AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1310700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1310700 MtrunA17_Chr8g0337421 97.217 575 10 1 5 579 3 571 0.0 1152
Msa1310700 MtrunA17_Chr8g0381791 48.480 592 259 8 19 566 10 599 0.0 547
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1310700 AT3G03570.1 58.007 612 195 7 7 568 3 602 0.0 711
Msa1310700 AT4G40050.1 46.000 600 264 8 17 564 6 597 0.0 525
Msa1310700 AT4G40050.2 46.370 427 179 5 17 394 6 431 3.10e-129 386

Find 143 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGATTGGTCAATTGTATTT+TGG 0.166583 8_4:+7328025 Msa1310700:CDS
ATAAGGTAAGTCTCTGATTT+TGG 0.195109 8_4:-7327783 None:intergenic
CAATACCACATTTACAAGTT+TGG 0.205015 8_4:+7335523 Msa1310700:three_prime_UTR
TTCTTGCTTATCTAGGAAAT+TGG 0.214151 8_4:-7335084 None:intergenic
TCAAAGTCTACACACAATTA+TGG 0.222707 8_4:+7327927 Msa1310700:CDS
CTTGTATATTTGTCAGCTTC+AGG 0.239358 8_4:+7330435 Msa1310700:CDS
ACCCTGCTTCGATTAGTTTC+TGG 0.249139 8_4:-7327970 None:intergenic
TGTCATCATCATTAAATAAC+TGG 0.265941 8_4:+7333940 Msa1310700:CDS
GTCCAGAAAACTTCGCTTAC+TGG 0.296498 8_4:-7327731 None:intergenic
AAGGTTGTTGTGGTGGAAAT+TGG 0.304615 8_4:+7328310 Msa1310700:CDS
AATACCACATTTACAAGTTT+GGG 0.304767 8_4:+7335524 Msa1310700:three_prime_UTR
AACCTGGAGCGTTGGTAATA+AGG 0.311040 8_4:-7327800 None:intergenic
CTTAGTCAGAATGGGGCAAC+TGG 0.313804 8_4:+7329254 Msa1310700:CDS
GGTGAGGTATAGTTTGGTTT+TGG 0.316137 8_4:+7328375 Msa1310700:CDS
TTTCTTCCCTTCTTTGGAAA+TGG 0.316566 8_4:+7335622 Msa1310700:three_prime_UTR
CAGACACGCTTGATCCAGTT+TGG 0.324409 8_4:+7333982 Msa1310700:CDS
TTCCTATCAACATCACAATT+TGG 0.324808 8_4:+7335164 Msa1310700:three_prime_UTR
TTCAGGCACTGATATTGATT+TGG 0.335770 8_4:+7333774 Msa1310700:CDS
ATAGCTTTCCGTGGGTTTGC+TGG 0.342681 8_4:-7329323 None:intergenic
AATGCAGGAGCAGGATCTTC+TGG 0.343711 8_4:+7330569 Msa1310700:intron
GATTGCTCACATTCTTCAAA+TGG 0.351230 8_4:+7333691 Msa1310700:CDS
AGGTTGTTGTGGTGGAAATT+GGG 0.356684 8_4:+7328311 Msa1310700:CDS
TGCAGTGAAAGGGTATAAAA+TGG 0.357100 8_4:-7335374 None:intergenic
GTCATAACTGAAGCAGAAAA+AGG 0.371539 8_4:+7333616 Msa1310700:CDS
TAGAAAGTCCGATGGATATA+TGG 0.374504 8_4:-7332912 None:intergenic
GCAACCAGATTCATTATTCC+CGG 0.374900 8_4:-7330594 None:intergenic
AGTGAAGTTCTTGCTTATCT+AGG 0.376091 8_4:-7335091 None:intergenic
CCTAAAACCTGTCCCCAAAC+TGG 0.377457 8_4:-7333996 None:intergenic
TTCCGCTTCGCGATAGCAAC+AGG 0.379717 8_4:-7328427 None:intergenic
CAAGCTTTCTGTTTGCTGCT+AGG 0.390262 8_4:+7333748 Msa1310700:CDS
CATTGTCTACCTCATTATAA+TGG 0.392588 8_4:-7328483 None:intergenic
GTTGAAGAAGAAGACGAAAA+TGG 0.398872 8_4:+7327667 Msa1310700:exon
AGACACGCTTGATCCAGTTT+GGG 0.402043 8_4:+7333983 Msa1310700:CDS
AATTTGTGAGGAGCTTCCTT+TGG 0.408972 8_4:+7330401 Msa1310700:CDS
TAGACCGGTGAGGTATAGTT+TGG 0.415656 8_4:+7328369 Msa1310700:CDS
GGAACACGCGGTAAAGTATC+AGG 0.417239 8_4:-7328406 None:intergenic
