AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0144970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0144970 MtrunA17_Chr1g0153181 98.454 647 10 0 1 647 1 647 0.0 1313
Msa0144970 MtrunA17_Chr4g0044541 75.000 644 153 5 1 638 1 642 0.0 944
Msa0144970 MtrunA17_Chr3g0134141 73.718 624 142 6 25 647 17 619 0.0 907
Msa0144970 MtrunA17_Chr3g0134141 35.811 296 172 4 112 406 16 294 5.74e-48 178
Msa0144970 MtrunA17_Chr1g0201151 56.744 645 253 14 14 645 14 645 0.0 691
Msa0144970 MtrunA17_Chr6g0466501 51.177 637 250 14 14 629 12 608 0.0 577
Msa0144970 MtrunA17_Chr6g0465751 51.033 629 258 13 21 629 14 612 0.0 577
Msa0144970 MtrunA17_Chr6g0466451 53.008 532 219 13 106 628 1 510 2.89e-172 501
Msa0144970 MtrunA17_Chr6g0466451 36.934 287 162 5 33 302 16 300 4.34e-49 179
Msa0144970 MtrunA17_Chr6g0466451 32.857 210 118 5 32 222 105 310 7.67e-23 102
Msa0144970 MtrunA17_Chr6g0465631 52.820 532 220 13 106 628 1 510 2.13e-171 498
Msa0144970 MtrunA17_Chr6g0465631 36.934 287 162 5 33 302 16 300 4.70e-49 179
Msa0144970 MtrunA17_Chr6g0465631 32.857 210 118 5 32 222 105 310 8.03e-23 102
Msa0144970 MtrunA17_Chr6g0465691 50.446 561 222 13 90 629 1 526 4.63e-169 493
Msa0144970 MtrunA17_Chr6g0465691 36.299 281 165 3 33 300 32 311 3.55e-49 180
Msa0144970 MtrunA17_Chr6g0465691 31.551 187 110 2 32 201 118 303 1.64e-22 101
Msa0144970 MtrunA17_Chr0c09g0493511 49.126 572 239 14 90 641 1 540 2.91e-163 479
Msa0144970 MtrunA17_Chr0c09g0493511 37.367 281 162 3 33 300 32 311 1.41e-51 186
Msa0144970 MtrunA17_Chr0c09g0493511 32.620 187 108 2 32 201 118 303 1.63e-24 108
Msa0144970 MtrunA17_Chr7g0265341 44.127 630 302 11 23 626 61 666 3.18e-160 476
Msa0144970 MtrunA17_Chr1g0179701 42.630 441 225 4 33 469 63 479 2.47e-113 351
Msa0144970 MtrunA17_Chr1g0179701 36.585 287 162 4 120 404 62 330 4.24e-46 172
Msa0144970 MtrunA17_Chr1g0179701 29.570 186 118 2 32 205 241 425 4.14e-21 97.8
Msa0144970 MtrunA17_Chr1g0153871 30.418 263 173 6 122 380 99 355 9.99e-30 122
Msa0144970 MtrunA17_Chr1g0153871 27.376 263 167 7 33 276 98 355 1.66e-23 103
Msa0144970 MtrunA17_Chr1g0153871 32.000 175 97 4 33 190 191 360 4.54e-18 87.4
Msa0144970 MtrunA17_Chr3g0110211 37.791 172 104 3 32 201 25 195 1.25e-29 121
Msa0144970 MtrunA17_Chr3g0110211 30.500 200 126 6 113 309 18 207 6.57e-19 89.4
Msa0144970 MtrunA17_Chr3g0110211 31.746 189 108 5 214 399 28 198 4.64e-18 86.7
Msa0144970 MtrunA17_Chr3g0133651 27.152 302 205 8 107 399 76 371 1.68e-26 112
Msa0144970 MtrunA17_Chr3g0133651 26.894 264 168 7 33 276 94 352 5.01e-21 96.3
Msa0144970 MtrunA17_Chr2g0288251 28.517 263 161 9 33 273 61 318 8.75e-25 107
Msa0144970 MtrunA17_Chr2g0288251 25.188 266 186 9 122 380 62 321 4.77e-20 92.8
Msa0144970 MtrunA17_Chr2g0328791 24.534 322 197 8 33 314 16 331 6.52e-23 102
Msa0144970 MtrunA17_Chr2g0328791 24.870 193 128 5 206 394 10 189 2.76e-12 69.3
Msa0144970 MtrunA17_Chr3g0139111 27.143 280 163 7 33 279 61 332 9.53e-23 101
Msa0144970 MtrunA17_Chr3g0139111 25.084 299 197 7 112 392 52 341 2.02e-18 88.6
Msa0144970 MtrunA17_Chr4g0074711 27.305 282 169 10 14 273 64 331 1.26e-22 100
Msa0144970 MtrunA17_Chr4g0074711 25.455 275 193 8 112 380 66 334 1.71e-20 94.4
Msa0144970 MtrunA17_Chr4g0070231 26.667 300 190 8 112 392 38 326 2.79e-22 99.8
Msa0144970 MtrunA17_Chr4g0070231 25.818 275 162 7 33 274 47 312 8.64e-20 92.0
Msa0144970 MtrunA17_Chr6g0465621 64.516 62 22 0 29 90 22 83 1.05e-21 89.7
Msa0144970 MtrunA17_Chr6g0466441 64.516 62 22 0 29 90 22 83 1.05e-21 89.7
Msa0144970 MtrunA17_Chr0c09g0493521 51.765 85 34 1 1 85 1 78 4.06e-20 85.1
Msa0144970 MtrunA17_Chr6g0466541 36.250 160 66 3 245 404 2 125 6.08e-20 86.3
Msa0144970 MtrunA17_Chr6g0466541 36.111 144 69 2 154 297 2 122 8.06e-18 80.1
Msa0144970 MtrunA17_Chr6g0465741 64.179 67 23 1 571 636 40 106 6.15e-20 85.9
Msa0144970 MtrunA17_Chr0c09g0493581 55.556 72 27 1 14 85 12 78 2.89e-19 82.4
Msa0144970 MtrunA17_Chr6g0465701 51.899 79 33 1 14 92 12 85 3.72e-19 82.8
Msa0144970 MtrunA17_Chr4g0045221 26.282 312 180 10 122 399 118 413 3.94e-19 90.9
Msa0144970 MtrunA17_Chr4g0045221 25.795 283 166 8 33 276 117 394 3.36e-18 87.8
Msa0144970 MtrunA17_Chr4g0045221 30.256 195 122 6 205 394 110 295 2.03e-14 76.3
Msa0144970 MtrunA17_Chr8g0344491 26.374 273 163 7 33 274 63 328 8.53e-19 89.4
Msa0144970 MtrunA17_Chr8g0344491 26.335 281 173 9 111 372 57 322 7.55e-17 83.6
Msa0144970 MtrunA17_Chr8g0344491 25.824 182 115 4 212 392 63 225 3.91e-12 68.9
Msa0144970 MtrunA17_Chr7g0276201 27.407 405 229 18 109 500 93 445 1.69e-16 82.8
Msa0144970 MtrunA17_Chr7g0276201 22.677 269 189 5 32 292 104 361 8.80e-15 77.4
Msa0144970 MtrunA17_Chr8g0372111 24.219 256 172 8 34 278 420 664 2.37e-15 80.1
Msa0144970 MtrunA17_Chr8g0335981 24.016 254 170 7 34 276 217 458 3.07e-15 79.7
Msa0144970 MtrunA17_Chr8g0335981 22.112 303 186 10 115 406 210 473 8.53e-11 65.5
Msa0144970 MtrunA17_Chr3g0087481 30.500 200 128 6 184 380 34 225 5.84e-15 75.1
Msa0144970 MtrunA17_Chr3g0087481 25.146 171 116 3 34 192 62 232 1.69e-11 64.7
Msa0144970 MtrunA17_Chr4g0026301 24.590 244 168 6 32 269 110 343 6.50e-15 77.8
Msa0144970 MtrunA17_Chr1g0177101 30.653 199 126 5 196 390 93 283 1.02e-14 75.5
Msa0144970 MtrunA17_Chr1g0177101 27.778 162 105 2 34 183 110 271 8.03e-14 72.8
Msa0144970 MtrunA17_Chr6g0466551 61.538 65 24 1 566 629 34 98 1.54e-14 70.9
Msa0144970 MtrunA17_Chr7g0260761 23.951 405 262 9 14 382 264 658 2.29e-14 76.6
Msa0144970 MtrunA17_Chr7g0267571 30.964 197 129 5 198 390 95 288 6.63e-14 73.2
Msa0144970 MtrunA17_Chr7g0267571 28.415 183 102 4 28 185 100 278 2.20e-13 71.6
Msa0144970 MtrunA17_Chr1g0181111 29.016 193 108 4 25 192 81 269 7.47e-14 72.4
Msa0144970 MtrunA17_Chr3g0116631 29.630 189 117 4 213 396 111 288 1.20e-13 72.0
Msa0144970 MtrunA17_Chr3g0116631 27.059 170 112 3 34 192 111 279 2.73e-12 68.2
Msa0144970 MtrunA17_Chr3g0116631 26.111 180 126 4 120 292 109 288 7.21e-11 63.5
Msa0144970 MtrunA17_Chr7g0217261 23.828 256 179 7 19 269 338 582 4.99e-13 72.4
Msa0144970 MtrunA17_Chr4g0058151 27.545 167 112 3 34 192 124 289 6.90e-13 70.1
Msa0144970 MtrunA17_Chr4g0058151 28.342 187 119 4 213 396 124 298 1.31e-11 66.2
Msa0144970 MtrunA17_Chr4g0068631 25.773 194 124 5 210 398 87 265 8.86e-13 71.6
Msa0144970 MtrunA17_Chr4g0068631 26.797 153 109 1 34 183 90 242 3.43e-11 66.6
Msa0144970 MtrunA17_Chr7g0268551 27.174 276 162 8 207 463 7 262 9.83e-13 70.9
Msa0144970 MtrunA17_Chr7g0266451 25.306 245 162 8 32 269 101 331 1.39e-12 70.5
Msa0144970 MtrunA17_Chr3g0101061 30.000 180 109 6 213 383 42 213 2.61e-12 69.7
Msa0144970 MtrunA17_Chr3g0101061 27.011 174 109 5 122 279 42 213 5.34e-11 65.5
Msa0144970 MtrunA17_Chr1g0211191 26.708 161 100 2 33 176 71 230 6.86e-12 68.2
Msa0144970 MtrunA17_Chr3g0121631 41.772 79 45 1 31 109 35 112 1.11e-11 63.2
Msa0144970 MtrunA17_Chr7g0266751 38.272 81 49 1 115 194 27 107 2.28e-11 62.0
Msa0144970 MtrunA17_Chr7g0259641 28.182 220 142 7 121 329 586 800 4.13e-11 66.2
Msa0144970 MtrunA17_Chr7g0259641 25.946 185 113 5 26 192 579 757 5.72e-11 65.9
Msa0144970 MtrunA17_Chr4g0031091 35.802 81 51 1 115 194 28 108 4.66e-11 60.5
Msa0144970 MtrunA17_Chr5g0447761 27.174 184 108 6 116 279 2 179 5.83e-11 65.5
Msa0144970 MtrunA17_Chr5g0411091 28.108 185 120 4 212 393 97 271 6.59e-11 64.3
Msa0144970 MtrunA17_Chr2g0290191 23.864 176 115 4 34 190 6 181 7.10e-11 65.1
Msa0144970 MtrunA17_Chr1g0190351 25.079 315 183 10 116 390 310 611 8.63e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0144970 AT4G34110.1 67.945 652 179 6 1 645 1 629 0.0 855
Msa0144970 AT1G49760.1 67.512 631 185 7 31 647 44 668 0.0 818
Msa0144970 AT1G49760.2 67.512 631 185 7 31 647 44 668 0.0 818
Msa0144970 AT2G23350.1 64.762 630 192 10 32 646 46 660 0.0 793
Msa0144970 AT1G22760.1 54.160 637 264 13 2 625 23 644 0.0 612
Msa0144970 AT1G71770.1 53.175 630 270 12 31 643 58 679 0.0 598
Msa0144970 AT1G71770.2 53.175 630 270 12 31 643 58 679 0.0 598
