | 3 | 25 | 254 | 23 | 254 | 3.61e-76 | 231 |
| Msa1346560 | MtrunA17_Chr7g0271001 | 46.559 | 247 | 124 | 4 | 13 | 252 | 4 | 249 | 5.81e-75 | 228 |
| Msa1346560 | MtrunA17_Chr6g0453341 | 48.606 | 251 | 114 | 3 | 11 | 256 | 12 | 252 | 1.20e-72 | 222 |
| Msa1346560 | MtrunA17_Chr8g0360721 | 51.724 | 203 | 96 | 1 | 50 | 252 | 16 | 216 | 2.27e-72 | 220 |
| Msa1346560 | MtrunA17_Chr5g0398271 | 41.532 | 248 | 143 | 2 | 8 | 254 | 13 | 259 | 1.71e-67 | 209 |
| Msa1346560 | MtrunA17_Chr4g0057091 | 43.983 | 241 | 133 | 2 | 13 | 252 | 17 | 256 | 2.71e-67 | 209 |
| Msa1346560 | MtrunA17_Chr1g0157061 | 44.495 | 218 | 116 | 3 | 39 | 254 | 24 | 238 | 1.13e-66 | 207 |
| Msa1346560 | MtrunA17_Chr2g0324181 | 86.139 | 101 | 14 | 0 | 156 | 256 | 17 | 117 | 1.05e-61 | 189 |
| Msa1346560 | MtrunA17_Chr4g0022841 | 51.304 | 115 | 56 | 0 | 139 | 253 | 2 | 116 | 1.96e-36 | 125 |
| Msa1346560 | MtrunA17_Chr2g0324221 | 31.429 | 245 | 140 | 9 | 23 | 254 | 26 | 255 | 8.34e-30 | 112 |
| Msa1346560 | MtrunA17_Chr4g0022851 | 42.636 | 129 | 70 | 2 | 1 | 129 | 1 | 125 | 6.97e-29 | 106 |
| Msa1346560 | MtrunA17_Chr2g0324201 | 30.962 | 239 | 137 | 10 | 29 | 254 | 30 | 253 | 7.24e-28 | 107 |
| Msa1346560 | MtrunA17_Chr4g0021641 | 32.353 | 238 | 135 | 9 | 29 | 254 | 38 | 261 | 8.83e-28 | 107 |
| Msa1346560 | MtrunA17_Chr4g0012801 | 31.933 | 238 | 131 | 10 | 29 | 252 | 39 | 259 | 7.03e-25 | 99.8 |
| Msa1346560 | MtrunA17_Chr8g0359971 | 53.947 | 76 | 34 | 1 | 178 | 252 | 2 | 77 | 1.00e-21 | 86.3 |
| Msa1346560 | MtrunA17_Chr8g0359981 | 39.683 | 126 | 49 | 5 | 73 | 195 | 1 | 102 | 1.44e-20 | 84.3 |
| Msa1346560 | MtrunA17_Chr7g0231221 | 29.130 | 230 | 135 | 11 | 37 | 251 | 53 | 269 | 5.73e-19 | 84.0 |
| Msa1346560 | MtrunA17_Chr5g0399811 | 28.194 | 227 | 146 | 9 | 35 | 254 | 32 | 248 | 1.14e-13 | 68.9 |
| Msa1346560 | MtrunA17_Chr4g0055601 | 26.336 | 262 | 155 | 10 | 10 | 254 | 8 | 248 | 1.64e-13 | 68.2 |
| Msa1346560 | MtrunA17_Chr4g0038741 | 26.106 | 226 | 132 | 10 | 43 | 252 | 32 | 238 | 3.01e-12 | 64.7 |
| Msa1346560 | MtrunA17_Chr1g0193571 | 50.909 | 55 | 27 | 0 | 200 | 254 | 3 | 57 | 4.94e-12 | 60.1 |
| Msa1346560 | MtrunA17_Chr4g0055561 | 25.664 | 226 | 151 | 8 | 34 | 252 | 30 | 245 | 3.03e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346560 | AT4G38210.1 | 65.306 | 245 | 81 | 2 | 14 | 256 | 12 | 254 | 2.62e-119 | 341 |
| Msa1346560 | AT3G03220.1 | 57.522 | 226 | 95 | 1 | 31 | 256 | 39 | 263 | 1.63e-93 | 276 |
| Msa1346560 | AT2G39700.1 | 48.413 | 252 | 130 | 0 | 5 | 256 | 4 | 255 | 1.07e-89 | 266 |
| Msa1346560 | AT3G55500.1 | 50.602 | 249 | 119 | 1 | 12 | 256 | 10 | 258 | 2.51e-89 | 265 |
| Msa1346560 | AT5G02260.1 | 47.600 | 250 | 126 | 1 | 12 | 256 | 7 | 256 | 3.12e-88 | 262 |
| Msa1346560 | AT2G37640.1 | 49.402 | 251 | 119 | 1 | 14 | 256 | 10 | 260 | 5.76e-88 | 262 |
| Msa1346560 | AT5G05290.1 | 51.271 | 236 | 112 | 2 | 22 | 256 | 22 | 255 | 1.11e-85 | 256 |
| Msa1346560 | AT2G03090.1 | 49.609 | 256 | 125 | 3 | 1 | 256 | 1 | 252 | 3.08e-85 | 254 |
| Msa1346560 | AT2G40610.1 | 50.201 | 249 | 121 | 3 | 9 | 256 | 7 | 253 | 2.53e-84 | 252 |
| Msa1346560 | AT1G69530.2 | 50.202 | 247 | 119 | 2 | 12 | 256 | 5 | 249 | 5.48e-84 | 251 |
| Msa1346560 | AT1G69530.1 | 50.202 | 247 | 119 | 2 | 12 | 256 | 5 | 249 | 5.48e-84 | 251 |
| Msa1346560 | AT5G56320.1 | 48.560 | 243 | 123 | 1 | 14 | 256 | 11 | 251 | 6.39e-84 | 251 |
| Msa1346560 | AT5G56320.2 | 48.560 | 243 | 123 | 1 | 14 | 256 | 11 | 251 | 6.39e-84 | 251 |
| Msa1346560 | AT2G37640.2 | 53.810 | 210 | 97 | 0 | 47 | 256 | 26 | 235 | 8.38e-84 | 250 |
| Msa1346560 | AT5G56320.3 | 48.560 | 243 | 123 | 1 | 14 | 256 | 11 | 251 | 2.73e-83 | 251 |
| Msa1346560 | AT1G69530.3 | 50.413 | 242 | 116 | 2 | 12 | 251 | 5 | 244 | 3.81e-82 | 248 |
| Msa1346560 | AT2G28950.1 | 46.667 | 255 | 135 | 1 | 3 | 256 | 1 | 255 | 1.71e-81 | 245 |
| Msa1346560 | AT5G39280.1 | 51.327 | 226 | 106 | 2 | 29 | 254 | 51 | 272 | 8.98e-79 | 239 |
| Msa1346560 | AT5G39300.1 | 50.442 | 226 | 108 | 2 | 29 | 254 | 52 | 273 | 9.83e-78 | 236 |
| Msa1346560 | AT5G39270.1 | 50.885 | 226 | 107 | 2 | 29 | 254 | 55 | 276 | 5.46e-77 | 234 |
| Msa1346560 | AT5G39290.1 | 50.442 | 226 | 108 | 2 | 29 | 254 | 55 | 276 | 2.98e-76 | 233 |