GAGGGAAATGTTGCAACAAT+TGG 0.418882 8_4:+7328219 Msa1310700:CDS
GCAGTGTGCCAACATCTTCA+TGG 0.422064 8_4:-7335465 None:intergenic
GTTCAAAACTTAGTCAGAAT+GGG 0.428000 8_4:+7329246 Msa1310700:CDS
TCGAAGCAGGGTTGAAAAGA+TGG 0.433850 8_4:+7327981 Msa1310700:CDS
GAATCTGGTTGCATAAACTT+AGG 0.440689 8_4:+7330605 Msa1310700:CDS
GACCAAATTGTGATGTTGAT+AGG 0.442993 8_4:-7335166 None:intergenic
AATAATGCCATTTCCAAAGA+AGG 0.444819 8_4:-7335629 None:intergenic
CTGTAAGAAACATGGTGAAT+AGG 0.449815 8_4:-7333717 None:intergenic
CATAAGAAGTCTCCTTATGA+AGG 0.452160 8_4:-7334024 None:intergenic
GGAGCAGGATCTTCTGGTGC+CGG 0.452574 8_4:+7330575 Msa1310700:intron
ATTCACAACTGATCCACGTT+TGG 0.452846 8_4:-7335036 None:intergenic
TCATAAGGAGACTTCTTATG+AGG 0.460410 8_4:+7334027 Msa1310700:CDS
TACCTTATTACCAACGCTCC+AGG 0.460837 8_4:+7327798 Msa1310700:CDS
GGTTCAAAACTTAGTCAGAA+TGG 0.466136 8_4:+7329245 Msa1310700:CDS
CGCCAGAAACTAATCGAAGC+AGG 0.467627 8_4:+7327968 Msa1310700:CDS
CAGAATGGGGCAACTGGGAC+TGG 0.472227 8_4:+7329260 Msa1310700:CDS
AGAAGTGGTCTTCTAGTAAA+CGG 0.476831 8_4:-7332935 None:intergenic
ATTGCTCACATTCTTCAAAT+GGG 0.480586 8_4:+7333692 Msa1310700:CDS
CAAAGAGAAAGGCGCTTATG+TGG 0.483117 8_4:+7335241 Msa1310700:three_prime_UTR
ATCATTAAATAACTGGGGAT+TGG 0.484718 8_4:+7333947 Msa1310700:CDS
TTAGGTTCCCGTGGAGATAG+AGG 0.488753 8_4:+7330623 Msa1310700:CDS
GGAGAAATTGCGTCGCGGAT+TGG 0.489477 8_4:+7328010 Msa1310700:CDS
CATACGAGGTCAACACTGTC+TGG 0.490644 8_4:-7334843 None:intergenic
TCCAGAAAACTTCGCTTACT+GGG 0.491461 8_4:-7327730 None:intergenic
TATTTCTTCCATGAAGATGT+TGG 0.492746 8_4:+7335457 Msa1310700:three_prime_UTR
CAGAAGCACATAATGTATAC+AGG 0.493159 8_4:+7335115 Msa1310700:three_prime_UTR
CAAGATTATAGAACAGAACT+AGG 0.495917 8_4:+7335310 Msa1310700:three_prime_UTR
AGGACAGGCGTTGGAAGAGA+AGG 0.501368 8_4:-7334907 None:intergenic
AAATAACTGGGGATTGGCGT+TGG 0.503199 8_4:+7333953 Msa1310700:CDS
GCTTGATCCAGTTTGGGGAC+AGG 0.503899 8_4:+7333989 Msa1310700:CDS
ATCTTGACACTTGCAGTGAA+AGG 0.509256 8_4:-7335385 None:intergenic
AGTGTAATTCTGCAACTAGC+TGG 0.509337 8_4:+7334952 Msa1310700:CDS
GAAGTGAAATTATCCTCTAC+CGG 0.510144 8_4:+7327561 Msa1310700:five_prime_UTR
GGGTTGAAAAGATGGGAAAT+CGG 0.518077 8_4:+7327989 Msa1310700:CDS
TGTGAGGAGCTTCCTTTGGA+TGG 0.519066 8_4:+7330405 Msa1310700:CDS
ACAAAAGGAGGCAAACGGCT+TGG 0.523588 8_4:-7333664 None:intergenic
GTCATCATCATTAAATAACT+GGG 0.524171 8_4:+7333941 Msa1310700:CDS
ATGAGCAAGTGCACAAACAT+TGG 0.525194 8_4:-7335411 None:intergenic
TCGTGTAATAATTCAAGTGA+AGG 0.529251 8_4:+7335199 Msa1310700:three_prime_UTR
TCTTGACACTTGCAGTGAAA+GGG 0.531405 8_4:-7335384 None:intergenic
GCATGACAAGTTGTGTGCTC+AGG 0.537597 8_4:+7335285 Msa1310700:three_prime_UTR
GGTGCCGGGAATAATGAATC+TGG 0.539248 8_4:+7330590 Msa1310700:CDS
AGGAAGCTCCTCACAAATTG+TGG 0.542408 8_4:-7330397 None:intergenic
CGAAGCAGGGTTGAAAAGAT+GGG 0.551412 8_4:+7327982 Msa1310700:CDS
