AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0096940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0096940 MtrunA17_Chr1g0153181 98.454 647 10 0 1 647 1 647 0.0 1313
Msa0096940 MtrunA17_Chr4g0044541 75.000 644 153 5 1 638 1 642 0.0 944
Msa0096940 MtrunA17_Chr3g0134141 73.718 624 142 6 25 647 17 619 0.0 907
Msa0096940 MtrunA17_Chr3g0134141 35.811 296 172 4 112 406 16 294 5.74e-48 178
Msa0096940 MtrunA17_Chr1g0201151 56.744 645 253 14 14 645 14 645 0.0 691
Msa0096940 MtrunA17_Chr6g0466501 51.177 637 250 14 14 629 12 608 0.0 577
Msa0096940 MtrunA17_Chr6g0465751 51.033 629 258 13 21 629 14 612 0.0 577
Msa0096940 MtrunA17_Chr6g0466451 53.008 532 219 13 106 628 1 510 2.89e-172 501
Msa0096940 MtrunA17_Chr6g0466451 36.934 287 162 5 33 302 16 300 4.34e-49 179
Msa0096940 MtrunA17_Chr6g0466451 32.857 210 118 5 32 222 105 310 7.67e-23 102
Msa0096940 MtrunA17_Chr6g0465631 52.820 532 220 13 106 628 1 510 2.13e-171 498
Msa0096940 MtrunA17_Chr6g0465631 36.934 287 162 5 33 302 16 300 4.70e-49 179
Msa0096940 MtrunA17_Chr6g0465631 32.857 210 118 5 32 222 105 310 8.03e-23 102
Msa0096940 MtrunA17_Chr6g0465691 50.446 561 222 13 90 629 1 526 4.63e-169 493
Msa0096940 MtrunA17_Chr6g0465691 36.299 281 165 3 33 300 32 311 3.55e-49 180
Msa0096940 MtrunA17_Chr6g0465691 31.551 187 110 2 32 201 118 303 1.64e-22 101
Msa0096940 MtrunA17_Chr0c09g0493511 49.126 572 239 14 90 641 1 540 2.91e-163 479
Msa0096940 MtrunA17_Chr0c09g0493511 37.367 281 162 3 33 300 32 311 1.41e-51 186
Msa0096940 MtrunA17_Chr0c09g0493511 32.620 187 108 2 32 201 118 303 1.63e-24 108
Msa0096940 MtrunA17_Chr7g0265341 44.127 630 302 11 23 626 61 666 3.18e-160 476
Msa0096940 MtrunA17_Chr1g0179701 42.630 441 225 4 33 469 63 479 2.47e-113 351
Msa0096940 MtrunA17_Chr1g0179701 36.585 287 162 4 120 404 62 330 4.24e-46 172
Msa0096940 MtrunA17_Chr1g0179701 29.570 186 118 2 32 205 241 425 4.14e-21 97.8
Msa0096940 MtrunA17_Chr1g0153871 30.418 263 173 6 122 380 99 355 9.99e-30 122
Msa0096940 MtrunA17_Chr1g0153871 27.376 263 167 7 33 276 98 355 1.66e-23 103
Msa0096940 MtrunA17_Chr1g0153871 32.000 175 97 4 33 190 191 360 4.54e-18 87.4
Msa0096940 MtrunA17_Chr3g0110211 37.791 172 104 3 32 201 25 195 1.25e-29 121
Msa0096940 MtrunA17_Chr3g0110211 30.500 200 126 6 113 309 18 207 6.57e-19 89.4
Msa0096940 MtrunA17_Chr3g0110211 31.746 189 108 5 214 399 28 198 4.64e-18 86.7
Msa0096940 MtrunA17_Chr3g0133651 27.152 302 205 8 107 399 76 371 1.68e-26 112
Msa0096940 MtrunA17_Chr3g0133651 26.894 264 168 7 33 276 94 352 5.01e-21 96.3
Msa0096940 MtrunA17_Chr2g0288251 28.517 263 161 9 33 273 61 318 8.75e-25 107
Msa0096940 MtrunA17_Chr2g0288251 25.188 266 186 9 122 380 62 321 4.77e-20 92.8
Msa0096940 MtrunA17_Chr2g0328791 24.534 322 197 8 33 314 16 331 6.52e-23 102
Msa0096940 MtrunA17_Chr2g0328791 24.870 193 128 5 206 394 10 189 2.76e-12 69.3
Msa0096940 MtrunA17_Chr3g0139111 27.143 280 163 7 33 279 61 332 9.53e-23 101
Msa0096940 MtrunA17_Chr3g0139111 25.084 299 197 7 112 392 52 341 2.02e-18 88.6
Msa0096940 MtrunA17_Chr4g0074711 27.305 282 169 10 14 273 64 331 1.26e-22 100
Msa0096940 MtrunA17_Chr4g0074711 25.455 275 193 8 112 380 66 334 1.71e-20 94.4
Msa0096940 MtrunA17_Chr4g0070231 26.667 300 190 8 112 392 38 326 2.79e-22 99.8
Msa0096940 MtrunA17_Chr4g0070231 25.818 275 162 7 33 274 47 312 8.64e-20 92.0
Msa0096940 MtrunA17_Chr6g0465621 64.516 62 22 0 29 90 22 83 1.05e-21 89.7
Msa0096940 MtrunA17_Chr6g0466441 64.516 62 22 0 29 90 22 83 1.05e-21 89.7
Msa0096940 MtrunA17_Chr0c09g0493521 51.765 85 34 1 1 85 1 78 4.06e-20 85.1
Msa0096940 MtrunA17_Chr6g0466541 36.250 160 66 3 245 404 2 125 6.08e-20 86.3
Msa0096940 MtrunA17_Chr6g0466541 36.111 144 69 2 154 297 2 122 8.06e-18 80.1
Msa0096940 MtrunA17_Chr6g0465741 64.179 67 23 1 571 636 40 106 6.15e-20 85.9
Msa0096940 MtrunA17_Chr0c09g0493581 55.556 72 27 1 14 85 12 78 2.89e-19 82.4
Msa0096940 MtrunA17_Chr6g0465701 51.899 79 33 1 14 92 12 85 3.72e-19 82.8
Msa0096940 MtrunA17_Chr4g0045221 26.282 312 180 10 122 399 118 413 3.94e-19 90.9
Msa0096940 MtrunA17_Chr4g0045221 25.795 283 166 8 33 276 117 394 3.36e-18 87.8
Msa0096940 MtrunA17_Chr4g0045221 30.256 195 122 6 205 394 110 295 2.03e-14 76.3
Msa0096940 MtrunA17_Chr8g0344491 26.374 273 163 7 33 274 63 328 8.53e-19 89.4
Msa0096940 MtrunA17_Chr8g0344491 26.335 281 173 9 111 372 57 322 7.55e-17 83.6
Msa0096940 MtrunA17_Chr8g0344491 25.824 182 115 4 212 392 63 225 3.91e-12 68.9
Msa0096940 MtrunA17_Chr7g0276201 27.407 405 229 18 109 500 93 445 1.69e-16 82.8
Msa0096940 MtrunA17_Chr7g0276201 22.677 269 189 5 32 292 104 361 8.80e-15 77.4
Msa0096940 MtrunA17_Chr8g0372111 24.219 256 172 8 34 278 420 664 2.37e-15 80.1
Msa0096940 MtrunA17_Chr8g0335981 24.016 254 170 7 34 276 217 458 3.07e-15 79.7
Msa0096940 MtrunA17_Chr8g0335981 22.112 303 186 10 115 406 210 473 8.53e-11 65.5
Msa0096940 MtrunA17_Chr3g0087481 30.500 200 128 6 184 380 34 225 5.84e-15 75.1
Msa0096940 MtrunA17_Chr3g0087481 25.146 171 116 3 34 192 62 232 1.69e-11 64.7
Msa0096940 MtrunA17_Chr4g0026301 24.590 244 168 6 32 269 110 343 6.50e-15 77.8
Msa0096940 MtrunA17_Chr1g0177101 30.653 199 126 5 196 390 93 283 1.02e-14 75.5
Msa0096940 MtrunA17_Chr1g0177101 27.778 162 105 2 34 183 110 271 8.03e-14 72.8
Msa0096940 MtrunA17_Chr6g0466551 61.538 65 24 1 566 629 34 98 1.54e-14 70.9
Msa0096940 MtrunA17_Chr7g0260761 23.951 405 262 9 14 382 264 658 2.29e-14 76.6
Msa0096940 MtrunA17_Chr7g0267571 30.964 197 129 5 198 390 95 288 6.63e-14 73.2
Msa0096940 MtrunA17_Chr7g0267571 28.415 183 102 4 28 185 100 278 2.20e-13 71.6
Msa0096940 MtrunA17_Chr1g0181111 29.016 193 108 4 25 192 81 269 7.47e-14 72.4
Msa0096940 MtrunA17_Chr3g0116631 29.630 189 117 4 213 396 111 288 1.20e-13 72.0
Msa0096940 MtrunA17_Chr3g0116631 27.059 170 112 3 34 192 111 279 2.73e-12 68.2
Msa0096940 MtrunA17_Chr3g0116631 26.111 180 126 4 120 292 109 288 7.21e-11 63.5
Msa0096940 MtrunA17_Chr7g0217261 23.828 256 179 7 19 269 338 582 4.99e-13 72.4
Msa0096940 MtrunA17_Chr4g0058151 27.545 167 112 3 34 192 124 289 6.90e-13 70.1
Msa0096940 MtrunA17_Chr4g0058151 28.342 187 119 4 213 396 124 298 1.31e-11 66.2
Msa0096940 MtrunA17_Chr4g0068631 25.773 194 124 5 210 398 87 265 8.86e-13 71.6
Msa0096940 MtrunA17_Chr4g0068631 26.797 153 109 1 34 183 90 242 3.43e-11 66.6
Msa0096940 MtrunA17_Chr7g0268551 27.174 276 162 8 207 463 7 262 9.83e-13 70.9
Msa0096940 MtrunA17_Chr7g0266451 25.306 245 162 8 32 269 101 331 1.39e-12 70.5
Msa0096940 MtrunA17_Chr3g0101061 30.000 180 109 6 213 383 42 213 2.61e-12 69.7
Msa0096940 MtrunA17_Chr3g0101061 27.011 174 109 5 122 279 42 213 5.34e-11 65.5
Msa0096940 MtrunA17_Chr1g0211191 26.708 161 100 2 33 176 71 230 6.86e-12 68.2
Msa0096940 MtrunA17_Chr3g0121631 41.772 79 45 1 31 109 35 112 1.11e-11 63.2
Msa0096940 MtrunA17_Chr7g0266751 38.272 81 49 1 115 194 27 107 2.28e-11 62.0
Msa0096940 MtrunA17_Chr7g0259641 28.182 220 142 7 121 329 586 800 4.13e-11 66.2
Msa0096940 MtrunA17_Chr7g0259641 25.946 185 113 5 26 192 579 757 5.72e-11 65.9
Msa0096940 MtrunA17_Chr4g0031091 35.802 81 51 1 115 194 28 108 4.66e-11 60.5
Msa0096940 MtrunA17_Chr5g0447761 27.174 184 108 6 116 279 2 179 5.83e-11 65.5
Msa0096940 MtrunA17_Chr5g0411091 28.108 185 120 4 212 393 97 271 6.59e-11 64.3
Msa0096940 MtrunA17_Chr2g0290191 23.864 176 115 4 34 190 6 181 7.10e-11 65.1
Msa0096940 MtrunA17_Chr1g0190351 25.079 315 183 10 116 390 310 611 8.63e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0096940 AT4G34110.1 67.945 652 179 6 1 645 1 629 0.0 855
Msa0096940 AT1G49760.1 67.512 631 185 7 31 647 44 668 0.0 818
Msa0096940 AT1G49760.2 67.512 631 185 7 31 647 44 668 0.0 818
Msa0096940 AT2G23350.1 64.762 630 192 10 32 646 46 660 0.0 793
Msa0096940 AT1G22760.1 54.160 637 264 13 2 625 23 644 0.0 612
Msa0096940 AT1G71770.1 53.175 630 270 12 31 643 58 679 0.0 598
Msa0096940 AT1G71770.2 53.175 630 270 12 31 643 58 679 0.0 598