| Msa1346560 | AT1G26770.1 | 48.207 | 251 | 127 | 2 | 6 | 256 | 1 | 248 | 5.07e-76 | 231 |
| Msa1346560 | AT1G26770.2 | 48.016 | 252 | 128 | 2 | 5 | 256 | 10 | 258 | 5.73e-76 | 231 |
| Msa1346560 | AT3G29030.1 | 46.768 | 263 | 118 | 5 | 6 | 256 | 1 | 253 | 1.30e-75 | 230 |
| Msa1346560 | AT1G62980.1 | 43.621 | 243 | 135 | 2 | 13 | 254 | 12 | 253 | 9.99e-74 | 226 |
| Msa1346560 | AT5G39260.1 | 43.922 | 255 | 128 | 4 | 6 | 254 | 14 | 259 | 3.38e-70 | 217 |
| Msa1346560 | AT4G01630.1 | 46.875 | 224 | 115 | 3 | 32 | 252 | 28 | 250 | 4.89e-70 | 216 |
| Msa1346560 | AT5G39310.1 | 48.661 | 224 | 110 | 3 | 32 | 254 | 90 | 309 | 1.44e-69 | 217 |
| Msa1346560 | AT1G20190.1 | 43.966 | 232 | 125 | 3 | 24 | 252 | 18 | 247 | 2.95e-69 | 214 |
| Msa1346560 | AT1G69530.4 | 44.130 | 247 | 104 | 3 | 12 | 256 | 5 | 219 | 1.63e-68 | 211 |
| Msa1346560 | AT1G69530.5 | 49.510 | 204 | 99 | 2 | 12 | 213 | 5 | 206 | 2.63e-67 | 209 |
| Msa1346560 | AT1G12560.1 | 43.443 | 244 | 133 | 4 | 12 | 252 | 15 | 256 | 4.35e-67 | 209 |
| Msa1346560 | AT3G15370.1 | 44.358 | 257 | 131 | 6 | 6 | 256 | 1 | 251 | 3.97e-66 | 206 |
| Msa1346560 | AT3G15370.2 | 40.767 | 287 | 128 | 8 | 6 | 256 | 1 | 281 | 2.27e-61 | 195 |
| Msa1346560 | AT1G20190.2 | 46.032 | 189 | 97 | 3 | 67 | 252 | 2 | 188 | 5.82e-59 | 186 |
| Msa1346560 | AT4G28250.1 | 32.365 | 241 | 132 | 11 | 29 | 254 | 33 | 257 | 2.87e-24 | 98.2 |
| Msa1346560 | AT2G20750.1 | 32.669 | 251 | 141 | 11 | 18 | 254 | 28 | 264 | 1.57e-23 | 96.7 |
| Msa1346560 | AT1G65680.1 | 29.839 | 248 | 143 | 9 | 22 | 252 | 35 | 268 | 2.13e-23 | 96.3 |
| Msa1346560 | AT4G28250.2 | 32.083 | 240 | 128 | 11 | 29 | 254 | 33 | 251 | 2.90e-22 | 92.8 |
| Msa1346560 | AT2G45110.1 | 30.172 | 232 | 135 | 11 | 35 | 252 | 36 | 254 | 8.00e-18 | 80.9 |
| Msa1346560 | AT1G65681.1 | 28.636 | 220 | 132 | 9 | 45 | 252 | 11 | 217 | 3.16e-17 | 78.6 |
| Msa1346560 | AT3G60570.1 | 25.483 | 259 | 159 | 10 | 15 | 254 | 11 | 254 | 1.24e-14 | 72.0 |
| Msa1346560 | AT2G20750.2 | 32.804 | 189 | 103 | 8 | 18 | 195 | 28 | 203 | 3.02e-14 | 70.1 |
| Msa1346560 | AT3G60570.2 | 25.792 | 221 | 136 | 9 | 47 | 254 | 1 | 206 | 2.57e-11 | 62.0 |
| Msa1346560 | AT4G17030.1 | 25.969 | 258 | 151 | 11 | 13 | 252 | 9 | 244 | 2.65e-11 | 62.4 |
Find 75 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTCTGTCCTCCTAATTT+TGG | 0.175976 | tig0009029:-6515 | Msa1346560:CDS |
| CAAGAAAAGTACCTGTAATT+AGG | 0.187865 | tig0009029:+6896 | Msa1346560:intergenic |
| GCACCTCCAAACTGGCAATT+TGG | 0.255098 | tig0009029:-5717 | Msa1346560:CDS |
| TAGGGATCCTTCTGTGTCTT+TGG | 0.259292 | tig0009029:+6915 | Msa1346560:intergenic |
| TTTGGTCTCTCAGTTGATTA+TGG | 0.289936 | tig0009029:-6497 | Msa1346560:CDS |
| CTTATACAAATTATGATTCA+TGG | 0.302357 | tig0009029:-5625 | Msa1346560:three_prime_UTR |
| GGATACCAATGGCAAGGAAT+TGG | 0.318465 | tig0009029:-5836 | Msa1346560:CDS |
| GTTTGTCCAAATTGCCAGTT+TGG | 0.334344 | tig0009029:+5711 | Msa1346560:intergenic |
| TGTCATTCATATATGTAAAC+AGG | 0.335548 | tig0009029:-5654 | Msa1346560:three_prime_UTR |
| CTAAATGCTGTTATCTAAGA+TGG | 0.344241 | tig0009029:-7037 | Msa1346560:exon |
| TCAACTGAGAGACCAAAATT+AGG | 0.348503 | tig0009029:+6503 | Msa1346560:intergenic |
| GATACCAATGGCAAGGAATT+GGG | 0.350848 | tig0009029:-5835 | Msa1346560:CDS |
| ACATCAGCCTTTGTCCTTTG+AGG | 0.354377 | tig0009029:-5781 | Msa1346560:CDS |
| GACAACTCAAAATGTTCTCT+TGG | 0.372662 | tig0009029:+6458 | Msa1346560:intergenic |
| GCAGAAGGAGCTTGTGGTTA+TGG | 0.372980 | tig0009029:-6695 | Msa1346560:intron |
| AAGAAAAGTACCTGTAATTA+GGG | 0.377560 | tig0009029:+6897 | Msa1346560:intergenic |
| TTGGAGTACCCGGGCTTCAT+AGG | 0.385600 | tig0009029:+5421 | Msa1346560:intergenic |
| TTATTCCCGTTCAATATAGA+AGG | 0.389617 | tig0009029:-6394 | Msa1346560:intron |
| CAATTTGGACAAACATTTGA+AGG | 0.398107 | tig0009029:-5702 | Msa1346560:CDS |
| TTGCTTACAAAGATCAAGAA+TGG | 0.419745 | tig0009029:-6960 | Msa1346560:CDS |
| CAAGGAATTGGGGAATGAAT+TGG | 0.429950 | tig0009029:-5824 | Msa1346560:CDS |
| ATCTACCTTCTATATTGAAC+GGG | 0.431748 | tig0009029:+6389 | Msa1346560:intergenic |
| CAAGCATACACCACAAGATA+TGG | 0.436575 | tig0009029:+6567 | Msa1346560:intergenic |
| ATAACTAATGTGGGGTTAGA+TGG | 0.442300 | tig0009029:-5900 | Msa1346560:CDS |
| ACAATGTAGCACCTCCAAAC+TGG | 0.451802 | tig0009029:-5725 | Msa1346560:CDS |
