Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133980 | XP_003592315.2 | 98.283 | 233 | 1 | 1 | 1 | 230 | 156 | 388 | 3.40e-150 | 433 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133980 | G7IAR3 | 98.283 | 233 | 1 | 1 | 1 | 230 | 156 | 388 | 1.62e-150 | 433 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0133980 | 0.828395 | 9.206382e-55 | -8.615850e-47 |
| Msa0014710 | Msa0133980 | -0.800656 | 1.301063e-48 | -8.615850e-47 |
| Msa0017510 | Msa0133980 | -0.801687 | 8.005148e-49 | -8.615850e-47 |
| Msa0022310 | Msa0133980 | -0.802315 | 5.945761e-49 | -8.615850e-47 |
| Msa0036920 | Msa0133980 | -0.810375 | 1.189374e-50 | -8.615850e-47 |
| Msa0090280 | Msa0133980 | 0.811086 | 8.344836e-51 | -8.615850e-47 |
| Msa0101810 | Msa0133980 | 0.874687 | 5.560323e-68 | -8.615850e-47 |
| Msa0105070 | Msa0133980 | -0.806833 | 6.789882e-50 | -8.615850e-47 |
| Msa0122580 | Msa0133980 | -0.801447 | 8.966336e-49 | -8.615850e-47 |
| Msa0130970 | Msa0133980 | -0.806634 | 7.477526e-50 | -8.615850e-47 |
| Msa0133980 | Msa0157290 | -0.802322 | 5.927993e-49 | -8.615850e-47 |
| Msa0133980 | Msa0165210 | -0.802719 | 4.910118e-49 | -8.615850e-47 |
| Msa0133980 | Msa0171300 | -0.800419 | 1.454179e-48 | -8.615850e-47 |
| Msa0133980 | Msa0183010 | 0.802044 | 6.763104e-49 | -8.615850e-47 |
| Msa0133980 | Msa0191250 | -0.817097 | 3.934968e-52 | -8.615850e-47 |
| Msa0133980 | Msa0199800 | 0.810134 | 1.340288e-50 | -8.615850e-47 |
| Msa0133980 | Msa0215320 | 0.864061 | 1.594659e-64 | -8.615850e-47 |
| Msa0133980 | Msa0217400 | -0.804222 | 2.396518e-49 | -8.615850e-47 |
| Msa0133980 | Msa0220290 | 0.814579 | 1.433865e-51 | -8.615850e-47 |
| Msa0133980 | Msa0223410 | 0.848604 | 5.511998e-60 | -8.615850e-47 |
| Msa0133980 | Msa0230640 | 0.801619 | 8.266067e-49 | -8.615850e-47 |
| Msa0133980 | Msa0237310 | -0.802440 | 5.603909e-49 | -8.615850e-47 |
| Msa0133980 | Msa0264780 | -0.806212 | 9.177461e-50 | -8.615850e-47 |
| Msa0133980 | Msa0266000 | 0.837927 | 3.893909e-57 | -8.615850e-47 |
| Msa0133980 | Msa0269810 | -0.800889 | 1.165855e-48 | -8.615850e-47 |
| Msa0133980 | Msa0274670 | -0.802313 | 5.952408e-49 | -8.615850e-47 |
| Msa0133980 | Msa0274730 | -0.803474 | 3.426048e-49 | -8.615850e-47 |
| Msa0133980 | Msa0280570 | -0.809386 | 1.941814e-50 | -8.615850e-47 |
| Msa0133980 | Msa0284520 | -0.809836 | 1.554065e-50 | -8.615850e-47 |
| Msa0133980 | Msa0285450 | -0.802984 | 4.327174e-49 | -8.615850e-47 |
| Msa0133980 | Msa0302580 | 0.800644 | 1.308181e-48 | -8.615850e-47 |
| Msa0133980 | Msa0306210 | 0.809943 | 1.473776e-50 | -8.615850e-47 |
| Msa0133980 | Msa0323080 | -0.823879 | 1.092165e-53 | -8.615850e-47 |
| Msa0133980 | Msa0335040 | -0.815388 | 9.484385e-52 | -8.615850e-47 |
| Msa0133980 | Msa0340450 | -0.815494 | 8.982438e-52 | -8.615850e-47 |
| Msa0133980 | Msa0344690 | 0.831326 | 1.778641e-55 | -8.615850e-47 |
| Msa0133980 | Msa0350870 | -0.832913 | 7.205943e-56 | -8.615850e-47 |
| Msa0133980 | Msa0350990 | -0.806149 | 9.464107e-50 | -8.615850e-47 |
| Msa0133980 | Msa0351030 | -0.813665 | 2.282034e-51 | -8.615850e-47 |
| Msa0133980 | Msa0354800 | 0.874818 | 5.018023e-68 | -8.615850e-47 |
| Msa0133980 | Msa0356890 | 0.825901 | 3.639467e-54 | -8.615850e-47 |
| Msa0133980 | Msa0365490 | -0.828671 | 7.896023e-55 | -8.615850e-47 |
| Msa0133980 | Msa0376590 | -0.822187 | 2.709009e-53 | -8.615850e-47 |
| Msa0133980 | Msa0381600 | 0.816074 | 6.669981e-52 | -8.615850e-47 |
| Msa0133980 | Msa0388030 | 0.807940 | 3.953398e-50 | -8.615850e-47 |
| Msa0133980 | Msa0388960 | -0.836147 | 1.109441e-56 | -8.615850e-47 |
| Msa0133980 | Msa0392040 | 0.810444 | 1.149120e-50 | -8.615850e-47 |
| Msa0133980 | Msa0395770 | 0.818870 | 1.564142e-52 | -8.615850e-47 |
| Msa0133980 | Msa0395790 | -0.827705 | 1.350061e-54 | -8.615850e-47 |
| Msa0133980 | Msa0405880 | -0.816267 | 6.040338e-52 | -8.615850e-47 |
| Msa0133980 | Msa0422500 | -0.825418 | 4.739240e-54 | -8.615850e-47 |
| Msa0133980 | Msa0436280 | 0.804377 | 2.223935e-49 | -8.615850e-47 |
| Msa0133980 | Msa0436370 | -0.832153 | 1.111750e-55 | -8.615850e-47 |
| Msa0133980 | Msa0439970 | -0.802506 | 5.432423e-49 | -8.615850e-47 |
| Msa0133980 | Msa0443260 | -0.803861 | 2.848299e-49 | -8.615850e-47 |
| Msa0133980 | Msa0448550 | 0.835182 | 1.946874e-56 | -8.615850e-47 |
| Msa0133980 | Msa0450350 | -0.828613 | 8.155941e-55 | -8.615850e-47 |
| Msa0133980 | Msa0452810 | 0.830585 | 2.702701e-55 | -8.615850e-47 |
| Msa0133980 | Msa0458440 | -0.855394 | 6.498491e-62 | -8.615850e-47 |
| Msa0133980 | Msa0466390 | -0.845097 | 5.022546e-59 | -8.615850e-47 |
| Msa0133980 | Msa0469940 | 0.838864 | 2.232237e-57 | -8.615850e-47 |
| Msa0133980 | Msa0473240 | -0.820100 | 8.197486e-53 | -8.615850e-47 |
| Msa0133980 | Msa0479340 | -0.808461 | 3.061705e-50 | -8.615850e-47 |
| Msa0133980 | Msa0484780 | -0.815595 | 8.530385e-52 | -8.615850e-47 |
| Msa0133980 | Msa0490730 | 0.828265 | 9.894172e-55 | -8.615850e-47 |
| Msa0133980 | Msa0492880 | -0.826207 | 3.079047e-54 | -8.615850e-47 |
| Msa0133980 | Msa0495330 | -0.817483 | 3.221312e-52 | -8.615850e-47 |
| Msa0133980 | Msa0498220 | -0.825138 | 5.518762e-54 | -8.615850e-47 |
| Msa0133980 | Msa0511250 | -0.810964 | 8.869233e-51 | -8.615850e-47 |
| Msa0133980 | Msa0516370 | -0.822515 | 2.273176e-53 | -8.615850e-47 |
| Msa0133980 | Msa0524890 | 0.813745 | 2.190674e-51 | -8.615850e-47 |
| Msa0133980 | Msa0526100 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0133980 | Msa0542480 | -0.811575 | 6.536602e-51 | -8.615850e-47 |
| Msa0133980 | Msa0548280 | 0.811263 | 7.641565e-51 | -8.615850e-47 |
| Msa0133980 | Msa0558690 | -0.809154 | 2.177258e-50 | -8.615850e-47 |
| Msa0133980 | Msa0566500 | 0.815867 | 7.416993e-52 | -8.615850e-47 |
| Msa0133980 | Msa0567020 | -0.809957 | 1.463690e-50 | -8.615850e-47 |
| Msa0133980 | Msa0570640 | -0.803564 | 3.282754e-49 | -8.615850e-47 |
| Msa0133980 | Msa0572420 | -0.838014 | 3.698622e-57 | -8.615850e-47 |
| Msa0133980 | Msa0572480 | -0.825270 | 5.135435e-54 | -8.615850e-47 |
| Msa0133980 | Msa0574760 | 0.835340 | 1.776603e-56 | -8.615850e-47 |
| Msa0133980 | Msa0574890 | -0.800578 | 1.349671e-48 | -8.615850e-47 |
| Msa0133980 | Msa0581050 | -0.819269 | 1.269414e-52 | -8.615850e-47 |
| Msa0133980 | Msa0613460 | -0.837564 | 4.824997e-57 | -8.615850e-47 |
| Msa0133980 | Msa0623080 | -0.809083 | 2.254941e-50 | -8.615850e-47 |
| Msa0133980 | Msa0626280 | -0.838584 | 2.636367e-57 | -8.615850e-47 |
| Msa0133980 | Msa0626410 | -0.812027 | 5.211201e-51 | -8.615850e-47 |
| Msa0133980 | Msa0638930 | 0.801061 | 1.075335e-48 | -8.615850e-47 |
| Msa0133980 | Msa0648520 | -0.811958 | 5.395510e-51 | -8.615850e-47 |