TGAGTGTAAGAGAGTGTTTG+TGG 0.552604 8_4:+7328267 Msa1310700:CDS
GATGCTTCAATGTTTAGAGT+GGG 0.552853 8_4:+7329193 Msa1310700:CDS
CGTGGGTTTGCTGGTAACGT+AGG 0.553424 8_4:-7329314 None:intergenic
GGAAGAGAAGGGACACATGT+TGG 0.554616 8_4:-7334895 None:intergenic
TGTGAGCAATCAGACACAAA+AGG 0.555203 8_4:-7333679 None:intergenic
GGATGCTTCAATGTTTAGAG+TGG 0.556919 8_4:+7329192 Msa1310700:CDS
CGGTATAATATAGCTTTCCG+TGG 0.564453 8_4:-7329332 None:intergenic
TAAGGAGTGGAAGGTTGTTG+TGG 0.564606 8_4:+7328300 Msa1310700:CDS
GATACGAGCAGCATGGAGCT+AGG 0.565557 8_4:-7334927 None:intergenic
GAGTAGCTTCCATTATAATG+AGG 0.567767 8_4:+7328474 Msa1310700:CDS
CAGACACAAAAGGAGGCAAA+CGG 0.568926 8_4:-7333669 None:intergenic
AAAACCCAAACTTGTAAATG+TGG 0.570497 8_4:-7335528 None:intergenic
ATAATGCCATTTCCAAAGAA+GGG 0.571023 8_4:-7335628 None:intergenic
TTATCAATGATTAAAAGAAG+TGG 0.572690 8_4:-7332950 None:intergenic
CATGGAGCTAGGACAGGCGT+TGG 0.573727 8_4:-7334916 None:intergenic
GAGCAGGATCTTCTGGTGCC+GGG 0.573793 8_4:+7330576 Msa1310700:CDS
GGTGGATACACAAATTATGC+AGG 0.577539 8_4:-7335576 None:intergenic
GAGCAGCATGGAGCTAGGAC+AGG 0.579208 8_4:-7334922 None:intergenic
TTATCATGTATACCCGGTAG+AGG 0.580521 8_4:-7327574 None:intergenic
GCATGATACTTATTTCTGCA+AGG 0.580790 8_4:+7327901 Msa1310700:CDS
CTGAAGCTGACAAATATACA+AGG 0.583554 8_4:-7330434 None:intergenic
GGAGTGGAAGGTTGTTGTGG+TGG 0.588628 8_4:+7328303 Msa1310700:CDS
ATCAAACTCCATATATCCAT+CGG 0.589448 8_4:+7332904 Msa1310700:CDS
TTGTTGTGGTGGAAATTGGG+AGG 0.590067 8_4:+7328314 Msa1310700:CDS
TGCATAAACTTAGGTTCCCG+TGG 0.590144 8_4:+7330614 Msa1310700:CDS
GGTTAATCAGCTGAAAGTGT+TGG 0.597636 8_4:+7328240 Msa1310700:CDS
CATCGTTTATCATGTATACC+CGG 0.598104 8_4:-7327580 None:intergenic
GGTATAATATAGCTTTCCGT+GGG 0.599425 8_4:-7329331 None:intergenic
GAGAAGGGACACATGTTGGA+AGG 0.599735 8_4:-7334891 None:intergenic
ATATTGCGAATAAGCAGTTG+AGG 0.600370 8_4:+7328155 Msa1310700:CDS
GGTTCTTGCCACAATTTGTG+AGG 0.602629 8_4:+7330389 Msa1310700:intron
GATATCGCACATAGCTCAGA+AGG 0.603521 8_4:+7327645 Msa1310700:five_prime_UTR
ATAAGAAGTCTCCTTATGAA+GGG 0.605678 8_4:-7334023 None:intergenic
TTAGTCAGAATGGGGCAACT+GGG 0.605739 8_4:+7329255 Msa1310700:CDS
ATCATAAACTGGTGCATACG+AGG 0.606709 8_4:-7334857 None:intergenic
ACGCGCGATTATTTCAGAGA+GGG 0.608878 8_4:+7328115 Msa1310700:CDS
GAATGCACCTCTATCTCCAC+GGG 0.610798 8_4:-7330630 None:intergenic
GACACGCTTGATCCAGTTTG+GGG 0.613664 8_4:+7333984 Msa1310700:CDS
ACACTTTGATACGAGCAGCA+TGG 0.621536 8_4:-7334934 None:intergenic
TTCCTGTTGCTATCGCGAAG+CGG 0.626137 8_4:+7328425 Msa1310700:CDS
AAAACCAAACTATACCTCAC+CGG 0.626934 8_4:-7328373 None:intergenic
AGAATGCACCTCTATCTCCA+CGG 0.631982 8_4:-7330631 None:intergenic
GGACAGGCGTTGGAAGAGAA+GGG 0.633491 8_4:-7334906 None:intergenic
GATGTACGAACCTGGAGCGT+TGG 0.637299 8_4:-7327808 None:intergenic
GCCAGAAACTAATCGAAGCA+GGG 0.637311 8_4:+7327969 Msa1310700:CDS