| ACAGAAGGATCCCTAATTAC+AGG | 0.458393 | tig0009029:-6907 | Msa1346560:intron |
| GTTATATAAAATTGAGCCAA+TGG | 0.479724 | tig0009029:-5509 | Msa1346560:three_prime_UTR |
| GAGGCAATGATGCTAGGAAA+AGG | 0.499306 | tig0009029:+7128 | Msa1346560:intergenic |
| CTTTGTGTTGTGCATACCAT+TGG | 0.500105 | tig0009029:+5493 | Msa1346560:intergenic |
| ATTCCCCAATTCCTTGCCAT+TGG | 0.501334 | tig0009029:+5831 | Msa1346560:intergenic |
| AATTATGATTCATGGAATCA+TGG | 0.502165 | tig0009029:-5617 | Msa1346560:three_prime_UTR |
| AAAGTGAAGGGATCTAGAAC+AGG | 0.502893 | tig0009029:-5861 | Msa1346560:CDS |
| TGCATTTGCTGAAATTGCTA+AGG | 0.506123 | tig0009029:-6429 | Msa1346560:CDS |
| TCTCAGTTGATTATGGTGGT+TGG | 0.506701 | tig0009029:-6490 | Msa1346560:CDS |
| CAAGTTCTGATAACTAATGT+GGG | 0.508543 | tig0009029:-5909 | Msa1346560:CDS |
| TCAAGTTCTGATAACTAATG+TGG | 0.509065 | tig0009029:-5910 | Msa1346560:CDS |
| TAAATGCTGTTATCTAAGAT+GGG | 0.517060 | tig0009029:-7036 | Msa1346560:CDS |
| AGGACAAAGGCTGATGTTGA+AGG | 0.517191 | tig0009029:+5787 | Msa1346560:intergenic |
| GATCTTCACAAAGCTAGCTA+TGG | 0.521811 | tig0009029:-6671 | Msa1346560:CDS |
| CATATCTTGTGGTGTATGCT+TGG | 0.525681 | tig0009029:-6566 | Msa1346560:CDS |
| GTCTTTGGCATAAGTTGCAG+TGG | 0.528308 | tig0009029:+6930 | Msa1346560:intergenic |
| TATCTACCTTCTATATTGAA+CGG | 0.536318 | tig0009029:+6388 | Msa1346560:intergenic |
| TGTCCAAATTGCCAGTTTGG+AGG | 0.539604 | tig0009029:+5714 | Msa1346560:intergenic |
| GTGAAGTGTGAAAGAAGTGG+AGG | 0.540916 | tig0009029:-5969 | Msa1346560:CDS |
| GCATTTGCTGAAATTGCTAA+GGG | 0.541056 | tig0009029:-6428 | Msa1346560:CDS |
| TTTGAGGTAACTAGCAGCAC+TGG | 0.546125 | tig0009029:-5765 | Msa1346560:CDS |
| CATATGTGGATCTTTAAGCT+AGG | 0.549230 | tig0009029:-7162 | None:intergenic |
| ATATGTGAGGCAATGATGCT+AGG | 0.552240 | tig0009029:+7122 | Msa1346560:intergenic |
| AGGCAATGATGCTAGGAAAA+GGG | 0.552818 | tig0009029:+7129 | Msa1346560:intergenic |
| TTCAACAGAGGGAGTACATG+TGG | 0.560849 | tig0009029:-6617 | Msa1346560:CDS |
| AGCTATGGAAAACATAGTGT+TGG | 0.560850 | tig0009029:-6656 | Msa1346560:CDS |
| AGTAGAGAAGTGTGGACTGA+AGG | 0.569353 | tig0009029:+7010 | Msa1346560:intergenic |
| GGGTTGAAATTCACAATGAG+TGG | 0.572612 | tig0009029:-5948 | Msa1346560:CDS |
| GGTCTCTCAGTTGATTATGG+TGG | 0.580447 | tig0009029:-6494 | Msa1346560:CDS |
| ATACCAATGGCAAGGAATTG+GGG | 0.587228 | tig0009029:-5834 | Msa1346560:CDS |
| TCAACAGAGGGAGTACATGT+GGG | 0.614475 | tig0009029:-6616 | Msa1346560:CDS |
| TAAAATCAAGTAGAGAAGTG+TGG | 0.616273 | tig0009029:+7002 | Msa1346560:intergenic |
| TGAAGTGTGAAAGAAGTGGA+GGG | 0.622177 | tig0009029:-5968 | Msa1346560:CDS |
| ATCAAAGAATTGTGCAAGTG+TGG | 0.624008 | tig0009029:-5559 | Msa1346560:three_prime_UTR |
| TGAAGGGATCTAGAACAGGA+TGG | 0.625878 | tig0009029:-5857 | Msa1346560:CDS |
| ACTGAGAGACCAAAATTAGG+AGG | 0.626412 | tig0009029:+6506 | Msa1346560:intergenic |
| CAGGATGGATACCAATGGCA+AGG | 0.630186 | tig0009029:-5842 | Msa1346560:CDS |
| CTAGTTACCTCAAAGGACAA+AGG | 0.637645 | tig0009029:+5774 | Msa1346560:intergenic |
| GTCATTCATATATGTAAACA+GGG | 0.643903 | tig0009029:-5653 | Msa1346560:three_prime_UTR |
| GTGGCAGTAACAATAACAGA+AGG | 0.647537 | tig0009029:+6539 | Msa1346560:intergenic |
| TAGAACAGGATGGATACCAA+TGG | 0.662207 | tig0009029:-5847 | Msa1346560:CDS |
| CAACAGAGGGAGTACATGTG+GGG | 0.668401 | tig0009029:-6615 | Msa1346560:CDS |
| ACTTATGCCAAAGACACAGA+AGG | 0.668875 | tig0009029:-6922 | Msa1346560:CDS |
| AGTGCTGCTAGTTACCTCAA+AGG | 0.674064 | tig0009029:+5767 | Msa1346560:intergenic |
| CATTTGCTGAAATTGCTAAG+GGG | 0.677827 | tig0009029:-6427 | Msa1346560:CDS |
| AAGTTCTGATAACTAATGTG+GGG | 0.688292 | tig0009029:-5908 | Msa1346560:CDS |
| ATTAGGAGGACAGAAATCAG+TGG | 0.688419 | tig0009029:+6520 | Msa1346560:intergenic |
| TGTGATGCAGAAGGAGCTTG+TGG | 0.691735 | tig0009029:-6701 | Msa1346560:intron |
| AGAGTGAAGTGTGAAAGAAG+TGG | 0.695816 | tig0009029:-5972 | Msa1346560:CDS |
| GATGTGTTGACCATATCTTG+TGG | 0.783191 | tig0009029:-6577 | Msa1346560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGAAATAATTTACTTTT+AGG | + | tig0009029:5508-5527 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATAAGTGTTTTT+GGG | - | tig0009029:6225-6244 | Msa1346560:intron | 10.0% |