| Msa0133980 | Msa0654930 | 0.802132 | 6.486592e-49 | -8.615850e-47 |
| Msa0133980 | Msa0657610 | -0.801044 | 1.084297e-48 | -8.615850e-47 |
| Msa0133980 | Msa0658570 | -0.839852 | 1.236214e-57 | -8.615850e-47 |
| Msa0133980 | Msa0664570 | -0.806574 | 7.700416e-50 | -8.615850e-47 |
| Msa0133980 | Msa0679290 | 0.830520 | 2.804305e-55 | -8.615850e-47 |
| Msa0133980 | Msa0682550 | -0.806867 | 6.678332e-50 | -8.615850e-47 |
| Msa0133980 | Msa0691050 | -0.835079 | 2.067233e-56 | -8.615850e-47 |
| Msa0133980 | Msa0701010 | -0.803006 | 4.281951e-49 | -8.615850e-47 |
| Msa0133980 | Msa0731940 | -0.828151 | 1.054076e-54 | -8.615850e-47 |
| Msa0133980 | Msa0735170 | -0.809930 | 1.482918e-50 | -8.615850e-47 |
| Msa0133980 | Msa0743680 | -0.816892 | 4.373987e-52 | -8.615850e-47 |
| Msa0133980 | Msa0744170 | 0.847293 | 1.267142e-59 | -8.615850e-47 |
| Msa0133980 | Msa0756630 | 0.814705 | 1.344690e-51 | -8.615850e-47 |
| Msa0133980 | Msa0757500 | 0.810026 | 1.414273e-50 | -8.615850e-47 |
| Msa0133980 | Msa0760130 | -0.804392 | 2.207966e-49 | -8.615850e-47 |
| Msa0133980 | Msa0768290 | -0.805188 | 1.506262e-49 | -8.615850e-47 |
| Msa0133980 | Msa0777570 | 0.804753 | 1.857092e-49 | -8.615850e-47 |
| Msa0133980 | Msa0787470 | -0.801664 | 8.092942e-49 | -8.615850e-47 |
| Msa0133980 | Msa0788070 | 0.806603 | 7.592847e-50 | -8.615850e-47 |
| Msa0133980 | Msa0794510 | 0.826831 | 2.186032e-54 | -8.615850e-47 |
| Msa0133980 | Msa0802470 | 0.848397 | 6.292713e-60 | -8.615850e-47 |
| Msa0133980 | Msa0810220 | -0.829089 | 6.257034e-55 | -8.615850e-47 |
| Msa0133980 | Msa0828540 | -0.823914 | 1.071561e-53 | -8.615850e-47 |
| Msa0133980 | Msa0829620 | -0.813174 | 2.925651e-51 | -8.615850e-47 |
| Msa0133980 | Msa0834880 | -0.803887 | 2.812980e-49 | -8.615850e-47 |
| Msa0133980 | Msa0838930 | -0.803937 | 2.746134e-49 | -8.615850e-47 |
| Msa0133980 | Msa0863800 | -0.817332 | 3.483410e-52 | -8.615850e-47 |
| Msa0133980 | Msa0867890 | -0.817036 | 4.059995e-52 | -8.615850e-47 |
| Msa0133980 | Msa0870530 | -0.849417 | 3.276750e-60 | -8.615850e-47 |
| Msa0133980 | Msa0877250 | -0.800451 | 1.432146e-48 | -8.615850e-47 |
| Msa0133980 | Msa0880140 | -0.804581 | 2.016504e-49 | -8.615850e-47 |
| Msa0133980 | Msa0891040 | -0.840295 | 9.476058e-58 | -8.615850e-47 |
| Msa0133980 | Msa0896220 | -0.804770 | 1.841747e-49 | -8.615850e-47 |
| Msa0133980 | Msa0903700 | -0.829127 | 6.124159e-55 | -8.615850e-47 |
| Msa0133980 | Msa0907070 | -0.834435 | 3.001830e-56 | -8.615850e-47 |
| Msa0133980 | Msa0908050 | -0.816500 | 5.355524e-52 | -8.615850e-47 |
| Msa0133980 | Msa0908770 | 0.806656 | 7.399191e-50 | -8.615850e-47 |
| Msa0133980 | Msa0930400 | 0.825292 | 5.075898e-54 | -8.615850e-47 |
| Msa0133980 | Msa0930910 | 0.819715 | 1.004060e-52 | -8.615850e-47 |
| Msa0133980 | Msa0936210 | -0.832931 | 7.133716e-56 | -8.615850e-47 |
| Msa0133980 | Msa0936300 | -0.820033 | 8.493623e-53 | -8.615850e-47 |
| Msa0133980 | Msa0949790 | -0.802641 | 5.094676e-49 | -8.615850e-47 |
| Msa0133980 | Msa0961420 | 0.804142 | 2.489791e-49 | -8.615850e-47 |
| Msa0133980 | Msa0964130 | -0.836988 | 6.775317e-57 | -8.615850e-47 |
| Msa0133980 | Msa0969520 | -0.821289 | 4.370244e-53 | -8.615850e-47 |
| Msa0133980 | Msa0973100 | -0.807766 | 4.306022e-50 | -8.615850e-47 |
| Msa0133980 | Msa0973150 | -0.800830 | 1.198657e-48 | -8.615850e-47 |
| Msa0133980 | Msa0990960 | -0.839346 | 1.673763e-57 | -8.615850e-47 |
| Msa0133980 | Msa0992350 | -0.800292 | 1.543076e-48 | -8.615850e-47 |
| Msa0133980 | Msa1007150 | 0.800324 | 1.520033e-48 | -8.615850e-47 |
| Msa0133980 | Msa1012590 | 0.820954 | 5.219254e-53 | -8.615850e-47 |
| Msa0133980 | Msa1015490 | -0.807418 | 5.104436e-50 | -8.615850e-47 |
| Msa0133980 | Msa1028270 | -0.809056 | 2.284543e-50 | -8.615850e-47 |
| Msa0133980 | Msa1030970 | -0.821295 | 4.357182e-53 | -8.615850e-47 |
| Msa0133980 | Msa1035310 | -0.817714 | 2.857064e-52 | -8.615850e-47 |
| Msa0133980 | Msa1037700 | 0.816777 | 4.643284e-52 | -8.615850e-47 |
| Msa0133980 | Msa1041600 | 0.819155 | 1.347557e-52 | -8.615850e-47 |
| Msa0133980 | Msa1046300 | -0.810728 | 9.978730e-51 | -8.615850e-47 |
| Msa0133980 | Msa1061020 | 0.814401 | 1.569794e-51 | -8.615850e-47 |
| Msa0133980 | Msa1061060 | 0.808323 | 3.277013e-50 | -8.615850e-47 |
| Msa0133980 | Msa1068200 | 0.847984 | 8.183563e-60 | -8.615850e-47 |
| Msa0133980 | Msa1073070 | 0.822598 | 2.174479e-53 | -8.615850e-47 |
| Msa0133980 | Msa1075080 | 0.821078 | 4.888646e-53 | -8.615850e-47 |
| Msa0133980 | Msa1075220 | 0.864537 | 1.132653e-64 | -8.615850e-47 |
| Msa0133980 | Msa1082500 | -0.806565 | 7.734727e-50 | -8.615850e-47 |
| Msa0133980 | Msa1082580 | -0.801384 | 9.237954e-49 | -8.615850e-47 |
| Msa0133980 | Msa1084260 | -0.830281 | 3.208834e-55 | -8.615850e-47 |
| Msa0133980 | Msa1085300 | -0.812549 | 4.009859e-51 | -8.615850e-47 |
| Msa0133980 | Msa1098270 | -0.803234 | 3.841710e-49 | -8.615850e-47 |
| Msa0133980 | Msa1116130 | 0.824187 | 9.244328e-54 | -8.615850e-47 |
| Msa0133980 | Msa1116440 | -0.824820 | 6.560308e-54 | -8.615850e-47 |
| Msa0133980 | Msa1121450 | 0.826844 | 2.170939e-54 | -8.615850e-47 |
| Msa0133980 | Msa1121490 | -0.829824 | 4.146209e-55 | -8.615850e-47 |
| Msa0133980 | Msa1130270 | 0.831876 | 1.301573e-55 | -8.615850e-47 |
| Msa0133980 | Msa1133220 | -0.820589 | 6.332570e-53 | -8.615850e-47 |
| Msa0133980 | Msa1137570 | -0.816319 | 5.879226e-52 | -8.615850e-47 |
| Msa0133980 | Msa1139000 | 0.833802 | 4.325700e-56 | -8.615850e-47 |
| Msa0133980 | Msa1144720 | 0.839050 | 1.997498e-57 | -8.615850e-47 |
| Msa0133980 | Msa1156340 | 0.847354 | 1.219637e-59 | -8.615850e-47 |
| Msa0133980 | Msa1158310 | -0.810302 | 1.233452e-50 | -8.615850e-47 |
| Msa0133980 | Msa1162550 | 0.863417 | 2.527091e-64 | -8.615850e-47 |
| Msa0133980 | Msa1164170 | 0.830362 | 3.064248e-55 | -8.615850e-47 |
| Msa0133980 | Msa1166500 | 0.822922 | 1.828129e-53 | -8.615850e-47 |
| Msa0133980 | Msa1186950 | 0.810996 | 8.731044e-51 | -8.615850e-47 |
| Msa0133980 | Msa1193290 | -0.800006 | 1.764454e-48 | -8.615850e-47 |
| Msa0133980 | Msa1211140 | 0.806071 | 9.826913e-50 | -8.615850e-47 |
| Msa0133980 | Msa1220150 | -0.803660 | 3.135304e-49 | -8.615850e-47 |
| Msa0133980 | Msa1229600 | -0.837783 | 4.239122e-57 | -8.615850e-47 |
| Msa0133980 | Msa1238930 | -0.822164 | 2.742249e-53 | -8.615850e-47 |
| Msa0133980 | Msa1239720 | -0.818060 | 2.386817e-52 | -8.615850e-47 |
| Msa0133980 | Msa1243100 | -0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa0133980 | Msa1244750 | 0.818841 | 1.588025e-52 | -8.615850e-47 |
| Msa0133980 | Msa1245830 | -0.800337 | 1.510967e-48 | -8.615850e-47 |