Msa0096940 AT2G36660.1 39.448 616 300 13 30 626 22 583 1.62e-130 397
Msa0096940 AT1G34140.1 46.310 393 180 7 90 473 1 371 5.37e-111 340
Msa0096940 AT1G34140.1 35.336 283 166 4 33 300 32 312 1.16e-45 167
Msa0096940 AT1G34140.1 29.703 202 119 4 30 212 117 314 3.25e-22 100
Msa0096940 AT3G16380.1 42.995 414 222 7 33 437 22 430 1.22e-100 318
Msa0096940 AT3G16380.1 33.333 186 108 2 31 201 201 385 5.90e-23 103
Msa0096940 AT2G18510.1 36.047 172 107 3 32 201 25 195 1.14e-27 115
Msa0096940 AT2G18510.1 30.000 190 112 5 213 399 27 198 3.65e-16 81.3
Msa0096940 AT2G18510.1 26.230 183 127 5 113 292 18 195 9.20e-15 77.0
Msa0096940 AT1G47490.1 29.021 286 190 8 122 399 103 383 5.32e-26 111
Msa0096940 AT1G47490.1 26.493 268 168 8 33 276 102 364 2.26e-19 91.7
Msa0096940 AT1G47490.1 29.944 177 100 4 33 190 198 369 1.80e-15 79.7
Msa0096940 AT1G47500.1 28.866 291 184 10 122 399 105 385 1.33e-23 104
Msa0096940 AT1G47500.1 27.239 268 166 9 33 276 104 366 6.42e-19 90.5
Msa0096940 AT1G47500.1 30.508 177 99 4 33 190 200 371 1.12e-15 80.5
Msa0096940 AT1G11650.2 28.788 264 163 10 33 276 63 321 3.46e-23 102
Msa0096940 AT1G11650.2 24.221 289 208 7 121 404 63 345 1.73e-19 91.7
Msa0096940 AT5G54900.1 26.792 265 168 9 33 276 61 320 5.74e-23 102
Msa0096940 AT5G54900.1 24.815 270 191 9 117 380 57 320 2.32e-19 91.3
Msa0096940 AT5G54900.1 28.409 176 103 4 33 190 155 325 1.89e-13 73.2
Msa0096940 AT4G27000.1 26.236 263 170 8 33 276 81 338 1.26e-22 101
Msa0096940 AT4G27000.1 22.968 283 208 7 121 399 81 357 4.13e-18 87.8
Msa0096940 AT4G27000.1 27.411 197 124 6 203 394 72 254 1.34e-12 70.5
Msa0096940 AT5G41690.1 22.173 451 252 11 33 391 69 512 3.05e-21 98.6
Msa0096940 AT5G41690.3 22.173 451 252 11 33 391 69 512 3.05e-21 98.6
Msa0096940 AT5G41690.2 22.173 451 252 11 33 391 69 512 3.05e-21 98.6
Msa0096940 AT1G11650.1 28.862 246 150 10 33 258 63 303 3.67e-21 95.1
Msa0096940 AT1G11650.1 25.403 248 174 7 121 363 63 304 1.37e-17 84.3
Msa0096940 AT5G19350.2 24.453 274 172 7 33 276 25 293 1.97e-20 94.7
Msa0096940 AT5G19350.2 24.088 274 189 5 121 380 25 293 2.40e-18 88.6
Msa0096940 AT5G19350.2 26.984 189 104 4 33 192 117 300 1.53e-13 73.6
Msa0096940 AT1G45100.1 23.256 387 256 10 30 381 62 442 2.16e-20 95.5
Msa0096940 AT1G45100.1 25.597 293 171 6 25 274 151 439 1.52e-16 83.6
Msa0096940 AT5G19350.1 24.101 278 172 7 33 276 25 297 2.38e-20 94.7
Msa0096940 AT5G19350.1 24.101 278 188 6 121 380 25 297 6.68e-19 90.1
Msa0096940 AT5G19350.1 26.425 193 104 4 33 192 117 304 4.29e-13 72.0
Msa0096940 AT5G19350.1 24.017 229 142 7 209 425 22 230 8.87e-12 68.2
Msa0096940 AT1G49600.1 27.206 272 180 9 122 380 121 387 8.07e-20 93.2
Msa0096940 AT1G49600.1 26.374 273 167 7 33 276 120 387 1.25e-18 89.4
Msa0096940 AT1G49600.1 30.189 212 113 6 33 216 214 418 1.04e-14 77.4
Msa0096940 AT1G49600.3 27.206 272 180 9 122 380 121 387 9.66e-20 92.8
Msa0096940 AT1G49600.3 26.374 273 167 7 33 276 120 387 9.08e-19 90.1
Msa0096940 AT1G49600.2 27.206 272 180 9 122 380 121 387 9.66e-20 92.8
Msa0096940 AT1G49600.2 26.374 273 167 7 33 276 120 387 9.08e-19 90.1
Msa0096940 AT1G54080.1 28.369 282 166 9 111 372 58 323 1.46e-19 92.0
Msa0096940 AT1G54080.1 28.495 186 113 3 208 392 60 226 1.66e-15 79.7
Msa0096940 AT3G14100.1 25.830 271 163 6 33 272 60 323 3.20e-19 91.3
Msa0096940 AT3G14100.1 27.660 282 168 10 111 372 54 319 6.71e-18 87.0
Msa0096940 AT3G14100.1 29.121 182 109 3 212 392 60 222 1.95e-15 79.3
Msa0096940 AT3G19130.1 25.714 280 165 8 33 276 109 381 5.07e-19 90.5
Msa0096940 AT3G19130.1 27.240 279 176 9 122 380 110 381 9.71e-19 89.7
Msa0096940 AT1G17370.2 26.619 278 173 7 111 372 49 311 9.95e-19 89.7
Msa0096940 AT1G17370.2 25.556 270 162 7 33 272 55 315 2.19e-17 85.5
Msa0096940 AT1G17370.2 27.473 182 112 3 212 392 55 217 8.16e-13 71.2
Msa0096940 AT1G17370.1 27.758 281 169 10 111 372 49 314 1.30e-18 89.4
Msa0096940 AT1G17370.1 25.275 273 162 7 33 272 55 318 5.56e-17 84.3
Msa0096940 AT1G17370.1 27.473 182 112 3 212 392 55 217 8.88e-13 71.2
Msa0096940 AT1G54080.2 27.622 286 167 9 111 372 58 327 3.22e-18 88.2
Msa0096940 AT1G54080.2 28.947 190 111 4 208 392 60 230 2.41e-15 79.3
Msa0096940 AT2G15500.1 33.333 171 47 4 267 437 29 132 4.17e-17 78.6
Msa0096940 AT3G19350.1 51.389 72 35 0 560 631 23 94 9.90e-17 76.6
Msa0096940 AT4G00830.2 27.018 285 174 10 120 397 116 373 1.84e-16 83.2
Msa0096940 AT4G00830.2 24.542 273 184 7 32 295 116 375 7.96e-12 68.6
Msa0096940 AT4G00830.1 27.018 285 174 10 120 397 116 373 1.84e-16 83.2
Msa0096940 AT4G00830.1 24.542 273 184 7 32 295 116 375 7.96e-12 68.6
Msa0096940 AT4G00830.6 27.018 285 174 10 120 397 116 373 1.84e-16 83.2
Msa0096940 AT4G00830.6 24.542 273 184 7 32 295 116 375 7.96e-12 68.6
Msa0096940 AT3G52150.2 31.765 170 110 4 213 380 78 243 7.60e-16 78.2
Msa0096940 AT3G52150.2 28.421 190 117 5 111 286 69 253 9.68e-14 72.0
Msa0096940 AT3G52150.2 26.590 173 113 3 34 192 78 250 3.66e-13 70.5
Msa0096940 AT3G52150.1 31.765 170 110 4 213 380 78 243 7.60e-16 78.2
Msa0096940 AT3G52150.1 28.421 190 117 5 111 286 69 253 9.68e-14 72.0
Msa0096940 AT3G52150.1 26.590 173 113 3 34 192 78 250 3.66e-13 70.5
Msa0096940 AT2G37220.1 28.191 188 107 3 34 194 93 279 1.38e-15 78.2
Msa0096940 AT2G37220.1 25.373 201 127 3 117 294 88 288 7.82e-13 70.1
Msa0096940 AT4G00830.3 27.113 284 167 10 120 397 116 365 2.77e-15 79.3
Msa0096940 AT4G00830.3 24.164 269 182 7 32 295 116 367 4.49e-11 66.2
Msa0096940 AT4G00830.5 27.113 284 167 10 120 397 116 365 2.77e-15 79.3
Msa0096940 AT4G00830.5 24.164 269 182 7 32 295 116 367 4.49e-11 66.2
Msa0096940 AT2G35410.1 28.191 188 116 3 213 392 97 273 5.03e-15 77.0
Msa0096940 AT2G44710.4 22.300 287 200 7 5 280 102 376 9.46e-15 78.2
Msa0096940 AT2G44710.2 22.300 287 200 7 5 280 187 461 1.47e-14 77.8
Msa0096940 AT2G44710.1 22.300 287 200 7 5 280 187 461 1.47e-14 77.8
Msa0096940 AT4G00830.4 24.938 401 235 16 120 493 116 477 2.83e-14 76.3
Msa0096940 AT4G16280.3 28.662 157 105 3 31 182 119 273 4.89e-14 75.5
Msa0096940 AT4G16280.3 24.545 220 138 6 182 396 99 295 2.55e-13 73.6
Msa0096940 AT3G52380.1 24.855 173 114 3 34 190 118 290 7.08e-14 73.6
Msa0096940 AT3G52380.1 29.570 186 115 5 122 294 118 300 1.00e-13 73.2
Msa0096940 AT3G52380.1 28.261 184 128 3 213 394 118 299 6.03e-12 67.8
Msa0096940 AT4G16280.4 28.662 157 105 3 31 182 44 198 8.55e-14 75.1
Msa0096940 AT4G16280.4 24.545 220 138 6 182 396 24 220 4.79e-13 72.8
Msa0096940 AT4G16280.2 28.662 157 105 3 31 182 119 273 8.55e-14 75.5
Msa0096940 AT4G16280.2 24.545 220 138 6 182 396 99 295 4.77e-13 72.8
Msa0096940 AT1G01080.1 26.702 191 125 5 115 291 103 292 1.31e-13 72.4
Msa0096940 AT1G01080.2 26.562 192 125 5 115 291 103 293 1.53e-13 72.4
Msa0096940 AT3G13224.2 28.488 172 119 3 120 289 19 188 4.21e-13 71.6
Msa0096940 AT3G13224.2 25.444 169 103 4 213 376 21 171 1.15e-11 67.4
Msa0096940 AT3G13224.3 28.824 170 117 3 122 289 12 179 4.42e-13 71.6
Msa0096940 AT3G13224.3 25.444 169 103 4 213 376 12 162 9.70e-12 67.4
Msa0096940 AT1G47490.2 27.485 171 114 5 33 193 102 272 1.05e-12 70.1
Msa0096940 AT1G47490.2 27.957 186 127 6 122 300 103 288 1.09e-12 69.7
Msa0096940 AT1G60000.1 24.719 178 129 2 20 192 73 250 1.42e-12 68.6
Msa0096940 AT2G16940.5 27.381 168 104 3 33 184 42 207 2.35e-12 69.7
Msa0096940 AT2G16940.4 27.381 168 104 3 33 184 42 207 2.35e-12 69.7
Msa0096940 AT1G47500.2 26.901 171 115 5 33 193 104 274 3.77e-12 68.2
Msa0096940 AT5G55550.5 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0096940 AT5G55550.4 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0096940 AT5G55550.9 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0096940 AT5G55550.7 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0096940 AT5G55550.1 30.168 179 114 5 213 383 8 183 4.33e-12 69.3
Msa0096940 AT2G16940.1 27.381 168 104 3 33 184 183 348 4.62e-12 69.3
Msa0096940 AT5G55550.2 30.168 179 114 5 213 383 8 183 5.65e-12 68.9
Msa0096940 AT5G55550.3 30.168 179 114 5 213 383 8 183 5.65e-12 68.9