| !!! | AAATGAAATAATTTACTTTT+AGG | + | tig0009029:5508-5527 | Msa1346560:intergenic | 10.0% |
| !!! | ATTTTTTTATAAGTGTTTTT+GGG | - | tig0009029:6225-6244 | Msa1346560:intron | 10.0% |
| !!! | AATCATGTACATTTTTTTTT+TGG | + | tig0009029:5858-5877 | Msa1346560:intergenic | 15.0% |
| !!! | GATTTTTTTATAAGTGTTTT+TGG | - | tig0009029:6224-6243 | Msa1346560:intron | 15.0% |
| !! | AACTTAATTAATCTCTTATT+TGG | - | tig0009029:6264-6283 | Msa1346560:intron | 15.0% |
| !!! | AATCATGTACATTTTTTTTT+TGG | + | tig0009029:5858-5877 | Msa1346560:intergenic | 15.0% |
| !!! | GATTTTTTTATAAGTGTTTT+TGG | - | tig0009029:6224-6243 | Msa1346560:intron | 15.0% |
| !! | AACTTAATTAATCTCTTATT+TGG | - | tig0009029:6264-6283 | Msa1346560:intron | 15.0% |
| !! | GTTTATATAAAAACAGTTCA+AGG | + | tig0009029:6349-6368 | Msa1346560:intergenic | 20.0% |
| !!! | ACTGTTTTTATATAAACGTT+TGG | - | tig0009029:6352-6371 | Msa1346560:intron | 20.0% |
| !! | AAATGAAACTAAAAAACACA+AGG | + | tig0009029:6416-6435 | Msa1346560:intergenic | 20.0% |
| !!! | TGTGTTTTTTAGTTTCATTT+TGG | - | tig0009029:6416-6435 | Msa1346560:CDS | 20.0% |
| !! | ATAACATAGCTAATAAAAAG+AGG | + | tig0009029:6498-6517 | Msa1346560:intergenic | 20.0% |
| !!! | ATTTGAAGGAAAACAATTTT+AGG | - | tig0009029:6901-6920 | Msa1346560:intron | 20.0% |
| !! | CTTATACAAATTATGATTCA+TGG | - | tig0009029:6964-6983 | Msa1346560:CDS | 20.0% |
| !! | GTTTATATAAAAACAGTTCA+AGG | + | tig0009029:6349-6368 | Msa1346560:intergenic | 20.0% |
| !!! | ACTGTTTTTATATAAACGTT+TGG | - | tig0009029:6352-6371 | Msa1346560:intron | 20.0% |
| !! | AAATGAAACTAAAAAACACA+AGG | + | tig0009029:6416-6435 | Msa1346560:intergenic | 20.0% |
| !!! | TGTGTTTTTTAGTTTCATTT+TGG | - | tig0009029:6416-6435 | Msa1346560:CDS | 20.0% |
| !! | ATAACATAGCTAATAAAAAG+AGG | + | tig0009029:6498-6517 | Msa1346560:intergenic | 20.0% |
| !!! | ATTTGAAGGAAAACAATTTT+AGG | - | tig0009029:6901-6920 | Msa1346560:intron | 20.0% |
| !! | CTTATACAAATTATGATTCA+TGG | - | tig0009029:6964-6983 | Msa1346560:CDS | 20.0% |
| !! | TAAATGCTGTTATCTAAGAT+GGG | - | tig0009029:5553-5572 | Msa1346560:three_prime_UTR | 25.0% |
| !!! | AAGAAAAGTACCTGTAATTA+GGG | + | tig0009029:5695-5714 | Msa1346560:intergenic | 25.0% |
| !!! | CATGTACATTTTTTTTTTGG+TGG | + | tig0009029:5855-5874 | Msa1346560:intergenic | 25.0% |
| ! | TATCTACCTTCTATATTGAA+CGG | + | tig0009029:6204-6223 | Msa1346560:intergenic | 25.0% |
| ! | AAAAAGAGGCAAAAAAGATT+AGG | + | tig0009029:6484-6503 | Msa1346560:intergenic | 25.0% |
| ! | GCACAAACAAAACAAAAATT+TGG | + | tig0009029:6586-6605 | Msa1346560:intergenic | 25.0% |
| ! | TGTCATTCATATATGTAAAC+AGG | - | tig0009029:6935-6954 | Msa1346560:CDS | 25.0% |
| ! | GTCATTCATATATGTAAACA+GGG | - | tig0009029:6936-6955 | Msa1346560:CDS | 25.0% |
| ! | AATTATGATTCATGGAATCA+TGG | - | tig0009029:6972-6991 | Msa1346560:CDS | 25.0% |
| ! | GTTATATAAAATTGAGCCAA+TGG | - | tig0009029:7080-7099 | Msa1346560:five_prime_UTR | 25.0% |
| !! | TAAATGCTGTTATCTAAGAT+GGG | - | tig0009029:5553-5572 | Msa1346560:three_prime_UTR | 25.0% |
| !!! | AAGAAAAGTACCTGTAATTA+GGG | + | tig0009029:5695-5714 | Msa1346560:intergenic | 25.0% |
| !!! | CATGTACATTTTTTTTTTGG+TGG | + | tig0009029:5855-5874 | Msa1346560:intergenic | 25.0% |
| ! | TATCTACCTTCTATATTGAA+CGG | + | tig0009029:6204-6223 | Msa1346560:intergenic | 25.0% |
| ! | AAAAAGAGGCAAAAAAGATT+AGG | + | tig0009029:6484-6503 | Msa1346560:intergenic | 25.0% |
| ! | GCACAAACAAAACAAAAATT+TGG | + | tig0009029:6586-6605 | Msa1346560:intergenic | 25.0% |
| ! | TGTCATTCATATATGTAAAC+AGG | - | tig0009029:6935-6954 | Msa1346560:CDS | 25.0% |
| ! | GTCATTCATATATGTAAACA+GGG | - | tig0009029:6936-6955 | Msa1346560:CDS | 25.0% |
| ! | AATTATGATTCATGGAATCA+TGG | - | tig0009029:6972-6991 | Msa1346560:CDS | 25.0% |
| ! | GTTATATAAAATTGAGCCAA+TGG | - | tig0009029:7080-7099 | Msa1346560:five_prime_UTR | 25.0% |
| ! | TTGTGTTTTTCTCATATGTG+AGG | + | tig0009029:5483-5502 | None:intergenic | 30.0% |
| CTAAATGCTGTTATCTAAGA+TGG | - | tig0009029:5552-5571 | Msa1346560:three_prime_UTR | 30.0% | |
| TAAAATCAAGTAGAGAAGTG+TGG | + | tig0009029:5590-5609 | Msa1346560:intergenic | 30.0% | |
| TTGCTTACAAAGATCAAGAA+TGG | - | tig0009029:5629-5648 | Msa1346560:three_prime_UTR | 30.0% | |