ACAAGGAGAATACCATCCAA+AGG 0.639783 8_4:-7330417 None:intergenic
TGAAATGTGTCAGTGAAGGA+CGG 0.641080 8_4:-7329352 None:intergenic
AGCAAACAGAAAGCTTGTAG+CGG 0.642799 8_4:-7333742 None:intergenic
CTACGTTACCAGCAAACCCA+CGG 0.646716 8_4:+7329315 Msa1310700:CDS
TAGCGGAGCTGTAAGAAACA+TGG 0.649272 8_4:-7333725 None:intergenic
TTATGAATGTTAGACCGGTG+AGG 0.650686 8_4:+7328359 Msa1310700:CDS
GGTAGAGGATAATTTCACTT+CGG 0.651867 8_4:-7327559 None:intergenic
GCTATGAAATGTGTCAGTGA+AGG 0.656304 8_4:-7329356 None:intergenic
GTAAACGGTAGAAAGTCCGA+TGG 0.658631 8_4:-7332920 None:intergenic
AAGTGAAATTATCCTCTACC+GGG 0.665603 8_4:+7327562 Msa1310700:five_prime_UTR
CACGCGCGATTATTTCAGAG+AGG 0.667953 8_4:+7328114 Msa1310700:CDS
GACTGGTAAAATGAGCCACT+AGG 0.669015 8_4:-7329218 None:intergenic
TTCAAAACTTAGTCAGAATG+GGG 0.671005 8_4:+7329247 Msa1310700:CDS
TGTTTAGAGTGGGAACCTAG+TGG 0.686642 8_4:+7329203 Msa1310700:CDS
TCATCATCATTAAATAACTG+GGG 0.692614 8_4:+7333942 Msa1310700:CDS
GAGCAATCAGACACAAAAGG+AGG 0.705361 8_4:-7333676 None:intergenic
AAATCGGAGAAATTGCGTCG+CGG 0.756221 8_4:+7328005 Msa1310700:CDS
GCGATAGCAACAGGAACACG+CGG 0.771940 8_4:-7328418 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTGTTTTTCATTTTAA+TGG + chr8_4:7330363-7330382 Msa1310700:intron 10.0%
!! AAAGAAATAATTAAAAATCA+CGG + chr8_4:7331147-7331166 Msa1310700:intron 10.0%
!!! ATATTTTGTATGTTTTAAAA+TGG - chr8_4:7331191-7331210 None:intergenic 10.0%
!!! TAATACTTTTTTTTTTCTTT+CGG - chr8_4:7331230-7331249 None:intergenic 10.0%
!!! AAAAAAAGTATTAGAAAAAA+AGG + chr8_4:7331237-7331256 Msa1310700:intron 10.0%
!! ATATAATAAAACAATATCAT+TGG + chr8_4:7331954-7331973 Msa1310700:intron 10.0%
!!! AATTTTTTAGCATAAATTTT+AGG - chr8_4:7334658-7334677 None:intergenic 10.0%
!! ATTTGTTTGAAAATGATAAA+TGG + chr8_4:7328523-7328542 Msa1310700:intron 15.0%
!! TTTGTTTGAAAATGATAAAT+GGG + chr8_4:7328524-7328543 Msa1310700:intron 15.0%
!! GTGCATATATATATAAATTA+TGG - chr8_4:7328996-7329015 None:intergenic 15.0%
!!! TTACCTTTCTTTTTAAATTT+CGG + chr8_4:7329760-7329779 Msa1310700:intron 15.0%
!!! AAATTTTTATCAATAGATAC+CGG + chr8_4:7329971-7329990 Msa1310700:intron 15.0%
!! TTGATATTAAACAGAATAAA+TGG - chr8_4:7330188-7330207 None:intergenic 15.0%
!! ATTTATTCTGTTTAATATCA+AGG + chr8_4:7330187-7330206 Msa1310700:intron 15.0%
!! TTTATTCTGTTTAATATCAA+GGG + chr8_4:7330188-7330207 Msa1310700:intron 15.0%
!! TACATATTAAACAGAATAAA+TGG - chr8_4:7330243-7330262 None:intergenic 15.0%
!!! GTTTGTTTTTCATATATATA+TGG + chr8_4:7330840-7330859 Msa1310700:intron 15.0%
!!! ATTTTAGAGGTAAAAATTAA+AGG + chr8_4:7331119-7331138 Msa1310700:intron 15.0%
!!! TTTTAGAGGTAAAAATTAAA+GGG + chr8_4:7331120-7331139 Msa1310700:intron 15.0%
!!! AATTTTATAATATGGTTATG+TGG - chr8_4:7331323-7331342 None:intergenic 15.0%
!! ACATTATGTATAAATCTTAA+GGG - chr8_4:7331789-7331808 None:intergenic 15.0%
!! TACATTATGTATAAATCTTA+AGG - chr8_4:7331790-7331809 None:intergenic 15.0%