Msa0096940 AT5G55550.6 30.168 179 114 5 213 383 8 183 5.65e-12 68.9
Msa0096940 AT5G55550.11 30.168 179 114 5 213 383 8 183 5.65e-12 68.9
Msa0096940 AT5G47620.1 27.222 180 114 5 213 383 8 179 6.97e-12 68.6
Msa0096940 AT5G47620.2 27.222 180 114 5 213 383 8 179 6.97e-12 68.6
Msa0096940 AT5G47620.5 27.222 180 114 5 213 383 8 179 6.97e-12 68.6
Msa0096940 AT2G16940.2 27.381 168 104 3 33 184 232 397 8.29e-12 68.9
Msa0096940 AT5G50250.1 28.342 187 119 5 213 396 115 289 9.49e-12 66.6
Msa0096940 AT5G50250.1 26.946 167 113 3 34 192 115 280 1.42e-11 66.2
Msa0096940 AT1G01080.3 27.168 173 111 5 115 273 103 274 1.02e-11 66.6
Msa0096940 AT4G19610.1 23.971 413 245 13 31 393 293 686 1.35e-11 68.2
Msa0096940 AT1G17640.2 26.601 203 138 6 109 302 55 255 1.37e-11 67.0
Msa0096940 AT1G17640.1 26.601 203 138 6 109 302 55 255 1.37e-11 67.0
Msa0096940 AT1G17640.3 26.601 203 138 6 109 302 55 255 1.37e-11 67.0
Msa0096940 AT4G26650.1 28.205 195 114 8 206 383 10 195 1.52e-11 67.4
Msa0096940 AT4G26650.2 28.205 195 114 8 206 383 7 192 1.60e-11 67.4
Msa0096940 AT2G47310.1 25.871 201 129 5 213 405 112 300 1.69e-11 67.4
Msa0096940 AT3G13224.1 25.444 169 103 4 213 376 21 171 2.02e-11 64.7
Msa0096940 AT3G13224.1 30.769 143 95 3 122 262 21 161 3.57e-11 63.9
Msa0096940 AT5G47620.4 28.351 194 116 7 213 383 8 201 2.26e-11 67.0
Msa0096940 AT4G24770.1 26.946 167 113 3 34 192 152 317 2.71e-11 65.9
Msa0096940 AT4G24770.2 26.946 167 113 3 34 192 152 317 2.71e-11 65.9
Msa0096940 AT5G03580.1 37.805 82 51 0 316 397 18 99 2.92e-11 60.8
Msa0096940 AT3G52660.3 20.635 252 186 4 32 277 92 335 4.66e-11 65.9
Msa0096940 AT3G52660.1 20.635 252 186 4 32 277 92 335 4.66e-11 65.9
Msa0096940 AT3G52660.2 20.635 252 186 4 32 277 92 335 4.66e-11 65.9
Msa0096940 AT4G14300.1 28.333 180 116 7 213 383 8 183 5.61e-11 65.5
Msa0096940 AT4G14300.2 28.333 180 116 7 213 383 8 183 5.61e-11 65.5
Msa0096940 AT5G40490.1 27.108 166 102 5 213 376 44 192 6.03e-11 65.5

Find 185 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACCAACAATTGGATTTA+TGG 0.118422 1_3:-2677671 Msa0096940:three_prime_UTR
CTTACAGTCCTCTGCTGTTC+AGG 0.204464 1_3:+2678221 None:intergenic
CTCTGAACAACAAATCTATT+AGG 0.219365 1_3:-2682109 Msa0096940:CDS
AATGCAATTGATAAGTTAAA+TGG 0.241081 1_3:-2681010 Msa0096940:CDS
AGTTTCAATGGCGCAGATTC+AGG 0.270119 1_3:-2682524 Msa0096940:exon
TAATAAATGCAGGCTGGATT+TGG 0.270901 1_3:-2678676 Msa0096940:intron
CACTAAAACTGTTAATTAAA+AGG 0.277798 1_3:+2677607 None:intergenic
ACTCGTCGTTCGCTTGGTTA+TGG 0.285708 1_3:-2682313 Msa0096940:CDS
GATCCTCTGCTGACACCATT+TGG 0.296178 1_3:+2680383 None:intergenic
TAAGGTTACCGGCATGCTTC+TGG 0.306768 1_3:-2678026 Msa0096940:CDS
TATCAGCAGCAGCTTGTTCC+TGG 0.324866 1_3:-2678652 Msa0096940:CDS
TCGGTTGTTTATTTCACTCT+TGG 0.326107 1_3:-2677643 Msa0096940:three_prime_UTR
AAGGAAATGTTCTCTGAGTT+TGG 0.327154 1_3:-2680539 Msa0096940:CDS
CTCTTGTATGGTTAGATGCT+TGG 0.332525 1_3:-2678097 Msa0096940:intron
TTATTCAGCGGCTAGGGCTT+TGG 0.337471 1_3:-2682150 Msa0096940:intron
CAGAATCCTCAGCCTCAAAT+TGG 0.340771 1_3:+2681038 None:intergenic
GGTTAGGGTTTGTAGGGATT+TGG 0.342224 1_3:-2682338 Msa0096940:CDS
CAGACCTGCTGCTGCATCAT+TGG 0.343150 1_3:+2678508 None:intergenic
TCTGAACAACAAATCTATTA+GGG 0.353328 1_3:-2682108 Msa0096940:CDS
ATCCTCTGCTGACACCATTT+GGG 0.353883 1_3:+2680384 None:intergenic
GATGGTAGGTCGAAATGTTT+TGG 0.354440 1_3:-2680794 Msa0096940:CDS
TGGTTTCGGTTAGGGTTTGT+AGG 0.361667 1_3:-2682345 Msa0096940:CDS
CTTCCGTAAATGACTCTGAT+AGG 0.368207 1_3:+2680882 None:intergenic
GCTTTAGGATTACCAACAAT+TGG 0.368775 1_3:-2677679 Msa0096940:three_prime_UTR
CTCTACCCTCCTGGTACTCC+TGG 0.376806 1_3:-2679076 Msa0096940:CDS
CTTTGTTCCAATGGTTCAGC+AGG 0.383917 1_3:-2678596 Msa0096940:CDS
TGGACAAGTGGTTTCGGTTA+GGG 0.384091 1_3:-2682353 Msa0096940:CDS
AGGAGGGTAGAGTGGCATTC+GGG 0.388711 1_3:+2679087 None:intergenic
ACCCATGCCCATTCATGCTT+TGG 0.389513 1_3:-2678267 Msa0096940:CDS
TTTAGTTTGATAATGTTTGT+TGG 0.394362 1_3:-2677762 Msa0096940:three_prime_UTR
TCAATCAAATGCAATACTTC+AGG 0.395049 1_3:+2677992 None:intergenic
TTGGACAAGTGGTTTCGGTT+AGG 0.396239 1_3:-2682354 Msa0096940:CDS
AAACCTATCAGAGTCATTTA+CGG 0.396873 1_3:-2680885 Msa0096940:CDS
GCATCATTGGCACTTGCTGT+GGG 0.397308 1_3:+2678521 None:intergenic
CCAAAGCCCATAACAAAACT+AGG 0.398671 1_3:-2682794 None:intergenic
TCAGGTTCAGCATCAAATTC+CGG 0.399929 1_3:-2682506 Msa0096940:CDS
AAAATGAATTTGGAGCTTAT+GGG 0.402355 1_3:-2680850 Msa0096940:CDS
ACTTGTGGAGGCATCATAGC+TGG 0.406997 1_3:+2679019 None:intergenic
TACGATCACTTTAATCAAGT+TGG 0.414109 1_3:-2682373 Msa0096940:CDS
TCAAGTTGGACAAGTGGTTT+CGG 0.415703 1_3:-2682359 Msa0096940:CDS
AACCCGCCGGTGATCGGAAC+GGG 0.416161 1_3:+2682653 None:intergenic
TGCTGTAGCCAAAGCATGAA+TGG 0.417507 1_3:+2678259 None:intergenic
TTGGCTACTCGTCGTTCGCT+TGG 0.419741 1_3:-2682319 Msa0096940:CDS
CACCAGGGCGCTGACCTTGT+TGG 0.423565 1_3:+2678572 None:intergenic
TGTTGGCCCTGCTGAACCAT+TGG 0.424438 1_3:+2678589 None:intergenic
ACTTTAGCCTTGAGAGCATC+TGG 0.424674 1_3:+2677965 None:intergenic
CAGGAGGGTAGAGTGGCATT+CGG 0.428140 1_3:+2679086 None:intergenic
AATGGTGTCAGCAGAGGATC+TGG 0.430305 1_3:-2680380 Msa0096940:CDS
GATTCAGCAGCTAAGGTTAC+CGG 0.435182 1_3:-2678037 Msa0096940:CDS
TGCATCATTGGCACTTGCTG+TGG 0.436359 1_3:+2678520 None:intergenic
TGGCAAACCTCCCATGTCAT+AGG 0.438185 1_3:+2678307 None:intergenic
AGATAGAAGAGCAAGATTGC+AGG 0.438389 1_3:-2680158 Msa0096940:intron
TTGTTGTTTATTCAGCGGCT+AGG 0.443885 1_3:-2682157 Msa0096940:intron
CTTGGACAACAATTTATGTA+TGG 0.445463 1_3:-2679052 Msa0096940:CDS
GGACCTCCTCGGCGTCCACC+AGG 0.449158 1_3:+2678556 None:intergenic
ACAGAAGGTGTAATTGCAAC+AGG 0.450131 1_3:+2679115 None:intergenic
GTGCCGCTCTTGCGACTACT+AGG 0.451348 1_3:+2682065 None:intergenic
CGTGTTTATCGCTACCCTCC+TGG 0.451898 1_3:-2678383 Msa0096940:CDS
GGTGGACGCCGAGGAGGTCC+TGG 0.452687 1_3:-2678553 Msa0096940:CDS
GCCAAGCTACTTTGTTCCAA+TGG 0.453307 1_3:-2678605 Msa0096940:CDS
CTTGTTCCTGGGATGAGACC+TGG 0.460712 1_3:-2678640 Msa0096940:CDS
CCGTTTGAAGGTGCTGGAAT+CGG 0.466182 1_3:+2682481 None:intergenic
CCTCCTGGTACTCCTGGTCT+TGG 0.467154 1_3:-2679070 Msa0096940:CDS
AATTGGATTTATGGATCTAT+CGG 0.467335 1_3:-2677662 Msa0096940:three_prime_UTR
TGGATAAACCCGCCGGTGAT+CGG 0.467982 1_3:+2682647 None:intergenic
AATGACAAGCAGGTGTTTGT+GGG 0.470614 1_3:-2680977 Msa0096940:CDS
ACAGCTCTTGATGCTTCCTC+TGG 0.471511 1_3:+2680338 None:intergenic
AGATCCATAAATCCAATTGT+TGG 0.475065 1_3:+2677667 None:intergenic
GGTTTCGGTTAGGGTTTGTA+GGG 0.477071 1_3:-2682344 Msa0096940:CDS
TCTGGTCAGTCTAAAGGCTA+TGG 0.478122 1_3:-2681067 Msa0096940:CDS
TACCGGCATGCTTCTGGAGA+TGG 0.481524 1_3:-2678020 Msa0096940:CDS
ATCATTGGCACTTGCTGTGG+GGG 0.483844 1_3:+2678523 None:intergenic
GATAATGTTTGTTGGCATCA+AGG 0.484931 1_3:-2677754 Msa0096940:three_prime_UTR
TGTTAATTTCACTAACCCTC+AGG 0.485000 1_3:-2682287 Msa0096940:CDS
CAATGACAAGCAGGTGTTTG+TGG 0.487408 1_3:-2680978 Msa0096940:CDS
GAAACGACGCTGCCGTTTGA+AGG 0.492756 1_3:+2682469 None:intergenic
GATTTGTGAAGAAGTTTCAA+TGG 0.495102 1_3:-2682536 Msa0096940:exon
CTTGTGGAGGCATCATAGCT+GGG 0.501490 1_3:+2679020 None:intergenic
TGTTGTTTATTCAGCGGCTA+GGG 0.503322 1_3:-2682156 Msa0096940:intron
TAGCGATAAACACGTTGCCT+TGG 0.505854 1_3:+2678392 None:intergenic
TGTCCAAGACCAGGAGTACC+AGG 0.506114 1_3:+2679067 None:intergenic
TTACAGTCCTCTGCTGTTCA+GGG 0.507255 1_3:+2678222 None:intergenic
GATGGTTCTGGTCAGTCTAA+AGG 0.507826 1_3:-2681073 Msa0096940:CDS
CATCAAAACAGCACTAGTAA+TGG 0.509723 1_3:+2680826 None:intergenic
AAAATAGCAACTGATGGTTC+TGG 0.512739 1_3:-2681085 Msa0096940:CDS
CAGATTATGCGAGACCCAAA+TGG 0.514056 1_3:-2680398 Msa0096940:CDS
AGTGCCAATGATGCAGCAGC+AGG 0.515523 1_3:-2678512 Msa0096940:intron
TCTTGAATGTTGCTGCGACC+AGG 0.516671 1_3:+2678365 None:intergenic
GGCATTCGGGGCGCAACAGA+AGG 0.519691 1_3:+2679100 None:intergenic
TGGCACAATTACTTCGTACA+AGG 0.519922 1_3:-2680519 Msa0096940:intron
GAAGGTGCTGGAATCGGTGC+CGG 0.521583 1_3:+2682487 None:intergenic