| !! | CAAGAAAAGTACCTGTAATT+AGG | + | tig0009029:5696-5715 | Msa1346560:intergenic | 30.0% |
| !!! | ATTTTTTTTTTGGTGGTGGT+CGG | + | tig0009029:5848-5867 | Msa1346560:intergenic | 30.0% |
| !!! | GTACATTTTTTTTTTGGTGG+TGG | + | tig0009029:5852-5871 | Msa1346560:intergenic | 30.0% |
| TTATTCCCGTTCAATATAGA+AGG | - | tig0009029:6195-6214 | Msa1346560:intron | 30.0% | |
| ATCTACCTTCTATATTGAAC+GGG | + | tig0009029:6203-6222 | Msa1346560:intergenic | 30.0% | |
| !!! | AAGTGTTTTTGGGATGTTTT+TGG | - | tig0009029:6235-6254 | Msa1346560:intron | 30.0% |
| ! | TCAAGTTCTGATAACTAATG+TGG | - | tig0009029:6679-6698 | Msa1346560:CDS | 30.0% |
| ! | CAAGTTCTGATAACTAATGT+GGG | - | tig0009029:6680-6699 | Msa1346560:CDS | 30.0% |
| ! | AAGTTCTGATAACTAATGTG+GGG | - | tig0009029:6681-6700 | Msa1346560:CDS | 30.0% |
| CAATTTGGACAAACATTTGA+AGG | - | tig0009029:6887-6906 | Msa1346560:intron | 30.0% | |
| ! | AACAATTTTAGGCTTCAACA+TGG | - | tig0009029:6912-6931 | Msa1346560:CDS | 30.0% |
| ! | ATGAGCAAATATACCGTTTT+TGG | + | tig0009029:7002-7021 | Msa1346560:intergenic | 30.0% |
| ! | TTGTGTTTTTCTCATATGTG+AGG | + | tig0009029:5483-5502 | Msa1346560:intergenic | 30.0% |
| CTAAATGCTGTTATCTAAGA+TGG | - | tig0009029:5552-5571 | Msa1346560:three_prime_UTR | 30.0% | |
| TAAAATCAAGTAGAGAAGTG+TGG | + | tig0009029:5590-5609 | Msa1346560:intergenic | 30.0% | |
| TTGCTTACAAAGATCAAGAA+TGG | - | tig0009029:5629-5648 | Msa1346560:three_prime_UTR | 30.0% | |
| !! | CAAGAAAAGTACCTGTAATT+AGG | + | tig0009029:5696-5715 | Msa1346560:intergenic | 30.0% |
| !!! | ATTTTTTTTTTGGTGGTGGT+CGG | + | tig0009029:5848-5867 | Msa1346560:intergenic | 30.0% |
| !!! | GTACATTTTTTTTTTGGTGG+TGG | + | tig0009029:5852-5871 | Msa1346560:intergenic | 30.0% |
| TTATTCCCGTTCAATATAGA+AGG | - | tig0009029:6195-6214 | Msa1346560:intron | 30.0% | |
| ATCTACCTTCTATATTGAAC+GGG | + | tig0009029:6203-6222 | Msa1346560:intergenic | 30.0% | |
| !!! | AAGTGTTTTTGGGATGTTTT+TGG | - | tig0009029:6235-6254 | Msa1346560:intron | 30.0% |
| ! | TCAAGTTCTGATAACTAATG+TGG | - | tig0009029:6679-6698 | Msa1346560:CDS | 30.0% |
| ! | CAAGTTCTGATAACTAATGT+GGG | - | tig0009029:6680-6699 | Msa1346560:CDS | 30.0% |
| ! | AAGTTCTGATAACTAATGTG+GGG | - | tig0009029:6681-6700 | Msa1346560:CDS | 30.0% |
| CAATTTGGACAAACATTTGA+AGG | - | tig0009029:6887-6906 | Msa1346560:intron | 30.0% | |
| ! | AACAATTTTAGGCTTCAACA+TGG | - | tig0009029:6912-6931 | Msa1346560:CDS | 30.0% |
| ! | ATGAGCAAATATACCGTTTT+TGG | + | tig0009029:7002-7021 | Msa1346560:intergenic | 30.0% |
| ! | ATGTTGCTGTTATGAACCAA+AGG | + | tig0009029:5724-5743 | Msa1346560:intergenic | 35.0% |
| GCATAATATATGCAAGATCC+AGG | - | tig0009029:5813-5832 | Msa1346560:CDS | 35.0% | |
| !!! | TTTTTTTTTTGGTGGTGGTC+GGG | + | tig0009029:5847-5866 | Msa1346560:intergenic | 35.0% |
| AGCTATGGAAAACATAGTGT+TGG | - | tig0009029:5933-5952 | Msa1346560:CDS | 35.0% | |
| ! | AGCACAATTTTGTTCAACAG+AGG | - | tig0009029:5960-5979 | Msa1346560:CDS | 35.0% |
| ! | GCACAATTTTGTTCAACAGA+GGG | - | tig0009029:5961-5980 | Msa1346560:CDS | 35.0% |
| ! | GATTTCTGTCCTCCTAATTT+TGG | - | tig0009029:6074-6093 | Msa1346560:intron | 35.0% |
| TCAACTGAGAGACCAAAATT+AGG | + | tig0009029:6089-6108 | Msa1346560:intergenic | 35.0% | |
| TTTGGTCTCTCAGTTGATTA+TGG | - | tig0009029:6092-6111 | Msa1346560:intron | 35.0% | |
| GACAACTCAAAATGTTCTCT+TGG | + | tig0009029:6134-6153 | Msa1346560:intergenic | 35.0% | |
| !!! | AGAACATTTTGAGTTGTCAC+TGG | - | tig0009029:6136-6155 | Msa1346560:intron | 35.0% |
| ! | TGCATTTGCTGAAATTGCTA+AGG | - | tig0009029:6160-6179 | Msa1346560:intron | 35.0% |
| ! | GCATTTGCTGAAATTGCTAA+GGG | - | tig0009029:6161-6180 | Msa1346560:intron | 35.0% |
| ! | CATTTGCTGAAATTGCTAAG+GGG | - | tig0009029:6162-6181 | Msa1346560:intron | 35.0% |
| ! | GTTTGGCTCAATTACACATT+TGG | - | tig0009029:6369-6388 | Msa1346560:intron | 35.0% |
| ATAACTAATGTGGGGTTAGA+TGG | - | tig0009029:6689-6708 | Msa1346560:CDS | 35.0% | |
| !! | AGTTTTTGCTGTGAAAGTGA+AGG | - | tig0009029:6715-6734 | Msa1346560:intron | 35.0% |
| !! | GTTTTTGCTGTGAAAGTGAA+GGG | - | tig0009029:6716-6735 | Msa1346560:intron | 35.0% |
| GAATCATGGTAGACCAAAAA+CGG | - | tig0009029:6986-7005 | Msa1346560:CDS | 35.0% | |
| ATCAAAGAATTGTGCAAGTG+TGG | - | tig0009029:7030-7049 | Msa1346560:CDS | 35.0% | |