Msa0144970 AT2G36660.1 39.448 616 300 13 30 626 22 583 1.62e-130 397
Msa0144970 AT1G34140.1 46.310 393 180 7 90 473 1 371 5.37e-111 340
Msa0144970 AT1G34140.1 35.336 283 166 4 33 300 32 312 1.16e-45 167
Msa0144970 AT1G34140.1 29.703 202 119 4 30 212 117 314 3.25e-22 100
Msa0144970 AT3G16380.1 42.995 414 222 7 33 437 22 430 1.22e-100 318
Msa0144970 AT3G16380.1 33.333 186 108 2 31 201 201 385 5.90e-23 103
Msa0144970 AT2G18510.1 36.047 172 107 3 32 201 25 195 1.14e-27 115
Msa0144970 AT2G18510.1 30.000 190 112 5 213 399 27 198 3.65e-16 81.3
Msa0144970 AT2G18510.1 26.230 183 127 5 113 292 18 195 9.20e-15 77.0
Msa0144970 AT1G47490.1 29.021 286 190 8 122 399 103 383 5.32e-26 111
Msa0144970 AT1G47490.1 26.493 268 168 8 33 276 102 364 2.26e-19 91.7
Msa0144970 AT1G47490.1 29.944 177 100 4 33 190 198 369 1.80e-15 79.7
Msa0144970 AT1G47500.1 28.866 291 184 10 122 399 105 385 1.33e-23 104
Msa0144970 AT1G47500.1 27.239 268 166 9 33 276 104 366 6.42e-19 90.5
Msa0144970 AT1G47500.1 30.508 177 99 4 33 190 200 371 1.12e-15 80.5
Msa0144970 AT1G11650.2 28.788 264 163 10 33 276 63 321 3.46e-23 102
Msa0144970 AT1G11650.2 24.221 289 208 7 121 404 63 345 1.73e-19 91.7
Msa0144970 AT5G54900.1 26.792 265 168 9 33 276 61 320 5.74e-23 102
Msa0144970 AT5G54900.1 24.815 270 191 9 117 380 57 320 2.32e-19 91.3
Msa0144970 AT5G54900.1 28.409 176 103 4 33 190 155 325 1.89e-13 73.2
Msa0144970 AT4G27000.1 26.236 263 170 8 33 276 81 338 1.26e-22 101
Msa0144970 AT4G27000.1 22.968 283 208 7 121 399 81 357 4.13e-18 87.8
Msa0144970 AT4G27000.1 27.411 197 124 6 203 394 72 254 1.34e-12 70.5
Msa0144970 AT5G41690.1 22.173 451 252 11 33 391 69 512 3.05e-21 98.6
Msa0144970 AT5G41690.3 22.173 451 252 11 33 391 69 512 3.05e-21 98.6
Msa0144970 AT5G41690.2 22.173 451 252 11 33 391 69 512 3.05e-21 98.6
Msa0144970 AT1G11650.1 28.862 246 150 10 33 258 63 303 3.67e-21 95.1
Msa0144970 AT1G11650.1 25.403 248 174 7 121 363 63 304 1.37e-17 84.3
Msa0144970 AT5G19350.2 24.453 274 172 7 33 276 25 293 1.97e-20 94.7
Msa0144970 AT5G19350.2 24.088 274 189 5 121 380 25 293 2.40e-18 88.6
Msa0144970 AT5G19350.2 26.984 189 104 4 33 192 117 300 1.53e-13 73.6
Msa0144970 AT1G45100.1 23.256 387 256 10 30 381 62 442 2.16e-20 95.5
Msa0144970 AT1G45100.1 25.597 293 171 6 25 274 151 439 1.52e-16 83.6
Msa0144970 AT5G19350.1 24.101 278 172 7 33 276 25 297 2.38e-20 94.7
Msa0144970 AT5G19350.1 24.101 278 188 6 121 380 25 297 6.68e-19 90.1
Msa0144970 AT5G19350.1 26.425 193 104 4 33 192 117 304 4.29e-13 72.0
Msa0144970 AT5G19350.1 24.017 229 142 7 209 425 22 230 8.87e-12 68.2
Msa0144970 AT1G49600.1 27.206 272 180 9 122 380 121 387 8.07e-20 93.2
Msa0144970 AT1G49600.1 26.374 273 167 7 33 276 120 387 1.25e-18 89.4
Msa0144970 AT1G49600.1 30.189 212 113 6 33 216 214 418 1.04e-14 77.4
Msa0144970 AT1G49600.3 27.206 272 180 9 122 380 121 387 9.66e-20 92.8
Msa0144970 AT1G49600.3 26.374 273 167 7 33 276 120 387 9.08e-19 90.1
Msa0144970 AT1G49600.2 27.206 272 180 9 122 380 121 387 9.66e-20 92.8
Msa0144970 AT1G49600.2 26.374 273 167 7 33 276 120 387 9.08e-19 90.1
Msa0144970 AT1G54080.1 28.369 282 166 9 111 372 58 323 1.46e-19 92.0
Msa0144970 AT1G54080.1 28.495 186 113 3 208 392 60 226 1.66e-15 79.7
Msa0144970 AT3G14100.1 25.830 271 163 6 33 272 60 323 3.20e-19 91.3
Msa0144970 AT3G14100.1 27.660 282 168 10 111 372 54 319 6.71e-18 87.0
Msa0144970 AT3G14100.1 29.121 182 109 3 212 392 60 222 1.95e-15 79.3
Msa0144970 AT3G19130.1 25.714 280 165 8 33 276 109 381 5.07e-19 90.5
Msa0144970 AT3G19130.1 27.240 279 176 9 122 380 110 381 9.71e-19 89.7
Msa0144970 AT1G17370.2 26.619 278 173 7 111 372 49 311 9.95e-19 89.7
Msa0144970 AT1G17370.2 25.556 270 162 7 33 272 55 315 2.19e-17 85.5
Msa0144970 AT1G17370.2 27.473 182 112 3 212 392 55 217 8.16e-13 71.2
Msa0144970 AT1G17370.1 27.758 281 169 10 111 372 49 314 1.30e-18 89.4
Msa0144970 AT1G17370.1 25.275 273 162 7 33 272 55 318 5.56e-17 84.3
Msa0144970 AT1G17370.1 27.473 182 112 3 212 392 55 217 8.88e-13 71.2
Msa0144970 AT1G54080.2 27.622 286 167 9 111 372 58 327 3.22e-18 88.2
Msa0144970 AT1G54080.2 28.947 190 111 4 208 392 60 230 2.41e-15 79.3
Msa0144970 AT2G15500.1 33.333 171 47 4 267 437 29 132 4.17e-17 78.6
Msa0144970 AT3G19350.1 51.389 72 35 0 560 631 23 94 9.90e-17 76.6
Msa0144970 AT4G00830.2 27.018 285 174 10 120 397 116 373 1.84e-16 83.2
Msa0144970 AT4G00830.2 24.542 273 184 7 32 295 116 375 7.96e-12 68.6
Msa0144970 AT4G00830.1 27.018 285 174 10 120 397 116 373 1.84e-16 83.2
Msa0144970 AT4G00830.1 24.542 273 184 7 32 295 116 375 7.96e-12 68.6
Msa0144970 AT4G00830.6 27.018 285 174 10 120 397 116 373 1.84e-16 83.2
Msa0144970 AT4G00830.6 24.542 273 184 7 32 295 116 375 7.96e-12 68.6
Msa0144970 AT3G52150.2 31.765 170 110 4 213 380 78 243 7.60e-16 78.2
Msa0144970 AT3G52150.2 28.421 190 117 5 111 286 69 253 9.68e-14 72.0
Msa0144970 AT3G52150.2 26.590 173 113 3 34 192 78 250 3.66e-13 70.5
Msa0144970 AT3G52150.1 31.765 170 110 4 213 380 78 243 7.60e-16 78.2
Msa0144970 AT3G52150.1 28.421 190 117 5 111 286 69 253 9.68e-14 72.0
Msa0144970 AT3G52150.1 26.590 173 113 3 34 192 78 250 3.66e-13 70.5
Msa0144970 AT2G37220.1 28.191 188 107 3 34 194 93 279 1.38e-15 78.2
Msa0144970 AT2G37220.1 25.373 201 127 3 117 294 88 288 7.82e-13 70.1
Msa0144970 AT4G00830.3 27.113 284 167 10 120 397 116 365 2.77e-15 79.3
Msa0144970 AT4G00830.3 24.164 269 182 7 32 295 116 367 4.49e-11 66.2
Msa0144970 AT4G00830.5 27.113 284 167 10 120 397 116 365 2.77e-15 79.3
Msa0144970 AT4G00830.5 24.164 269 182 7 32 295 116 367 4.49e-11 66.2
Msa0144970 AT2G35410.1 28.191 188 116 3 213 392 97 273 5.03e-15 77.0
Msa0144970 AT2G44710.4 22.300 287 200 7 5 280 102 376 9.46e-15 78.2
Msa0144970 AT2G44710.2 22.300 287 200 7 5 280 187 461 1.47e-14 77.8
Msa0144970 AT2G44710.1 22.300 287 200 7 5 280 187 461 1.47e-14 77.8
Msa0144970 AT4G00830.4 24.938 401 235 16 120 493 116 477 2.83e-14 76.3
Msa0144970 AT4G16280.3 28.662 157 105 3 31 182 119 273 4.89e-14 75.5
Msa0144970 AT4G16280.3 24.545 220 138 6 182 396 99 295 2.55e-13 73.6
Msa0144970 AT3G52380.1 24.855 173 114 3 34 190 118 290 7.08e-14 73.6
Msa0144970 AT3G52380.1 29.570 186 115 5 122 294 118 300 1.00e-13 73.2
Msa0144970 AT3G52380.1 28.261 184 128 3 213 394 118 299 6.03e-12 67.8
Msa0144970 AT4G16280.4 28.662 157 105 3 31 182 44 198 8.55e-14 75.1
Msa0144970 AT4G16280.4 24.545 220 138 6 182 396 24 220 4.79e-13 72.8
Msa0144970 AT4G16280.2 28.662 157 105 3 31 182 119 273 8.55e-14 75.5
Msa0144970 AT4G16280.2 24.545 220 138 6 182 396 99 295 4.77e-13 72.8
Msa0144970 AT1G01080.1 26.702 191 125 5 115 291 103 292 1.31e-13 72.4
Msa0144970 AT1G01080.2 26.562 192 125 5 115 291 103 293 1.53e-13 72.4
Msa0144970 AT3G13224.2 28.488 172 119 3 120 289 19 188 4.21e-13 71.6
Msa0144970 AT3G13224.2 25.444 169 103 4 213 376 21 171 1.15e-11 67.4
Msa0144970 AT3G13224.3 28.824 170 117 3 122 289 12 179 4.42e-13 71.6
Msa0144970 AT3G13224.3 25.444 169 103 4 213 376 12 162 9.70e-12 67.4
Msa0144970 AT1G47490.2 27.485 171 114 5 33 193 102 272 1.05e-12 70.1
Msa0144970 AT1G47490.2 27.957 186 127 6 122 300 103 288 1.09e-12 69.7
Msa0144970 AT1G60000.1 24.719 178 129 2 20 192 73 250 1.42e-12 68.6
Msa0144970 AT2G16940.5 27.381 168 104 3 33 184 42 207 2.35e-12 69.7
Msa0144970 AT2G16940.4 27.381 168 104 3 33 184 42 207 2.35e-12 69.7
Msa0144970 AT1G47500.2 26.901 171 115 5 33 193 104 274 3.77e-12 68.2
Msa0144970 AT5G55550.5 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0144970 AT5G55550.4 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0144970 AT5G55550.9 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0144970 AT5G55550.7 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0144970 AT5G55550.1 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0144970 AT2G16940.1 27.381 168 104 3 33 184 183 348 4.62e-12 69.3
Msa0144970 AT5G55550.2 30.168 179 114 5 213 383 8 183 5.65e-12 68.9