CTAATAGATTTGTTGTTCAG+AGG 0.526125 1_3:+2682110 None:intergenic
GGCCAACAAGGTCAGCGCCC+TGG 0.527805 1_3:-2678574 Msa0096940:CDS
GTTGTTGACCAGGACCTCCT+CGG 0.528383 1_3:+2678545 None:intergenic
TTGCAGCTTGGAGAGATGAA+TGG 0.529066 1_3:-2680232 Msa0096940:intron
TCTGTAGTAGACAAATTTCA+AGG 0.530372 1_3:-2680614 Msa0096940:CDS
GGCTAAAGTTGCTGAAGCCA+TGG 0.530907 1_3:-2677951 Msa0096940:CDS
GTATATAAACGAAACGAAAG+TGG 0.532897 1_3:+2682767 None:intergenic
ACGCTGCCGTTTGAAGGTGC+TGG 0.534574 1_3:+2682475 None:intergenic
GTATCCGCTAGTAGATCAGC+TGG 0.539041 1_3:-2678065 Msa0096940:CDS
GCTGTAGCCAAAGCATGAAT+GGG 0.539748 1_3:+2678260 None:intergenic
CATCATTGGCACTTGCTGTG+GGG 0.539865 1_3:+2678522 None:intergenic
TTCCCGTTCCGATCACCGGC+GGG 0.540872 1_3:-2682655 Msa0096940:five_prime_UTR
AGTGAGGCTAGTTGATCCGC+CGG 0.541519 1_3:+2677890 None:intergenic
TGAGTCACCAGATGCTCTCA+AGG 0.542342 1_3:-2677972 Msa0096940:CDS
ACTATTCCCGTTCCGATCAC+CGG 0.546514 1_3:-2682659 Msa0096940:five_prime_UTR
AAGGTTTGAGCAGACTGTAA+AGG 0.546711 1_3:-2680639 Msa0096940:CDS
GGAACATGATTCAGCAGCTA+AGG 0.546851 1_3:-2678044 Msa0096940:CDS
ATCAGCAGCAGCTTGTTCCT+GGG 0.547574 1_3:-2678651 Msa0096940:CDS
CCGATTCCAGCACCTTCAAA+CGG 0.550647 1_3:-2682481 Msa0096940:CDS
CGCCCTGGTGGACGCCGAGG+AGG 0.553565 1_3:-2678559 Msa0096940:CDS
AACATTTCTCAAAACCTCCA+TGG 0.553981 1_3:+2677934 None:intergenic
AAGGCTGCACTGCACCGCAA+TGG 0.556229 1_3:+2682727 None:intergenic
ACCATTGGAACAAAGTAGCT+TGG 0.559188 1_3:+2678604 None:intergenic
ACATTATCAAACTAAAAGAC+CGG 0.560523 1_3:+2677769 None:intergenic
GACCTCCTCGGCGTCCACCA+GGG 0.561701 1_3:+2678557 None:intergenic
GTCCATCTCCAGAAGCATGC+CGG 0.562964 1_3:+2678018 None:intergenic
TGTTGCTGTTGCACAGCGAA+AGG 0.568244 1_3:-2680182 Msa0096940:CDS
CTTTAATCAAGTTGGACAAG+TGG 0.569030 1_3:-2682365 Msa0096940:CDS
CGAATGCCACTCTACCCTCC+TGG 0.569240 1_3:-2679085 Msa0096940:CDS
CAAAGCCCATAACAAAACTA+GGG 0.573750 1_3:-2682793 None:intergenic
GACGTCGTAACGAACTGATT+CGG 0.574989 1_3:+2682442 None:intergenic
TATGATAATCATACTTGTGG+AGG 0.575760 1_3:+2679007 None:intergenic
ACAGTCCTCTGCTGTTCAGG+GGG 0.577307 1_3:+2678224 None:intergenic
GATGACAAGGAGTGGTATGT+TGG 0.578166 1_3:-2680704 Msa0096940:CDS
GGAGTACCAGGAGGGTAGAG+TGG 0.578299 1_3:+2679079 None:intergenic
AGATGCTGCTAAAGCTGTTG+AGG 0.579437 1_3:-2680747 Msa0096940:CDS
GCCCCTGTGCAAAACATTGG+TGG 0.580664 1_3:-2678341 Msa0096940:CDS
GTATGGTTAGATGCTTGGAG+AGG 0.583459 1_3:-2678092 Msa0096940:intron
ATGGTTCAGCAGGGCCAACA+AGG 0.583994 1_3:-2678586 Msa0096940:CDS
CCTGGGATGAGACCTGGTGG+TGG 0.588301 1_3:-2678634 Msa0096940:CDS
GGAACAAAGTAGCTTGGCAT+AGG 0.588556 1_3:+2678610 None:intergenic
AGCCAAAGCATGAATGGGCA+TGG 0.590578 1_3:+2678265 None:intergenic
AATTTCACTAACCCTCAGGA+TGG 0.592051 1_3:-2682283 Msa0096940:intron
GTTACGACGTCGTTGTACGT+TGG 0.592079 1_3:-2682430 Msa0096940:CDS
AACGAAACTAACCATCCTGA+GGG 0.595204 1_3:+2682272 None:intergenic
CCACCACCAGGTCTCATCCC+AGG 0.598755 1_3:+2678634 None:intergenic
ATTCCCGTTCCGATCACCGG+CGG 0.601369 1_3:-2682656 Msa0096940:five_prime_UTR
TCAAATGCAATACTTCAGGC+TGG 0.601392 1_3:+2677996 None:intergenic
CAACAATTTATGTATGGCCA+AGG 0.601992 1_3:-2679046 Msa0096940:CDS
TCTTGCAAAATAGCAACTGA+TGG 0.602362 1_3:-2681091 Msa0096940:CDS
ATGGGTGGAATTCATGTAGA+CGG 0.603114 1_3:+2677837 None:intergenic
AAAGCTGTTGAGGCATTGAA+TGG 0.605011 1_3:-2680737 Msa0096940:CDS
TACAGTCCTCTGCTGTTCAG+GGG 0.607977 1_3:+2678223 None:intergenic
GAACGTGAGCAAGAGCTGAA+AGG 0.610322 1_3:-2680662 Msa0096940:CDS
AAACCCGCCGGTGATCGGAA+CGG 0.610598 1_3:+2682652 None:intergenic
TTGTGGAGGCATCATAGCTG+GGG 0.612919 1_3:+2679021 None:intergenic
AAAGCATGAATGGGCATGGG+TGG 0.613260 1_3:+2678269 None:intergenic
GTGAGCAAGAGCTGAAAGGA+AGG 0.614410 1_3:-2680658 Msa0096940:CDS
AGAAATGTTACTCAACAGCA+AGG 0.614788 1_3:-2677920 Msa0096940:CDS
TGAATGTTGCTGCGACCAGG+AGG 0.615427 1_3:+2678368 None:intergenic
CAGCGCCCTGGTGGACGCCG+AGG 0.618945 1_3:-2678562 Msa0096940:CDS
GACCCAAATGGTGTCAGCAG+AGG 0.620312 1_3:-2680386 Msa0096940:CDS
AGAGTCGTTGAGAGAGAGTG+AGG 0.620798 1_3:+2677874 None:intergenic
AATGTTGATCAATGACAAGC+AGG 0.622205 1_3:-2680987 Msa0096940:CDS
TGATGAGAGATGCTGATGGT+AGG 0.623806 1_3:-2680808 Msa0096940:CDS
GGAGGGTAGAGTGGCATTCG+GGG 0.625817 1_3:+2679088 None:intergenic
TTTGTTCCAATGGTTCAGCA+GGG 0.626797 1_3:-2678595 Msa0096940:CDS
GTGAGGCTAGTTGATCCGCC+GGG 0.627783 1_3:+2677891 None:intergenic
TGTGGAGGCATCATAGCTGG+GGG 0.627960 1_3:+2679022 None:intergenic
TATCTCTATCTTGCTTACGT+AGG 0.631591 1_3:+2680948 None:intergenic
AGGAATGATGTCCTATGACA+TGG 0.633264 1_3:-2678318 Msa0096940:CDS
GATGCCCCTGTGCAAAACAT+TGG 0.633837 1_3:-2678344 Msa0096940:CDS
GCCAAAGCATGAATGGGCAT+GGG 0.635175 1_3:+2678266 None:intergenic
ATAAATTGTTGTCCAAGACC+AGG 0.638542 1_3:+2679058 None:intergenic
TCAACAGCAAGGAAACAGCC+CGG 0.646568 1_3:-2677909 Msa0096940:CDS
CAACGAAACTAACCATCCTG+AGG 0.649245 1_3:+2682271 None:intergenic
CCTGTGCAAAACATTGGTGG+AGG 0.654336 1_3:-2678338 Msa0096940:CDS
GTTCCTGGGATGAGACCTGG+TGG 0.655055 1_3:-2678637 Msa0096940:CDS
TGTGCAACAGCAACATAGAG+AGG 0.660072 1_3:+2680190 None:intergenic
GATCCTAGTAGTCGCAAGAG+CGG 0.660494 1_3:-2682068 Msa0096940:CDS
GGAATGATGTCCTATGACAT+GGG 0.661604 1_3:-2678317 Msa0096940:CDS
CTTGGCATAGGACCACCACC+AGG 0.662106 1_3:+2678622 None:intergenic
GAATGTTGCTGCGACCAGGA+GGG 0.664998 1_3:+2678369 None:intergenic
TAAAGTTGCTGAAGCCATGG+AGG 0.667343 1_3:-2677948 Msa0096940:CDS
CAAGACCAGGAGTACCAGGA+GGG 0.671251 1_3:+2679071 None:intergenic
GGTGGTACAACATCACGAAG+TGG 0.685790 1_3:+2678287 None:intergenic
CGGAACGGGAATAGTATCAG+CGG 0.687230 1_3:+2682667 None:intergenic
TGTTCCAGCTGATCTACTAG+CGG 0.690170 1_3:+2678061 None:intergenic
AAAACACGTAAGCACCATTG+CGG 0.698048 1_3:-2682741 Msa0096940:five_prime_UTR
GTTGTACGTTGGTGATCTTG+AGG 0.704303 1_3:-2682419 Msa0096940:CDS
CAACAAGGTCAGCGCCCTGG+TGG 0.709951 1_3:-2678571 Msa0096940:CDS
ATGATGTCCTATGACATGGG+AGG 0.725560 1_3:-2678314 Msa0096940:CDS
CCAAGACCAGGAGTACCAGG+AGG 0.726994 1_3:+2679070 None:intergenic
ACAGCAAGGAAACAGCCCGG+CGG 0.789531 1_3:-2677906 Msa0096940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAGAAATAAGAAAAAAA+GGG + chr1_3:2681081-2681100 None:intergenic 10.0%
!! ATATAAGAAATAAGAAAAAA+AGG + chr1_3:2681082-2681101 None:intergenic 10.0%
!!! TTTTTTTCTTATTTCTTATA+TGG - chr1_3:2681081-2681100 Msa0096940:CDS 10.0%
!! AAAAAAAAAAAAAAAAAACG+GGG + chr1_3:2682519-2682538 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTTTGC+CGG - chr1_3:2682522-2682541 Msa0096940:exon 10.0%
!!! AAAAGTTTCAGTTTTTTTTT+TGG + chr1_3:2677693-2677712 None:intergenic 15.0%
!!! ATTTTATATGTTTTGTGATT+AGG - chr1_3:2678085-2678104 Msa0096940:CDS 15.0%
!!! TTTTATATGTTTTGTGATTA+GGG - chr1_3:2678086-2678105 Msa0096940:intron 15.0%
!! ATTATGAATATTTATCACAT+TGG - chr1_3:2678374-2678393 Msa0096940:CDS 15.0%
!! ATAAGAAATAAGAAAAAAAG+GGG + chr1_3:2681080-2681099 None:intergenic 15.0%
!!! TGATAAATTTTGAACTAAAT+TGG + chr1_3:2681601-2681620 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAAACGG+GGG + chr1_3:2682518-2682537 None:intergenic 15.0%
!!! CTGAAATTTTTTTGGTTTTT+GGG + chr1_3:2677618-2677637 None:intergenic 20.0%
!!! ACTGAAATTTTTTTGGTTTT+TGG + chr1_3:2677619-2677638 None:intergenic 20.0%
!!! TCAGTTTTTTTTTTGGATTT+TGG + chr1_3:2677686-2677705 None:intergenic 20.0%
!!! ACACTAAATTGATAGTATAT+TGG + chr1_3:2678477-2678496 None:intergenic 20.0%
!!! ACTATCAATTTAGTGTTTTA+AGG - chr1_3:2678481-2678500 Msa0096940:intron 20.0%
!!! ATGAAAATAAGTTGAGTTTA+TGG - chr1_3:2678727-2678746 Msa0096940:intron 20.0%
!!! GAATTTATGAAAATAGCTTT+TGG + chr1_3:2678821-2678840 None:intergenic 20.0%
!! TATATCCATAGTTTAATCAA+TGG - chr1_3:2678900-2678919 Msa0096940:intron 20.0%
!! AATGCAATTGATAAGTTAAA+TGG - chr1_3:2679300-2679319 Msa0096940:intron 20.0%
!!! ATGGGTTAAAAGAATTTAAT+TGG + chr1_3:2679885-2679904 None:intergenic 20.0%
!!! TTTCATGTTTAAGTTAATCA+AGG + chr1_3:2680369-2680388 None:intergenic 20.0%