| !!! | ATGACTGCTTTTTTGGTCAA+TGG | + | tig0009029:7132-7151 | Msa1346560:intergenic | 35.0% |
| !!! | TTCGTCAATGACTGCTTTTT+TGG | + | tig0009029:7139-7158 | Msa1346560:intergenic | 35.0% |
| CGAAGTCTATTAACCTATGA+AGG | - | tig0009029:7155-7174 | Msa1346560:five_prime_UTR | 35.0% | |
| ! | ATGTTGCTGTTATGAACCAA+AGG | + | tig0009029:5724-5743 | Msa1346560:intergenic | 35.0% |
| GCATAATATATGCAAGATCC+AGG | - | tig0009029:5813-5832 | Msa1346560:CDS | 35.0% | |
| !!! | TTTTTTTTTTGGTGGTGGTC+GGG | + | tig0009029:5847-5866 | Msa1346560:intergenic | 35.0% |
| AGCTATGGAAAACATAGTGT+TGG | - | tig0009029:5933-5952 | Msa1346560:CDS | 35.0% | |
| ! | AGCACAATTTTGTTCAACAG+AGG | - | tig0009029:5960-5979 | Msa1346560:CDS | 35.0% |
| ! | GCACAATTTTGTTCAACAGA+GGG | - | tig0009029:5961-5980 | Msa1346560:CDS | 35.0% |
| ! | GATTTCTGTCCTCCTAATTT+TGG | - | tig0009029:6074-6093 | Msa1346560:intron | 35.0% |
| TCAACTGAGAGACCAAAATT+AGG | + | tig0009029:6089-6108 | Msa1346560:intergenic | 35.0% | |
| TTTGGTCTCTCAGTTGATTA+TGG | - | tig0009029:6092-6111 | Msa1346560:intron | 35.0% | |
| GACAACTCAAAATGTTCTCT+TGG | + | tig0009029:6134-6153 | Msa1346560:intergenic | 35.0% | |
| !!! | AGAACATTTTGAGTTGTCAC+TGG | - | tig0009029:6136-6155 | Msa1346560:intron | 35.0% |
| ! | TGCATTTGCTGAAATTGCTA+AGG | - | tig0009029:6160-6179 | Msa1346560:intron | 35.0% |
| ! | GCATTTGCTGAAATTGCTAA+GGG | - | tig0009029:6161-6180 | Msa1346560:intron | 35.0% |
| ! | CATTTGCTGAAATTGCTAAG+GGG | - | tig0009029:6162-6181 | Msa1346560:intron | 35.0% |
| ! | GTTTGGCTCAATTACACATT+TGG | - | tig0009029:6369-6388 | Msa1346560:intron | 35.0% |
| ATAACTAATGTGGGGTTAGA+TGG | - | tig0009029:6689-6708 | Msa1346560:CDS | 35.0% | |
| !! | AGTTTTTGCTGTGAAAGTGA+AGG | - | tig0009029:6715-6734 | Msa1346560:intron | 35.0% |
| !! | GTTTTTGCTGTGAAAGTGAA+GGG | - | tig0009029:6716-6735 | Msa1346560:intron | 35.0% |
| GAATCATGGTAGACCAAAAA+CGG | - | tig0009029:6986-7005 | Msa1346560:CDS | 35.0% | |
| ATCAAAGAATTGTGCAAGTG+TGG | - | tig0009029:7030-7049 | Msa1346560:CDS | 35.0% | |
| !!! | ATGACTGCTTTTTTGGTCAA+TGG | + | tig0009029:7132-7151 | Msa1346560:intergenic | 35.0% |
| !!! | TTCGTCAATGACTGCTTTTT+TGG | + | tig0009029:7139-7158 | Msa1346560:intergenic | 35.0% |
| AGGCAATGATGCTAGGAAAA+GGG | + | tig0009029:5463-5482 | None:intergenic | 40.0% | |
| ATATGTGAGGCAATGATGCT+AGG | + | tig0009029:5470-5489 | None:intergenic | 40.0% | |
| ACTTATGCCAAAGACACAGA+AGG | - | tig0009029:5667-5686 | Msa1346560:three_prime_UTR | 40.0% | |
| ACAGAAGGATCCCTAATTAC+AGG | - | tig0009029:5682-5701 | Msa1346560:exon | 40.0% | |
| ! | TACTTTTCTTGCTCCTCCTT+TGG | - | tig0009029:5705-5724 | Msa1346560:CDS | 40.0% |
| ! | TTGCTGTTATGAACCAAAGG+AGG | + | tig0009029:5721-5740 | Msa1346560:intergenic | 40.0% |
| !!! | TTTTTTTTTGGTGGTGGTCG+GGG | + | tig0009029:5846-5865 | Msa1346560:intergenic | 40.0% |
| GATCTTCACAAAGCTAGCTA+TGG | - | tig0009029:5918-5937 | Msa1346560:CDS | 40.0% | |
| ! | GATGTGTTGACCATATCTTG+TGG | - | tig0009029:6012-6031 | Msa1346560:intron | 40.0% |
| CAAGCATACACCACAAGATA+TGG | + | tig0009029:6025-6044 | Msa1346560:intergenic | 40.0% | |
| CATATCTTGTGGTGTATGCT+TGG | - | tig0009029:6023-6042 | Msa1346560:intron | 40.0% | |
| GTGGCAGTAACAATAACAGA+AGG | + | tig0009029:6053-6072 | Msa1346560:intergenic | 40.0% | |
| ATTAGGAGGACAGAAATCAG+TGG | + | tig0009029:6072-6091 | Msa1346560:intergenic | 40.0% | |
| ACTGAGAGACCAAAATTAGG+AGG | + | tig0009029:6086-6105 | Msa1346560:intergenic | 40.0% | |
| TCTCAGTTGATTATGGTGGT+TGG | - | tig0009029:6099-6118 | Msa1346560:intron | 40.0% | |
| AGAGTGAAGTGTGAAAGAAG+TGG | - | tig0009029:6617-6636 | Msa1346560:CDS | 40.0% | |
| TGAAGTGTGAAAGAAGTGGA+GGG | - | tig0009029:6621-6640 | Msa1346560:CDS | 40.0% | |
| GGGTTGAAATTCACAATGAG+TGG | - | tig0009029:6641-6660 | Msa1346560:CDS | 40.0% | |
| ! | AAAGTGAAGGGATCTAGAAC+AGG | - | tig0009029:6728-6747 | Msa1346560:intron | 40.0% |
| TAGAACAGGATGGATACCAA+TGG | - | tig0009029:6742-6761 | Msa1346560:intron | 40.0% | |
| GATACCAATGGCAAGGAATT+GGG | - | tig0009029:6754-6773 | Msa1346560:intron | 40.0% | |
| ATACCAATGGCAAGGAATTG+GGG | - | tig0009029:6755-6774 | Msa1346560:intron | 40.0% | |
| CAAGGAATTGGGGAATGAAT+TGG | - | tig0009029:6765-6784 | Msa1346560:intron | 40.0% | |