Msa0144970 AT5G55550.3 30.168 179 114 5 213 383 8 183 5.65e-12 68.9
Msa0144970 AT5G55550.6 30.168 179 114 5 213 383 8 183 5.65e-12 68.9
Msa0144970 AT5G55550.11 30.168 179 114 5 213 383 8 183 5.65e-12 68.9
Msa0144970 AT5G47620.1 27.222 180 114 5 213 383 8 179 6.97e-12 68.6
Msa0144970 AT5G47620.2 27.222 180 114 5 213 383 8 179 6.97e-12 68.6
Msa0144970 AT5G47620.5 27.222 180 114 5 213 383 8 179 6.97e-12 68.6
Msa0144970 AT2G16940.2 27.381 168 104 3 33 184 232 397 8.29e-12 68.9
Msa0144970 AT5G50250.1 28.342 187 119 5 213 396 115 289 9.49e-12 66.6
Msa0144970 AT5G50250.1 26.946 167 113 3 34 192 115 280 1.42e-11 66.2
Msa0144970 AT1G01080.3 27.168 173 111 5 115 273 103 274 1.02e-11 66.6
Msa0144970 AT4G19610.1 23.971 413 245 13 31 393 293 686 1.35e-11 68.2
Msa0144970 AT1G17640.2 26.601 203 138 6 109 302 55 255 1.37e-11 67.0
Msa0144970 AT1G17640.1 26.601 203 138 6 109 302 55 255 1.37e-11 67.0
Msa0144970 AT1G17640.3 26.601 203 138 6 109 302 55 255 1.37e-11 67.0
Msa0144970 AT4G26650.1 28.205 195 114 8 206 383 10 195 1.52e-11 67.4
Msa0144970 AT4G26650.2 28.205 195 114 8 206 383 7 192 1.60e-11 67.4
Msa0144970 AT2G47310.1 25.871 201 129 5 213 405 112 300 1.69e-11 67.4
Msa0144970 AT3G13224.1 25.444 169 103 4 213 376 21 171 2.02e-11 64.7
Msa0144970 AT3G13224.1 30.769 143 95 3 122 262 21 161 3.57e-11 63.9
Msa0144970 AT5G47620.4 28.351 194 116 7 213 383 8 201 2.26e-11 67.0
Msa0144970 AT4G24770.1 26.946 167 113 3 34 192 152 317 2.71e-11 65.9
Msa0144970 AT4G24770.2 26.946 167 113 3 34 192 152 317 2.71e-11 65.9
Msa0144970 AT5G03580.1 37.805 82 51 0 316 397 18 99 2.92e-11 60.8
Msa0144970 AT3G52660.3 20.635 252 186 4 32 277 92 335 4.66e-11 65.9
Msa0144970 AT3G52660.1 20.635 252 186 4 32 277 92 335 4.66e-11 65.9
Msa0144970 AT3G52660.2 20.635 252 186 4 32 277 92 335 4.66e-11 65.9
Msa0144970 AT4G14300.1 28.333 180 116 7 213 383 8 183 5.61e-11 65.5
Msa0144970 AT4G14300.2 28.333 180 116 7 213 383 8 183 5.61e-11 65.5
Msa0144970 AT5G40490.1 27.108 166 102 5 213 376 44 192 6.03e-11 65.5

Find 185 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACCAACAATTGGATTTA+TGG 0.118422 1_4:-4555645 Msa0144970:three_prime_UTR
CTTACAGTCCTCTGCTGTTC+AGG 0.204464 1_4:+4556196 None:intergenic
CTCTGAACAACAAATCTATT+AGG 0.219365 1_4:-4560084 Msa0144970:CDS
AATGCAATTGATAAGTTAAA+TGG 0.241081 1_4:-4558985 Msa0144970:CDS
AGTTTCAATGGCGCAGATTC+AGG 0.270119 1_4:-4560499 Msa0144970:exon
TAATAAATGCAGGCTGGATT+TGG 0.270901 1_4:-4556651 Msa0144970:intron
CACTAAAACTGTTAATTAAA+AGG 0.277798 1_4:+4555581 None:intergenic
ACTCGTCGTTCGCTTGGTTA+TGG 0.285708 1_4:-4560288 Msa0144970:CDS
GATCCTCTGCTGACACCATT+TGG 0.296178 1_4:+4558358 None:intergenic
TAAGGTTACCGGCATGCTTC+TGG 0.306768 1_4:-4556001 Msa0144970:CDS
TATCAGCAGCAGCTTGTTCC+TGG 0.324866 1_4:-4556627 Msa0144970:CDS
TCGGTTGTTTATTTCACTCT+TGG 0.326107 1_4:-4555617 Msa0144970:three_prime_UTR
AAGGAAATGTTCTCTGAGTT+TGG 0.327154 1_4:-4558514 Msa0144970:CDS
CTCTTGTATGGTTAGATGCT+TGG 0.332525 1_4:-4556072 Msa0144970:intron
TTATTCAGCGGCTAGGGCTT+TGG 0.337471 1_4:-4560125 Msa0144970:intron
CAGAATCCTCAGCCTCAAAT+TGG 0.340771 1_4:+4559013 None:intergenic
GGTTAGGGTTTGTAGGGATT+TGG 0.342224 1_4:-4560313 Msa0144970:CDS
CAGACCTGCTGCTGCATCAT+TGG 0.343150 1_4:+4556483 None:intergenic
TCTGAACAACAAATCTATTA+GGG 0.353328 1_4:-4560083 Msa0144970:CDS
ATCCTCTGCTGACACCATTT+GGG 0.353883 1_4:+4558359 None:intergenic
GATGGTAGGTCGAAATGTTT+TGG 0.354440 1_4:-4558769 Msa0144970:CDS
TGGTTTCGGTTAGGGTTTGT+AGG 0.361667 1_4:-4560320 Msa0144970:CDS
CTTCCGTAAATGACTCTGAT+AGG 0.368207 1_4:+4558857 None:intergenic
GCTTTAGGATTACCAACAAT+TGG 0.368775 1_4:-4555653 Msa0144970:three_prime_UTR
CTCTACCCTCCTGGTACTCC+TGG 0.376806 1_4:-4557051 Msa0144970:CDS
CTTTGTTCCAATGGTTCAGC+AGG 0.383917 1_4:-4556571 Msa0144970:CDS
TGGACAAGTGGTTTCGGTTA+GGG 0.384091 1_4:-4560328 Msa0144970:CDS
AGGAGGGTAGAGTGGCATTC+GGG 0.388711 1_4:+4557062 None:intergenic
ACCCATGCCCATTCATGCTT+TGG 0.389513 1_4:-4556242 Msa0144970:CDS
TTTAGTTTGATAATGTTTGT+TGG 0.394362 1_4:-4555736 Msa0144970:three_prime_UTR
TCAATCAAATGCAATACTTC+AGG 0.395049 1_4:+4555967 None:intergenic
TTGGACAAGTGGTTTCGGTT+AGG 0.396239 1_4:-4560329 Msa0144970:CDS
AAACCTATCAGAGTCATTTA+CGG 0.396873 1_4:-4558860 Msa0144970:CDS
GCATCATTGGCACTTGCTGT+GGG 0.397308 1_4:+4556496 None:intergenic
CCAAAGCCCATAACAAAACT+AGG 0.398671 1_4:-4560769 None:intergenic
TCAGGTTCAGCATCAAATTC+CGG 0.399929 1_4:-4560481 Msa0144970:CDS
AAAATGAATTTGGAGCTTAT+GGG 0.402355 1_4:-4558825 Msa0144970:CDS
ACTTGTGGAGGCATCATAGC+TGG 0.406997 1_4:+4556994 None:intergenic
TACGATCACTTTAATCAAGT+TGG 0.414109 1_4:-4560348 Msa0144970:CDS
TCAAGTTGGACAAGTGGTTT+CGG 0.415703 1_4:-4560334 Msa0144970:CDS
AACCCGCCGGTGATCGGAAC+GGG 0.416161 1_4:+4560628 None:intergenic
TGCTGTAGCCAAAGCATGAA+TGG 0.417507 1_4:+4556234 None:intergenic
TTGGCTACTCGTCGTTCGCT+TGG 0.419741 1_4:-4560294 Msa0144970:CDS
CACCAGGGCGCTGACCTTGT+TGG 0.423565 1_4:+4556547 None:intergenic
TGTTGGCCCTGCTGAACCAT+TGG 0.424438 1_4:+4556564 None:intergenic
ACTTTAGCCTTGAGAGCATC+TGG 0.424674 1_4:+4555940 None:intergenic
CAGGAGGGTAGAGTGGCATT+CGG 0.428140 1_4:+4557061 None:intergenic
AATGGTGTCAGCAGAGGATC+TGG 0.430305 1_4:-4558355 Msa0144970:CDS
GATTCAGCAGCTAAGGTTAC+CGG 0.435182 1_4:-4556012 Msa0144970:CDS
TGCATCATTGGCACTTGCTG+TGG 0.436359 1_4:+4556495 None:intergenic
TGGCAAACCTCCCATGTCAT+AGG 0.438185 1_4:+4556282 None:intergenic
AGATAGAAGAGCAAGATTGC+AGG 0.438389 1_4:-4558133 Msa0144970:intron
TTGTTGTTTATTCAGCGGCT+AGG 0.443885 1_4:-4560132 Msa0144970:intron
CTTGGACAACAATTTATGTA+TGG 0.445463 1_4:-4557027 Msa0144970:CDS
GGACCTCCTCGGCGTCCACC+AGG 0.449158 1_4:+4556531 None:intergenic
ACAGAAGGTGTAATTGCAAC+AGG 0.450131 1_4:+4557090 None:intergenic
GTGCCGCTCTTGCGACTACT+AGG 0.451348 1_4:+4560040 None:intergenic
CGTGTTTATCGCTACCCTCC+TGG 0.451898 1_4:-4556358 Msa0144970:CDS
GGTGGACGCCGAGGAGGTCC+TGG 0.452687 1_4:-4556528 Msa0144970:CDS
GCCAAGCTACTTTGTTCCAA+TGG 0.453307 1_4:-4556580 Msa0144970:CDS
CTTGTTCCTGGGATGAGACC+TGG 0.460712 1_4:-4556615 Msa0144970:CDS
CCGTTTGAAGGTGCTGGAAT+CGG 0.466182 1_4:+4560456 None:intergenic
CCTCCTGGTACTCCTGGTCT+TGG 0.467154 1_4:-4557045 Msa0144970:CDS
AATTGGATTTATGGATCTAT+CGG 0.467335 1_4:-4555636 Msa0144970:three_prime_UTR
TGGATAAACCCGCCGGTGAT+CGG 0.467982 1_4:+4560622 None:intergenic
AATGACAAGCAGGTGTTTGT+GGG 0.470614 1_4:-4558952 Msa0144970:CDS
ACAGCTCTTGATGCTTCCTC+TGG 0.471511 1_4:+4558313 None:intergenic
AGATCCATAAATCCAATTGT+TGG 0.475065 1_4:+4555641 None:intergenic
GGTTTCGGTTAGGGTTTGTA+GGG 0.477071 1_4:-4560319 Msa0144970:CDS
TCTGGTCAGTCTAAAGGCTA+TGG 0.478122 1_4:-4559042 Msa0144970:CDS
TACCGGCATGCTTCTGGAGA+TGG 0.481524 1_4:-4555995 Msa0144970:CDS
ATCATTGGCACTTGCTGTGG+GGG 0.483844 1_4:+4556498 None:intergenic
GATAATGTTTGTTGGCATCA+AGG 0.484931 1_4:-4555728 Msa0144970:three_prime_UTR
TGTTAATTTCACTAACCCTC+AGG 0.485000 1_4:-4560262 Msa0144970:CDS
CAATGACAAGCAGGTGTTTG+TGG 0.487408 1_4:-4558953 Msa0144970:CDS
GAAACGACGCTGCCGTTTGA+AGG 0.492756 1_4:+4560444 None:intergenic
GATTTGTGAAGAAGTTTCAA+TGG 0.495102 1_4:-4560511 Msa0144970:exon
CTTGTGGAGGCATCATAGCT+GGG 0.501490 1_4:+4556995 None:intergenic
TGTTGTTTATTCAGCGGCTA+GGG 0.503322 1_4:-4560131 Msa0144970:intron
TAGCGATAAACACGTTGCCT+TGG 0.505854 1_4:+4556367 None:intergenic
TGTCCAAGACCAGGAGTACC+AGG 0.506114 1_4:+4557042 None:intergenic
TTACAGTCCTCTGCTGTTCA+GGG 0.507255 1_4:+4556197 None:intergenic
GATGGTTCTGGTCAGTCTAA+AGG 0.507826 1_4:-4559048 Msa0144970:CDS
CATCAAAACAGCACTAGTAA+TGG 0.509723 1_4:+4558801 None:intergenic
AAAATAGCAACTGATGGTTC+TGG 0.512739 1_4:-4559060 Msa0144970:CDS
CAGATTATGCGAGACCCAAA+TGG 0.514056 1_4:-4558373 Msa0144970:CDS
AGTGCCAATGATGCAGCAGC+AGG 0.515523 1_4:-4556487 Msa0144970:intron
TCTTGAATGTTGCTGCGACC+AGG 0.516671 1_4:+4556340 None:intergenic
GGCATTCGGGGCGCAACAGA+AGG 0.519691 1_4:+4557075 None:intergenic
TGGCACAATTACTTCGTACA+AGG 0.519922 1_4:-4558494 Msa0144970:intron