!! GATGAAAAAATTTAGTTAAA+AGG + chr8_4:7332260-7332279 Msa1310700:intron 15.0%
!!! CATAATATACATTCTTTTAT+TGG + chr8_4:7332848-7332867 Msa1310700:intron 15.0%
!!! TGATTTTTTTGTAAATCAAT+AGG - chr8_4:7333194-7333213 None:intergenic 15.0%
!! TTATAGATACAAAAAACAAA+GGG - chr8_4:7333816-7333835 None:intergenic 15.0%
!! TTTATAGATACAAAAAACAA+AGG - chr8_4:7333817-7333836 None:intergenic 15.0%
!! AATTTATAAGATTCTATACT+CGG + chr8_4:7333854-7333873 Msa1310700:intron 15.0%
!! TAACAATGATGAATTAATAT+TGG - chr8_4:7334206-7334225 None:intergenic 15.0%
!!! TTTATTGGTTAAAATTTACA+CGG + chr8_4:7334319-7334338 Msa1310700:intron 15.0%
!!! TTATTTTATTTTTGGTACAA+AGG - chr8_4:7334504-7334523 None:intergenic 15.0%
!! TTCTTGTTAAACTAAAAATA+AGG - chr8_4:7334536-7334555 None:intergenic 15.0%
!! ATAAAAAAAAATATGCTTGT+TGG - chr8_4:7334762-7334781 None:intergenic 15.0%
!!! AATTCATTTTTATCATAAAC+TGG - chr8_4:7334871-7334890 None:intergenic 15.0%
!! ATTCTCATTTCTTTAATTAC+AGG + chr8_4:7327879-7327898 Msa1310700:intron 20.0%
!! TTGTTTGAAAATGATAAATG+GGG + chr8_4:7328525-7328544 Msa1310700:intron 20.0%
!! CAATTTATAAACATGTCATA+AGG - chr8_4:7328634-7328653 None:intergenic 20.0%
!! ATATAAATTATGGACATGTT+TGG - chr8_4:7328986-7329005 None:intergenic 20.0%
!! AACAGTCAAGTTTAATTAAA+CGG + chr8_4:7329026-7329045 Msa1310700:intron 20.0%
!! AATAATCTTAATGCTTAACA+AGG + chr8_4:7329665-7329684 Msa1310700:intron 20.0%
!! TATTAAACAGAATAAATGGT+CGG - chr8_4:7330184-7330203 None:intergenic 20.0%
!! TTAGATATCTTCTATTAACT+AGG + chr8_4:7330458-7330477 Msa1310700:intron 20.0%
!! AATATAATTCCTTTACTGAA+AGG + chr8_4:7330525-7330544 Msa1310700:intron 20.0%
!! CAATAAACAATATCCATTTA+CGG - chr8_4:7330805-7330824 None:intergenic 20.0%
!!! AAAATTACTACTCTAAAACT+TGG - chr8_4:7330969-7330988 None:intergenic 20.0%
!! TTTAGAGGTAAAAATTAAAG+GGG + chr8_4:7331121-7331140 Msa1310700:intron 20.0%
!!! CAACGATGAATTTTATAATA+TGG - chr8_4:7331331-7331350 None:intergenic 20.0%
!! CTACAAAATTTGACATTATT+CGG + chr8_4:7331381-7331400 Msa1310700:intron 20.0%
!! AAATTTGTAATATGATCATG+TGG + chr8_4:7331549-7331568 Msa1310700:intron 20.0%
!!! GTATATTAAATTTGACTTTG+TGG + chr8_4:7331593-7331612 Msa1310700:intron 20.0%
!! AAACACATAACTTTCAATTT+GGG + chr8_4:7331684-7331703 Msa1310700:intron 20.0%
!! AAGAATGTGAAATAGATAAT+CGG + chr8_4:7331840-7331859 Msa1310700:intron 20.0%
!!! GTATAAAATTTAAGATCTCA+GGG + chr8_4:7331976-7331995 Msa1310700:intron 20.0%
!!! GAAATTACACATTCTTTTAA+CGG - chr8_4:7332198-7332217 None:intergenic 20.0%
!!! TAATTTCACATTCTTTTAAC+AGG + chr8_4:7332211-7332230 Msa1310700:intron 20.0%
!!! AATTTCACATTCTTTTAACA+GGG + chr8_4:7332212-7332231 Msa1310700:intron 20.0%
!! GAAAAAATTTAGTTAAAAGG+AGG + chr8_4:7332263-7332282 Msa1310700:intron 20.0%
!! AAAATTGAATACAGTAATGA+AGG - chr8_4:7332427-7332446 None:intergenic 20.0%
!!! TTCATTACTGTATTCAATTT+TGG + chr8_4:7332426-7332445 Msa1310700:intron 20.0%