!! CACAATTATCATACAATATA+TGG + chr1_3:2680425-2680444 None:intergenic 20.0%
!!! TTCAAGAATCTTTTTTTCAT+TGG - chr1_3:2680451-2680470 Msa0096940:intron 20.0%
!!! TCAAGAATCTTTTTTTCATT+GGG - chr1_3:2680452-2680471 Msa0096940:intron 20.0%
!! AAATATGATAATCATACTTG+TGG + chr1_3:2681309-2681328 None:intergenic 20.0%
!! AAAAAAAAAAAAAAAACGGG+GGG + chr1_3:2682517-2682536 None:intergenic 20.0%
!!! TTTAGTTTGATAATGTTTGT+TGG - chr1_3:2682548-2682567 Msa0096940:five_prime_UTR 20.0%
!! CACTAAAACTGTTAATTAAA+AGG + chr1_3:2682706-2682725 None:intergenic 20.0%
!!! AATTTTTTTGGTTTTTGGGA+GGG + chr1_3:2677614-2677633 None:intergenic 25.0%
!!! AAATTTTTTTGGTTTTTGGG+AGG + chr1_3:2677615-2677634 None:intergenic 25.0%
!!! TTTTTTTGCAGAACTGATTA+GGG - chr1_3:2677709-2677728 Msa0096940:three_prime_UTR 25.0%
! TCTGAACAACAAATCTATTA+GGG - chr1_3:2678202-2678221 Msa0096940:intron 25.0%
!!! CACTGCTAATATTTTTATCA+AGG - chr1_3:2678265-2678284 Msa0096940:CDS 25.0%
!!! GCATTTTTTATCTCTTATCT+TGG - chr1_3:2678289-2678308 Msa0096940:CDS 25.0%
! CTTATCTTGGTAGAATTTAT+AGG - chr1_3:2678302-2678321 Msa0096940:CDS 25.0%
! AATTTATAGGCAGTTTAATC+AGG - chr1_3:2678315-2678334 Msa0096940:CDS 25.0%
! ACAATAAGTCGTTAAATGTA+GGG + chr1_3:2678401-2678420 None:intergenic 25.0%
! CTCAGATGTTTATTTCAAAA+AGG + chr1_3:2678552-2678571 None:intergenic 25.0%
! TTTGCCTATTTGACTAATAA+AGG - chr1_3:2678579-2678598 Msa0096940:CDS 25.0%
!! GCTTATAACTGTTTTGTATA+TGG - chr1_3:2678669-2678688 Msa0096940:intron 25.0%
!! TAACTGTTTTGTATATGGTA+TGG - chr1_3:2678674-2678693 Msa0096940:intron 25.0%
!! AACTGTTTTGTATATGGTAT+GGG - chr1_3:2678675-2678694 Msa0096940:intron 25.0%
!!! GTTGTTTTTAGAAGCTATAT+TGG - chr1_3:2678697-2678716 Msa0096940:intron 25.0%
!!! GTTGTTTTTAGAAGCTATAT+TGG - chr1_3:2678697-2678716 Msa0096940:intron 25.0%
! CATAAATTTAGAGACTGTTT+GGG + chr1_3:2678845-2678864 None:intergenic 25.0%
! ACATAAATTTAGAGACTGTT+TGG + chr1_3:2678846-2678865 None:intergenic 25.0%
! AGTCTCTAAATTTATGTCAA+TGG - chr1_3:2678849-2678868 Msa0096940:intron 25.0%
!! CAATTCCATTGATTAAACTA+TGG + chr1_3:2678908-2678927 None:intergenic 25.0%
! CATAGTTTAATCAATGGAAT+TGG - chr1_3:2678906-2678925 Msa0096940:intron 25.0%
!!! ATTGGTTTTTATGATGTTGT+TGG - chr1_3:2679122-2679141 Msa0096940:CDS 25.0%
! GATGACTTGAAAAATGAATT+TGG - chr1_3:2679450-2679469 Msa0096940:intron 25.0%
!! AAAAATGAATTTGGAGCTTA+TGG - chr1_3:2679459-2679478 Msa0096940:intron 25.0%
!! AAAATGAATTTGGAGCTTAT+GGG - chr1_3:2679460-2679479 Msa0096940:intron 25.0%
! AAAAAAAGATTCTTGAAGCT+AGG + chr1_3:2680448-2680467 None:intergenic 25.0%
! TTTGTTGCCAAATTAAAGAT+AGG - chr1_3:2680730-2680749 Msa0096940:CDS 25.0%
!! TTTTCCGAGTTAAATAACAT+TGG - chr1_3:2680989-2681008 Msa0096940:CDS 25.0%
!! CAAACCAATGTTATTTAACT+CGG + chr1_3:2680996-2681015 None:intergenic 25.0%
! AACAAAATAACAGCTGAATA+TGG + chr1_3:2681338-2681357 None:intergenic 25.0%
! AAAACAAAGTCAAAATGAAC+AGG + chr1_3:2681431-2681450 None:intergenic 25.0%
!!! TTTTGACTTTGTTTTACTTG+TGG - chr1_3:2681436-2681455 Msa0096940:intron 25.0%
!!! TTTGACTTTGTTTTACTTGT+GGG - chr1_3:2681437-2681456 Msa0096940:intron 25.0%
! CAAAACATGTTATATGTGAA+GGG + chr1_3:2681512-2681531 None:intergenic 25.0%
! ATCACTTCAATAATAAATGC+AGG - chr1_3:2681624-2681643 Msa0096940:intron 25.0%
! TATACTCATCTTTCATATTG+AGG - chr1_3:2681858-2681877 Msa0096940:intron 25.0%
!! TGCTAATATTTCTGCAAATT+TGG - chr1_3:2682123-2682142 Msa0096940:CDS 25.0%
!! GCTAATATTTCTGCAAATTT+GGG - chr1_3:2682124-2682143 Msa0096940:CDS 25.0%
! ACAAGAGAAAATATCAGTAA+AGG + chr1_3:2682200-2682219 None:intergenic 25.0%
!! TACTGATATTTTCTCTTGTA+TGG - chr1_3:2682201-2682220 Msa0096940:intron 25.0%
! ACATTATCAAACTAAAAGAC+CGG + chr1_3:2682544-2682563 None:intergenic 25.0%
!!! TTTTTATTTGGTCATGCTTT+AGG - chr1_3:2682616-2682635 Msa0096940:five_prime_UTR 25.0%
! ATTACCAACAATTGGATTTA+TGG - chr1_3:2682639-2682658 Msa0096940:five_prime_UTR 25.0%
! AATTGGATTTATGGATCTAT+CGG - chr1_3:2682648-2682667 Msa0096940:five_prime_UTR 25.0%
GTATATAAACGAAACGAAAG+TGG + chr1_3:2677546-2677565 None:intergenic 30.0%
!!! CGGAGAAACTGAAATTTTTT+TGG + chr1_3:2677626-2677645 None:intergenic 30.0%
!!! CTTTTTTTGCAGAACTGATT+AGG - chr1_3:2677708-2677727 Msa0096940:three_prime_UTR 30.0%
GATTTGTGAAGAAGTTTCAA+TGG - chr1_3:2677774-2677793 Msa0096940:three_prime_UTR 30.0%
TACGATCACTTTAATCAAGT+TGG - chr1_3:2677937-2677956 Msa0096940:CDS 30.0%
! ATGTTTTGTGATTAGGGTTT+TGG - chr1_3:2678092-2678111 Msa0096940:intron 30.0%
!! TGTTGTTGTTGTTTATTCAG+CGG - chr1_3:2678148-2678167 Msa0096940:intron 30.0%
!! CTAATAGATTTGTTGTTCAG+AGG + chr1_3:2678203-2678222 None:intergenic 30.0%
CTCTGAACAACAAATCTATT+AGG - chr1_3:2678201-2678220 Msa0096940:intron 30.0%
!! ATAATCTCCTGTATCGATTT+CGG + chr1_3:2678359-2678378 None:intergenic 30.0%
GACAATAAGTCGTTAAATGT+AGG + chr1_3:2678402-2678421 None:intergenic 30.0%
TTAACGACTTATTGTCAAGT+AGG - chr1_3:2678406-2678425 Msa0096940:intron 30.0%
ATGTAAAATTTGAGAGTAGC+AGG - chr1_3:2678524-2678543 Msa0096940:CDS 30.0%
TGTAAAATTTGAGAGTAGCA+GGG - chr1_3:2678525-2678544 Msa0096940:CDS 30.0%
TCAGCCTTTATTAGTCAAAT+AGG + chr1_3:2678586-2678605 None:intergenic 30.0%
CTTAAATAAGCCAATCAAAC+AGG - chr1_3:2678877-2678896 Msa0096940:intron 30.0%
TATGGATATACCTGTTTGAT+TGG + chr1_3:2678890-2678909 None:intergenic 30.0%
! AATGGAATTGGAATTAGTCT+TGG - chr1_3:2678918-2678937 Msa0096940:intron 30.0%
ACAAGACATATACAACTAAG+TGG + chr1_3:2679003-2679022 None:intergenic 30.0%
CTTGATTTATGTGAGTAGTT+TGG - chr1_3:2679055-2679074 Msa0096940:CDS 30.0%
CAACATCATAAAAACCAATC+AGG + chr1_3:2679121-2679140 None:intergenic 30.0%
!!! CATGACACTTTTTCTTCTTT+CGG - chr1_3:2679186-2679205 Msa0096940:intron 30.0%
AAACCTATCAGAGTCATTTA+CGG - chr1_3:2679425-2679444 Msa0096940:intron 30.0%
!! TGGTAAAAAAGTTGATGACA+AGG - chr1_3:2679593-2679612 Msa0096940:intron 30.0%
TCTGTAGTAGACAAATTTCA+AGG - chr1_3:2679696-2679715 Msa0096940:intron 30.0%
GAACTTGTATCTCAAAAACT+TGG - chr1_3:2679722-2679741 Msa0096940:intron 30.0%
! CTTGAGTTTTTCATCAGTAA+TGG + chr1_3:2679754-2679773 None:intergenic 30.0%
CATTACTGATGAAAAACTCA+AGG - chr1_3:2679752-2679771 Msa0096940:intron 30.0%
!! CTTTTAACTGATATCTGTGT+CGG - chr1_3:2679828-2679847 Msa0096940:intron 30.0%
! AGCTGTAAGTCTAAAACTAT+TGG - chr1_3:2679989-2680008 Msa0096940:intron 30.0%
! TGTAAGTCTAAAACTATTGG+TGG - chr1_3:2679992-2680011 Msa0096940:intron 30.0%
TACAAGAAACTTTGTAAGAG+AGG - chr1_3:2680241-2680260 Msa0096940:intron 30.0%
ACAAGAAACTTTGTAAGAGA+GGG - chr1_3:2680242-2680261 Msa0096940:intron 30.0%
AAATTAAAGATAGGAGTGGT+GGG - chr1_3:2680739-2680758 Msa0096940:CDS 30.0%
ACTATATAGAGTAAGGGAAA+TGG + chr1_3:2681056-2681075 None:intergenic 30.0%
TATGGTCTATGATATGTTTG+CGG - chr1_3:2681099-2681118 Msa0096940:CDS 30.0%
CTTAATTACTTTCTTCATGC+AGG - chr1_3:2681152-2681171 Msa0096940:CDS 30.0%
CTTGGACAACAATTTATGTA+TGG - chr1_3:2681258-2681277 Msa0096940:intron 30.0%
TATGATAATCATACTTGTGG+AGG + chr1_3:2681306-2681325 None:intergenic 30.0%
! AGTTTTGCATCAGTATAACA+AGG + chr1_3:2681463-2681482 None:intergenic 30.0%
TTATACTGATGCAAAACTGT+GGG - chr1_3:2681465-2681484 Msa0096940:intron 30.0%
GCAAAACATGTTATATGTGA+AGG + chr1_3:2681513-2681532 None:intergenic 30.0%
CAGAAATATTAGCAGCAAAA+AGG + chr1_3:2682117-2682136 None:intergenic 30.0%
TCAATCAAATGCAATACTTC+AGG + chr1_3:2682321-2682340 None:intergenic 30.0%
AGATCCATAAATCCAATTGT+TGG + chr1_3:2682646-2682665 None:intergenic 30.0%
!!! AATGGTGCTTACGTGTTTTT+TGG + chr1_3:2677568-2677587 None:intergenic 35.0%
!! CTTTAATCAAGTTGGACAAG+TGG - chr1_3:2677945-2677964 Msa0096940:CDS 35.0%
TGTTAATTTCACTAACCCTC+AGG - chr1_3:2678023-2678042 Msa0096940:CDS 35.0%
!! TTAGGGTTTTGGTGAAATTG+TGG - chr1_3:2678103-2678122 Msa0096940:intron 35.0%
!! GACTAATAAAGGCTGATTTG+AGG - chr1_3:2678590-2678609 Msa0096940:CDS 35.0%
TCAATTGAACTGAACCTGAT+TGG - chr1_3:2679104-2679123 Msa0096940:CDS 35.0%
TCTTGCAAAATAGCAACTGA+TGG - chr1_3:2679219-2679238 Msa0096940:intron 35.0%