GAAGGTGCTGGAATCGGTGC+CGG 0.521583 1_4:+4560462 None:intergenic
CTAATAGATTTGTTGTTCAG+AGG 0.526125 1_4:+4560085 None:intergenic
GGCCAACAAGGTCAGCGCCC+TGG 0.527805 1_4:-4556549 Msa0144970:CDS
GTTGTTGACCAGGACCTCCT+CGG 0.528383 1_4:+4556520 None:intergenic
TTGCAGCTTGGAGAGATGAA+TGG 0.529066 1_4:-4558207 Msa0144970:intron
TCTGTAGTAGACAAATTTCA+AGG 0.530372 1_4:-4558589 Msa0144970:CDS
GGCTAAAGTTGCTGAAGCCA+TGG 0.530907 1_4:-4555926 Msa0144970:CDS
GTATATAAACGAAACGAAAG+TGG 0.532897 1_4:+4560742 None:intergenic
ACGCTGCCGTTTGAAGGTGC+TGG 0.534574 1_4:+4560450 None:intergenic
GTATCCGCTAGTAGATCAGC+TGG 0.539041 1_4:-4556040 Msa0144970:CDS
GCTGTAGCCAAAGCATGAAT+GGG 0.539748 1_4:+4556235 None:intergenic
CATCATTGGCACTTGCTGTG+GGG 0.539865 1_4:+4556497 None:intergenic
TTCCCGTTCCGATCACCGGC+GGG 0.540872 1_4:-4560630 Msa0144970:five_prime_UTR
AGTGAGGCTAGTTGATCCGC+CGG 0.541519 1_4:+4555865 None:intergenic
TGAGTCACCAGATGCTCTCA+AGG 0.542342 1_4:-4555947 Msa0144970:CDS
ACTATTCCCGTTCCGATCAC+CGG 0.546514 1_4:-4560634 Msa0144970:five_prime_UTR
AAGGTTTGAGCAGACTGTAA+AGG 0.546711 1_4:-4558614 Msa0144970:CDS
GGAACATGATTCAGCAGCTA+AGG 0.546851 1_4:-4556019 Msa0144970:CDS
ATCAGCAGCAGCTTGTTCCT+GGG 0.547574 1_4:-4556626 Msa0144970:CDS
CCGATTCCAGCACCTTCAAA+CGG 0.550647 1_4:-4560456 Msa0144970:CDS
CGCCCTGGTGGACGCCGAGG+AGG 0.553565 1_4:-4556534 Msa0144970:CDS
AACATTTCTCAAAACCTCCA+TGG 0.553981 1_4:+4555909 None:intergenic
AAGGCTGCACTGCACCGCAA+TGG 0.556229 1_4:+4560702 None:intergenic
ACCATTGGAACAAAGTAGCT+TGG 0.559188 1_4:+4556579 None:intergenic
ACATTATCAAACTAAAAGAC+CGG 0.560523 1_4:+4555743 None:intergenic
GACCTCCTCGGCGTCCACCA+GGG 0.561701 1_4:+4556532 None:intergenic
GTCCATCTCCAGAAGCATGC+CGG 0.562964 1_4:+4555993 None:intergenic
TGTTGCTGTTGCACAGCGAA+AGG 0.568244 1_4:-4558157 Msa0144970:CDS
CTTTAATCAAGTTGGACAAG+TGG 0.569030 1_4:-4560340 Msa0144970:CDS
CGAATGCCACTCTACCCTCC+TGG 0.569240 1_4:-4557060 Msa0144970:CDS
CAAAGCCCATAACAAAACTA+GGG 0.573750 1_4:-4560768 None:intergenic
GACGTCGTAACGAACTGATT+CGG 0.574989 1_4:+4560417 None:intergenic
TATGATAATCATACTTGTGG+AGG 0.575760 1_4:+4556982 None:intergenic
ACAGTCCTCTGCTGTTCAGG+GGG 0.577307 1_4:+4556199 None:intergenic
GATGACAAGGAGTGGTATGT+TGG 0.578166 1_4:-4558679 Msa0144970:CDS
GGAGTACCAGGAGGGTAGAG+TGG 0.578299 1_4:+4557054 None:intergenic
AGATGCTGCTAAAGCTGTTG+AGG 0.579437 1_4:-4558722 Msa0144970:CDS
GCCCCTGTGCAAAACATTGG+TGG 0.580664 1_4:-4556316 Msa0144970:CDS
GTATGGTTAGATGCTTGGAG+AGG 0.583459 1_4:-4556067 Msa0144970:intron
ATGGTTCAGCAGGGCCAACA+AGG 0.583994 1_4:-4556561 Msa0144970:CDS
CCTGGGATGAGACCTGGTGG+TGG 0.588301 1_4:-4556609 Msa0144970:CDS
GGAACAAAGTAGCTTGGCAT+AGG 0.588556 1_4:+4556585 None:intergenic
AGCCAAAGCATGAATGGGCA+TGG 0.590578 1_4:+4556240 None:intergenic
AATTTCACTAACCCTCAGGA+TGG 0.592051 1_4:-4560258 Msa0144970:intron
GTTACGACGTCGTTGTACGT+TGG 0.592079 1_4:-4560405 Msa0144970:CDS
AACGAAACTAACCATCCTGA+GGG 0.595204 1_4:+4560247 None:intergenic
CCACCACCAGGTCTCATCCC+AGG 0.598755 1_4:+4556609 None:intergenic
ATTCCCGTTCCGATCACCGG+CGG 0.601369 1_4:-4560631 Msa0144970:five_prime_UTR
TCAAATGCAATACTTCAGGC+TGG 0.601392 1_4:+4555971 None:intergenic
CAACAATTTATGTATGGCCA+AGG 0.601992 1_4:-4557021 Msa0144970:CDS
TCTTGCAAAATAGCAACTGA+TGG 0.602362 1_4:-4559066 Msa0144970:CDS
ATGGGTGGAATTCATGTAGA+CGG 0.603114 1_4:+4555812 None:intergenic
AAAGCTGTTGAGGCATTGAA+TGG 0.605011 1_4:-4558712 Msa0144970:CDS
TACAGTCCTCTGCTGTTCAG+GGG 0.607977 1_4:+4556198 None:intergenic
GAACGTGAGCAAGAGCTGAA+AGG 0.610322 1_4:-4558637 Msa0144970:CDS
AAACCCGCCGGTGATCGGAA+CGG 0.610598 1_4:+4560627 None:intergenic
TTGTGGAGGCATCATAGCTG+GGG 0.612919 1_4:+4556996 None:intergenic
AAAGCATGAATGGGCATGGG+TGG 0.613260 1_4:+4556244 None:intergenic
GTGAGCAAGAGCTGAAAGGA+AGG 0.614410 1_4:-4558633 Msa0144970:CDS
AGAAATGTTACTCAACAGCA+AGG 0.614788 1_4:-4555895 Msa0144970:CDS
TGAATGTTGCTGCGACCAGG+AGG 0.615427 1_4:+4556343 None:intergenic
CAGCGCCCTGGTGGACGCCG+AGG 0.618945 1_4:-4556537 Msa0144970:CDS
GACCCAAATGGTGTCAGCAG+AGG 0.620312 1_4:-4558361 Msa0144970:CDS
AGAGTCGTTGAGAGAGAGTG+AGG 0.620798 1_4:+4555849 None:intergenic
AATGTTGATCAATGACAAGC+AGG 0.622205 1_4:-4558962 Msa0144970:CDS
TGATGAGAGATGCTGATGGT+AGG 0.623806 1_4:-4558783 Msa0144970:CDS
GGAGGGTAGAGTGGCATTCG+GGG 0.625817 1_4:+4557063 None:intergenic
TTTGTTCCAATGGTTCAGCA+GGG 0.626797 1_4:-4556570 Msa0144970:CDS
GTGAGGCTAGTTGATCCGCC+GGG 0.627783 1_4:+4555866 None:intergenic
TGTGGAGGCATCATAGCTGG+GGG 0.627960 1_4:+4556997 None:intergenic
TATCTCTATCTTGCTTACGT+AGG 0.631591 1_4:+4558923 None:intergenic
AGGAATGATGTCCTATGACA+TGG 0.633264 1_4:-4556293 Msa0144970:CDS
GATGCCCCTGTGCAAAACAT+TGG 0.633837 1_4:-4556319 Msa0144970:CDS
GCCAAAGCATGAATGGGCAT+GGG 0.635175 1_4:+4556241 None:intergenic
ATAAATTGTTGTCCAAGACC+AGG 0.638542 1_4:+4557033 None:intergenic
TCAACAGCAAGGAAACAGCC+CGG 0.646568 1_4:-4555884 Msa0144970:CDS
CAACGAAACTAACCATCCTG+AGG 0.649245 1_4:+4560246 None:intergenic
CCTGTGCAAAACATTGGTGG+AGG 0.654336 1_4:-4556313 Msa0144970:CDS
GTTCCTGGGATGAGACCTGG+TGG 0.655055 1_4:-4556612 Msa0144970:CDS
TGTGCAACAGCAACATAGAG+AGG 0.660072 1_4:+4558165 None:intergenic
GATCCTAGTAGTCGCAAGAG+CGG 0.660494 1_4:-4560043 Msa0144970:CDS
GGAATGATGTCCTATGACAT+GGG 0.661604 1_4:-4556292 Msa0144970:CDS
CTTGGCATAGGACCACCACC+AGG 0.662106 1_4:+4556597 None:intergenic
GAATGTTGCTGCGACCAGGA+GGG 0.664998 1_4:+4556344 None:intergenic
TAAAGTTGCTGAAGCCATGG+AGG 0.667343 1_4:-4555923 Msa0144970:CDS
CAAGACCAGGAGTACCAGGA+GGG 0.671251 1_4:+4557046 None:intergenic
GGTGGTACAACATCACGAAG+TGG 0.685790 1_4:+4556262 None:intergenic
CGGAACGGGAATAGTATCAG+CGG 0.687230 1_4:+4560642 None:intergenic
TGTTCCAGCTGATCTACTAG+CGG 0.690170 1_4:+4556036 None:intergenic
AAAACACGTAAGCACCATTG+CGG 0.698048 1_4:-4560716 Msa0144970:five_prime_UTR
GTTGTACGTTGGTGATCTTG+AGG 0.704303 1_4:-4560394 Msa0144970:CDS
CAACAAGGTCAGCGCCCTGG+TGG 0.709951 1_4:-4556546 Msa0144970:CDS
ATGATGTCCTATGACATGGG+AGG 0.725560 1_4:-4556289 Msa0144970:CDS
CCAAGACCAGGAGTACCAGG+AGG 0.726994 1_4:+4557045 None:intergenic
ACAGCAAGGAAACAGCCCGG+CGG 0.789531 1_4:-4555881 Msa0144970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+CGG + chr1_4:4560495-4560514 None:intergenic 0.0%
!! TATAAGAAATAAGAAAAAAA+GGG + chr1_4:4559055-4559074 None:intergenic 10.0%
!! ATATAAGAAATAAGAAAAAA+AGG + chr1_4:4559056-4559075 None:intergenic 10.0%
!!! TTTTTTTCTTATTTCTTATA+TGG - chr1_4:4559055-4559074 Msa0144970:CDS 10.0%
!! AAAAAAAAAAAAAAAAAACG+GGG + chr1_4:4560493-4560512 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTTTGC+CGG - chr1_4:4560497-4560516 Msa0144970:exon 10.0%
!!! AAAAGTTTCAGTTTTTTTTT+TGG + chr1_4:4555667-4555686 None:intergenic 15.0%
!!! ATTTTATATGTTTTGTGATT+AGG - chr1_4:4556059-4556078 Msa0144970:CDS 15.0%
!!! TTTTATATGTTTTGTGATTA+GGG - chr1_4:4556060-4556079 Msa0144970:CDS 15.0%
!! ATTATGAATATTTATCACAT+TGG - chr1_4:4556348-4556367 Msa0144970:CDS 15.0%
!! ATAAGAAATAAGAAAAAAAG+GGG + chr1_4:4559054-4559073 None:intergenic 15.0%
!!! TGATAAATTTTGAACTAAAT+TGG + chr1_4:4559575-4559594 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAAACGG+GGG + chr1_4:4560492-4560511 None:intergenic 15.0%
!!! CTGAAATTTTTTTGGTTTTT+GGG + chr1_4:4555592-4555611 None:intergenic 20.0%
!!! ACTGAAATTTTTTTGGTTTT+TGG + chr1_4:4555593-4555612 None:intergenic 20.0%
!!! TCAGTTTTTTTTTTGGATTT+TGG + chr1_4:4555660-4555679 None:intergenic 20.0%
!!! ACACTAAATTGATAGTATAT+TGG + chr1_4:4556451-4556470 None:intergenic 20.0%
!!! ACTATCAATTTAGTGTTTTA+AGG - chr1_4:4556455-4556474 Msa0144970:intron 20.0%
!!! ATGAAAATAAGTTGAGTTTA+TGG - chr1_4:4556701-4556720 Msa0144970:intron 20.0%
!!! GAATTTATGAAAATAGCTTT+TGG + chr1_4:4556795-4556814 None:intergenic 20.0%
!! TATATCCATAGTTTAATCAA+TGG - chr1_4:4556874-4556893 Msa0144970:intron 20.0%
!! AATGCAATTGATAAGTTAAA+TGG - chr1_4:4557274-4557293 Msa0144970:intron 20.0%
!!! ATGGGTTAAAAGAATTTAAT+TGG + chr1_4:4557859-4557878 None:intergenic 20.0%