| CTAGTTACCTCAAAGGACAA+AGG | + | tig0009029:6818-6837 | Msa1346560:intergenic | 40.0% | |
| GTTTGTCCAAATTGCCAGTT+TGG | + | tig0009029:6881-6900 | Msa1346560:intergenic | 40.0% | |
| CTTTGTGTTGTGCATACCAT+TGG | + | tig0009029:7099-7118 | Msa1346560:intergenic | 40.0% | |
| AGGCAATGATGCTAGGAAAA+GGG | + | tig0009029:5463-5482 | Msa1346560:intergenic | 40.0% | |
| ATATGTGAGGCAATGATGCT+AGG | + | tig0009029:5470-5489 | Msa1346560:intergenic | 40.0% | |
| ACTTATGCCAAAGACACAGA+AGG | - | tig0009029:5667-5686 | Msa1346560:three_prime_UTR | 40.0% | |
| ACAGAAGGATCCCTAATTAC+AGG | - | tig0009029:5682-5701 | Msa1346560:exon | 40.0% | |
| ! | TACTTTTCTTGCTCCTCCTT+TGG | - | tig0009029:5705-5724 | Msa1346560:CDS | 40.0% |
| ! | TTGCTGTTATGAACCAAAGG+AGG | + | tig0009029:5721-5740 | Msa1346560:intergenic | 40.0% |
| !!! | TTTTTTTTTGGTGGTGGTCG+GGG | + | tig0009029:5846-5865 | Msa1346560:intergenic | 40.0% |
| GATCTTCACAAAGCTAGCTA+TGG | - | tig0009029:5918-5937 | Msa1346560:CDS | 40.0% | |
| ! | GATGTGTTGACCATATCTTG+TGG | - | tig0009029:6012-6031 | Msa1346560:intron | 40.0% |
| CAAGCATACACCACAAGATA+TGG | + | tig0009029:6025-6044 | Msa1346560:intergenic | 40.0% | |
| CATATCTTGTGGTGTATGCT+TGG | - | tig0009029:6023-6042 | Msa1346560:intron | 40.0% | |
| GTGGCAGTAACAATAACAGA+AGG | + | tig0009029:6053-6072 | Msa1346560:intergenic | 40.0% | |
| ATTAGGAGGACAGAAATCAG+TGG | + | tig0009029:6072-6091 | Msa1346560:intergenic | 40.0% | |
| ACTGAGAGACCAAAATTAGG+AGG | + | tig0009029:6086-6105 | Msa1346560:intergenic | 40.0% | |
| TCTCAGTTGATTATGGTGGT+TGG | - | tig0009029:6099-6118 | Msa1346560:intron | 40.0% | |
| AGAGTGAAGTGTGAAAGAAG+TGG | - | tig0009029:6617-6636 | Msa1346560:CDS | 40.0% | |
| TGAAGTGTGAAAGAAGTGGA+GGG | - | tig0009029:6621-6640 | Msa1346560:CDS | 40.0% | |
| GGGTTGAAATTCACAATGAG+TGG | - | tig0009029:6641-6660 | Msa1346560:CDS | 40.0% | |
| ! | AAAGTGAAGGGATCTAGAAC+AGG | - | tig0009029:6728-6747 | Msa1346560:intron | 40.0% |
| TAGAACAGGATGGATACCAA+TGG | - | tig0009029:6742-6761 | Msa1346560:intron | 40.0% | |
| GATACCAATGGCAAGGAATT+GGG | - | tig0009029:6754-6773 | Msa1346560:intron | 40.0% | |
| ATACCAATGGCAAGGAATTG+GGG | - | tig0009029:6755-6774 | Msa1346560:intron | 40.0% | |
| CAAGGAATTGGGGAATGAAT+TGG | - | tig0009029:6765-6784 | Msa1346560:intron | 40.0% | |
| CTAGTTACCTCAAAGGACAA+AGG | + | tig0009029:6818-6837 | Msa1346560:intergenic | 40.0% | |
| GTTTGTCCAAATTGCCAGTT+TGG | + | tig0009029:6881-6900 | Msa1346560:intergenic | 40.0% | |
| CTTTGTGTTGTGCATACCAT+TGG | + | tig0009029:7099-7118 | Msa1346560:intergenic | 40.0% | |
| GAGGCAATGATGCTAGGAAA+AGG | + | tig0009029:5464-5483 | None:intergenic | 45.0% | |
| ! | AGTAGAGAAGTGTGGACTGA+AGG | + | tig0009029:5582-5601 | Msa1346560:intergenic | 45.0% |
| GTCTTTGGCATAAGTTGCAG+TGG | + | tig0009029:5662-5681 | Msa1346560:intergenic | 45.0% | |
| TAGGGATCCTTCTGTGTCTT+TGG | + | tig0009029:5677-5696 | Msa1346560:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | tig0009029:5785-5804 | Msa1346560:CDS | 45.0% |
| TTGTGTGCATGTGATGCAGA+AGG | - | tig0009029:5879-5898 | Msa1346560:CDS | 45.0% | |
| ! | TTCAACAGAGGGAGTACATG+TGG | - | tig0009029:5972-5991 | Msa1346560:CDS | 45.0% |
| ! | TCAACAGAGGGAGTACATGT+GGG | - | tig0009029:5973-5992 | Msa1346560:CDS | 45.0% |
| GGTCTCTCAGTTGATTATGG+TGG | - | tig0009029:6095-6114 | Msa1346560:intron | 45.0% | |
| GTGAAGTGTGAAAGAAGTGG+AGG | - | tig0009029:6620-6639 | Msa1346560:CDS | 45.0% | |
| ! | TGAAGGGATCTAGAACAGGA+TGG | - | tig0009029:6732-6751 | Msa1346560:intron | 45.0% |
| GGATACCAATGGCAAGGAAT+TGG | - | tig0009029:6753-6772 | Msa1346560:intron | 45.0% | |
| ATTCCCCAATTCCTTGCCAT+TGG | + | tig0009029:6761-6780 | Msa1346560:intergenic | 45.0% | |
| AGGACAAAGGCTGATGTTGA+AGG | + | tig0009029:6805-6824 | Msa1346560:intergenic | 45.0% | |
| ACATCAGCCTTTGTCCTTTG+AGG | - | tig0009029:6808-6827 | Msa1346560:intron | 45.0% | |
| ! | AGTGCTGCTAGTTACCTCAA+AGG | + | tig0009029:6825-6844 | Msa1346560:intergenic | 45.0% |
| ! | TTTGAGGTAACTAGCAGCAC+TGG | - | tig0009029:6824-6843 | Msa1346560:intron | 45.0% |
| ACAATGTAGCACCTCCAAAC+TGG | - | tig0009029:6864-6883 | Msa1346560:intron | 45.0% | |
| TGTCCAAATTGCCAGTTTGG+AGG | + | tig0009029:6878-6897 | Msa1346560:intergenic | 45.0% | |