| Msa0133980 | Msa1263290 | 0.804778 | 1.834734e-49 | -8.615850e-47 |
| Msa0133980 | Msa1269580 | 0.800313 | 1.528131e-48 | -8.615850e-47 |
| Msa0133980 | Msa1282580 | 0.811427 | 7.041122e-51 | -8.615850e-47 |
| Msa0133980 | Msa1284680 | -0.807306 | 5.392146e-50 | -8.615850e-47 |
| Msa0133980 | Msa1299290 | 0.805835 | 1.102064e-49 | -8.615850e-47 |
| Msa0133980 | Msa1299490 | 0.811841 | 5.721922e-51 | -8.615850e-47 |
| Msa0133980 | Msa1306850 | -0.808773 | 2.626123e-50 | -8.615850e-47 |
| Msa0133980 | Msa1310210 | -0.821097 | 4.839903e-53 | -8.615850e-47 |
| Msa0133980 | Msa1313150 | -0.814724 | 1.331621e-51 | -8.615850e-47 |
| Msa0133980 | Msa1328290 | 0.814079 | 1.849292e-51 | -8.615850e-47 |
| Msa0133980 | Msa1332000 | -0.818011 | 2.448624e-52 | -8.615850e-47 |
| Msa0133980 | Msa1349740 | -0.806614 | 7.551130e-50 | -8.615850e-47 |
| Msa0133980 | Msa1350310 | -0.800624 | 1.320820e-48 | -8.615850e-47 |
| Msa0133980 | Msa1352540 | 0.844950 | 5.504468e-59 | -8.615850e-47 |
| Msa0133980 | Msa1353470 | -0.804412 | 2.187134e-49 | -8.615850e-47 |
| Msa0133980 | Msa1376890 | -0.840057 | 1.093736e-57 | -8.615850e-47 |
| Msa0133980 | Msa1376930 | -0.804093 | 2.549073e-49 | -8.615850e-47 |
| Msa0133980 | Msa1379850 | -0.832187 | 1.090426e-55 | -8.615850e-47 |
| Msa0133980 | Msa1390120 | -0.826304 | 2.919414e-54 | -8.615850e-47 |
| Msa0133980 | Msa1393040 | -0.812172 | 4.845696e-51 | -8.615850e-47 |
| Msa0133980 | Msa1393410 | -0.843150 | 1.672600e-58 | -8.615850e-47 |
| Msa0133980 | Msa1395530 | -0.831672 | 1.461426e-55 | -8.615850e-47 |
| Msa0133980 | Msa1401530 | -0.802477 | 5.507624e-49 | -8.615850e-47 |
| Msa0133980 | Msa1408620 | 0.843665 | 1.218616e-58 | -8.615850e-47 |
| Msa0133980 | Msa1423880 | -0.843847 | 1.088909e-58 | -8.615850e-47 |
| Msa0133980 | Msa1424680 | -0.802230 | 6.191941e-49 | -8.615850e-47 |
| Msa0133980 | Msa1429360 | 0.806964 | 6.368347e-50 | -8.615850e-47 |
| Msa0133980 | Msa1435420 | -0.842741 | 2.148234e-58 | -8.615850e-47 |
| Msa0133980 | Msa1451620 | 0.861001 | 1.393568e-63 | -8.615850e-47 |
| Msa0133980 | Msa1459050 | -0.817089 | 3.950912e-52 | -8.615850e-47 |
| Msa0133980 | Msa1461810 | 0.818899 | 1.540615e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133980 | MtrunA17_Chr1g0203801 | 98.283 | 233 | 1 | 1 | 1 | 230 | 115 | 347 | 4.37e-154 | 431 |
| Msa0133980 | MtrunA17_Chr8g0350691 | 58.824 | 85 | 23 | 5 | 1 | 73 | 156 | 240 | 3.01e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 128 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCATTCATGGGACTTTC+AGG | 0.173308 | 1_3:-65378379 | None:intergenic |
| CTGGGTTCCGGCATAGTATT+TGG | 0.180328 | 1_3:-65378334 | None:intergenic |
| ATACAATCTGTTGGCCCTTC+AGG | 0.256519 | 1_3:-65378577 | None:intergenic |
| TCTCTCCTTCTTCAAGACTA+TGG | 0.275407 | 1_3:-65378117 | None:intergenic |
| CCCAGCCCATACAATGATTA+TGG | 0.294464 | 1_3:+65378304 | Msa0133980:CDS |
| CTGCTCCTCTCCCTCTTATA+TGG | 0.297772 | 1_3:-65377920 | None:intergenic |
| TGACGATCACGGCCTCTATC+TGG | 0.301692 | 1_3:-65377812 | None:intergenic |
| GAGAGGAGCAGCCCTGACTA+TGG | 0.307131 | 1_3:+65377932 | Msa0133980:CDS |
| CTGTTGCCACGCCCATAGTC+AGG | 0.331693 | 1_3:-65377944 | None:intergenic |
| TCCATAATCATTGTATGGGC+TGG | 0.335682 | 1_3:-65378305 | None:intergenic |
| GTGTGCCCTTGAAGCATTCT+AGG | 0.336354 | 1_3:+65378802 | Msa0133980:three_prime_UTR |
| GAGCGAGGTAGTCCTGCTTA+TGG | 0.344006 | 1_3:+65377992 | Msa0133980:CDS |
| ACCATAGTTGGGACTGTCCC+TGG | 0.347262 | 1_3:-65378353 | None:intergenic |
| CTCCCTCCATAATCATTGTA+TGG | 0.347595 | 1_3:-65378310 | None:intergenic |
| CAATTCAGGGACTTATTTGA+TGG | 0.350309 | 1_3:+65378888 | Msa0133980:three_prime_UTR |
| GGATCTGACCCTAGTCCTTA+TGG | 0.350954 | 1_3:+65378163 | Msa0133980:CDS |
| ACAACATTAAACTGAGAGTA+TGG | 0.352820 | 1_3:-65378711 | None:intergenic |
| CTCCGGTCATGGCCATTGTC+GGG | 0.356775 | 1_3:-65378202 | None:intergenic |
| TTGTATAACATGGTCGTTAC+AGG | 0.361047 | 1_3:+65378594 | Msa0133980:three_prime_UTR |
| GTCGACAAAGCTTCGAAACT+TGG | 0.361600 | 1_3:+65378653 | Msa0133980:three_prime_UTR |
| AGTGTAGGCATTCTACCTAT+TGG | 0.365755 | 1_3:+65378837 | Msa0133980:three_prime_UTR |
| CCATAATCATTGTATGGGCT+GGG | 0.366898 | 1_3:-65378304 | None:intergenic |
| CTCTCCCTTCTGTAAGGACT+AGG | 0.378725 | 1_3:-65378025 | None:intergenic |
| CAAGGGGCTAGACTCAATTC+AGG | 0.379544 | 1_3:+65378874 | Msa0133980:three_prime_UTR |
| TTGGGACTGTCCCTGGGTTC+CGG | 0.382762 | 1_3:-65378346 | None:intergenic |
| CACAAGTTCGATAATATTCA+TGG | 0.394000 | 1_3:-65378766 | None:intergenic |
| GACTACCTCGCTCCCTTCGA+TGG | 0.405895 | 1_3:-65377982 | None:intergenic |
| CCTGCGATATTGTTCATTCA+TGG | 0.410536 | 1_3:-65378389 | None:intergenic |
| TGGGTTCCGGCATAGTATTT+GGG | 0.421804 | 1_3:-65378333 | None:intergenic |
| GACTGAAATCATTCTTCTGC+AGG | 0.421919 | 1_3:-65378541 | None:intergenic |
| CCTCCGGTCATGGCCATTGT+CGG | 0.422616 | 1_3:-65378203 | None:intergenic |
| CTAGAACCATTGAATGGGCT+GGG | 0.423646 | 1_3:-65378250 | None:intergenic |
| GAGAGGATAGAACCTCAAAA+AGG | 0.431120 | 1_3:+65378136 | Msa0133980:CDS |
| GAAAGGGGTAGTCCTGATTA+TGG | 0.435611 | 1_3:+65377884 | Msa0133980:CDS |
| TTGCATCAGGACTACGCCTC+CGG | 0.436332 | 1_3:-65378219 | None:intergenic |
| CCCAGGGACAGTCCCAACTA+TGG | 0.445908 | 1_3:+65378352 | Msa0133980:CDS |
| ATAGATAGAGAAATAATTCA+AGG | 0.446812 | 1_3:+65378940 | Msa0133980:three_prime_UTR |
| CTAGGCCCACGACCATAATC+AGG | 0.449489 | 1_3:-65377896 | None:intergenic |
| CTCCGCCGCTCTTTGTGATA+AGG | 0.451031 | 1_3:-65378085 | None:intergenic |
| CTCTCCCTCTTATATGGACT+AGG | 0.451280 | 1_3:-65377914 | None:intergenic |
| CCTTGAAGCATTCTAGGTAA+TGG | 0.451961 | 1_3:+65378808 | Msa0133980:three_prime_UTR |
| ACTACCTCGCTCCCTTCGAT+GGG | 0.456414 | 1_3:-65377981 | None:intergenic |
| CTCTCCTTCTTCAAGACTAT+GGG | 0.456592 | 1_3:-65378116 | None:intergenic |
| CTCCCTCTAGAACCATTGAA+TGG | 0.459647 | 1_3:-65378256 | None:intergenic |
| GTGCTAGACTCAATTCCAAT+AGG | 0.462488 | 1_3:-65378852 | None:intergenic |
| GGTAGTCCTGATTATGGTCG+TGG | 0.464089 | 1_3:+65377890 | Msa0133980:CDS |
| TCTAGAACCATTGAATGGGC+TGG | 0.465528 | 1_3:-65378251 | None:intergenic |
| AGCGAGGTAGTCCTGCTTAT+GGG | 0.467125 | 1_3:+65377993 | Msa0133980:CDS |
| CCATTACCTAGAATGCTTCA+AGG | 0.468004 | 1_3:-65378808 | None:intergenic |
| AGAGATGATGATAGGCGAAA+TGG | 0.470810 | 1_3:+65377782 | Msa0133980:CDS |
| ACTTTCAGGACCACCATAGT+TGG | 0.479547 | 1_3:-65378365 | None:intergenic |
| GTGGGCCTAGTCCATATAAG+AGG | 0.481116 | 1_3:+65377909 | Msa0133980:CDS |
| GCCCCGACAATGGCCATGAC+CGG | 0.485215 | 1_3:+65378200 | Msa0133980:CDS |
| CCATCCCTCTCCCTTCTGTA+AGG | 0.485729 | 1_3:-65378031 | None:intergenic |