!!! TTTCATGTTTAAGTTAATCA+AGG + chr1_4:4558343-4558362 None:intergenic 20.0%
!! CACAATTATCATACAATATA+TGG + chr1_4:4558399-4558418 None:intergenic 20.0%
!!! TTCAAGAATCTTTTTTTCAT+TGG - chr1_4:4558425-4558444 Msa0144970:intron 20.0%
!!! TCAAGAATCTTTTTTTCATT+GGG - chr1_4:4558426-4558445 Msa0144970:intron 20.0%
!! AAATATGATAATCATACTTG+TGG + chr1_4:4559283-4559302 None:intergenic 20.0%
!! AAAAAAAAAAAAAAAACGGG+GGG + chr1_4:4560491-4560510 None:intergenic 20.0%
!!! TTTAGTTTGATAATGTTTGT+TGG - chr1_4:4560523-4560542 Msa0144970:five_prime_UTR 20.0%
!! CACTAAAACTGTTAATTAAA+AGG + chr1_4:4560681-4560700 None:intergenic 20.0%
!!! AATTTTTTTGGTTTTTGGGA+GGG + chr1_4:4555588-4555607 None:intergenic 25.0%
!!! AAATTTTTTTGGTTTTTGGG+AGG + chr1_4:4555589-4555608 None:intergenic 25.0%
!!! TTTTTTTGCAGAACTGATTA+GGG - chr1_4:4555683-4555702 Msa0144970:three_prime_UTR 25.0%
! TCTGAACAACAAATCTATTA+GGG - chr1_4:4556176-4556195 Msa0144970:intron 25.0%
!!! CACTGCTAATATTTTTATCA+AGG - chr1_4:4556239-4556258 Msa0144970:CDS 25.0%
!!! GCATTTTTTATCTCTTATCT+TGG - chr1_4:4556263-4556282 Msa0144970:CDS 25.0%
! CTTATCTTGGTAGAATTTAT+AGG - chr1_4:4556276-4556295 Msa0144970:CDS 25.0%
! AATTTATAGGCAGTTTAATC+AGG - chr1_4:4556289-4556308 Msa0144970:CDS 25.0%
! ACAATAAGTCGTTAAATGTA+GGG + chr1_4:4556375-4556394 None:intergenic 25.0%
! CTCAGATGTTTATTTCAAAA+AGG + chr1_4:4556526-4556545 None:intergenic 25.0%
! TTTGCCTATTTGACTAATAA+AGG - chr1_4:4556553-4556572 Msa0144970:CDS 25.0%
!! GCTTATAACTGTTTTGTATA+TGG - chr1_4:4556643-4556662 Msa0144970:intron 25.0%
!! TAACTGTTTTGTATATGGTA+TGG - chr1_4:4556648-4556667 Msa0144970:intron 25.0%
!! AACTGTTTTGTATATGGTAT+GGG - chr1_4:4556649-4556668 Msa0144970:intron 25.0%
!!! GTTGTTTTTAGAAGCTATAT+TGG - chr1_4:4556671-4556690 Msa0144970:intron 25.0%
!!! GTTGTTTTTAGAAGCTATAT+TGG - chr1_4:4556671-4556690 Msa0144970:intron 25.0%
! CATAAATTTAGAGACTGTTT+GGG + chr1_4:4556819-4556838 None:intergenic 25.0%
! ACATAAATTTAGAGACTGTT+TGG + chr1_4:4556820-4556839 None:intergenic 25.0%
! AGTCTCTAAATTTATGTCAA+TGG - chr1_4:4556823-4556842 Msa0144970:intron 25.0%
!! CAATTCCATTGATTAAACTA+TGG + chr1_4:4556882-4556901 None:intergenic 25.0%
! CATAGTTTAATCAATGGAAT+TGG - chr1_4:4556880-4556899 Msa0144970:intron 25.0%
!!! ATTGGTTTTTATGATGTTGT+TGG - chr1_4:4557096-4557115 Msa0144970:CDS 25.0%
! GATGACTTGAAAAATGAATT+TGG - chr1_4:4557424-4557443 Msa0144970:intron 25.0%
!! AAAAATGAATTTGGAGCTTA+TGG - chr1_4:4557433-4557452 Msa0144970:intron 25.0%
!! AAAATGAATTTGGAGCTTAT+GGG - chr1_4:4557434-4557453 Msa0144970:intron 25.0%
! AAAAAAAGATTCTTGAAGCT+AGG + chr1_4:4558422-4558441 None:intergenic 25.0%
! TTTGTTGCCAAATTAAAGAT+AGG - chr1_4:4558704-4558723 Msa0144970:CDS 25.0%
!! TTTTCCGAGTTAAATAACAT+TGG - chr1_4:4558963-4558982 Msa0144970:CDS 25.0%
!! CAAACCAATGTTATTTAACT+CGG + chr1_4:4558970-4558989 None:intergenic 25.0%
! AACAAAATAACAGCTGAATA+TGG + chr1_4:4559312-4559331 None:intergenic 25.0%
! AAAACAAAGTCAAAATGAAC+AGG + chr1_4:4559405-4559424 None:intergenic 25.0%
!!! TTTTGACTTTGTTTTACTTG+TGG - chr1_4:4559410-4559429 Msa0144970:intron 25.0%
!!! TTTGACTTTGTTTTACTTGT+GGG - chr1_4:4559411-4559430 Msa0144970:intron 25.0%
! CAAAACATGTTATATGTGAA+GGG + chr1_4:4559486-4559505 None:intergenic 25.0%
! ATCACTTCAATAATAAATGC+AGG - chr1_4:4559598-4559617 Msa0144970:intron 25.0%
! TATACTCATCTTTCATATTG+AGG - chr1_4:4559832-4559851 Msa0144970:intron 25.0%
!! TGCTAATATTTCTGCAAATT+TGG - chr1_4:4560097-4560116 Msa0144970:CDS 25.0%
!! GCTAATATTTCTGCAAATTT+GGG - chr1_4:4560098-4560117 Msa0144970:CDS 25.0%
! ACAAGAGAAAATATCAGTAA+AGG + chr1_4:4560174-4560193 None:intergenic 25.0%
!! TACTGATATTTTCTCTTGTA+TGG - chr1_4:4560175-4560194 Msa0144970:intron 25.0%
! ACATTATCAAACTAAAAGAC+CGG + chr1_4:4560519-4560538 None:intergenic 25.0%
!!! TTTTTATTTGGTCATGCTTT+AGG - chr1_4:4560591-4560610 Msa0144970:five_prime_UTR 25.0%
! ATTACCAACAATTGGATTTA+TGG - chr1_4:4560614-4560633 Msa0144970:five_prime_UTR 25.0%
! AATTGGATTTATGGATCTAT+CGG - chr1_4:4560623-4560642 Msa0144970:five_prime_UTR 25.0%
GTATATAAACGAAACGAAAG+TGG + chr1_4:4555520-4555539 None:intergenic 30.0%
!!! CGGAGAAACTGAAATTTTTT+TGG + chr1_4:4555600-4555619 None:intergenic 30.0%
!!! CTTTTTTTGCAGAACTGATT+AGG - chr1_4:4555682-4555701 Msa0144970:three_prime_UTR 30.0%
GATTTGTGAAGAAGTTTCAA+TGG - chr1_4:4555748-4555767 Msa0144970:three_prime_UTR 30.0%
TACGATCACTTTAATCAAGT+TGG - chr1_4:4555911-4555930 Msa0144970:CDS 30.0%
! ATGTTTTGTGATTAGGGTTT+TGG - chr1_4:4556066-4556085 Msa0144970:intron 30.0%
!! TGTTGTTGTTGTTTATTCAG+CGG - chr1_4:4556122-4556141 Msa0144970:intron 30.0%
!! CTAATAGATTTGTTGTTCAG+AGG + chr1_4:4556177-4556196 None:intergenic 30.0%
CTCTGAACAACAAATCTATT+AGG - chr1_4:4556175-4556194 Msa0144970:intron 30.0%
!! ATAATCTCCTGTATCGATTT+CGG + chr1_4:4556333-4556352 None:intergenic 30.0%
GACAATAAGTCGTTAAATGT+AGG + chr1_4:4556376-4556395 None:intergenic 30.0%
TTAACGACTTATTGTCAAGT+AGG - chr1_4:4556380-4556399 Msa0144970:intron 30.0%
ATGTAAAATTTGAGAGTAGC+AGG - chr1_4:4556498-4556517 Msa0144970:CDS 30.0%
TGTAAAATTTGAGAGTAGCA+GGG - chr1_4:4556499-4556518 Msa0144970:CDS 30.0%
TCAGCCTTTATTAGTCAAAT+AGG + chr1_4:4556560-4556579 None:intergenic 30.0%
CTTAAATAAGCCAATCAAAC+AGG - chr1_4:4556851-4556870 Msa0144970:intron 30.0%
TATGGATATACCTGTTTGAT+TGG + chr1_4:4556864-4556883 None:intergenic 30.0%
! AATGGAATTGGAATTAGTCT+TGG - chr1_4:4556892-4556911 Msa0144970:intron 30.0%
ACAAGACATATACAACTAAG+TGG + chr1_4:4556977-4556996 None:intergenic 30.0%
CTTGATTTATGTGAGTAGTT+TGG - chr1_4:4557029-4557048 Msa0144970:CDS 30.0%
CAACATCATAAAAACCAATC+AGG + chr1_4:4557095-4557114 None:intergenic 30.0%
!!! CATGACACTTTTTCTTCTTT+CGG - chr1_4:4557160-4557179 Msa0144970:intron 30.0%
AAACCTATCAGAGTCATTTA+CGG - chr1_4:4557399-4557418 Msa0144970:intron 30.0%
!! TGGTAAAAAAGTTGATGACA+AGG - chr1_4:4557567-4557586 Msa0144970:intron 30.0%
TCTGTAGTAGACAAATTTCA+AGG - chr1_4:4557670-4557689 Msa0144970:intron 30.0%
GAACTTGTATCTCAAAAACT+TGG - chr1_4:4557696-4557715 Msa0144970:intron 30.0%
! CTTGAGTTTTTCATCAGTAA+TGG + chr1_4:4557728-4557747 None:intergenic 30.0%
CATTACTGATGAAAAACTCA+AGG - chr1_4:4557726-4557745 Msa0144970:intron 30.0%
!! CTTTTAACTGATATCTGTGT+CGG - chr1_4:4557802-4557821 Msa0144970:intron 30.0%
! AGCTGTAAGTCTAAAACTAT+TGG - chr1_4:4557963-4557982 Msa0144970:intron 30.0%
! TGTAAGTCTAAAACTATTGG+TGG - chr1_4:4557966-4557985 Msa0144970:intron 30.0%
TACAAGAAACTTTGTAAGAG+AGG - chr1_4:4558215-4558234 Msa0144970:intron 30.0%
ACAAGAAACTTTGTAAGAGA+GGG - chr1_4:4558216-4558235 Msa0144970:intron 30.0%
AAATTAAAGATAGGAGTGGT+GGG - chr1_4:4558713-4558732 Msa0144970:CDS 30.0%
ACTATATAGAGTAAGGGAAA+TGG + chr1_4:4559030-4559049 None:intergenic 30.0%
TATGGTCTATGATATGTTTG+CGG - chr1_4:4559073-4559092 Msa0144970:CDS 30.0%
CTTAATTACTTTCTTCATGC+AGG - chr1_4:4559126-4559145 Msa0144970:CDS 30.0%
CTTGGACAACAATTTATGTA+TGG - chr1_4:4559232-4559251 Msa0144970:intron 30.0%
TATGATAATCATACTTGTGG+AGG + chr1_4:4559280-4559299 None:intergenic 30.0%
! AGTTTTGCATCAGTATAACA+AGG + chr1_4:4559437-4559456 None:intergenic 30.0%
TTATACTGATGCAAAACTGT+GGG - chr1_4:4559439-4559458 Msa0144970:intron 30.0%
GCAAAACATGTTATATGTGA+AGG + chr1_4:4559487-4559506 None:intergenic 30.0%
CAGAAATATTAGCAGCAAAA+AGG + chr1_4:4560091-4560110 None:intergenic 30.0%
TCAATCAAATGCAATACTTC+AGG + chr1_4:4560295-4560314 None:intergenic 30.0%
AGATCCATAAATCCAATTGT+TGG + chr1_4:4560621-4560640 None:intergenic 30.0%
!!! AATGGTGCTTACGTGTTTTT+TGG + chr1_4:4555542-4555561 None:intergenic 35.0%
!! CTTTAATCAAGTTGGACAAG+TGG - chr1_4:4555919-4555938 Msa0144970:CDS 35.0%
TGTTAATTTCACTAACCCTC+AGG - chr1_4:4555997-4556016 Msa0144970:CDS 35.0%
!! TTAGGGTTTTGGTGAAATTG+TGG - chr1_4:4556077-4556096 Msa0144970:intron 35.0%
!! GACTAATAAAGGCTGATTTG+AGG - chr1_4:4556564-4556583 Msa0144970:CDS 35.0%
TCAATTGAACTGAACCTGAT+TGG - chr1_4:4557078-4557097 Msa0144970:CDS 35.0%