!! TGACAATTACTTGTTTAAAT+TGG + chr8_4:7332638-7332657 Msa1310700:intron 20.0%
!! ATAACTAATGTTAAATCCTT+GGG - chr8_4:7332745-7332764 None:intergenic 20.0%
!! TTATCAATGATTAAAAGAAG+TGG - chr8_4:7332953-7332972 None:intergenic 20.0%
!!! TAGATTTTTCGTTGAATATT+TGG - chr8_4:7333306-7333325 None:intergenic 20.0%
!! AATATTCAACGAAAAATCTA+TGG + chr8_4:7333306-7333325 Msa1310700:intron 20.0%
!! AAAACAAAGGGAAAAAAATA+AGG - chr8_4:7333804-7333823 None:intergenic 20.0%
!!! AAGTACTGCATTTTTAATAA+TGG - chr8_4:7334263-7334282 None:intergenic 20.0%
!!! TTCATCATACTCTTATTTAT+TGG + chr8_4:7334304-7334323 Msa1310700:intron 20.0%
!!! TTATTGGTTAAAATTTACAC+GGG + chr8_4:7334320-7334339 Msa1310700:intron 20.0%
!! TTAGTTTAACAAGAAATAAC+TGG + chr8_4:7334541-7334560 Msa1310700:intron 20.0%
!! TAGTTTAACAAGAAATAACT+GGG + chr8_4:7334542-7334561 Msa1310700:intron 20.0%
!!! GATTTTGGAGAATTTTTTGT+CGG - chr8_4:7327771-7327790 None:intergenic 25.0%
! AAGAAATGAGAATGCAATTA+GGG - chr8_4:7327872-7327891 None:intergenic 25.0%
! AAAGAAATGAGAATGCAATT+AGG - chr8_4:7327873-7327892 None:intergenic 25.0%
! TAAGCATTTGTTTAAGTATG+TGG + chr8_4:7328591-7328610 Msa1310700:intron 25.0%
!! TTTTCATCTTGGATAACTTA+AGG - chr8_4:7328854-7328873 None:intergenic 25.0%
!!! ATTCTTTATTTGCTTTTCCA+TGG + chr8_4:7329401-7329420 Msa1310700:intron 25.0%
! ACCTAGATTACTAGTATAAT+AGG - chr8_4:7329574-7329593 None:intergenic 25.0%
! CATAATAACGTTCATAATGA+TGG + chr8_4:7329641-7329660 Msa1310700:intron 25.0%
! TGTCCGAAATTTAAAAAGAA+AGG - chr8_4:7329766-7329785 None:intergenic 25.0%
! AAGACATAAAAGAAATGATG+GGG - chr8_4:7329909-7329928 None:intergenic 25.0%
! CAAGACATAAAAGAAATGAT+GGG - chr8_4:7329910-7329929 None:intergenic 25.0%
! TCAAGACATAAAAGAAATGA+TGG - chr8_4:7329911-7329930 None:intergenic 25.0%
! ATTAAACAGAATAAATGGTC+GGG - chr8_4:7330183-7330202 None:intergenic 25.0%
!!! CAAAGGTGTTAAGAAAATTT+AGG + chr8_4:7330212-7330231 Msa1310700:intron 25.0%
! TATTAAACAGAATAAATGGC+CGG - chr8_4:7330239-7330258 None:intergenic 25.0%
!!! TGTTTTTCATTTTAATGGCT+AGG + chr8_4:7330368-7330387 Msa1310700:intron 25.0%
! TCCAATAACTAATCTAACAA+GGG - chr8_4:7330750-7330769 None:intergenic 25.0%
! TTCCAATAACTAATCTAACA+AGG - chr8_4:7330751-7330770 None:intergenic 25.0%
!!! ATATATGGTATTTTAACCAG+TGG + chr8_4:7330855-7330874 Msa1310700:intron 25.0%
! TATATATATTTGTGTGTGTG+TGG + chr8_4:7330935-7330954 Msa1310700:intron 25.0%
! ATATATATTTGTGTGTGTGT+GGG + chr8_4:7330936-7330955 Msa1310700:intron 25.0%
!! AATGCAACTAATCATTTTAG+AGG + chr8_4:7331106-7331125 Msa1310700:intron 25.0%
! AATTAAAAATCACGGTGAAA+AGG + chr8_4:7331155-7331174 Msa1310700:intron 25.0%
! CATTGAAAGTTATTATCACA+TGG + chr8_4:7331351-7331370 Msa1310700:intron 25.0%
! CAAACACATAACTTTCAATT+TGG + chr8_4:7331683-7331702 Msa1310700:intron 25.0%
! CAAAACTATACTATTAGGTA+AGG + chr8_4:7331877-7331896 Msa1310700:intron 25.0%
!! TTATTATATTTTGCATACCC+TGG - chr8_4:7331943-7331962 None:intergenic 25.0%