| CTTTCAGGACCACCATAGTT+GGG | 0.487073 | 1_3:-65378364 | None:intergenic |
| CCTTTCTCGACGATAGGGAC+TGG | 0.488388 | 1_3:-65377867 | None:intergenic |
| CAGTCCCTATCGTCGAGAAA+GGG | 0.488843 | 1_3:+65377868 | Msa0133980:CDS |
| CCAGTCCCTATCGTCGAGAA+AGG | 0.489418 | 1_3:+65377867 | Msa0133980:CDS |
| TATGGAGCTATCTAAATGAA+TGG | 0.494125 | 1_3:-65378693 | None:intergenic |
| CAGGACTACGCCTCCGGTCA+TGG | 0.494311 | 1_3:-65378213 | None:intergenic |
| CTGAAATCATTCTTCTGCAG+GGG | 0.497195 | 1_3:-65378539 | None:intergenic |
| GGGTTTCTGCGCCCATAAGC+AGG | 0.498188 | 1_3:-65378004 | None:intergenic |
| TTGCTGCTAGAGATGATGAT+AGG | 0.503225 | 1_3:+65377774 | Msa0133980:CDS |
| AGCCCTAGTCCTGATGCAAA+AGG | 0.503450 | 1_3:+65378277 | Msa0133980:CDS |
| TCTCCCTTCTGTAAGGACTA+GGG | 0.516595 | 1_3:-65378024 | None:intergenic |
| ACAAAGAGCGGCGGAGATCT+CGG | 0.518072 | 1_3:+65378092 | Msa0133980:CDS |
| CTGCGATATTGTTCATTCAT+GGG | 0.519683 | 1_3:-65378388 | None:intergenic |
| TCCCTCTAGAACCATTGAAT+GGG | 0.520476 | 1_3:-65378255 | None:intergenic |
| CAACGTGACAGAAGCCGTGA+TGG | 0.523338 | 1_3:+65377833 | Msa0133980:CDS |
| AGCAGCCCTGACTATGGGCG+TGG | 0.523546 | 1_3:+65377938 | Msa0133980:CDS |
| CTATCCTTCACAGTACCATA+AGG | 0.528790 | 1_3:-65378178 | None:intergenic |
| CATAATCATTGTATGGGCTG+GGG | 0.536626 | 1_3:-65378303 | None:intergenic |
| CCATAGTTGGGACTGTCCCT+GGG | 0.537074 | 1_3:-65378352 | None:intergenic |
| CTAGTCCATATAAGAGGGAG+AGG | 0.540513 | 1_3:+65377915 | Msa0133980:CDS |
| TCCCTCCATAATCATTGTAT+GGG | 0.541681 | 1_3:-65378309 | None:intergenic |
| AGAGGAGCAGCCCTGACTAT+GGG | 0.542152 | 1_3:+65377933 | Msa0133980:CDS |
| AGAAACCCCAGCCCATTCAA+TGG | 0.543630 | 1_3:+65378244 | Msa0133980:CDS |
| GACCATGTTATACAATCTGT+TGG | 0.553563 | 1_3:-65378586 | None:intergenic |
| CAAATACTATGCCGGAACCC+AGG | 0.554229 | 1_3:+65378335 | Msa0133980:CDS |
| TAGAACCATTGAATGGGCTG+GGG | 0.562539 | 1_3:-65378249 | None:intergenic |
| GCCCTAGTCCTGATGCAAAA+GGG | 0.568477 | 1_3:+65378278 | Msa0133980:CDS |
| TGTTGCCACGCCCATAGTCA+GGG | 0.568955 | 1_3:-65377943 | None:intergenic |
| AATGGACATAGTCCAGATAG+AGG | 0.570808 | 1_3:+65377800 | Msa0133980:CDS |
| CGGTCCCATAGTCTTGAAGA+AGG | 0.573059 | 1_3:+65378112 | Msa0133980:CDS |
| CTACCCCTTTCTCGACGATA+GGG | 0.574524 | 1_3:-65377872 | None:intergenic |
| TTCTGTCACGTTGACGATCA+CGG | 0.576944 | 1_3:-65377823 | None:intergenic |
| TCCGGTCATGGCCATTGTCG+GGG | 0.577707 | 1_3:-65378201 | None:intergenic |
| GAAACCCTAGTCCTTACAGA+AGG | 0.578158 | 1_3:+65378020 | Msa0133980:CDS |
| GTGACAGAAGCCGTGATGGA+AGG | 0.578252 | 1_3:+65377837 | Msa0133980:CDS |
| CTACCTCGCTCCCTTCGATG+GGG | 0.582883 | 1_3:-65377980 | None:intergenic |
| AAATACTATGCCGGAACCCA+GGG | 0.585531 | 1_3:+65378336 | Msa0133980:CDS |
| AGCCCATTCAATGGTTCTAG+AGG | 0.587028 | 1_3:+65378253 | Msa0133980:CDS |
| CTTTCTCGACGATAGGGACT+GGG | 0.589934 | 1_3:-65377866 | None:intergenic |
| CATTACCTAGAATGCTTCAA+GGG | 0.592766 | 1_3:-65378807 | None:intergenic |
| TTCACAGTACCATAAGGACT+AGG | 0.594906 | 1_3:-65378172 | None:intergenic |
| GCCCATACAATGATTATGGA+GGG | 0.597867 | 1_3:+65378308 | Msa0133980:CDS |
| GTAGTCCTGATTATGGTCGT+GGG | 0.598448 | 1_3:+65377891 | Msa0133980:CDS |
| AGCCCATACAATGATTATGG+AGG | 0.598759 | 1_3:+65378307 | Msa0133980:CDS |
| CCATGAATGAACAATATCGC+AGG | 0.599323 | 1_3:+65378389 | Msa0133980:CDS |
| TACCTCGCTCCCTTCGATGG+GGG | 0.599354 | 1_3:-65377979 | None:intergenic |
| AAGGGGCTAGACTCAATTCA+GGG | 0.602517 | 1_3:+65378875 | Msa0133980:three_prime_UTR |
| AGGGAGCCCAAATACTATGC+CGG | 0.602830 | 1_3:+65378327 | Msa0133980:CDS |
| TTTGTGATAAGGACTGCGGC+TGG | 0.604197 | 1_3:-65378074 | None:intergenic |
| CTAGTCCTTACAGAAGGGAG+AGG | 0.605237 | 1_3:+65378026 | Msa0133980:CDS |
| ACTACCCCTTTCTCGACGAT+AGG | 0.605872 | 1_3:-65377873 | None:intergenic |
| AAGGGAGAGGGATGGTGCTG+AGG | 0.606586 | 1_3:+65378039 | Msa0133980:CDS |
| AGTCCCTATCGTCGAGAAAG+GGG | 0.611863 | 1_3:+65377869 | Msa0133980:CDS |
| GCCCATTCAATGGTTCTAGA+GGG | 0.617562 | 1_3:+65378254 | Msa0133980:CDS |
| GGAATTGAGTCTAGCACAAG+GGG | 0.621269 | 1_3:+65378858 | Msa0133980:three_prime_UTR |
| ACTGAAATCATTCTTCTGCA+GGG | 0.625710 | 1_3:-65378540 | None:intergenic |
| GTGAAGGATAGCCCCGACAA+TGG | 0.628171 | 1_3:+65378190 | Msa0133980:CDS |
| TCACAGTACCATAAGGACTA+GGG | 0.629493 | 1_3:-65378171 | None:intergenic |
| TAGTCCTTATGGTACTGTGA+AGG | 0.633795 | 1_3:+65378174 | Msa0133980:CDS |
| TAGTCCTTACAGAAGGGAGA+GGG | 0.635802 | 1_3:+65378027 | Msa0133980:CDS |
| TGAAATCATTCTTCTGCAGG+GGG | 0.642317 | 1_3:-65378538 | None:intergenic |
| ATAGTCTTGAAGAAGGAGAG+AGG | 0.643400 | 1_3:+65378119 | Msa0133980:CDS |
| TGGGCCTAGTCCATATAAGA+GGG | 0.648413 | 1_3:+65377910 | Msa0133980:CDS |
| TGGGTGATCGCCTTCCATCA+CGG | 0.649196 | 1_3:-65377847 | None:intergenic |
| AAACCCTAGTCCTTACAGAA+GGG | 0.652917 | 1_3:+65378021 | Msa0133980:CDS |
| CCGACAATGGCCATGACCGG+AGG | 0.654049 | 1_3:+65378203 | Msa0133980:CDS |
| GGCCAACAGATTGTATAACA+TGG | 0.656152 | 1_3:+65378584 | Msa0133980:three_prime_UTR |
| GTCCTTATCACAAAGAGCGG+CGG | 0.660219 | 1_3:+65378083 | Msa0133980:CDS |
| GCAGTCCTTATCACAAAGAG+CGG | 0.663834 | 1_3:+65378080 | Msa0133980:CDS |
| AGGGACAGTCCCAACTATGG+TGG | 0.672600 | 1_3:+65378355 | Msa0133980:CDS |
| CCTTACAGAAGGGAGAGGGA+TGG | 0.678051 | 1_3:+65378031 | Msa0133980:CDS |
| TTGGAATTGAGTCTAGCACA+AGG | 0.680828 | 1_3:+65378856 | Msa0133980:three_prime_UTR |
| TGGAATTGAGTCTAGCACAA+GGG | 0.684211 | 1_3:+65378857 | Msa0133980:three_prime_UTR |
| GCTCTTTGTGATAAGGACTG+CGG | 0.756142 | 1_3:-65378078 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTTTTATTTATTGGT+TGG | + | chr1_3:65378419-65378438 | Msa0133980:intron | 15.0% |
| !!! | ACATTTTTTTATTTATTGGT+TGG | + | chr1_3:65378419-65378438 | Msa0133980:intron | 15.0% |
| !!! | GCAGACATTTTTTTATTTAT+TGG | + | chr1_3:65378415-65378434 | Msa0133980:intron | 20.0% |
| !! | TTCTTTACATTTGTTTGATA+TGG | + | chr1_3:65378466-65378485 | Msa0133980:intron | 20.0% |
| !!! | GTAGAATTTTTTCTTAATAG+TGG | + | chr1_3:65378732-65378751 | Msa0133980:three_prime_UTR | 20.0% |
| !!! | ATGGTTTTTTAATATAACGT+AGG | + | chr1_3:65378907-65378926 | Msa0133980:three_prime_UTR | 20.0% |
| !!! | TGGTTTTTTAATATAACGTA+GGG | + | chr1_3:65378908-65378927 | Msa0133980:three_prime_UTR | 20.0% |
| !!! | GCAGACATTTTTTTATTTAT+TGG | + | chr1_3:65378415-65378434 | Msa0133980:intron | 20.0% |
| !! | TTCTTTACATTTGTTTGATA+TGG | + | chr1_3:65378466-65378485 | Msa0133980:intron | 20.0% |
| !!! | GTAGAATTTTTTCTTAATAG+TGG | + | chr1_3:65378732-65378751 | Msa0133980:three_prime_UTR | 20.0% |
| !!! | ATGGTTTTTTAATATAACGT+AGG | + | chr1_3:65378907-65378926 | Msa0133980:three_prime_UTR | 20.0% |