TCTTGCAAAATAGCAACTGA+TGG - chr1_4:4557193-4557212 Msa0144970:intron 35.0%
AAAATAGCAACTGATGGTTC+TGG - chr1_4:4557199-4557218 Msa0144970:intron 35.0%
!!! CTATGGTTTTGTCCAATTTG+AGG - chr1_4:4557234-4557253 Msa0144970:intron 35.0%
AATGTTGATCAATGACAAGC+AGG - chr1_4:4557297-4557316 Msa0144970:intron 35.0%
TATCTCTATCTTGCTTACGT+AGG + chr1_4:4557339-4557358 None:intergenic 35.0%
CATCAAAACAGCACTAGTAA+TGG + chr1_4:4557461-4557480 None:intergenic 35.0%
!! AAAAAGTTGATGACAAGGAG+TGG - chr1_4:4557572-4557591 Msa0144970:intron 35.0%
AAGGAAATGTTCTCTGAGTT+TGG - chr1_4:4557745-4557764 Msa0144970:intron 35.0%
!!! TTTTTTAATGCTGCAGACGT+TGG - chr1_4:4557833-4557852 Msa0144970:intron 35.0%
CGCATAATCTGCAGTATTAT+GGG + chr1_4:4557877-4557896 None:intergenic 35.0%
TCGCATAATCTGCAGTATTA+TGG + chr1_4:4557878-4557897 None:intergenic 35.0%
!!! CAGAAACCTCTCGTTTTTTA+TGG - chr1_4:4558303-4558322 Msa0144970:intron 35.0%
TGCAAACCATAAAAAACGAG+AGG + chr1_4:4558312-4558331 None:intergenic 35.0%
AGACATTCTCACAGTATACA+AGG + chr1_4:4558487-4558506 None:intergenic 35.0%
TGCCAAATTAAAGATAGGAG+TGG - chr1_4:4558709-4558728 Msa0144970:CDS 35.0%
CACCACTCCTATCTTTAATT+TGG + chr1_4:4558714-4558733 None:intergenic 35.0%
CAAATTAAAGATAGGAGTGG+TGG - chr1_4:4558712-4558731 Msa0144970:CDS 35.0%
! TTTGACTTTGACTAACGTCT+TGG - chr1_4:4558919-4558938 Msa0144970:CDS 35.0%
AAAACTCATCAACTCAGTTG+GGG + chr1_4:4558947-4558966 None:intergenic 35.0%
GAAAACTCATCAACTCAGTT+GGG + chr1_4:4558948-4558967 None:intergenic 35.0%
! AGGCACAATTTTCACAAATG+AGG - chr1_4:4559146-4559165 Msa0144970:intron 35.0%
ATAAATTGTTGTCCAAGACC+AGG + chr1_4:4559229-4559248 None:intergenic 35.0%
CAACAATTTATGTATGGCCA+AGG - chr1_4:4559238-4559257 Msa0144970:intron 35.0%
AAATAACAGCTGAATATGGC+AGG + chr1_4:4559308-4559327 None:intergenic 35.0%
GTTATACTGATGCAAAACTG+TGG - chr1_4:4559438-4559457 Msa0144970:intron 35.0%
CTTCAATAATAAATGCAGGC+TGG - chr1_4:4559602-4559621 Msa0144970:intron 35.0%
TAATAAATGCAGGCTGGATT+TGG - chr1_4:4559608-4559627 Msa0144970:intron 35.0%
!! TTTCATATTGAGGTACTGAC+AGG - chr1_4:4559842-4559861 Msa0144970:intron 35.0%
!! TTCATATTGAGGTACTGACA+GGG - chr1_4:4559843-4559862 Msa0144970:intron 35.0%
TTTCTGCTCTATGATTGTTG+TGG - chr1_4:4560141-4560160 Msa0144970:intron 35.0%
AACATTTCTCAAAACCTCCA+TGG + chr1_4:4560353-4560372 None:intergenic 35.0%
AGAAATGTTACTCAACAGCA+AGG - chr1_4:4560364-4560383 Msa0144970:CDS 35.0%
AAAAAAAAAAAACGGGGGGT+GGG + chr1_4:4560487-4560506 None:intergenic 35.0%
AAAAAAAAAAAAACGGGGGG+TGG + chr1_4:4560488-4560507 None:intergenic 35.0%
! GATAATGTTTGTTGGCATCA+AGG - chr1_4:4560531-4560550 Msa0144970:five_prime_UTR 35.0%
!! GCTTTAGGATTACCAACAAT+TGG - chr1_4:4560606-4560625 Msa0144970:five_prime_UTR 35.0%
TCGGTTGTTTATTTCACTCT+TGG - chr1_4:4560642-4560661 Msa0144970:five_prime_UTR 35.0%
AAAACACGTAAGCACCATTG+CGG - chr1_4:4555543-4555562 Msa0144970:three_prime_UTR 40.0%
TCAGGTTCAGCATCAAATTC+CGG - chr1_4:4555778-4555797 Msa0144970:three_prime_UTR 40.0%
!! TCAAGTTGGACAAGTGGTTT+CGG - chr1_4:4555925-4555944 Msa0144970:CDS 40.0%
AATTTCACTAACCCTCAGGA+TGG - chr1_4:4556001-4556020 Msa0144970:CDS 40.0%
AACGAAACTAACCATCCTGA+GGG + chr1_4:4556015-4556034 None:intergenic 40.0%
!! TTGTTGTTTATTCAGCGGCT+AGG - chr1_4:4556127-4556146 Msa0144970:intron 40.0%
! TGTTGTTTATTCAGCGGCTA+GGG - chr1_4:4556128-4556147 Msa0144970:intron 40.0%
TTTGTCTCCGAAATCGATAC+AGG - chr1_4:4556323-4556342 Msa0144970:CDS 40.0%
TCCACTGAAGAACTAGATAG+TGG - chr1_4:4556931-4556950 Msa0144970:intron 40.0%
CCACTGAAGAACTAGATAGT+GGG - chr1_4:4556932-4556951 Msa0144970:intron 40.0%
! GTTGTTGGTTGTGCAGAATT+TGG - chr1_4:4557111-4557130 Msa0144970:CDS 40.0%
!! TTTTGTCCAATTTGAGGCTG+AGG - chr1_4:4557240-4557259 Msa0144970:intron 40.0%
AATGACAAGCAGGTGTTTGT+GGG - chr1_4:4557307-4557326 Msa0144970:intron 40.0%
CTTCCGTAAATGACTCTGAT+AGG + chr1_4:4557405-4557424 None:intergenic 40.0%
!! GTTTTGATGAGAGATGCTGA+TGG - chr1_4:4557472-4557491 Msa0144970:intron 40.0%
! GATGGTAGGTCGAAATGTTT+TGG - chr1_4:4557490-4557509 Msa0144970:intron 40.0%
!! AAAGCTGTTGAGGCATTGAA+TGG - chr1_4:4557547-4557566 Msa0144970:intron 40.0%
AAGGTTTGAGCAGACTGTAA+AGG - chr1_4:4557645-4557664 Msa0144970:intron 40.0%
TGGCACAATTACTTCGTACA+AGG - chr1_4:4557765-4557784 Msa0144970:intron 40.0%
! TGTTGCATTTTCAACTCCAG+AGG - chr1_4:4557930-4557949 Msa0144970:intron 40.0%
AGATAGAAGAGCAAGATTGC+AGG - chr1_4:4558126-4558145 Msa0144970:intron 40.0%
AAACTTTGTAAGAGAGGGTC+TGG - chr1_4:4558221-4558240 Msa0144970:intron 40.0%
!! CCAATTTTGGTGGGAAAGTT+TGG + chr1_4:4558527-4558546 None:intergenic 40.0%
CCAAACTTTCCCACCAAAAT+TGG - chr1_4:4558524-4558543 Msa0144970:CDS 40.0%
AGTCGAATTTGGACCTTGAA+AGG - chr1_4:4558557-4558576 Msa0144970:CDS 40.0%
!! CTTATTTTCCCTTGCAAGTG+AGG - chr1_4:4558645-4558664 Msa0144970:CDS 40.0%
GGAAAACTCATCAACTCAGT+TGG + chr1_4:4558949-4558968 None:intergenic 40.0%
!! AGGGGCACTATATAGAGTAA+GGG + chr1_4:4559036-4559055 None:intergenic 40.0%
!! AAGGGGCACTATATAGAGTA+AGG + chr1_4:4559037-4559056 None:intergenic 40.0%
GTCTATGATATGTTTGCGGA+GGG - chr1_4:4559077-4559096 Msa0144970:CDS 40.0%
! ACAGAAGGTGTAATTGCAAC+AGG + chr1_4:4559172-4559191 None:intergenic 40.0%
!! ACATGTTTTGCTGTGTATGC+TGG - chr1_4:4559496-4559515 Msa0144970:intron 40.0%
ACCATTGGAACAAAGTAGCT+TGG + chr1_4:4559683-4559702 None:intergenic 40.0%
TTTGTTCCAATGGTTCAGCA+GGG - chr1_4:4559689-4559708 Msa0144970:intron 40.0%
! TTTTTGCTCAGATGCTTCCA+AGG - chr1_4:4559875-4559894 Msa0144970:intron 40.0%
AGGAATGATGTCCTATGACA+TGG - chr1_4:4559966-4559985 Msa0144970:intron 40.0%
GGAATGATGTCCTATGACAT+GGG - chr1_4:4559967-4559986 Msa0144970:intron 40.0%
! TGGGTTCAGTTCTCATGTTT+TGG - chr1_4:4560117-4560136 Msa0144970:CDS 40.0%
CTCTTGTATGGTTAGATGCT+TGG - chr1_4:4560187-4560206 Msa0144970:intron 40.0%
TCAAATGCAATACTTCAGGC+TGG + chr1_4:4560291-4560310 None:intergenic 40.0%
ATGGGTGGAATTCATGTAGA+CGG + chr1_4:4560450-4560469 None:intergenic 40.0%
AAAAAAAAAAACGGGGGGTG+GGG + chr1_4:4560486-4560505 None:intergenic 40.0%
! TGGATTTTGGATAAACCCGC+CGG + chr1_4:4555647-4555666 None:intergenic 45.0%
AGTTTCAATGGCGCAGATTC+AGG - chr1_4:4555760-4555779 Msa0144970:three_prime_UTR 45.0%
GACGTCGTAACGAACTGATT+CGG + chr1_4:4555845-4555864 None:intergenic 45.0%
!! GTTGTACGTTGGTGATCTTG+AGG - chr1_4:4555865-4555884 Msa0144970:CDS 45.0%
TTGGACAAGTGGTTTCGGTT+AGG - chr1_4:4555930-4555949 Msa0144970:CDS 45.0%
TGGACAAGTGGTTTCGGTTA+GGG - chr1_4:4555931-4555950 Msa0144970:CDS 45.0%
TGGTTTCGGTTAGGGTTTGT+AGG - chr1_4:4555939-4555958 Msa0144970:CDS 45.0%
GGTTTCGGTTAGGGTTTGTA+GGG - chr1_4:4555940-4555959 Msa0144970:CDS 45.0%
GGTTAGGGTTTGTAGGGATT+TGG - chr1_4:4555946-4555965 Msa0144970:CDS 45.0%
CAACGAAACTAACCATCCTG+AGG + chr1_4:4556016-4556035 None:intergenic 45.0%
!! AGGCTGATTTGAGGTCTGTT+TGG - chr1_4:4556573-4556592 Msa0144970:CDS 45.0%
!! CCCACTATCTAGTTCTTCAG+TGG + chr1_4:4556935-4556954 None:intergenic 45.0%
!! GATGGTTCTGGTCAGTCTAA+AGG - chr1_4:4557211-4557230 Msa0144970:intron 45.0%
TCTGGTCAGTCTAAAGGCTA+TGG - chr1_4:4557217-4557236 Msa0144970:intron 45.0%
CAGAATCCTCAGCCTCAAAT+TGG + chr1_4:4557249-4557268 None:intergenic 45.0%
CAATGACAAGCAGGTGTTTG+TGG - chr1_4:4557306-4557325 Msa0144970:intron 45.0%
TGATGAGAGATGCTGATGGT+AGG - chr1_4:4557476-4557495 Msa0144970:intron 45.0%
AGATGCTGCTAAAGCTGTTG+AGG - chr1_4:4557537-4557556 Msa0144970:intron 45.0%
GATGACAAGGAGTGGTATGT+TGG - chr1_4:4557580-4557599 Msa0144970:intron 45.0%
CAGATTATGCGAGACCCAAA+TGG - chr1_4:4557886-4557905 Msa0144970:intron 45.0%
ATCCTCTGCTGACACCATTT+GGG + chr1_4:4557903-4557922 None:intergenic 45.0%
! ATGCGATGTTACTTGCAGCT+TGG - chr1_4:4558040-4558059 Msa0144970:intron 45.0%
TTGCAGCTTGGAGAGATGAA+TGG - chr1_4:4558052-4558071 Msa0144970:intron 45.0%
TGTGCAACAGCAACATAGAG+AGG + chr1_4:4558097-4558116 None:intergenic 45.0%
TTTCCCACCAAAATTGGCAC+CGG - chr1_4:4558530-4558549 Msa0144970:CDS 45.0%
AGTCTCACAGTATGCAAACC+CGG + chr1_4:4558627-4558646 None:intergenic 45.0%