AAAATAGCAACTGATGGTTC+TGG - chr1_3:2679225-2679244 Msa0096940:intron 35.0%
!!! CTATGGTTTTGTCCAATTTG+AGG - chr1_3:2679260-2679279 Msa0096940:intron 35.0%
AATGTTGATCAATGACAAGC+AGG - chr1_3:2679323-2679342 Msa0096940:intron 35.0%
TATCTCTATCTTGCTTACGT+AGG + chr1_3:2679365-2679384 None:intergenic 35.0%
CATCAAAACAGCACTAGTAA+TGG + chr1_3:2679487-2679506 None:intergenic 35.0%
!! AAAAAGTTGATGACAAGGAG+TGG - chr1_3:2679598-2679617 Msa0096940:intron 35.0%
AAGGAAATGTTCTCTGAGTT+TGG - chr1_3:2679771-2679790 Msa0096940:intron 35.0%
!!! TTTTTTAATGCTGCAGACGT+TGG - chr1_3:2679859-2679878 Msa0096940:intron 35.0%
CGCATAATCTGCAGTATTAT+GGG + chr1_3:2679903-2679922 None:intergenic 35.0%
TCGCATAATCTGCAGTATTA+TGG + chr1_3:2679904-2679923 None:intergenic 35.0%
!!! CAGAAACCTCTCGTTTTTTA+TGG - chr1_3:2680329-2680348 Msa0096940:intron 35.0%
TGCAAACCATAAAAAACGAG+AGG + chr1_3:2680338-2680357 None:intergenic 35.0%
AGACATTCTCACAGTATACA+AGG + chr1_3:2680513-2680532 None:intergenic 35.0%
TGCCAAATTAAAGATAGGAG+TGG - chr1_3:2680735-2680754 Msa0096940:CDS 35.0%
CACCACTCCTATCTTTAATT+TGG + chr1_3:2680740-2680759 None:intergenic 35.0%
CAAATTAAAGATAGGAGTGG+TGG - chr1_3:2680738-2680757 Msa0096940:CDS 35.0%
! TTTGACTTTGACTAACGTCT+TGG - chr1_3:2680945-2680964 Msa0096940:CDS 35.0%
AAAACTCATCAACTCAGTTG+GGG + chr1_3:2680973-2680992 None:intergenic 35.0%
GAAAACTCATCAACTCAGTT+GGG + chr1_3:2680974-2680993 None:intergenic 35.0%
! AGGCACAATTTTCACAAATG+AGG - chr1_3:2681172-2681191 Msa0096940:intron 35.0%
ATAAATTGTTGTCCAAGACC+AGG + chr1_3:2681255-2681274 None:intergenic 35.0%
CAACAATTTATGTATGGCCA+AGG - chr1_3:2681264-2681283 Msa0096940:intron 35.0%
AAATAACAGCTGAATATGGC+AGG + chr1_3:2681334-2681353 None:intergenic 35.0%
GTTATACTGATGCAAAACTG+TGG - chr1_3:2681464-2681483 Msa0096940:intron 35.0%
CTTCAATAATAAATGCAGGC+TGG - chr1_3:2681628-2681647 Msa0096940:intron 35.0%
TAATAAATGCAGGCTGGATT+TGG - chr1_3:2681634-2681653 Msa0096940:intron 35.0%
!! TTTCATATTGAGGTACTGAC+AGG - chr1_3:2681868-2681887 Msa0096940:intron 35.0%
!! TTCATATTGAGGTACTGACA+GGG - chr1_3:2681869-2681888 Msa0096940:intron 35.0%
TTTCTGCTCTATGATTGTTG+TGG - chr1_3:2682167-2682186 Msa0096940:intron 35.0%
AACATTTCTCAAAACCTCCA+TGG + chr1_3:2682379-2682398 None:intergenic 35.0%
AGAAATGTTACTCAACAGCA+AGG - chr1_3:2682390-2682409 Msa0096940:CDS 35.0%
AAAAAAAAAAAACGGGGGGT+GGG + chr1_3:2682513-2682532 None:intergenic 35.0%
AAAAAAAAAAAAACGGGGGG+TGG + chr1_3:2682514-2682533 None:intergenic 35.0%
! GATAATGTTTGTTGGCATCA+AGG - chr1_3:2682556-2682575 Msa0096940:five_prime_UTR 35.0%
!! GCTTTAGGATTACCAACAAT+TGG - chr1_3:2682631-2682650 Msa0096940:five_prime_UTR 35.0%
TCGGTTGTTTATTTCACTCT+TGG - chr1_3:2682667-2682686 Msa0096940:five_prime_UTR 35.0%
AAAACACGTAAGCACCATTG+CGG - chr1_3:2677569-2677588 Msa0096940:three_prime_UTR 40.0%
TCAGGTTCAGCATCAAATTC+CGG - chr1_3:2677804-2677823 Msa0096940:three_prime_UTR 40.0%
!! TCAAGTTGGACAAGTGGTTT+CGG - chr1_3:2677951-2677970 Msa0096940:CDS 40.0%
AATTTCACTAACCCTCAGGA+TGG - chr1_3:2678027-2678046 Msa0096940:CDS 40.0%
AACGAAACTAACCATCCTGA+GGG + chr1_3:2678041-2678060 None:intergenic 40.0%
!! TTGTTGTTTATTCAGCGGCT+AGG - chr1_3:2678153-2678172 Msa0096940:intron 40.0%
! TGTTGTTTATTCAGCGGCTA+GGG - chr1_3:2678154-2678173 Msa0096940:intron 40.0%
TTTGTCTCCGAAATCGATAC+AGG - chr1_3:2678349-2678368 Msa0096940:CDS 40.0%
TCCACTGAAGAACTAGATAG+TGG - chr1_3:2678957-2678976 Msa0096940:intron 40.0%
CCACTGAAGAACTAGATAGT+GGG - chr1_3:2678958-2678977 Msa0096940:intron 40.0%
! GTTGTTGGTTGTGCAGAATT+TGG - chr1_3:2679137-2679156 Msa0096940:CDS 40.0%
!! TTTTGTCCAATTTGAGGCTG+AGG - chr1_3:2679266-2679285 Msa0096940:intron 40.0%
AATGACAAGCAGGTGTTTGT+GGG - chr1_3:2679333-2679352 Msa0096940:intron 40.0%
CTTCCGTAAATGACTCTGAT+AGG + chr1_3:2679431-2679450 None:intergenic 40.0%
!! GTTTTGATGAGAGATGCTGA+TGG - chr1_3:2679498-2679517 Msa0096940:intron 40.0%
! GATGGTAGGTCGAAATGTTT+TGG - chr1_3:2679516-2679535 Msa0096940:intron 40.0%
!! AAAGCTGTTGAGGCATTGAA+TGG - chr1_3:2679573-2679592 Msa0096940:intron 40.0%
AAGGTTTGAGCAGACTGTAA+AGG - chr1_3:2679671-2679690 Msa0096940:intron 40.0%
TGGCACAATTACTTCGTACA+AGG - chr1_3:2679791-2679810 Msa0096940:intron 40.0%
! TGTTGCATTTTCAACTCCAG+AGG - chr1_3:2679956-2679975 Msa0096940:intron 40.0%
AGATAGAAGAGCAAGATTGC+AGG - chr1_3:2680152-2680171 Msa0096940:intron 40.0%
AAACTTTGTAAGAGAGGGTC+TGG - chr1_3:2680247-2680266 Msa0096940:intron 40.0%
!! CCAATTTTGGTGGGAAAGTT+TGG + chr1_3:2680553-2680572 None:intergenic 40.0%
CCAAACTTTCCCACCAAAAT+TGG - chr1_3:2680550-2680569 Msa0096940:CDS 40.0%
AGTCGAATTTGGACCTTGAA+AGG - chr1_3:2680583-2680602 Msa0096940:CDS 40.0%
!! CTTATTTTCCCTTGCAAGTG+AGG - chr1_3:2680671-2680690 Msa0096940:CDS 40.0%
GGAAAACTCATCAACTCAGT+TGG + chr1_3:2680975-2680994 None:intergenic 40.0%
!! AGGGGCACTATATAGAGTAA+GGG + chr1_3:2681062-2681081 None:intergenic 40.0%
!! AAGGGGCACTATATAGAGTA+AGG + chr1_3:2681063-2681082 None:intergenic 40.0%
GTCTATGATATGTTTGCGGA+GGG - chr1_3:2681103-2681122 Msa0096940:CDS 40.0%
! ACAGAAGGTGTAATTGCAAC+AGG + chr1_3:2681198-2681217 None:intergenic 40.0%
!! ACATGTTTTGCTGTGTATGC+TGG - chr1_3:2681522-2681541 Msa0096940:intron 40.0%
ACCATTGGAACAAAGTAGCT+TGG + chr1_3:2681709-2681728 None:intergenic 40.0%
TTTGTTCCAATGGTTCAGCA+GGG - chr1_3:2681715-2681734 Msa0096940:intron 40.0%
! TTTTTGCTCAGATGCTTCCA+AGG - chr1_3:2681901-2681920 Msa0096940:intron 40.0%
AGGAATGATGTCCTATGACA+TGG - chr1_3:2681992-2682011 Msa0096940:intron 40.0%
GGAATGATGTCCTATGACAT+GGG - chr1_3:2681993-2682012 Msa0096940:intron 40.0%
! TGGGTTCAGTTCTCATGTTT+TGG - chr1_3:2682143-2682162 Msa0096940:CDS 40.0%
CTCTTGTATGGTTAGATGCT+TGG - chr1_3:2682213-2682232 Msa0096940:intron 40.0%
TCAAATGCAATACTTCAGGC+TGG + chr1_3:2682317-2682336 None:intergenic 40.0%
ATGGGTGGAATTCATGTAGA+CGG + chr1_3:2682476-2682495 None:intergenic 40.0%
AAAAAAAAAAACGGGGGGTG+GGG + chr1_3:2682512-2682531 None:intergenic 40.0%
! TGGATTTTGGATAAACCCGC+CGG + chr1_3:2677673-2677692 None:intergenic 45.0%
AGTTTCAATGGCGCAGATTC+AGG - chr1_3:2677786-2677805 Msa0096940:three_prime_UTR 45.0%
GACGTCGTAACGAACTGATT+CGG + chr1_3:2677871-2677890 None:intergenic 45.0%
!! GTTGTACGTTGGTGATCTTG+AGG - chr1_3:2677891-2677910 Msa0096940:CDS 45.0%
TTGGACAAGTGGTTTCGGTT+AGG - chr1_3:2677956-2677975 Msa0096940:CDS 45.0%
TGGACAAGTGGTTTCGGTTA+GGG - chr1_3:2677957-2677976 Msa0096940:CDS 45.0%
TGGTTTCGGTTAGGGTTTGT+AGG - chr1_3:2677965-2677984 Msa0096940:CDS 45.0%
GGTTTCGGTTAGGGTTTGTA+GGG - chr1_3:2677966-2677985 Msa0096940:CDS 45.0%
GGTTAGGGTTTGTAGGGATT+TGG - chr1_3:2677972-2677991 Msa0096940:CDS 45.0%
CAACGAAACTAACCATCCTG+AGG + chr1_3:2678042-2678061 None:intergenic 45.0%
!! AGGCTGATTTGAGGTCTGTT+TGG - chr1_3:2678599-2678618 Msa0096940:CDS 45.0%
!! CCCACTATCTAGTTCTTCAG+TGG + chr1_3:2678961-2678980 None:intergenic 45.0%
!! GATGGTTCTGGTCAGTCTAA+AGG - chr1_3:2679237-2679256 Msa0096940:intron 45.0%
TCTGGTCAGTCTAAAGGCTA+TGG - chr1_3:2679243-2679262 Msa0096940:intron 45.0%
CAGAATCCTCAGCCTCAAAT+TGG + chr1_3:2679275-2679294 None:intergenic 45.0%
CAATGACAAGCAGGTGTTTG+TGG - chr1_3:2679332-2679351 Msa0096940:intron 45.0%
TGATGAGAGATGCTGATGGT+AGG - chr1_3:2679502-2679521 Msa0096940:intron 45.0%
AGATGCTGCTAAAGCTGTTG+AGG - chr1_3:2679563-2679582 Msa0096940:intron 45.0%
GATGACAAGGAGTGGTATGT+TGG - chr1_3:2679606-2679625 Msa0096940:intron 45.0%
CAGATTATGCGAGACCCAAA+TGG - chr1_3:2679912-2679931 Msa0096940:intron 45.0%
ATCCTCTGCTGACACCATTT+GGG + chr1_3:2679929-2679948 None:intergenic 45.0%
! ATGCGATGTTACTTGCAGCT+TGG - chr1_3:2680066-2680085 Msa0096940:intron 45.0%
TTGCAGCTTGGAGAGATGAA+TGG - chr1_3:2680078-2680097 Msa0096940:intron 45.0%
TGTGCAACAGCAACATAGAG+AGG + chr1_3:2680123-2680142 None:intergenic 45.0%
TTTCCCACCAAAATTGGCAC+CGG - chr1_3:2680556-2680575 Msa0096940:CDS 45.0%
AGTCTCACAGTATGCAAACC+CGG + chr1_3:2680653-2680672 None:intergenic 45.0%
GGTCTATGATATGTTTGCGG+AGG - chr1_3:2681102-2681121 Msa0096940:CDS 45.0%