| !!! | TGGTTTTTTAATATAACGTA+GGG | + | chr1_3:65378908-65378927 | Msa0133980:three_prime_UTR | 20.0% |
| CAAACAAATGTAAAGAATGC+AGG | - | chr1_3:65378463-65378482 | None:intergenic | 30.0% | |
| TATGGAGCTATCTAAATGAA+TGG | - | chr1_3:65378696-65378715 | None:intergenic | 30.0% | |
| ACAACATTAAACTGAGAGTA+TGG | - | chr1_3:65378714-65378733 | None:intergenic | 30.0% | |
| CACAAGTTCGATAATATTCA+TGG | - | chr1_3:65378769-65378788 | None:intergenic | 30.0% | |
| CAAACAAATGTAAAGAATGC+AGG | - | chr1_3:65378463-65378482 | None:intergenic | 30.0% | |
| TATGGAGCTATCTAAATGAA+TGG | - | chr1_3:65378696-65378715 | None:intergenic | 30.0% | |
| ACAACATTAAACTGAGAGTA+TGG | - | chr1_3:65378714-65378733 | None:intergenic | 30.0% | |
| CACAAGTTCGATAATATTCA+TGG | - | chr1_3:65378769-65378788 | None:intergenic | 30.0% | |
| ATAGAACCTCAAAAAGGTCA+TGG | + | chr1_3:65378142-65378161 | Msa0133980:CDS | 35.0% | |
| TCCCTCCATAATCATTGTAT+GGG | - | chr1_3:65378312-65378331 | None:intergenic | 35.0% | |
| CTGCGATATTGTTCATTCAT+GGG | - | chr1_3:65378391-65378410 | None:intergenic | 35.0% | |
| ACTGAAATCATTCTTCTGCA+GGG | - | chr1_3:65378543-65378562 | None:intergenic | 35.0% | |
| GACCATGTTATACAATCTGT+TGG | - | chr1_3:65378589-65378608 | None:intergenic | 35.0% | |
| TTGTATAACATGGTCGTTAC+AGG | + | chr1_3:65378594-65378613 | Msa0133980:three_prime_UTR | 35.0% | |
| CATTACCTAGAATGCTTCAA+GGG | - | chr1_3:65378810-65378829 | None:intergenic | 35.0% | |
| !! | AGGTAATGGCTTTTAAGTGT+AGG | + | chr1_3:65378822-65378841 | Msa0133980:three_prime_UTR | 35.0% |
| CAATTCAGGGACTTATTTGA+TGG | + | chr1_3:65378888-65378907 | Msa0133980:three_prime_UTR | 35.0% | |
| ATAGAACCTCAAAAAGGTCA+TGG | + | chr1_3:65378142-65378161 | Msa0133980:CDS | 35.0% | |
| TCCCTCCATAATCATTGTAT+GGG | - | chr1_3:65378312-65378331 | None:intergenic | 35.0% | |
| CTGCGATATTGTTCATTCAT+GGG | - | chr1_3:65378391-65378410 | None:intergenic | 35.0% | |
| ACTGAAATCATTCTTCTGCA+GGG | - | chr1_3:65378543-65378562 | None:intergenic | 35.0% | |
| GACCATGTTATACAATCTGT+TGG | - | chr1_3:65378589-65378608 | None:intergenic | 35.0% | |
| TTGTATAACATGGTCGTTAC+AGG | + | chr1_3:65378594-65378613 | Msa0133980:three_prime_UTR | 35.0% | |
| CATTACCTAGAATGCTTCAA+GGG | - | chr1_3:65378810-65378829 | None:intergenic | 35.0% | |
| !! | AGGTAATGGCTTTTAAGTGT+AGG | + | chr1_3:65378822-65378841 | Msa0133980:three_prime_UTR | 35.0% |
| CAATTCAGGGACTTATTTGA+TGG | + | chr1_3:65378888-65378907 | Msa0133980:three_prime_UTR | 35.0% | |
| TTGCTGCTAGAGATGATGAT+AGG | + | chr1_3:65377774-65377793 | Msa0133980:CDS | 40.0% | |
| AGAGATGATGATAGGCGAAA+TGG | + | chr1_3:65377782-65377801 | Msa0133980:CDS | 40.0% | |
| AATGGACATAGTCCAGATAG+AGG | + | chr1_3:65377800-65377819 | Msa0133980:CDS | 40.0% | |
| AAACCCTAGTCCTTACAGAA+GGG | + | chr1_3:65378021-65378040 | Msa0133980:CDS | 40.0% | |
| CTCTCCTTCTTCAAGACTAT+GGG | - | chr1_3:65378119-65378138 | None:intergenic | 40.0% | |
| TCTCTCCTTCTTCAAGACTA+TGG | - | chr1_3:65378120-65378139 | None:intergenic | 40.0% | |
| ! | ATAGTCTTGAAGAAGGAGAG+AGG | + | chr1_3:65378119-65378138 | Msa0133980:CDS | 40.0% |
| GAGAGGATAGAACCTCAAAA+AGG | + | chr1_3:65378136-65378155 | Msa0133980:CDS | 40.0% | |
| ! | TCAGATCCATGACCTTTTTG+AGG | - | chr1_3:65378151-65378170 | None:intergenic | 40.0% |
| TCACAGTACCATAAGGACTA+GGG | - | chr1_3:65378174-65378193 | None:intergenic | 40.0% | |
| TTCACAGTACCATAAGGACT+AGG | - | chr1_3:65378175-65378194 | None:intergenic | 40.0% | |
| TAGTCCTTATGGTACTGTGA+AGG | + | chr1_3:65378174-65378193 | Msa0133980:CDS | 40.0% | |
| CTATCCTTCACAGTACCATA+AGG | - | chr1_3:65378181-65378200 | None:intergenic | 40.0% | |
| !! | TCCCTCTAGAACCATTGAAT+GGG | - | chr1_3:65378258-65378277 | None:intergenic | 40.0% |
| ! | CATAATCATTGTATGGGCTG+GGG | - | chr1_3:65378306-65378325 | None:intergenic | 40.0% |
| CCATAATCATTGTATGGGCT+GGG | - | chr1_3:65378307-65378326 | None:intergenic | 40.0% | |
| TCCATAATCATTGTATGGGC+TGG | - | chr1_3:65378308-65378327 | None:intergenic | 40.0% | |
| AGCCCATACAATGATTATGG+AGG | + | chr1_3:65378307-65378326 | Msa0133980:CDS | 40.0% | |
| GCCCATACAATGATTATGGA+GGG | + | chr1_3:65378308-65378327 | Msa0133980:CDS | 40.0% | |
| CTCCCTCCATAATCATTGTA+TGG | - | chr1_3:65378313-65378332 | None:intergenic | 40.0% | |
| TGTTCATTCATGGGACTTTC+AGG | - | chr1_3:65378382-65378401 | None:intergenic | 40.0% | |
| CCTGCGATATTGTTCATTCA+TGG | - | chr1_3:65378392-65378411 | None:intergenic | 40.0% | |
| CCATGAATGAACAATATCGC+AGG | + | chr1_3:65378389-65378408 | Msa0133980:CDS | 40.0% | |
| TGAAATCATTCTTCTGCAGG+GGG | - | chr1_3:65378541-65378560 | None:intergenic | 40.0% | |
| CTGAAATCATTCTTCTGCAG+GGG | - | chr1_3:65378542-65378561 | None:intergenic | 40.0% | |
| GACTGAAATCATTCTTCTGC+AGG | - | chr1_3:65378544-65378563 | None:intergenic | 40.0% | |
| ! | TCGTTGATGAAAAAGCCTGA+AGG | + | chr1_3:65378562-65378581 | Msa0133980:three_prime_UTR | 40.0% |
| ! | CGTTGATGAAAAAGCCTGAA+GGG | + | chr1_3:65378563-65378582 | Msa0133980:three_prime_UTR | 40.0% |
| GGCCAACAGATTGTATAACA+TGG | + | chr1_3:65378584-65378603 | Msa0133980:three_prime_UTR | 40.0% | |
| CCATTACCTAGAATGCTTCA+AGG | - | chr1_3:65378811-65378830 | None:intergenic | 40.0% | |
| ! | CCTTGAAGCATTCTAGGTAA+TGG | + | chr1_3:65378808-65378827 | Msa0133980:three_prime_UTR | 40.0% |
| AGTGTAGGCATTCTACCTAT+TGG | + | chr1_3:65378837-65378856 | Msa0133980:three_prime_UTR | 40.0% | |
| GTGCTAGACTCAATTCCAAT+AGG | - | chr1_3:65378855-65378874 | None:intergenic | 40.0% | |
| TTGGAATTGAGTCTAGCACA+AGG | + | chr1_3:65378856-65378875 | Msa0133980:three_prime_UTR | 40.0% | |
| TGGAATTGAGTCTAGCACAA+GGG | + | chr1_3:65378857-65378876 | Msa0133980:three_prime_UTR | 40.0% | |
| TTGCTGCTAGAGATGATGAT+AGG | + | chr1_3:65377774-65377793 | Msa0133980:CDS | 40.0% | |
| AGAGATGATGATAGGCGAAA+TGG | + | chr1_3:65377782-65377801 | Msa0133980:CDS | 40.0% | |
| AATGGACATAGTCCAGATAG+AGG | + | chr1_3:65377800-65377819 | Msa0133980:CDS | 40.0% | |
| AAACCCTAGTCCTTACAGAA+GGG | + | chr1_3:65378021-65378040 | Msa0133980:CDS | 40.0% | |
| CTCTCCTTCTTCAAGACTAT+GGG | - | chr1_3:65378119-65378138 | None:intergenic | 40.0% | |
| TCTCTCCTTCTTCAAGACTA+TGG | - | chr1_3:65378120-65378139 | None:intergenic | 40.0% | |
| ! | ATAGTCTTGAAGAAGGAGAG+AGG | + | chr1_3:65378119-65378138 | Msa0133980:CDS | 40.0% |
| GAGAGGATAGAACCTCAAAA+AGG | + | chr1_3:65378136-65378155 | Msa0133980:CDS | 40.0% | |
| ! | TCAGATCCATGACCTTTTTG+AGG | - | chr1_3:65378151-65378170 | None:intergenic | 40.0% |
| TCACAGTACCATAAGGACTA+GGG | - | chr1_3:65378174-65378193 | None:intergenic | 40.0% | |
| TTCACAGTACCATAAGGACT+AGG | - | chr1_3:65378175-65378194 | None:intergenic | 40.0% | |