GGTCTATGATATGTTTGCGG+AGG - chr1_4:4559076-4559095 Msa0144970:CDS 45.0%
GTTTGCGGAGGGTTATTTGT+AGG - chr1_4:4559088-4559107 Msa0144970:CDS 45.0%
GGAACAAAGTAGCTTGGCAT+AGG + chr1_4:4559677-4559696 None:intergenic 45.0%
! GCCAAGCTACTTTGTTCCAA+TGG - chr1_4:4559679-4559698 Msa0144970:intron 45.0%
CTTTGTTCCAATGGTTCAGC+AGG - chr1_4:4559688-4559707 Msa0144970:intron 45.0%
TAGCGATAAACACGTTGCCT+TGG + chr1_4:4559895-4559914 None:intergenic 45.0%
! TCCACCAATGTTTTGCACAG+GGG + chr1_4:4559947-4559966 None:intergenic 45.0%
! CTCCACCAATGTTTTGCACA+GGG + chr1_4:4559948-4559967 None:intergenic 45.0%
ATGATGTCCTATGACATGGG+AGG - chr1_4:4559970-4559989 Msa0144970:intron 45.0%
GCTGTAGCCAAAGCATGAAT+GGG + chr1_4:4560027-4560046 None:intergenic 45.0%
TGCTGTAGCCAAAGCATGAA+TGG + chr1_4:4560028-4560047 None:intergenic 45.0%
TTACAGTCCTCTGCTGTTCA+GGG + chr1_4:4560065-4560084 None:intergenic 45.0%
GTATGGTTAGATGCTTGGAG+AGG - chr1_4:4560192-4560211 Msa0144970:intron 45.0%
TGTTCCAGCTGATCTACTAG+CGG + chr1_4:4560226-4560245 None:intergenic 45.0%
GGAACATGATTCAGCAGCTA+AGG - chr1_4:4560240-4560259 Msa0144970:intron 45.0%
GATTCAGCAGCTAAGGTTAC+CGG - chr1_4:4560247-4560266 Msa0144970:intron 45.0%
!! ACTTTAGCCTTGAGAGCATC+TGG + chr1_4:4560322-4560341 None:intergenic 45.0%
TAAAGTTGCTGAAGCCATGG+AGG - chr1_4:4560336-4560355 Msa0144970:CDS 45.0%
! TGGGGGGGTATAGAAATGAT+GGG + chr1_4:4560468-4560487 None:intergenic 45.0%
AAAAAAAAAACGGGGGGTGG+GGG + chr1_4:4560485-4560504 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAAAAAC+GGG + chr1_4:4560494-4560513 None:intergenic 5.0%
!!! GTTTTTATTTATTTTTTATT+TGG - chr1_4:4560579-4560598 Msa0144970:five_prime_UTR 5.0%
CGGAACGGGAATAGTATCAG+CGG + chr1_4:4555620-4555639 None:intergenic 50.0%
ACTATTCCCGTTCCGATCAC+CGG - chr1_4:4555625-4555644 Msa0144970:three_prime_UTR 50.0%
!! CCGTTTGAAGGTGCTGGAAT+CGG + chr1_4:4555806-4555825 None:intergenic 50.0%
CCGATTCCAGCACCTTCAAA+CGG - chr1_4:4555803-4555822 Msa0144970:three_prime_UTR 50.0%
GTTACGACGTCGTTGTACGT+TGG - chr1_4:4555854-4555873 Msa0144970:CDS 50.0%
ACTCGTCGTTCGCTTGGTTA+TGG - chr1_4:4555971-4555990 Msa0144970:CDS 50.0%
TTATTCAGCGGCTAGGGCTT+TGG - chr1_4:4556134-4556153 Msa0144970:intron 50.0%
GATCCTAGTAGTCGCAAGAG+CGG - chr1_4:4556216-4556235 Msa0144970:CDS 50.0%
GAACGTGAGCAAGAGCTGAA+AGG - chr1_4:4557622-4557641 Msa0144970:intron 50.0%
GTGAGCAAGAGCTGAAAGGA+AGG - chr1_4:4557626-4557645 Msa0144970:intron 50.0%
GATCCTCTGCTGACACCATT+TGG + chr1_4:4557904-4557923 None:intergenic 50.0%
! AATGGTGTCAGCAGAGGATC+TGG - chr1_4:4557904-4557923 Msa0144970:intron 50.0%
ACAGCTCTTGATGCTTCCTC+TGG + chr1_4:4557949-4557968 None:intergenic 50.0%
! TGTTGCTGTTGCACAGCGAA+AGG - chr1_4:4558102-4558121 Msa0144970:intron 50.0%
TGTCGTTGTGTCCCTCTTGT+TGG - chr1_4:4558453-4558472 Msa0144970:intron 50.0%
TTCCCACCAAAATTGGCACC+GGG - chr1_4:4558531-4558550 Msa0144970:CDS 50.0%
CTTGGAGTGTGCTCCTTTCA+AGG + chr1_4:4558573-4558592 None:intergenic 50.0%
CACAGTATGCAAACCCGGTT+GGG + chr1_4:4558622-4558641 None:intergenic 50.0%
TCACAGTATGCAAACCCGGT+TGG + chr1_4:4558623-4558642 None:intergenic 50.0%
TTCGAACGCCTCACTTGCAA+GGG + chr1_4:4558656-4558675 None:intergenic 50.0%
!! TTGTGGAGGCATCATAGCTG+GGG + chr1_4:4559266-4559285 None:intergenic 50.0%
!! CTTGTGGAGGCATCATAGCT+GGG + chr1_4:4559267-4559286 None:intergenic 50.0%
!! ACTTGTGGAGGCATCATAGC+TGG + chr1_4:4559268-4559287 None:intergenic 50.0%
! TATCAGCAGCAGCTTGTTCC+TGG - chr1_4:4559632-4559651 Msa0144970:intron 50.0%
! ATCAGCAGCAGCTTGTTCCT+GGG - chr1_4:4559633-4559652 Msa0144970:intron 50.0%
!! ATCATTGGCACTTGCTGTGG+GGG + chr1_4:4559764-4559783 None:intergenic 50.0%
!! CATCATTGGCACTTGCTGTG+GGG + chr1_4:4559765-4559784 None:intergenic 50.0%
!! GCATCATTGGCACTTGCTGT+GGG + chr1_4:4559766-4559785 None:intergenic 50.0%
! TGCATCATTGGCACTTGCTG+TGG + chr1_4:4559767-4559786 None:intergenic 50.0%
TCTTGAATGTTGCTGCGACC+AGG + chr1_4:4559922-4559941 None:intergenic 50.0%
GATGCCCCTGTGCAAAACAT+TGG - chr1_4:4559940-4559959 Msa0144970:intron 50.0%
! CCTCCACCAATGTTTTGCAC+AGG + chr1_4:4559949-4559968 None:intergenic 50.0%
CCTGTGCAAAACATTGGTGG+AGG - chr1_4:4559946-4559965 Msa0144970:intron 50.0%
TGGCAAACCTCCCATGTCAT+AGG + chr1_4:4559980-4559999 None:intergenic 50.0%
GGTGGTACAACATCACGAAG+TGG + chr1_4:4560000-4560019 None:intergenic 50.0%
AAAGCATGAATGGGCATGGG+TGG + chr1_4:4560018-4560037 None:intergenic 50.0%
ACCCATGCCCATTCATGCTT+TGG - chr1_4:4560017-4560036 Msa0144970:intron 50.0%
GCCAAAGCATGAATGGGCAT+GGG + chr1_4:4560021-4560040 None:intergenic 50.0%
AGCCAAAGCATGAATGGGCA+TGG + chr1_4:4560022-4560041 None:intergenic 50.0%
TACAGTCCTCTGCTGTTCAG+GGG + chr1_4:4560064-4560083 None:intergenic 50.0%
CTTACAGTCCTCTGCTGTTC+AGG + chr1_4:4560066-4560085 None:intergenic 50.0%
GTATCCGCTAGTAGATCAGC+TGG - chr1_4:4560219-4560238 Msa0144970:intron 50.0%
TAAGGTTACCGGCATGCTTC+TGG - chr1_4:4560258-4560277 Msa0144970:intron 50.0%
TGAGTCACCAGATGCTCTCA+AGG - chr1_4:4560312-4560331 Msa0144970:CDS 50.0%
GGCTAAAGTTGCTGAAGCCA+TGG - chr1_4:4560333-4560352 Msa0144970:CDS 50.0%
TCAACAGCAAGGAAACAGCC+CGG - chr1_4:4560375-4560394 Msa0144970:CDS 50.0%
AGAGTCGTTGAGAGAGAGTG+AGG + chr1_4:4560413-4560432 None:intergenic 50.0%
! GGGGGTATAGAAATGATGGG+TGG + chr1_4:4560465-4560484 None:intergenic 50.0%
! GTGGGGGGGTATAGAAATGA+TGG + chr1_4:4560469-4560488 None:intergenic 50.0%
AAAAAAAAACGGGGGGTGGG+GGG + chr1_4:4560484-4560503 None:intergenic 50.0%
!! GGTTTTTGGGAGGGCAGAGA+AGG + chr1_4:4555579-4555598 None:intergenic 55.0%
TGGATAAACCCGCCGGTGAT+CGG + chr1_4:4555640-4555659 None:intergenic 55.0%
! GAAACGACGCTGCCGTTTGA+AGG + chr1_4:4555818-4555837 None:intergenic 55.0%
TTGGCTACTCGTCGTTCGCT+TGG - chr1_4:4555965-4555984 Msa0144970:CDS 55.0%
! GACCCAAATGGTGTCAGCAG+AGG - chr1_4:4557898-4557917 Msa0144970:intron 55.0%
CGTTGTGTCCCTCTTGTTGG+TGG - chr1_4:4558456-4558475 Msa0144970:intron 55.0%
! TGTGTCCCTCTTGTTGGTGG+AGG - chr1_4:4558459-4558478 Msa0144970:intron 55.0%
AGGTGCCTCCACCAACAAGA+GGG + chr1_4:4558467-4558486 None:intergenic 55.0%
! AAGGTGCCTCCACCAACAAG+AGG + chr1_4:4558468-4558487 None:intergenic 55.0%
TCCCACCAAAATTGGCACCG+GGG - chr1_4:4558532-4558551 Msa0144970:CDS 55.0%
!! TCCCCGGTGCCAATTTTGGT+GGG + chr1_4:4558536-4558555 None:intergenic 55.0%
!! ACTCTCCCCGGTGCCAATTT+TGG + chr1_4:4558540-4558559 None:intergenic 55.0%
GGTCCAAATTCGACTCTCCC+CGG + chr1_4:4558552-4558571 None:intergenic 55.0%
CTTCGAACGCCTCACTTGCA+AGG + chr1_4:4558657-4558676 None:intergenic 55.0%
! TGAGGCGTTCGAAGTATGCG+AGG - chr1_4:4558663-4558682 Msa0144970:CDS 55.0%
AGGAGGGTAGAGTGGCATTC+GGG + chr1_4:4559200-4559219 None:intergenic 55.0%
CAGGAGGGTAGAGTGGCATT+CGG + chr1_4:4559201-4559220 None:intergenic 55.0%
!! CAAGACCAGGAGTACCAGGA+GGG + chr1_4:4559216-4559235 None:intergenic 55.0%
!! TGTCCAAGACCAGGAGTACC+AGG + chr1_4:4559220-4559239 None:intergenic 55.0%
!! TGTGGAGGCATCATAGCTGG+GGG + chr1_4:4559265-4559284 None:intergenic 55.0%
CTTGTTCCTGGGATGAGACC+TGG - chr1_4:4559644-4559663 Msa0144970:intron 55.0%
TGTTGGCCCTGCTGAACCAT+TGG + chr1_4:4559698-4559717 None:intergenic 55.0%
ATGGTTCAGCAGGGCCAACA+AGG - chr1_4:4559698-4559717 Msa0144970:intron 55.0%
GTTGTTGACCAGGACCTCCT+CGG + chr1_4:4559742-4559761 None:intergenic 55.0%
AGTGCCAATGATGCAGCAGC+AGG - chr1_4:4559772-4559791 Msa0144970:intron 55.0%
CAGACCTGCTGCTGCATCAT+TGG + chr1_4:4559779-4559798 None:intergenic 55.0%
CGTGTTTATCGCTACCCTCC+TGG - chr1_4:4559901-4559920 Msa0144970:intron 55.0%
GAATGTTGCTGCGACCAGGA+GGG + chr1_4:4559918-4559937 None:intergenic 55.0%
TGAATGTTGCTGCGACCAGG+AGG + chr1_4:4559919-4559938 None:intergenic 55.0%
GCCCCTGTGCAAAACATTGG+TGG - chr1_4:4559943-4559962 Msa0144970:intron 55.0%
ACAGTCCTCTGCTGTTCAGG+GGG + chr1_4:4560063-4560082 None:intergenic 55.0%
! TACCGGCATGCTTCTGGAGA+TGG - chr1_4:4560264-4560283 Msa0144970:CDS 55.0%
! GTCCATCTCCAGAAGCATGC+CGG + chr1_4:4560269-4560288 None:intergenic 55.0%
! AGTGAGGCTAGTTGATCCGC+CGG + chr1_4:4560397-4560416 None:intergenic 55.0%