!! GGTATAAAATTTAAGATCTC+AGG + chr8_4:7331975-7331994 Msa1310700:intron 25.0%
! TAATGAAAAAAAACTAACGC+TGG - chr8_4:7332157-7332176 None:intergenic 25.0%
!!! AGCGTTAGTTTTTTTTCATT+AGG + chr8_4:7332156-7332175 Msa1310700:intron 25.0%
!! CTTTTTACAAGAAAGATTAC+AGG - chr8_4:7332307-7332326 None:intergenic 25.0%
! AGATCAAATTCATGATTTCT+GGG + chr8_4:7332341-7332360 Msa1310700:intron 25.0%
! CATAACTAATGTTAAATCCT+TGG - chr8_4:7332746-7332765 None:intergenic 25.0%
! CAAGGATTTAACATTAGTTA+TGG + chr8_4:7332744-7332763 Msa1310700:intron 25.0%
! CATAATACAAATTTATACGC+TGG - chr8_4:7332814-7332833 None:intergenic 25.0%
!!! GAAAGTATTAACCGTAAAAA+TGG + chr8_4:7333149-7333168 Msa1310700:intron 25.0%
!!! GCATTCAATAACCATTTTTA+CGG - chr8_4:7333163-7333182 None:intergenic 25.0%
!! ATCATAAATTTAGAGCTAGA+TGG + chr8_4:7333210-7333229 Msa1310700:intron 25.0%
! TATAGAATGATGTAAGATAG+CGG - chr8_4:7333393-7333412 None:intergenic 25.0%
!! ACATCATTCTATAGTGTTTT+TGG + chr8_4:7333400-7333419 Msa1310700:intron 25.0%
!! CATCATTCTATAGTGTTTTT+GGG + chr8_4:7333401-7333420 Msa1310700:intron 25.0%
!!! ATCATTCTATAGTGTTTTTG+GGG + chr8_4:7333402-7333421 Msa1310700:intron 25.0%
!! ATCTATTCAAGTTTAACAGT+AGG + chr8_4:7333481-7333500 Msa1310700:intron 25.0%
!!! AGCAACTTAATTTTGATTTC+AGG + chr8_4:7333890-7333909 Msa1310700:intron 25.0%
! TGTCATCATCATTAAATAAC+TGG + chr8_4:7333940-7333959 Msa1310700:CDS 25.0%
! GTCATCATCATTAAATAACT+GGG + chr8_4:7333941-7333960 Msa1310700:CDS 25.0%
! TCATCATCATTAAATAACTG+GGG + chr8_4:7333942-7333961 Msa1310700:CDS 25.0%
! AACAGAAAACTGAGAATTAT+GGG - chr8_4:7334120-7334139 None:intergenic 25.0%
! ACAATTTCTATTCTTTGTCA+TGG + chr8_4:7334587-7334606 Msa1310700:intron 25.0%
!!! AACTAGGAGAAAGTTTTATA+TGG + chr8_4:7335326-7335345 Msa1310700:three_prime_UTR 25.0%
! AATACCACATTTACAAGTTT+GGG + chr8_4:7335524-7335543 Msa1310700:three_prime_UTR 25.0%
!!! TTTTTTTTCTGCATCATTTG+TGG + chr8_4:7335547-7335566 Msa1310700:three_prime_UTR 25.0%
! AAGAAGAAAAAAACACATGT+TGG - chr8_4:7335600-7335619 None:intergenic 25.0%
! ATAAGGTAAGTCTCTGATTT+TGG - chr8_4:7327786-7327805 None:intergenic 30.0%
TCAAAGTCTACACACAATTA+TGG + chr8_4:7327927-7327946 Msa1310700:CDS 30.0%
! GTTTGTGGATAGTGATTTTA+AGG + chr8_4:7328282-7328301 Msa1310700:CDS 30.0%
CATTGTCTACCTCATTATAA+TGG - chr8_4:7328486-7328505 None:intergenic 30.0%
!! CCTTATTTCTACAATCAAAG+AGG - chr8_4:7328716-7328735 None:intergenic 30.0%
CCTCTTTGATTGTAGAAATA+AGG + chr8_4:7328713-7328732 Msa1310700:intron 30.0%
! TTATTGATTGTGGAGTACTT+GGG - chr8_4:7329056-7329075 None:intergenic 30.0%
! AAAACCTACCTTATTGATTG+TGG - chr8_4:7329066-7329085 None:intergenic 30.0%
TTACTGTCTGTAACATGTTA+TGG + chr8_4:7329086-7329105 Msa1310700:intron 30.0%
! AGTTCACTATTGACACTTTT+AGG + chr8_4:7329171-7329190 Msa1310700:CDS 30.0%
GTTCAAAACTTAGTCAGAAT+GGG + chr8_4:7329246-7329265 Msa1310700:CDS 30.0%