| TAGTCCTTATGGTACTGTGA+AGG | + | chr1_3:65378174-65378193 | Msa0133980:CDS | 40.0% | |
| CTATCCTTCACAGTACCATA+AGG | - | chr1_3:65378181-65378200 | None:intergenic | 40.0% | |
| !! | TCCCTCTAGAACCATTGAAT+GGG | - | chr1_3:65378258-65378277 | None:intergenic | 40.0% |
| ! | CATAATCATTGTATGGGCTG+GGG | - | chr1_3:65378306-65378325 | None:intergenic | 40.0% |
| CCATAATCATTGTATGGGCT+GGG | - | chr1_3:65378307-65378326 | None:intergenic | 40.0% | |
| TCCATAATCATTGTATGGGC+TGG | - | chr1_3:65378308-65378327 | None:intergenic | 40.0% | |
| AGCCCATACAATGATTATGG+AGG | + | chr1_3:65378307-65378326 | Msa0133980:CDS | 40.0% | |
| GCCCATACAATGATTATGGA+GGG | + | chr1_3:65378308-65378327 | Msa0133980:CDS | 40.0% | |
| CTCCCTCCATAATCATTGTA+TGG | - | chr1_3:65378313-65378332 | None:intergenic | 40.0% | |
| TGTTCATTCATGGGACTTTC+AGG | - | chr1_3:65378382-65378401 | None:intergenic | 40.0% | |
| CCTGCGATATTGTTCATTCA+TGG | - | chr1_3:65378392-65378411 | None:intergenic | 40.0% | |
| CCATGAATGAACAATATCGC+AGG | + | chr1_3:65378389-65378408 | Msa0133980:CDS | 40.0% | |
| TGAAATCATTCTTCTGCAGG+GGG | - | chr1_3:65378541-65378560 | None:intergenic | 40.0% | |
| CTGAAATCATTCTTCTGCAG+GGG | - | chr1_3:65378542-65378561 | None:intergenic | 40.0% | |
| GACTGAAATCATTCTTCTGC+AGG | - | chr1_3:65378544-65378563 | None:intergenic | 40.0% | |
| ! | TCGTTGATGAAAAAGCCTGA+AGG | + | chr1_3:65378562-65378581 | Msa0133980:three_prime_UTR | 40.0% |
| ! | CGTTGATGAAAAAGCCTGAA+GGG | + | chr1_3:65378563-65378582 | Msa0133980:three_prime_UTR | 40.0% |
| GGCCAACAGATTGTATAACA+TGG | + | chr1_3:65378584-65378603 | Msa0133980:three_prime_UTR | 40.0% | |
| CCATTACCTAGAATGCTTCA+AGG | - | chr1_3:65378811-65378830 | None:intergenic | 40.0% | |
| ! | CCTTGAAGCATTCTAGGTAA+TGG | + | chr1_3:65378808-65378827 | Msa0133980:three_prime_UTR | 40.0% |
| AGTGTAGGCATTCTACCTAT+TGG | + | chr1_3:65378837-65378856 | Msa0133980:three_prime_UTR | 40.0% | |
| GTGCTAGACTCAATTCCAAT+AGG | - | chr1_3:65378855-65378874 | None:intergenic | 40.0% | |
| TTGGAATTGAGTCTAGCACA+AGG | + | chr1_3:65378856-65378875 | Msa0133980:three_prime_UTR | 40.0% | |
| TGGAATTGAGTCTAGCACAA+GGG | + | chr1_3:65378857-65378876 | Msa0133980:three_prime_UTR | 40.0% | |
| TTCTGTCACGTTGACGATCA+CGG | - | chr1_3:65377826-65377845 | None:intergenic | 45.0% | |
| GAAAGGGGTAGTCCTGATTA+TGG | + | chr1_3:65377884-65377903 | Msa0133980:CDS | 45.0% | |
| GTAGTCCTGATTATGGTCGT+GGG | + | chr1_3:65377891-65377910 | Msa0133980:CDS | 45.0% | |
| TGGGCCTAGTCCATATAAGA+GGG | + | chr1_3:65377910-65377929 | Msa0133980:CDS | 45.0% | |
| CTCTCCCTCTTATATGGACT+AGG | - | chr1_3:65377917-65377936 | None:intergenic | 45.0% | |
| CTAGTCCATATAAGAGGGAG+AGG | + | chr1_3:65377915-65377934 | Msa0133980:CDS | 45.0% | |
| GAAACCCTAGTCCTTACAGA+AGG | + | chr1_3:65378020-65378039 | Msa0133980:CDS | 45.0% | |
| TCTCCCTTCTGTAAGGACTA+GGG | - | chr1_3:65378027-65378046 | None:intergenic | 45.0% | |
| TAGTCCTTACAGAAGGGAGA+GGG | + | chr1_3:65378027-65378046 | Msa0133980:CDS | 45.0% | |
| GCTCTTTGTGATAAGGACTG+CGG | - | chr1_3:65378081-65378100 | None:intergenic | 45.0% | |
| GCAGTCCTTATCACAAAGAG+CGG | + | chr1_3:65378080-65378099 | Msa0133980:CDS | 45.0% | |
| ! | CTGGGGTTTCTTTTTGCATC+AGG | - | chr1_3:65378235-65378254 | None:intergenic | 45.0% |
| !! | TAGAACCATTGAATGGGCTG+GGG | - | chr1_3:65378252-65378271 | None:intergenic | 45.0% |
| ! | CTAGAACCATTGAATGGGCT+GGG | - | chr1_3:65378253-65378272 | None:intergenic | 45.0% |
| ! | TCTAGAACCATTGAATGGGC+TGG | - | chr1_3:65378254-65378273 | None:intergenic | 45.0% |
| !! | AGCCCATTCAATGGTTCTAG+AGG | + | chr1_3:65378253-65378272 | Msa0133980:CDS | 45.0% |
| !! | GCCCATTCAATGGTTCTAGA+GGG | + | chr1_3:65378254-65378273 | Msa0133980:CDS | 45.0% |
| !! | CTCCCTCTAGAACCATTGAA+TGG | - | chr1_3:65378259-65378278 | None:intergenic | 45.0% |
| ! | TCCCTTTTGCATCAGGACTA+GGG | - | chr1_3:65378282-65378301 | None:intergenic | 45.0% |
| ! | TTCCCTTTTGCATCAGGACT+AGG | - | chr1_3:65378283-65378302 | None:intergenic | 45.0% |
| CCCAGCCCATACAATGATTA+TGG | + | chr1_3:65378304-65378323 | Msa0133980:CDS | 45.0% | |
| TGGGTTCCGGCATAGTATTT+GGG | - | chr1_3:65378336-65378355 | None:intergenic | 45.0% | |
| AAATACTATGCCGGAACCCA+GGG | + | chr1_3:65378336-65378355 | Msa0133980:CDS | 45.0% | |
| CTTTCAGGACCACCATAGTT+GGG | - | chr1_3:65378367-65378386 | None:intergenic | 45.0% | |
| ACTTTCAGGACCACCATAGT+TGG | - | chr1_3:65378368-65378387 | None:intergenic | 45.0% | |
| ATACAATCTGTTGGCCCTTC+AGG | - | chr1_3:65378580-65378599 | None:intergenic | 45.0% | |
| GTCGACAAAGCTTCGAAACT+TGG | + | chr1_3:65378653-65378672 | Msa0133980:three_prime_UTR | 45.0% | |
| GGAATTGAGTCTAGCACAAG+GGG | + | chr1_3:65378858-65378877 | Msa0133980:three_prime_UTR | 45.0% | |
| AAGGGGCTAGACTCAATTCA+GGG | + | chr1_3:65378875-65378894 | Msa0133980:three_prime_UTR | 45.0% | |
| TTCTGTCACGTTGACGATCA+CGG | - | chr1_3:65377826-65377845 | None:intergenic | 45.0% | |
| GAAAGGGGTAGTCCTGATTA+TGG | + | chr1_3:65377884-65377903 | Msa0133980:CDS | 45.0% | |
| GTAGTCCTGATTATGGTCGT+GGG | + | chr1_3:65377891-65377910 | Msa0133980:CDS | 45.0% | |
| TGGGCCTAGTCCATATAAGA+GGG | + | chr1_3:65377910-65377929 | Msa0133980:CDS | 45.0% | |
| CTCTCCCTCTTATATGGACT+AGG | - | chr1_3:65377917-65377936 | None:intergenic | 45.0% | |
| CTAGTCCATATAAGAGGGAG+AGG | + | chr1_3:65377915-65377934 | Msa0133980:CDS | 45.0% | |
| GAAACCCTAGTCCTTACAGA+AGG | + | chr1_3:65378020-65378039 | Msa0133980:CDS | 45.0% | |
| TCTCCCTTCTGTAAGGACTA+GGG | - | chr1_3:65378027-65378046 | None:intergenic | 45.0% | |
| TAGTCCTTACAGAAGGGAGA+GGG | + | chr1_3:65378027-65378046 | Msa0133980:CDS | 45.0% | |
| GCTCTTTGTGATAAGGACTG+CGG | - | chr1_3:65378081-65378100 | None:intergenic | 45.0% | |
| GCAGTCCTTATCACAAAGAG+CGG | + | chr1_3:65378080-65378099 | Msa0133980:CDS | 45.0% | |
| ! | CTGGGGTTTCTTTTTGCATC+AGG | - | chr1_3:65378235-65378254 | None:intergenic | 45.0% |
| !! | TAGAACCATTGAATGGGCTG+GGG | - | chr1_3:65378252-65378271 | None:intergenic | 45.0% |
| ! | CTAGAACCATTGAATGGGCT+GGG | - | chr1_3:65378253-65378272 | None:intergenic | 45.0% |
| ! | TCTAGAACCATTGAATGGGC+TGG | - | chr1_3:65378254-65378273 | None:intergenic | 45.0% |
| !! | AGCCCATTCAATGGTTCTAG+AGG | + | chr1_3:65378253-65378272 | Msa0133980:CDS | 45.0% |
| !! | GCCCATTCAATGGTTCTAGA+GGG | + | chr1_3:65378254-65378273 | Msa0133980:CDS | 45.0% |
| !! | CTCCCTCTAGAACCATTGAA+TGG | - | chr1_3:65378259-65378278 | None:intergenic | 45.0% |
| ! | TCCCTTTTGCATCAGGACTA+GGG | - | chr1_3:65378282-65378301 | None:intergenic | 45.0% |
| ! | TTCCCTTTTGCATCAGGACT+AGG | - | chr1_3:65378283-65378302 | None:intergenic | 45.0% |
| CCCAGCCCATACAATGATTA+TGG | + | chr1_3:65378304-65378323 | Msa0133980:CDS | 45.0% | |