GTTTGCGGAGGGTTATTTGT+AGG - chr1_3:2681114-2681133 Msa0096940:CDS 45.0%
GGAACAAAGTAGCTTGGCAT+AGG + chr1_3:2681703-2681722 None:intergenic 45.0%
! GCCAAGCTACTTTGTTCCAA+TGG - chr1_3:2681705-2681724 Msa0096940:intron 45.0%
CTTTGTTCCAATGGTTCAGC+AGG - chr1_3:2681714-2681733 Msa0096940:intron 45.0%
TAGCGATAAACACGTTGCCT+TGG + chr1_3:2681921-2681940 None:intergenic 45.0%
! TCCACCAATGTTTTGCACAG+GGG + chr1_3:2681973-2681992 None:intergenic 45.0%
! CTCCACCAATGTTTTGCACA+GGG + chr1_3:2681974-2681993 None:intergenic 45.0%
ATGATGTCCTATGACATGGG+AGG - chr1_3:2681996-2682015 Msa0096940:intron 45.0%
GCTGTAGCCAAAGCATGAAT+GGG + chr1_3:2682053-2682072 None:intergenic 45.0%
TGCTGTAGCCAAAGCATGAA+TGG + chr1_3:2682054-2682073 None:intergenic 45.0%
TTACAGTCCTCTGCTGTTCA+GGG + chr1_3:2682091-2682110 None:intergenic 45.0%
GTATGGTTAGATGCTTGGAG+AGG - chr1_3:2682218-2682237 Msa0096940:intron 45.0%
TGTTCCAGCTGATCTACTAG+CGG + chr1_3:2682252-2682271 None:intergenic 45.0%
GGAACATGATTCAGCAGCTA+AGG - chr1_3:2682266-2682285 Msa0096940:intron 45.0%
GATTCAGCAGCTAAGGTTAC+CGG - chr1_3:2682273-2682292 Msa0096940:intron 45.0%
!! ACTTTAGCCTTGAGAGCATC+TGG + chr1_3:2682348-2682367 None:intergenic 45.0%
TAAAGTTGCTGAAGCCATGG+AGG - chr1_3:2682362-2682381 Msa0096940:CDS 45.0%
! TGGGGGGGTATAGAAATGAT+GGG + chr1_3:2682494-2682513 None:intergenic 45.0%
AAAAAAAAAACGGGGGGTGG+GGG + chr1_3:2682511-2682530 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAAAAAC+GGG + chr1_3:2682520-2682539 None:intergenic 5.0%
!! CAAAAAAAAAAAAAAAAAAA+CGG + chr1_3:2682521-2682540 None:intergenic 5.0%
!!! GTTTTTATTTATTTTTTATT+TGG - chr1_3:2682604-2682623 Msa0096940:five_prime_UTR 5.0%
CGGAACGGGAATAGTATCAG+CGG + chr1_3:2677646-2677665 None:intergenic 50.0%
ACTATTCCCGTTCCGATCAC+CGG - chr1_3:2677651-2677670 Msa0096940:three_prime_UTR 50.0%
!! CCGTTTGAAGGTGCTGGAAT+CGG + chr1_3:2677832-2677851 None:intergenic 50.0%
CCGATTCCAGCACCTTCAAA+CGG - chr1_3:2677829-2677848 Msa0096940:three_prime_UTR 50.0%
GTTACGACGTCGTTGTACGT+TGG - chr1_3:2677880-2677899 Msa0096940:CDS 50.0%
ACTCGTCGTTCGCTTGGTTA+TGG - chr1_3:2677997-2678016 Msa0096940:CDS 50.0%
TTATTCAGCGGCTAGGGCTT+TGG - chr1_3:2678160-2678179 Msa0096940:intron 50.0%
GATCCTAGTAGTCGCAAGAG+CGG - chr1_3:2678242-2678261 Msa0096940:CDS 50.0%
GAACGTGAGCAAGAGCTGAA+AGG - chr1_3:2679648-2679667 Msa0096940:intron 50.0%
GTGAGCAAGAGCTGAAAGGA+AGG - chr1_3:2679652-2679671 Msa0096940:intron 50.0%
GATCCTCTGCTGACACCATT+TGG + chr1_3:2679930-2679949 None:intergenic 50.0%
! AATGGTGTCAGCAGAGGATC+TGG - chr1_3:2679930-2679949 Msa0096940:intron 50.0%
ACAGCTCTTGATGCTTCCTC+TGG + chr1_3:2679975-2679994 None:intergenic 50.0%
! TGTTGCTGTTGCACAGCGAA+AGG - chr1_3:2680128-2680147 Msa0096940:intron 50.0%
TGTCGTTGTGTCCCTCTTGT+TGG - chr1_3:2680479-2680498 Msa0096940:intron 50.0%
TTCCCACCAAAATTGGCACC+GGG - chr1_3:2680557-2680576 Msa0096940:CDS 50.0%
CTTGGAGTGTGCTCCTTTCA+AGG + chr1_3:2680599-2680618 None:intergenic 50.0%
CACAGTATGCAAACCCGGTT+GGG + chr1_3:2680648-2680667 None:intergenic 50.0%
TCACAGTATGCAAACCCGGT+TGG + chr1_3:2680649-2680668 None:intergenic 50.0%
TTCGAACGCCTCACTTGCAA+GGG + chr1_3:2680682-2680701 None:intergenic 50.0%
!! TTGTGGAGGCATCATAGCTG+GGG + chr1_3:2681292-2681311 None:intergenic 50.0%
!! CTTGTGGAGGCATCATAGCT+GGG + chr1_3:2681293-2681312 None:intergenic 50.0%
!! ACTTGTGGAGGCATCATAGC+TGG + chr1_3:2681294-2681313 None:intergenic 50.0%
! TATCAGCAGCAGCTTGTTCC+TGG - chr1_3:2681658-2681677 Msa0096940:intron 50.0%
! ATCAGCAGCAGCTTGTTCCT+GGG - chr1_3:2681659-2681678 Msa0096940:intron 50.0%
!! ATCATTGGCACTTGCTGTGG+GGG + chr1_3:2681790-2681809 None:intergenic 50.0%
!! CATCATTGGCACTTGCTGTG+GGG + chr1_3:2681791-2681810 None:intergenic 50.0%
!! GCATCATTGGCACTTGCTGT+GGG + chr1_3:2681792-2681811 None:intergenic 50.0%
! TGCATCATTGGCACTTGCTG+TGG + chr1_3:2681793-2681812 None:intergenic 50.0%
TCTTGAATGTTGCTGCGACC+AGG + chr1_3:2681948-2681967 None:intergenic 50.0%
GATGCCCCTGTGCAAAACAT+TGG - chr1_3:2681966-2681985 Msa0096940:intron 50.0%
! CCTCCACCAATGTTTTGCAC+AGG + chr1_3:2681975-2681994 None:intergenic 50.0%
CCTGTGCAAAACATTGGTGG+AGG - chr1_3:2681972-2681991 Msa0096940:intron 50.0%
TGGCAAACCTCCCATGTCAT+AGG + chr1_3:2682006-2682025 None:intergenic 50.0%
GGTGGTACAACATCACGAAG+TGG + chr1_3:2682026-2682045 None:intergenic 50.0%
AAAGCATGAATGGGCATGGG+TGG + chr1_3:2682044-2682063 None:intergenic 50.0%
ACCCATGCCCATTCATGCTT+TGG - chr1_3:2682043-2682062 Msa0096940:intron 50.0%
GCCAAAGCATGAATGGGCAT+GGG + chr1_3:2682047-2682066 None:intergenic 50.0%
AGCCAAAGCATGAATGGGCA+TGG + chr1_3:2682048-2682067 None:intergenic 50.0%
TACAGTCCTCTGCTGTTCAG+GGG + chr1_3:2682090-2682109 None:intergenic 50.0%
CTTACAGTCCTCTGCTGTTC+AGG + chr1_3:2682092-2682111 None:intergenic 50.0%
GTATCCGCTAGTAGATCAGC+TGG - chr1_3:2682245-2682264 Msa0096940:intron 50.0%
TAAGGTTACCGGCATGCTTC+TGG - chr1_3:2682284-2682303 Msa0096940:CDS 50.0%
TGAGTCACCAGATGCTCTCA+AGG - chr1_3:2682338-2682357 Msa0096940:CDS 50.0%
GGCTAAAGTTGCTGAAGCCA+TGG - chr1_3:2682359-2682378 Msa0096940:CDS 50.0%
TCAACAGCAAGGAAACAGCC+CGG - chr1_3:2682401-2682420 Msa0096940:CDS 50.0%
AGAGTCGTTGAGAGAGAGTG+AGG + chr1_3:2682439-2682458 None:intergenic 50.0%
! GGGGGTATAGAAATGATGGG+TGG + chr1_3:2682491-2682510 None:intergenic 50.0%
! GTGGGGGGGTATAGAAATGA+TGG + chr1_3:2682495-2682514 None:intergenic 50.0%
AAAAAAAAACGGGGGGTGGG+GGG + chr1_3:2682510-2682529 None:intergenic 50.0%
!! GGTTTTTGGGAGGGCAGAGA+AGG + chr1_3:2677605-2677624 None:intergenic 55.0%
TGGATAAACCCGCCGGTGAT+CGG + chr1_3:2677666-2677685 None:intergenic 55.0%
! GAAACGACGCTGCCGTTTGA+AGG + chr1_3:2677844-2677863 None:intergenic 55.0%
TTGGCTACTCGTCGTTCGCT+TGG - chr1_3:2677991-2678010 Msa0096940:CDS 55.0%
! GACCCAAATGGTGTCAGCAG+AGG - chr1_3:2679924-2679943 Msa0096940:intron 55.0%
CGTTGTGTCCCTCTTGTTGG+TGG - chr1_3:2680482-2680501 Msa0096940:intron 55.0%
! TGTGTCCCTCTTGTTGGTGG+AGG - chr1_3:2680485-2680504 Msa0096940:intron 55.0%
AGGTGCCTCCACCAACAAGA+GGG + chr1_3:2680493-2680512 None:intergenic 55.0%
! AAGGTGCCTCCACCAACAAG+AGG + chr1_3:2680494-2680513 None:intergenic 55.0%
TCCCACCAAAATTGGCACCG+GGG - chr1_3:2680558-2680577 Msa0096940:CDS 55.0%
!! TCCCCGGTGCCAATTTTGGT+GGG + chr1_3:2680562-2680581 None:intergenic 55.0%
!! ACTCTCCCCGGTGCCAATTT+TGG + chr1_3:2680566-2680585 None:intergenic 55.0%
GGTCCAAATTCGACTCTCCC+CGG + chr1_3:2680578-2680597 None:intergenic 55.0%
CTTCGAACGCCTCACTTGCA+AGG + chr1_3:2680683-2680702 None:intergenic 55.0%
! TGAGGCGTTCGAAGTATGCG+AGG - chr1_3:2680689-2680708 Msa0096940:CDS 55.0%
AGGAGGGTAGAGTGGCATTC+GGG + chr1_3:2681226-2681245 None:intergenic 55.0%
CAGGAGGGTAGAGTGGCATT+CGG + chr1_3:2681227-2681246 None:intergenic 55.0%
!! CAAGACCAGGAGTACCAGGA+GGG + chr1_3:2681242-2681261 None:intergenic 55.0%
!! TGTCCAAGACCAGGAGTACC+AGG + chr1_3:2681246-2681265 None:intergenic 55.0%
!! TGTGGAGGCATCATAGCTGG+GGG + chr1_3:2681291-2681310 None:intergenic 55.0%
CTTGTTCCTGGGATGAGACC+TGG - chr1_3:2681670-2681689 Msa0096940:intron 55.0%
TGTTGGCCCTGCTGAACCAT+TGG + chr1_3:2681724-2681743 None:intergenic 55.0%
ATGGTTCAGCAGGGCCAACA+AGG - chr1_3:2681724-2681743 Msa0096940:intron 55.0%
GTTGTTGACCAGGACCTCCT+CGG + chr1_3:2681768-2681787 None:intergenic 55.0%
AGTGCCAATGATGCAGCAGC+AGG - chr1_3:2681798-2681817 Msa0096940:intron 55.0%
CAGACCTGCTGCTGCATCAT+TGG + chr1_3:2681805-2681824 None:intergenic 55.0%
CGTGTTTATCGCTACCCTCC+TGG - chr1_3:2681927-2681946 Msa0096940:intron 55.0%
GAATGTTGCTGCGACCAGGA+GGG + chr1_3:2681944-2681963 None:intergenic 55.0%
TGAATGTTGCTGCGACCAGG+AGG + chr1_3:2681945-2681964 None:intergenic 55.0%
GCCCCTGTGCAAAACATTGG+TGG - chr1_3:2681969-2681988 Msa0096940:intron 55.0%
ACAGTCCTCTGCTGTTCAGG+GGG + chr1_3:2682089-2682108 None:intergenic 55.0%
! TACCGGCATGCTTCTGGAGA+TGG - chr1_3:2682290-2682309 Msa0096940:CDS 55.0%
! GTCCATCTCCAGAAGCATGC+CGG + chr1_3:2682295-2682314 None:intergenic 55.0%