AAAAAAAACGGGGGGTGGGG+GGG + chr1_4:4560483-4560502 None:intergenic 55.0%
AAGGCTGCACTGCACCGCAA+TGG + chr1_4:4555560-4555579 None:intergenic 60.0%
ATTCCCGTTCCGATCACCGG+CGG - chr1_4:4555628-4555647 Msa0144970:three_prime_UTR 60.0%
AAACCCGCCGGTGATCGGAA+CGG + chr1_4:4555635-4555654 None:intergenic 60.0%
!! GAAGGTGCTGGAATCGGTGC+CGG + chr1_4:4555800-4555819 None:intergenic 60.0%
! ACGCTGCCGTTTGAAGGTGC+TGG + chr1_4:4555812-4555831 None:intergenic 60.0%
! GTGCCGCTCTTGCGACTACT+AGG + chr1_4:4556222-4556241 None:intergenic 60.0%
!! CTCCCCGGTGCCAATTTTGG+TGG + chr1_4:4558537-4558556 None:intergenic 60.0%
GCACCGGGGAGAGTCGAATT+TGG - chr1_4:4558546-4558565 Msa0144970:CDS 60.0%
!! GAGGTGTTGGCTTGGGAGCT+TGG + chr1_4:4558591-4558610 None:intergenic 60.0%
!! TCGCCTGGAGGTGTTGGCTT+GGG + chr1_4:4558598-4558617 None:intergenic 60.0%
!! TTCGCCTGGAGGTGTTGGCT+TGG + chr1_4:4558599-4558618 None:intergenic 60.0%
! TTGGGTTCGCCTGGAGGTGT+TGG + chr1_4:4558604-4558623 None:intergenic 60.0%
GGAGGGTAGAGTGGCATTCG+GGG + chr1_4:4559199-4559218 None:intergenic 60.0%
CGAATGCCACTCTACCCTCC+TGG - chr1_4:4559199-4559218 Msa0144970:intron 60.0%
! GGAGTACCAGGAGGGTAGAG+TGG + chr1_4:4559208-4559227 None:intergenic 60.0%
CTCTACCCTCCTGGTACTCC+TGG - chr1_4:4559208-4559227 Msa0144970:intron 60.0%
!! CCAAGACCAGGAGTACCAGG+AGG + chr1_4:4559217-4559236 None:intergenic 60.0%
CCTCCTGGTACTCCTGGTCT+TGG - chr1_4:4559214-4559233 Msa0144970:intron 60.0%
GCATCATAGCTGGGGGTCCT+TGG + chr1_4:4559258-4559277 None:intergenic 60.0%
GTTCCTGGGATGAGACCTGG+TGG - chr1_4:4559647-4559666 Msa0144970:intron 60.0%
CTTGGCATAGGACCACCACC+AGG + chr1_4:4559665-4559684 None:intergenic 60.0%
TGCTGTGGGGGTTGTTGACC+AGG + chr1_4:4559752-4559771 None:intergenic 60.0%
ATGCTCCCCCTGAACAGCAG+AGG - chr1_4:4560055-4560074 Msa0144970:CDS 60.0%
ACAGCAAGGAAACAGCCCGG+CGG - chr1_4:4560378-4560397 Msa0144970:CDS 60.0%
! GTGAGGCTAGTTGATCCGCC+GGG + chr1_4:4560396-4560415 None:intergenic 60.0%
TTCCCGTTCCGATCACCGGC+GGG - chr1_4:4555629-4555648 Msa0144970:three_prime_UTR 65.0%
AACCCGCCGGTGATCGGAAC+GGG + chr1_4:4555634-4555653 None:intergenic 65.0%
GCTCCCAAGCCAACACCTCC+AGG - chr1_4:4558592-4558611 Msa0144970:CDS 65.0%
CACCTCCAGGCGAACCCAAC+CGG - chr1_4:4558605-4558624 Msa0144970:CDS 65.0%
ACCTCCAGGCGAACCCAACC+GGG - chr1_4:4558606-4558625 Msa0144970:CDS 65.0%
CAAACCCGGTTGGGTTCGCC+TGG + chr1_4:4558613-4558632 None:intergenic 65.0%
GGCATTCGGGGCGCAACAGA+AGG + chr1_4:4559187-4559206 None:intergenic 65.0%
CCACCACCAGGTCTCATCCC+AGG + chr1_4:4559653-4559672 None:intergenic 65.0%
CCTGGGATGAGACCTGGTGG+TGG - chr1_4:4559650-4559669 Msa0144970:intron 65.0%
!! CACCAGGGCGCTGACCTTGT+TGG + chr1_4:4559715-4559734 None:intergenic 65.0%
CAACAAGGTCAGCGCCCTGG+TGG - chr1_4:4559713-4559732 Msa0144970:intron 65.0%
ACCCGGTTGGGTTCGCCTGG+AGG + chr1_4:4558610-4558629 None:intergenic 70.0%
GGCCAACAAGGTCAGCGCCC+TGG - chr1_4:4559710-4559729 Msa0144970:intron 70.0%
GACCTCCTCGGCGTCCACCA+GGG + chr1_4:4559730-4559749 None:intergenic 70.0%
GGACCTCCTCGGCGTCCACC+AGG + chr1_4:4559731-4559750 None:intergenic 75.0%
GGTGGACGCCGAGGAGGTCC+TGG - chr1_4:4559731-4559750 Msa0144970:intron 75.0%
!! CAGCGCCCTGGTGGACGCCG+AGG - chr1_4:4559722-4559741 Msa0144970:intron 80.0%
!! CGCCCTGGTGGACGCCGAGG+AGG - chr1_4:4559725-4559744 Msa0144970:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 4555503 4560778 4555503 ID=Msa0144970;Name=Msa0144970
chr1_4 mRNA 4555503 4560778 4555503 ID=Msa0144970-mRNA-1;Parent=Msa0144970;Name=Msa0144970-mRNA-1;_AED=0.06;_eAED=0.06;_QI=264|1|1|1|1|1|9|343|647
chr1_4 exon 4555503 4556079 4555503 ID=Msa0144970-mRNA-1:exon:1905;Parent=Msa0144970-mRNA-1
chr1_4 exon 4556201 4556395 4556201 ID=Msa0144970-mRNA-1:exon:1904;Parent=Msa0144970-mRNA-1
chr1_4 exon 4556488 4556661 4556488 ID=Msa0144970-mRNA-1:exon:1903;Parent=Msa0144970-mRNA-1
chr1_4 exon 4556996 4557133 4556996 ID=Msa0144970-mRNA-1:exon:1902;Parent=Msa0144970-mRNA-1
chr1_4 exon 4558134 4558223 4558134 ID=Msa0144970-mRNA-1:exon:1901;Parent=Msa0144970-mRNA-1
chr1_4 exon 4558315 4558392 4558315 ID=Msa0144970-mRNA-1:exon:1900;Parent=Msa0144970-mRNA-1
chr1_4 exon 4558495 4559154 4558495 ID=Msa0144970-mRNA-1:exon:1899;Parent=Msa0144970-mRNA-1
chr1_4 exon 4560021 4560139 4560021 ID=Msa0144970-mRNA-1:exon:1898;Parent=Msa0144970-mRNA-1
chr1_4 exon 4560259 4560778 4560259 ID=Msa0144970-mRNA-1:exon:1897;Parent=Msa0144970-mRNA-1
chr1_4 five_prime_UTR 4560515 4560778 4560515 ID=Msa0144970-mRNA-1:five_prime_utr;Parent=Msa0144970-mRNA-1
chr1_4 CDS 4560259 4560514 4560259 ID=Msa0144970-mRNA-1:cds;Parent=Msa0144970-mRNA-1
chr1_4 CDS 4560021 4560139 4560021 ID=Msa0144970-mRNA-1:cds;Parent=Msa0144970-mRNA-1
chr1_4 CDS 4558495 4559154 4558495 ID=Msa0144970-mRNA-1:cds;Parent=Msa0144970-mRNA-1
chr1_4 CDS 4558315 4558392 4558315 ID=Msa0144970-mRNA-1:cds;Parent=Msa0144970-mRNA-1
chr1_4 CDS 4558134 4558223 4558134 ID=Msa0144970-mRNA-1:cds;Parent=Msa0144970-mRNA-1
chr1_4 CDS 4556996 4557133 4556996 ID=Msa0144970-mRNA-1:cds;Parent=Msa0144970-mRNA-1
chr1_4 CDS 4556488 4556661 4556488 ID=Msa0144970-mRNA-1:cds;Parent=Msa0144970-mRNA-1
chr1_4 CDS 4556201 4556395 4556201 ID=Msa0144970-mRNA-1:cds;Parent=Msa0144970-mRNA-1
chr1_4 CDS 4555846 4556079 4555846 ID=Msa0144970-mRNA-1:cds;Parent=Msa0144970-mRNA-1
chr1_4 three_prime_UTR 4555503 4555845 4555503 ID=Msa0144970-mRNA-1:three_prime_utr;Parent=Msa0144970-mRNA-1
Gene Sequence

>Msa0144970

ATGGCGCAGATTCAGGTTCAGCATCAAATTCCGGCACCGATTCCAGCACCTTCAAACGGCAGCGTCGTTTCGACACCGAATCAGTTCGTTACGACGTCGTTGTACGTTGGTGATCTTGAGGTGAATGTGAACGATTCTCAGCTTTACGATCACTTTAATCAAGTTGGACAAGTGGTTTCGGTTAGGGTTTGTAGGGATTTGGCTACTCGTCGTTCGCTTGGTTATGGTTATGTTAATTTCACTAACCCTCAGGATGCGGCTAGGGCTTTGGATGTTCTGAATTTTACTCCTCTGAACAACAAATCTATTAGGGTTATGTATTCTCATCGTGATCCTAGTAGTCGCAAGAGCGGCACTGCTAATATTTTTATCAAGAATTTGGATAAGACGATTGATCACAAAGCTTTACATGACACTTTTTCTTCTTTCGGACAAATTATGTCTTGCAAAATAGCAACTGATGGTTCTGGTCAGTCTAAAGGCTATGGTTTTGTCCAATTTGAGGCTGAGGATTCTGCTCAGAATGCAATTGATAAGTTAAATGGAATGTTGATCAATGACAAGCAGGTGTTTGTGGGTCATTTCCTACGTAAGCAAGATAGAGATAACGTTCTCAGTAAGACAAAATTTAACAATGTCTATGTGAAAAACCTATCAGAGTCATTTACGGAAGATGACTTGAAAAATGAATTTGGAGCTTATGGGACCATTACTAGTGCTGTTTTGATGAGAGATGCTGATGGTAGGTCGAAATGTTTTGGATTTGTCAATTTCGAAAATGCAGAAGATGCTGCTAAAGCTGTTGAGGCATTGAATGGTAAAAAAGTTGATGACAAGGAGTGGTATGTTGGTAAAGCTCAGAAAAAATCTGAACGTGAGCAAGAGCTGAAAGGAAGGTTTGAGCAGACTGTAAAGGAGTCTGTAGTAGACAAATTTCAAGGTCTGAACTTGTATCTCAAAAACTTGGATGATTCCATTACTGATGAAAAACTCAAGGAAATGTTCTCTGAGTTTGGCACAATTACTTCGTACAAGATTATGCGAGACCCAAATGGTGTCAGCAGAGGATCTGGCTTTGTTGCATTTTCAACTCCAGAGGAAGCATCAAGAGCTCTTGGAGAGATGAATGGCAAAATGATCGTTAGCAAACCTCTCTATGTTGCTGTTGCACAGCGAAAGGAAGATAGAAGAGCAAGATTGCAGGCACAATTTTCACAAATGAGGCCTGTTGCAATTACACCTTCTGTTGCGCCCCGAATGCCACTCTACCCTCCTGGTACTCCTGGTCTTGGACAACAATTTATGTATGGCCAAGGACCCCCAGCTATGATGCCTCCACAAGCTGGATTTGGATATCAGCAGCAGCTTGTTCCTGGGATGAGACCTGGTGGTGGTCCTATGCCAAGCTACTTTGTTCCAATGGTTCAGCAGGGCCAACAAGGTCAGCGCCCTGGTGGACGCCGAGGAGGTCCTGGTCAACAACCCCCACAGCAAGTGCCAATGATGCAGCAGCAGATGCTTCCAAGGCAACGTGTTTATCGCTACCCTCCTGGTCGCAGCAACATTCAAGATGCCCCTGTGCAAAACATTGGTGGAGGAATGATGTCCTATGACATGGGAGGTTTGCCACTTCGTGATGTTGTACCACCCATGCCCATTCATGCTTTGGCTACAGCACTTGCGAATGCTCCCCCTGAACAGCAGAGGACTATGCTTGGAGAGGCTTTGTATCCGCTAGTAGATCAGCTGGAACATGATTCAGCAGCTAAGGTTACCGGCATGCTTCTGGAGATGGACCAGCCTGAAGTATTGCATTTGATTGAGTCACCAGATGCTCTCAAGGCTAAAGTTGCTGAAGCCATGGAGGTTTTGAGAAATGTTACTCAACAGCAAGGAAACAGCCCGGCGGATCAACTAGCCTCACTCTCTCTCAACGACTCTTAG
Protein sequence

>Msa0144970

MAQIQVQHQIPAPIPAPSNGSVVSTPNQFVTTSLYVGDLEVNVNDSQLYDHFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALDVLNFTPLNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAVAQRKEDRRARLQAQFSQMRPVAITPSVAPRMPLYPPGTPGLGQQFMYGQGPPAMMPPQAGFGYQQQLVPGMRPGGGPMPSYFVPMVQQGQQGQRPGGRRGGPGQQPPQQVPMMQQQMLPRQRVYRYPPGRSNIQDAPVQNIGGGMMSYDMGGLPLRDVVPPMPIHALATALANAPPEQQRTMLGEALYPLVDQLEHDSAAKVTGMLLEMDQPEVLHLIESPDALKAKVAEAMEVLRNVTQQQGNSPADQLASLSLNDS*