| TGGGTTCCGGCATAGTATTT+GGG | - | chr1_3:65378336-65378355 | None:intergenic | 45.0% | |
| AAATACTATGCCGGAACCCA+GGG | + | chr1_3:65378336-65378355 | Msa0133980:CDS | 45.0% | |
| CTTTCAGGACCACCATAGTT+GGG | - | chr1_3:65378367-65378386 | None:intergenic | 45.0% | |
| ACTTTCAGGACCACCATAGT+TGG | - | chr1_3:65378368-65378387 | None:intergenic | 45.0% | |
| ATACAATCTGTTGGCCCTTC+AGG | - | chr1_3:65378580-65378599 | None:intergenic | 45.0% | |
| GTCGACAAAGCTTCGAAACT+TGG | + | chr1_3:65378653-65378672 | Msa0133980:three_prime_UTR | 45.0% | |
| GGAATTGAGTCTAGCACAAG+GGG | + | chr1_3:65378858-65378877 | Msa0133980:three_prime_UTR | 45.0% | |
| AAGGGGCTAGACTCAATTCA+GGG | + | chr1_3:65378875-65378894 | Msa0133980:three_prime_UTR | 45.0% | |
| CTTTCTCGACGATAGGGACT+GGG | - | chr1_3:65377869-65377888 | None:intergenic | 50.0% | |
| CAGTCCCTATCGTCGAGAAA+GGG | + | chr1_3:65377868-65377887 | Msa0133980:CDS | 50.0% | |
| AGTCCCTATCGTCGAGAAAG+GGG | + | chr1_3:65377869-65377888 | Msa0133980:CDS | 50.0% | |
| CTACCCCTTTCTCGACGATA+GGG | - | chr1_3:65377875-65377894 | None:intergenic | 50.0% | |
| ACTACCCCTTTCTCGACGAT+AGG | - | chr1_3:65377876-65377895 | None:intergenic | 50.0% | |
| GGTAGTCCTGATTATGGTCG+TGG | + | chr1_3:65377890-65377909 | Msa0133980:CDS | 50.0% | |
| GTGGGCCTAGTCCATATAAG+AGG | + | chr1_3:65377909-65377928 | Msa0133980:CDS | 50.0% | |
| CTGCTCCTCTCCCTCTTATA+TGG | - | chr1_3:65377923-65377942 | None:intergenic | 50.0% | |
| TTCGATGGGGGCTTCTACTA+CGG | - | chr1_3:65377970-65377989 | None:intergenic | 50.0% | |
| TAGTAGAAGCCCCCATCGAA+GGG | + | chr1_3:65377970-65377989 | Msa0133980:CDS | 50.0% | |
| AGCGAGGTAGTCCTGCTTAT+GGG | + | chr1_3:65377993-65378012 | Msa0133980:CDS | 50.0% | |
| CTCTCCCTTCTGTAAGGACT+AGG | - | chr1_3:65378028-65378047 | None:intergenic | 50.0% | |
| CTAGTCCTTACAGAAGGGAG+AGG | + | chr1_3:65378026-65378045 | Msa0133980:CDS | 50.0% | |
| TTTGTGATAAGGACTGCGGC+TGG | - | chr1_3:65378077-65378096 | None:intergenic | 50.0% | |
| GTCCTTATCACAAAGAGCGG+CGG | + | chr1_3:65378083-65378102 | Msa0133980:CDS | 50.0% | |
| ! | CGGTCCCATAGTCTTGAAGA+AGG | + | chr1_3:65378112-65378131 | Msa0133980:CDS | 50.0% |
| GGATCTGACCCTAGTCCTTA+TGG | + | chr1_3:65378163-65378182 | Msa0133980:CDS | 50.0% | |
| AGAAACCCCAGCCCATTCAA+TGG | + | chr1_3:65378244-65378263 | Msa0133980:CDS | 50.0% | |
| AGCCCTAGTCCTGATGCAAA+AGG | + | chr1_3:65378277-65378296 | Msa0133980:CDS | 50.0% | |
| GCCCTAGTCCTGATGCAAAA+GGG | + | chr1_3:65378278-65378297 | Msa0133980:CDS | 50.0% | |
| AGGGAGCCCAAATACTATGC+CGG | + | chr1_3:65378327-65378346 | Msa0133980:CDS | 50.0% | |
| CTGGGTTCCGGCATAGTATT+TGG | - | chr1_3:65378337-65378356 | None:intergenic | 50.0% | |
| CAAATACTATGCCGGAACCC+AGG | + | chr1_3:65378335-65378354 | Msa0133980:CDS | 50.0% | |
| ! | GTGTGCCCTTGAAGCATTCT+AGG | + | chr1_3:65378802-65378821 | Msa0133980:three_prime_UTR | 50.0% |
| CAAGGGGCTAGACTCAATTC+AGG | + | chr1_3:65378874-65378893 | Msa0133980:three_prime_UTR | 50.0% | |
| CTTTCTCGACGATAGGGACT+GGG | - | chr1_3:65377869-65377888 | None:intergenic | 50.0% | |
| CAGTCCCTATCGTCGAGAAA+GGG | + | chr1_3:65377868-65377887 | Msa0133980:CDS | 50.0% | |
| AGTCCCTATCGTCGAGAAAG+GGG | + | chr1_3:65377869-65377888 | Msa0133980:CDS | 50.0% | |
| CTACCCCTTTCTCGACGATA+GGG | - | chr1_3:65377875-65377894 | None:intergenic | 50.0% | |
| ACTACCCCTTTCTCGACGAT+AGG | - | chr1_3:65377876-65377895 | None:intergenic | 50.0% | |
| GGTAGTCCTGATTATGGTCG+TGG | + | chr1_3:65377890-65377909 | Msa0133980:CDS | 50.0% | |
| GTGGGCCTAGTCCATATAAG+AGG | + | chr1_3:65377909-65377928 | Msa0133980:CDS | 50.0% | |
| CTGCTCCTCTCCCTCTTATA+TGG | - | chr1_3:65377923-65377942 | None:intergenic | 50.0% | |
| TTCGATGGGGGCTTCTACTA+CGG | - | chr1_3:65377970-65377989 | None:intergenic | 50.0% | |
| TAGTAGAAGCCCCCATCGAA+GGG | + | chr1_3:65377970-65377989 | Msa0133980:CDS | 50.0% | |
| AGCGAGGTAGTCCTGCTTAT+GGG | + | chr1_3:65377993-65378012 | Msa0133980:CDS | 50.0% | |
| CTCTCCCTTCTGTAAGGACT+AGG | - | chr1_3:65378028-65378047 | None:intergenic | 50.0% | |
| CTAGTCCTTACAGAAGGGAG+AGG | + | chr1_3:65378026-65378045 | Msa0133980:CDS | 50.0% | |
| TTTGTGATAAGGACTGCGGC+TGG | - | chr1_3:65378077-65378096 | None:intergenic | 50.0% | |
| GTCCTTATCACAAAGAGCGG+CGG | + | chr1_3:65378083-65378102 | Msa0133980:CDS | 50.0% | |
| ! | CGGTCCCATAGTCTTGAAGA+AGG | + | chr1_3:65378112-65378131 | Msa0133980:CDS | 50.0% |
| GGATCTGACCCTAGTCCTTA+TGG | + | chr1_3:65378163-65378182 | Msa0133980:CDS | 50.0% | |
| AGAAACCCCAGCCCATTCAA+TGG | + | chr1_3:65378244-65378263 | Msa0133980:CDS | 50.0% | |
| AGCCCTAGTCCTGATGCAAA+AGG | + | chr1_3:65378277-65378296 | Msa0133980:CDS | 50.0% | |
| GCCCTAGTCCTGATGCAAAA+GGG | + | chr1_3:65378278-65378297 | Msa0133980:CDS | 50.0% | |
| AGGGAGCCCAAATACTATGC+CGG | + | chr1_3:65378327-65378346 | Msa0133980:CDS | 50.0% | |
| CTGGGTTCCGGCATAGTATT+TGG | - | chr1_3:65378337-65378356 | None:intergenic | 50.0% | |
| CAAATACTATGCCGGAACCC+AGG | + | chr1_3:65378335-65378354 | Msa0133980:CDS | 50.0% | |
| ! | GTGTGCCCTTGAAGCATTCT+AGG | + | chr1_3:65378802-65378821 | Msa0133980:three_prime_UTR | 50.0% |
| CAAGGGGCTAGACTCAATTC+AGG | + | chr1_3:65378874-65378893 | Msa0133980:three_prime_UTR | 50.0% | |
| TGACGATCACGGCCTCTATC+TGG | - | chr1_3:65377815-65377834 | None:intergenic | 55.0% | |
| CAACGTGACAGAAGCCGTGA+TGG | + | chr1_3:65377833-65377852 | Msa0133980:CDS | 55.0% | |
| ! | GTGACAGAAGCCGTGATGGA+AGG | + | chr1_3:65377837-65377856 | Msa0133980:CDS | 55.0% |
| TGGGTGATCGCCTTCCATCA+CGG | - | chr1_3:65377850-65377869 | None:intergenic | 55.0% | |
| CCTTTCTCGACGATAGGGAC+TGG | - | chr1_3:65377870-65377889 | None:intergenic | 55.0% | |
| CCAGTCCCTATCGTCGAGAA+AGG | + | chr1_3:65377867-65377886 | Msa0133980:CDS | 55.0% | |
| CTAGGCCCACGACCATAATC+AGG | - | chr1_3:65377899-65377918 | None:intergenic | 55.0% | |
| AGAGGAGCAGCCCTGACTAT+GGG | + | chr1_3:65377933-65377952 | Msa0133980:CDS | 55.0% | |
| TGTTGCCACGCCCATAGTCA+GGG | - | chr1_3:65377946-65377965 | None:intergenic | 55.0% | |
| GTAGTAGAAGCCCCCATCGA+AGG | + | chr1_3:65377969-65377988 | Msa0133980:CDS | 55.0% | |
| ACTACCTCGCTCCCTTCGAT+GGG | - | chr1_3:65377984-65378003 | None:intergenic | 55.0% | |
| GAGCGAGGTAGTCCTGCTTA+TGG | + | chr1_3:65377992-65378011 | Msa0133980:CDS | 55.0% | |
| CCATCCCTCTCCCTTCTGTA+AGG | - | chr1_3:65378034-65378053 | None:intergenic | 55.0% | |
| CCTTACAGAAGGGAGAGGGA+TGG | + | chr1_3:65378031-65378050 | Msa0133980:CDS | 55.0% | |
| CTCCGCCGCTCTTTGTGATA+AGG | - | chr1_3:65378088-65378107 | None:intergenic | 55.0% | |
| ACAAAGAGCGGCGGAGATCT+CGG | + | chr1_3:65378092-65378111 | Msa0133980:CDS | 55.0% | |