! AGTGAGGCTAGTTGATCCGC+CGG + chr1_3:2682423-2682442 None:intergenic 55.0%
AAAAAAAACGGGGGGTGGGG+GGG + chr1_3:2682509-2682528 None:intergenic 55.0%
AAGGCTGCACTGCACCGCAA+TGG + chr1_3:2677586-2677605 None:intergenic 60.0%
ATTCCCGTTCCGATCACCGG+CGG - chr1_3:2677654-2677673 Msa0096940:three_prime_UTR 60.0%
AAACCCGCCGGTGATCGGAA+CGG + chr1_3:2677661-2677680 None:intergenic 60.0%
!! GAAGGTGCTGGAATCGGTGC+CGG + chr1_3:2677826-2677845 None:intergenic 60.0%
! ACGCTGCCGTTTGAAGGTGC+TGG + chr1_3:2677838-2677857 None:intergenic 60.0%
! GTGCCGCTCTTGCGACTACT+AGG + chr1_3:2678248-2678267 None:intergenic 60.0%
!! CTCCCCGGTGCCAATTTTGG+TGG + chr1_3:2680563-2680582 None:intergenic 60.0%
GCACCGGGGAGAGTCGAATT+TGG - chr1_3:2680572-2680591 Msa0096940:CDS 60.0%
!! GAGGTGTTGGCTTGGGAGCT+TGG + chr1_3:2680617-2680636 None:intergenic 60.0%
!! TCGCCTGGAGGTGTTGGCTT+GGG + chr1_3:2680624-2680643 None:intergenic 60.0%
!! TTCGCCTGGAGGTGTTGGCT+TGG + chr1_3:2680625-2680644 None:intergenic 60.0%
! TTGGGTTCGCCTGGAGGTGT+TGG + chr1_3:2680630-2680649 None:intergenic 60.0%
GGAGGGTAGAGTGGCATTCG+GGG + chr1_3:2681225-2681244 None:intergenic 60.0%
CGAATGCCACTCTACCCTCC+TGG - chr1_3:2681225-2681244 Msa0096940:intron 60.0%
! GGAGTACCAGGAGGGTAGAG+TGG + chr1_3:2681234-2681253 None:intergenic 60.0%
CTCTACCCTCCTGGTACTCC+TGG - chr1_3:2681234-2681253 Msa0096940:intron 60.0%
!! CCAAGACCAGGAGTACCAGG+AGG + chr1_3:2681243-2681262 None:intergenic 60.0%
CCTCCTGGTACTCCTGGTCT+TGG - chr1_3:2681240-2681259 Msa0096940:intron 60.0%
GCATCATAGCTGGGGGTCCT+TGG + chr1_3:2681284-2681303 None:intergenic 60.0%
GTTCCTGGGATGAGACCTGG+TGG - chr1_3:2681673-2681692 Msa0096940:intron 60.0%
CTTGGCATAGGACCACCACC+AGG + chr1_3:2681691-2681710 None:intergenic 60.0%
TGCTGTGGGGGTTGTTGACC+AGG + chr1_3:2681778-2681797 None:intergenic 60.0%
ATGCTCCCCCTGAACAGCAG+AGG - chr1_3:2682081-2682100 Msa0096940:CDS 60.0%
ACAGCAAGGAAACAGCCCGG+CGG - chr1_3:2682404-2682423 Msa0096940:CDS 60.0%
! GTGAGGCTAGTTGATCCGCC+GGG + chr1_3:2682422-2682441 None:intergenic 60.0%
TTCCCGTTCCGATCACCGGC+GGG - chr1_3:2677655-2677674 Msa0096940:three_prime_UTR 65.0%
AACCCGCCGGTGATCGGAAC+GGG + chr1_3:2677660-2677679 None:intergenic 65.0%
GCTCCCAAGCCAACACCTCC+AGG - chr1_3:2680618-2680637 Msa0096940:CDS 65.0%
CACCTCCAGGCGAACCCAAC+CGG - chr1_3:2680631-2680650 Msa0096940:CDS 65.0%
ACCTCCAGGCGAACCCAACC+GGG - chr1_3:2680632-2680651 Msa0096940:CDS 65.0%
CAAACCCGGTTGGGTTCGCC+TGG + chr1_3:2680639-2680658 None:intergenic 65.0%
GGCATTCGGGGCGCAACAGA+AGG + chr1_3:2681213-2681232 None:intergenic 65.0%
CCACCACCAGGTCTCATCCC+AGG + chr1_3:2681679-2681698 None:intergenic 65.0%
CCTGGGATGAGACCTGGTGG+TGG - chr1_3:2681676-2681695 Msa0096940:intron 65.0%
!! CACCAGGGCGCTGACCTTGT+TGG + chr1_3:2681741-2681760 None:intergenic 65.0%
CAACAAGGTCAGCGCCCTGG+TGG - chr1_3:2681739-2681758 Msa0096940:intron 65.0%
ACCCGGTTGGGTTCGCCTGG+AGG + chr1_3:2680636-2680655 None:intergenic 70.0%
GGCCAACAAGGTCAGCGCCC+TGG - chr1_3:2681736-2681755 Msa0096940:intron 70.0%
GACCTCCTCGGCGTCCACCA+GGG + chr1_3:2681756-2681775 None:intergenic 70.0%
GGACCTCCTCGGCGTCCACC+AGG + chr1_3:2681757-2681776 None:intergenic 75.0%
GGTGGACGCCGAGGAGGTCC+TGG - chr1_3:2681757-2681776 Msa0096940:intron 75.0%
!! CAGCGCCCTGGTGGACGCCG+AGG - chr1_3:2681748-2681767 Msa0096940:intron 80.0%
!! CGCCCTGGTGGACGCCGAGG+AGG - chr1_3:2681751-2681770 Msa0096940:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 2677529 2682803 2677529 ID=Msa0096940;Name=Msa0096940
chr1_3 mRNA 2677529 2682803 2677529 ID=Msa0096940-mRNA-1;Parent=Msa0096940;Name=Msa0096940-mRNA-1;_AED=0.06;_eAED=0.06;_QI=264|1|1|1|1|1|9|342|647
chr1_3 exon 2677529 2678104 2677529 ID=Msa0096940-mRNA-1:exon:718;Parent=Msa0096940-mRNA-1
chr1_3 exon 2678226 2678420 2678226 ID=Msa0096940-mRNA-1:exon:717;Parent=Msa0096940-mRNA-1
chr1_3 exon 2678513 2678686 2678513 ID=Msa0096940-mRNA-1:exon:716;Parent=Msa0096940-mRNA-1
chr1_3 exon 2679021 2679158 2679021 ID=Msa0096940-mRNA-1:exon:715;Parent=Msa0096940-mRNA-1
chr1_3 exon 2680159 2680248 2680159 ID=Msa0096940-mRNA-1:exon:714;Parent=Msa0096940-mRNA-1
chr1_3 exon 2680340 2680417 2680340 ID=Msa0096940-mRNA-1:exon:713;Parent=Msa0096940-mRNA-1
chr1_3 exon 2680520 2681179 2680520 ID=Msa0096940-mRNA-1:exon:712;Parent=Msa0096940-mRNA-1
chr1_3 exon 2682046 2682164 2682046 ID=Msa0096940-mRNA-1:exon:711;Parent=Msa0096940-mRNA-1
chr1_3 exon 2682284 2682803 2682284 ID=Msa0096940-mRNA-1:exon:710;Parent=Msa0096940-mRNA-1
chr1_3 five_prime_UTR 2682540 2682803 2682540 ID=Msa0096940-mRNA-1:five_prime_utr;Parent=Msa0096940-mRNA-1
chr1_3 CDS 2682284 2682539 2682284 ID=Msa0096940-mRNA-1:cds;Parent=Msa0096940-mRNA-1
chr1_3 CDS 2682046 2682164 2682046 ID=Msa0096940-mRNA-1:cds;Parent=Msa0096940-mRNA-1
chr1_3 CDS 2680520 2681179 2680520 ID=Msa0096940-mRNA-1:cds;Parent=Msa0096940-mRNA-1
chr1_3 CDS 2680340 2680417 2680340 ID=Msa0096940-mRNA-1:cds;Parent=Msa0096940-mRNA-1
chr1_3 CDS 2680159 2680248 2680159 ID=Msa0096940-mRNA-1:cds;Parent=Msa0096940-mRNA-1
chr1_3 CDS 2679021 2679158 2679021 ID=Msa0096940-mRNA-1:cds;Parent=Msa0096940-mRNA-1
chr1_3 CDS 2678513 2678686 2678513 ID=Msa0096940-mRNA-1:cds;Parent=Msa0096940-mRNA-1
chr1_3 CDS 2678226 2678420 2678226 ID=Msa0096940-mRNA-1:cds;Parent=Msa0096940-mRNA-1
chr1_3 CDS 2677871 2678104 2677871 ID=Msa0096940-mRNA-1:cds;Parent=Msa0096940-mRNA-1
chr1_3 three_prime_UTR 2677529 2677870 2677529 ID=Msa0096940-mRNA-1:three_prime_utr;Parent=Msa0096940-mRNA-1
Gene Sequence

>Msa0096940

ATGGCGCAGATTCAGGTTCAGCATCAAATTCCGGCACCGATTCCAGCACCTTCAAACGGCAGCGTCGTTTCGACACCGAATCAGTTCGTTACGACGTCGTTGTACGTTGGTGATCTTGAGGTGAATGTGAACGATTCTCAGCTTTACGATCACTTTAATCAAGTTGGACAAGTGGTTTCGGTTAGGGTTTGTAGGGATTTGGCTACTCGTCGTTCGCTTGGTTATGGTTATGTTAATTTCACTAACCCTCAGGATGCGGCTAGGGCTTTGGATGTTCTGAATTTTACTCCTCTGAACAACAAATCTATTAGGGTTATGTATTCTCATCGTGATCCTAGTAGTCGCAAGAGCGGCACTGCTAATATTTTTATCAAGAATTTGGATAAGACGATTGATCACAAAGCTTTACATGACACTTTTTCTTCTTTCGGACAAATTATGTCTTGCAAAATAGCAACTGATGGTTCTGGTCAGTCTAAAGGCTATGGTTTTGTCCAATTTGAGGCTGAGGATTCTGCTCAGAATGCAATTGATAAGTTAAATGGAATGTTGATCAATGACAAGCAGGTGTTTGTGGGTCATTTCCTACGTAAGCAAGATAGAGATAACGTTCTCAGTAAGACAAAATTTAACAATGTCTATGTGAAAAACCTATCAGAGTCATTTACGGAAGATGACTTGAAAAATGAATTTGGAGCTTATGGGACCATTACTAGTGCTGTTTTGATGAGAGATGCTGATGGTAGGTCGAAATGTTTTGGATTTGTCAATTTCGAAAATGCAGAAGATGCTGCTAAAGCTGTTGAGGCATTGAATGGTAAAAAAGTTGATGACAAGGAGTGGTATGTTGGTAAAGCTCAGAAAAAATCTGAACGTGAGCAAGAGCTGAAAGGAAGGTTTGAGCAGACTGTAAAGGAGTCTGTAGTAGACAAATTTCAAGGTCTGAACTTGTATCTCAAAAACTTGGATGATTCCATTACTGATGAAAAACTCAAGGAAATGTTCTCTGAGTTTGGCACAATTACTTCGTACAAGATTATGCGAGACCCAAATGGTGTCAGCAGAGGATCTGGCTTTGTTGCATTTTCAACTCCAGAGGAAGCATCAAGAGCTCTTGGAGAGATGAATGGCAAAATGATCGTTAGCAAACCTCTCTATGTTGCTGTTGCACAGCGAAAGGAAGATAGAAGAGCAAGATTGCAGGCACAATTTTCACAAATGAGGCCTGTTGCAATTACACCTTCTGTTGCGCCCCGAATGCCACTCTACCCTCCTGGTACTCCTGGTCTTGGACAACAATTTATGTATGGCCAAGGACCCCCAGCTATGATGCCTCCACAAGCTGGATTTGGATATCAGCAGCAGCTTGTTCCTGGGATGAGACCTGGTGGTGGTCCTATGCCAAGCTACTTTGTTCCAATGGTTCAGCAGGGCCAACAAGGTCAGCGCCCTGGTGGACGCCGAGGAGGTCCTGGTCAACAACCCCCACAGCAAGTGCCAATGATGCAGCAGCAGATGCTTCCAAGGCAACGTGTTTATCGCTACCCTCCTGGTCGCAGCAACATTCAAGATGCCCCTGTGCAAAACATTGGTGGAGGAATGATGTCCTATGACATGGGAGGTTTGCCACTTCGTGATGTTGTACCACCCATGCCCATTCATGCTTTGGCTACAGCACTTGCGAATGCTCCCCCTGAACAGCAGAGGACTATGCTTGGAGAGGCTTTGTATCCGCTAGTAGATCAGCTGGAACATGATTCAGCAGCTAAGGTTACCGGCATGCTTCTGGAGATGGACCAGCCTGAAGTATTGCATTTGATTGAGTCACCAGATGCTCTCAAGGCTAAAGTTGCTGAAGCCATGGAGGTTTTGAGAAATGTTACTCAACAGCAAGGAAACAGCCCGGCGGATCAACTAGCCTCACTCTCTCTCAACGACTCTTAG
Protein sequence

>Msa0096940

MAQIQVQHQIPAPIPAPSNGSVVSTPNQFVTTSLYVGDLEVNVNDSQLYDHFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALDVLNFTPLNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAVAQRKEDRRARLQAQFSQMRPVAITPSVAPRMPLYPPGTPGLGQQFMYGQGPPAMMPPQAGFGYQQQLVPGMRPGGGPMPSYFVPMVQQGQQGQRPGGRRGGPGQQPPQQVPMMQQQMLPRQRVYRYPPGRSNIQDAPVQNIGGGMMSYDMGGLPLRDVVPPMPIHALATALANAPPEQQRTMLGEALYPLVDQLEHDSAAKVTGMLLEMDQPEVLHLIESPDALKAKVAEAMEVLRNVTQQQGNSPADQLASLSLNDS*