| GAGGCAATGATGCTAGGAAA+AGG | + | tig0009029:5464-5483 | Msa1346560:intergenic | 45.0% | |
| ! | AGTAGAGAAGTGTGGACTGA+AGG | + | tig0009029:5582-5601 | Msa1346560:intergenic | 45.0% |
| GTCTTTGGCATAAGTTGCAG+TGG | + | tig0009029:5662-5681 | Msa1346560:intergenic | 45.0% | |
| TAGGGATCCTTCTGTGTCTT+TGG | + | tig0009029:5677-5696 | Msa1346560:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | tig0009029:5785-5804 | Msa1346560:CDS | 45.0% |
| TTGTGTGCATGTGATGCAGA+AGG | - | tig0009029:5879-5898 | Msa1346560:CDS | 45.0% | |
| ! | TTCAACAGAGGGAGTACATG+TGG | - | tig0009029:5972-5991 | Msa1346560:CDS | 45.0% |
| ! | TCAACAGAGGGAGTACATGT+GGG | - | tig0009029:5973-5992 | Msa1346560:CDS | 45.0% |
| GGTCTCTCAGTTGATTATGG+TGG | - | tig0009029:6095-6114 | Msa1346560:intron | 45.0% | |
| GTGAAGTGTGAAAGAAGTGG+AGG | - | tig0009029:6620-6639 | Msa1346560:CDS | 45.0% | |
| ! | TGAAGGGATCTAGAACAGGA+TGG | - | tig0009029:6732-6751 | Msa1346560:intron | 45.0% |
| GGATACCAATGGCAAGGAAT+TGG | - | tig0009029:6753-6772 | Msa1346560:intron | 45.0% | |
| ATTCCCCAATTCCTTGCCAT+TGG | + | tig0009029:6761-6780 | Msa1346560:intergenic | 45.0% | |
| AGGACAAAGGCTGATGTTGA+AGG | + | tig0009029:6805-6824 | Msa1346560:intergenic | 45.0% | |
| ACATCAGCCTTTGTCCTTTG+AGG | - | tig0009029:6808-6827 | Msa1346560:intron | 45.0% | |
| ! | AGTGCTGCTAGTTACCTCAA+AGG | + | tig0009029:6825-6844 | Msa1346560:intergenic | 45.0% |
| ! | TTTGAGGTAACTAGCAGCAC+TGG | - | tig0009029:6824-6843 | Msa1346560:intron | 45.0% |
| ACAATGTAGCACCTCCAAAC+TGG | - | tig0009029:6864-6883 | Msa1346560:intron | 45.0% | |
| TGTCCAAATTGCCAGTTTGG+AGG | + | tig0009029:6878-6897 | Msa1346560:intergenic | 45.0% | |
| TGTGATGCAGAAGGAGCTTG+TGG | - | tig0009029:5888-5907 | Msa1346560:CDS | 50.0% | |
| GCAGAAGGAGCTTGTGGTTA+TGG | - | tig0009029:5894-5913 | Msa1346560:CDS | 50.0% | |
| ! | CAACAGAGGGAGTACATGTG+GGG | - | tig0009029:5974-5993 | Msa1346560:intron | 50.0% |
| CAGGATGGATACCAATGGCA+AGG | - | tig0009029:6747-6766 | Msa1346560:intron | 50.0% | |
| GCACCTCCAAACTGGCAATT+TGG | - | tig0009029:6872-6891 | Msa1346560:intron | 50.0% | |
| TGTGATGCAGAAGGAGCTTG+TGG | - | tig0009029:5888-5907 | Msa1346560:CDS | 50.0% | |
| GCAGAAGGAGCTTGTGGTTA+TGG | - | tig0009029:5894-5913 | Msa1346560:CDS | 50.0% | |
| ! | CAACAGAGGGAGTACATGTG+GGG | - | tig0009029:5974-5993 | Msa1346560:intron | 50.0% |
| CAGGATGGATACCAATGGCA+AGG | - | tig0009029:6747-6766 | Msa1346560:intron | 50.0% | |
| GCACCTCCAAACTGGCAATT+TGG | - | tig0009029:6872-6891 | Msa1346560:intron | 50.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | tig0009029:5783-5802 | Msa1346560:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | tig0009029:5780-5799 | Msa1346560:CDS | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | tig0009029:5783-5802 | Msa1346560:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | tig0009029:5780-5799 | Msa1346560:CDS | 55.0% | |
| GGTGGTCGGGGTTTGAATCC+TGG | + | tig0009029:5834-5853 | Msa1346560:intergenic | 60.0% | |
| GGTGGTCGGGGTTTGAATCC+TGG | + | tig0009029:5834-5853 | Msa1346560:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0009029 | gene | 5435 | 7176 | 5435 | ID=Msa1346560;Name=Msa1346560 |
| tig0009029 | mRNA | 5435 | 7176 | 5435 | ID=Msa1346560-mRNA-1;Parent=Msa1346560;Name=Msa1346560-mRNA-1;_AED=0.05;_eAED=0.05;_QI=121|1|1|1|1|1|3|254|256 |
| tig0009029 | exon | 5435 | 5992 | 5435 | ID=Msa1346560-mRNA-1:exon:5546;Parent=Msa1346560-mRNA-1 |
| tig0009029 | exon | 6395 | 6713 | 6395 | ID=Msa1346560-mRNA-1:exon:5545;Parent=Msa1346560-mRNA-1 |
| tig0009029 | exon | 6908 | 7176 | 6908 | ID=Msa1346560-mRNA-1:exon:5544;Parent=Msa1346560-mRNA-1 |
| tig0009029 | five_prime_UTR | 7056 | 7176 | 7056 | ID=Msa1346560-mRNA-1:five_prime_utr;Parent=Msa1346560-mRNA-1 |
| tig0009029 | CDS | 6908 | 7055 | 6908 | ID=Msa1346560-mRNA-1:cds;Parent=Msa1346560-mRNA-1 |
| tig0009029 | CDS | 6395 | 6713 | 6395 | ID=Msa1346560-mRNA-1:cds;Parent=Msa1346560-mRNA-1 |
| tig0009029 | CDS | 5689 | 5992 | 5689 | ID=Msa1346560-mRNA-1:cds;Parent=Msa1346560-mRNA-1 |
| tig0009029 | three_prime_UTR | 5435 | 5688 | 5435 | ID=Msa1346560-mRNA-1:three_prime_utr;Parent=Msa1346560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