| GTGAAGGATAGCCCCGACAA+TGG | + | chr1_3:65378190-65378209 | Msa0133980:CDS | 55.0% | |
| TTGCATCAGGACTACGCCTC+CGG | - | chr1_3:65378222-65378241 | None:intergenic | 55.0% | |
| ! | CTGGGGTTCCCTTTTGCATC+AGG | - | chr1_3:65378289-65378308 | None:intergenic | 55.0% |
| CCATAGTTGGGACTGTCCCT+GGG | - | chr1_3:65378355-65378374 | None:intergenic | 55.0% | |
| ACCATAGTTGGGACTGTCCC+TGG | - | chr1_3:65378356-65378375 | None:intergenic | 55.0% | |
| AGGGACAGTCCCAACTATGG+TGG | + | chr1_3:65378355-65378374 | Msa0133980:CDS | 55.0% | |
| ATTCTTCTGCAGGGGGTGAC+TGG | - | chr1_3:65378534-65378553 | None:intergenic | 55.0% | |
| TGACGATCACGGCCTCTATC+TGG | - | chr1_3:65377815-65377834 | None:intergenic | 55.0% | |
| CAACGTGACAGAAGCCGTGA+TGG | + | chr1_3:65377833-65377852 | Msa0133980:CDS | 55.0% | |
| ! | GTGACAGAAGCCGTGATGGA+AGG | + | chr1_3:65377837-65377856 | Msa0133980:CDS | 55.0% |
| TGGGTGATCGCCTTCCATCA+CGG | - | chr1_3:65377850-65377869 | None:intergenic | 55.0% | |
| CCTTTCTCGACGATAGGGAC+TGG | - | chr1_3:65377870-65377889 | None:intergenic | 55.0% | |
| CCAGTCCCTATCGTCGAGAA+AGG | + | chr1_3:65377867-65377886 | Msa0133980:CDS | 55.0% | |
| CTAGGCCCACGACCATAATC+AGG | - | chr1_3:65377899-65377918 | None:intergenic | 55.0% | |
| AGAGGAGCAGCCCTGACTAT+GGG | + | chr1_3:65377933-65377952 | Msa0133980:CDS | 55.0% | |
| TGTTGCCACGCCCATAGTCA+GGG | - | chr1_3:65377946-65377965 | None:intergenic | 55.0% | |
| GTAGTAGAAGCCCCCATCGA+AGG | + | chr1_3:65377969-65377988 | Msa0133980:CDS | 55.0% | |
| ACTACCTCGCTCCCTTCGAT+GGG | - | chr1_3:65377984-65378003 | None:intergenic | 55.0% | |
| GAGCGAGGTAGTCCTGCTTA+TGG | + | chr1_3:65377992-65378011 | Msa0133980:CDS | 55.0% | |
| CCATCCCTCTCCCTTCTGTA+AGG | - | chr1_3:65378034-65378053 | None:intergenic | 55.0% | |
| CCTTACAGAAGGGAGAGGGA+TGG | + | chr1_3:65378031-65378050 | Msa0133980:CDS | 55.0% | |
| CTCCGCCGCTCTTTGTGATA+AGG | - | chr1_3:65378088-65378107 | None:intergenic | 55.0% | |
| ACAAAGAGCGGCGGAGATCT+CGG | + | chr1_3:65378092-65378111 | Msa0133980:CDS | 55.0% | |
| GTGAAGGATAGCCCCGACAA+TGG | + | chr1_3:65378190-65378209 | Msa0133980:CDS | 55.0% | |
| TTGCATCAGGACTACGCCTC+CGG | - | chr1_3:65378222-65378241 | None:intergenic | 55.0% | |
| ! | CTGGGGTTCCCTTTTGCATC+AGG | - | chr1_3:65378289-65378308 | None:intergenic | 55.0% |
| CCATAGTTGGGACTGTCCCT+GGG | - | chr1_3:65378355-65378374 | None:intergenic | 55.0% | |
| ACCATAGTTGGGACTGTCCC+TGG | - | chr1_3:65378356-65378375 | None:intergenic | 55.0% | |
| AGGGACAGTCCCAACTATGG+TGG | + | chr1_3:65378355-65378374 | Msa0133980:CDS | 55.0% | |
| ATTCTTCTGCAGGGGGTGAC+TGG | - | chr1_3:65378534-65378553 | None:intergenic | 55.0% | |
| GAGAGGAGCAGCCCTGACTA+TGG | + | chr1_3:65377932-65377951 | Msa0133980:CDS | 60.0% | |
| CTGTTGCCACGCCCATAGTC+AGG | - | chr1_3:65377947-65377966 | None:intergenic | 60.0% | |
| TACCTCGCTCCCTTCGATGG+GGG | - | chr1_3:65377982-65378001 | None:intergenic | 60.0% | |
| CTACCTCGCTCCCTTCGATG+GGG | - | chr1_3:65377983-65378002 | None:intergenic | 60.0% | |
| GACTACCTCGCTCCCTTCGA+TGG | - | chr1_3:65377985-65378004 | None:intergenic | 60.0% | |
| GGGTTTCTGCGCCCATAAGC+AGG | - | chr1_3:65378007-65378026 | None:intergenic | 60.0% | |
| ! | AAGGGAGAGGGATGGTGCTG+AGG | + | chr1_3:65378039-65378058 | Msa0133980:CDS | 60.0% |
| TCCGGTCATGGCCATTGTCG+GGG | - | chr1_3:65378204-65378223 | None:intergenic | 60.0% | |
| CTCCGGTCATGGCCATTGTC+GGG | - | chr1_3:65378205-65378224 | None:intergenic | 60.0% | |
| CCTCCGGTCATGGCCATTGT+CGG | - | chr1_3:65378206-65378225 | None:intergenic | 60.0% | |
| TTGGGACTGTCCCTGGGTTC+CGG | - | chr1_3:65378349-65378368 | None:intergenic | 60.0% | |
| CCCAGGGACAGTCCCAACTA+TGG | + | chr1_3:65378352-65378371 | Msa0133980:CDS | 60.0% | |
| GAGAGGAGCAGCCCTGACTA+TGG | + | chr1_3:65377932-65377951 | Msa0133980:CDS | 60.0% | |
| CTGTTGCCACGCCCATAGTC+AGG | - | chr1_3:65377947-65377966 | None:intergenic | 60.0% | |
| TACCTCGCTCCCTTCGATGG+GGG | - | chr1_3:65377982-65378001 | None:intergenic | 60.0% | |
| CTACCTCGCTCCCTTCGATG+GGG | - | chr1_3:65377983-65378002 | None:intergenic | 60.0% | |
| GACTACCTCGCTCCCTTCGA+TGG | - | chr1_3:65377985-65378004 | None:intergenic | 60.0% | |
| GGGTTTCTGCGCCCATAAGC+AGG | - | chr1_3:65378007-65378026 | None:intergenic | 60.0% | |
| ! | AAGGGAGAGGGATGGTGCTG+AGG | + | chr1_3:65378039-65378058 | Msa0133980:CDS | 60.0% |
| TCCGGTCATGGCCATTGTCG+GGG | - | chr1_3:65378204-65378223 | None:intergenic | 60.0% | |
| CTCCGGTCATGGCCATTGTC+GGG | - | chr1_3:65378205-65378224 | None:intergenic | 60.0% | |
| CCTCCGGTCATGGCCATTGT+CGG | - | chr1_3:65378206-65378225 | None:intergenic | 60.0% | |
| TTGGGACTGTCCCTGGGTTC+CGG | - | chr1_3:65378349-65378368 | None:intergenic | 60.0% | |
| CCCAGGGACAGTCCCAACTA+TGG | + | chr1_3:65378352-65378371 | Msa0133980:CDS | 60.0% | |
| AGCAGCCCTGACTATGGGCG+TGG | + | chr1_3:65377938-65377957 | Msa0133980:CDS | 65.0% | |
| GCCCCGACAATGGCCATGAC+CGG | + | chr1_3:65378200-65378219 | Msa0133980:CDS | 65.0% | |
| CCGACAATGGCCATGACCGG+AGG | + | chr1_3:65378203-65378222 | Msa0133980:CDS | 65.0% | |
| CAGGACTACGCCTCCGGTCA+TGG | - | chr1_3:65378216-65378235 | None:intergenic | 65.0% | |
| AGCAGCCCTGACTATGGGCG+TGG | + | chr1_3:65377938-65377957 | Msa0133980:CDS | 65.0% | |
| GCCCCGACAATGGCCATGAC+CGG | + | chr1_3:65378200-65378219 | Msa0133980:CDS | 65.0% | |
| CCGACAATGGCCATGACCGG+AGG | + | chr1_3:65378203-65378222 | Msa0133980:CDS | 65.0% | |
| CAGGACTACGCCTCCGGTCA+TGG | - | chr1_3:65378216-65378235 | None:intergenic | 65.0% | |
| AGCCCCCATCGAAGGGAGCG+AGG | + | chr1_3:65377977-65377996 | Msa0133980:CDS | 70.0% | |
| AGCCCCCATCGAAGGGAGCG+AGG | + | chr1_3:65377977-65377996 | Msa0133980:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 65377741 | 65378960 | 65377741 | ID=Msa0133980;Name=Msa0133980 |
| chr1_3 | mRNA | 65377741 | 65378960 | 65377741 | ID=Msa0133980-mRNA-1;Parent=Msa0133980;Name=Msa0133980-mRNA-1;_AED=0.00;_eAED=0.00;_QI=8|1|1|1|1|1|2|405|230 |
| chr1_3 | exon | 65377741 | 65378410 | 65377741 | ID=Msa0133980-mRNA-1:exon:22169;Parent=Msa0133980-mRNA-1 |
| chr1_3 | exon | 65378525 | 65378960 | 65378525 | ID=Msa0133980-mRNA-1:exon:22170;Parent=Msa0133980-mRNA-1 |
| chr1_3 | five_prime_UTR | 65377741 | 65377748 | 65377741 | ID=Msa0133980-mRNA-1:five_prime_utr;Parent=Msa0133980-mRNA-1 |
| chr1_3 | CDS | 65377749 | 65378410 | 65377749 | ID=Msa0133980-mRNA-1:cds;Parent=Msa0133980-mRNA-1 |
| chr1_3 | CDS | 65378525 | 65378555 | 65378525 | ID=Msa0133980-mRNA-1:cds;Parent=Msa0133980-mRNA-1 |
| chr1_3 | three_prime_UTR | 65378556 | 65378960 | 65378556 | ID=Msa0133980-mRNA-1:three_prime_utr;Parent=Msa0133980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