TTCAAAACTTAGTCAGAATG+GGG + chr8_4:7329247-7329266 Msa1310700:CDS 30.0%
ACATTTCATAGCTGTAAGTA+TGG + chr8_4:7329367-7329386 Msa1310700:intron 30.0%
GATTTGATACAAGAACTACT+GGG - chr8_4:7329428-7329447 None:intergenic 30.0%
TGATTTGATACAAGAACTAC+TGG - chr8_4:7329429-7329448 None:intergenic 30.0%
!!! TTTTCTTTGAGACCAAATAG+CGG - chr8_4:7329478-7329497 None:intergenic 30.0%
GCCTATTATACTAGTAATCT+AGG + chr8_4:7329570-7329589 Msa1310700:intron 30.0%
! ATTTTCTCTTAGGGTATGTT+TGG + chr8_4:7329708-7329727 Msa1310700:intron 30.0%
AGACATAAAAGAAATGATGG+GGG - chr8_4:7329908-7329927 None:intergenic 30.0%
GTCTTGAAAGAAATGAACAA+TGG + chr8_4:7329924-7329943 Msa1310700:intron 30.0%
TACCTCTAACATGTAATGTA+GGG + chr8_4:7330005-7330024 Msa1310700:intron 30.0%
GATGCTAAAAACAGTAATCA+AGG - chr8_4:7330041-7330060 None:intergenic 30.0%
! CATGTTTAAAACAAGAAAGC+AGG - chr8_4:7330089-7330108 None:intergenic 30.0%
!!! CTGCTTTCTTGTTTTAAACA+TGG + chr8_4:7330087-7330106 Msa1310700:intron 30.0%
ATCCTCCCAAAAAATATCAA+GGG + chr8_4:7330133-7330152 Msa1310700:intron 30.0%
!!! TTCGTCCCTTGATATTTTTT+GGG - chr8_4:7330141-7330160 None:intergenic 30.0%
!! ACGAAGGTGTTAAGAAAATT+TGG + chr8_4:7330156-7330175 Msa1310700:intron 30.0%
TGTTTAATATCAAGGGACAA+AGG + chr8_4:7330195-7330214 Msa1310700:intron 30.0%
ATTAAACAGAATAAATGGCC+GGG - chr8_4:7330238-7330257 None:intergenic 30.0%
! ATTTCTTCCATTCTTTTTCC+TGG + chr8_4:7330322-7330341 Msa1310700:intron 30.0%
ATACTCAAAATTTGCAATCC+AGG - chr8_4:7330343-7330362 None:intergenic 30.0%
! ACCCTTGTTAGATTAGTTAT+TGG + chr8_4:7330746-7330765 Msa1310700:intron 30.0%
AAACAATATCCATTTACGGT+GGG - chr8_4:7330801-7330820 None:intergenic 30.0%
TAAACAATATCCATTTACGG+TGG - chr8_4:7330802-7330821 None:intergenic 30.0%
! AAAACAAACACGTGTTTTCT+TGG - chr8_4:7330829-7330848 None:intergenic 30.0%
!! AGTTGAGCTGATTTTAATGA+TGG - chr8_4:7331002-7331021 None:intergenic 30.0%
!!! CATGAGTTTTATTTGATCGT+TGG - chr8_4:7331072-7331091 None:intergenic 30.0%
GTTATGATCAATTGACACAA+TGG + chr8_4:7331259-7331278 Msa1310700:intron 30.0%
ATGTGGTAAAGAATTATCGA+AGG + chr8_4:7331566-7331585 Msa1310700:intron 30.0%
ACTTTCAATTTGGGTGAATT+TGG + chr8_4:7331693-7331712 Msa1310700:intron 30.0%
TAAAATGTAGAACTTGGGAA+GGG - chr8_4:7331766-7331785 None:intergenic 30.0%
AAGGGTAAAATGTAGAACTT+GGG - chr8_4:7331771-7331790 None:intergenic 30.0%
TAAGGGTAAAATGTAGAACT+TGG - chr8_4:7331772-7331791 None:intergenic 30.0%
AGGTGCAAAACTATACTATT+AGG + chr8_4:7331872-7331891 Msa1310700:intron 30.0%
AATAACAGCTAAAATCCATG+GGG - chr8_4:7332067-7332086 None:intergenic 30.0%
CAATAACAGCTAAAATCCAT+GGG - chr8_4:7332068-7332087 None:intergenic 30.0%
TCAATAACAGCTAAAATCCA+TGG - chr8_4:7332069-7332088 None:intergenic 30.0%
AAAAACTAACGCTGGAAAAA+TGG - chr8_4:7332149-7332168 None:intergenic 30.0%
TGTAAAAAGAGAGAAGATTG+TGG + chr8_4:7332318-7332337 Msa1310700:intron 30.0%
GAGATCAAATTCATGATTTC+TGG + chr8_4:7332340-7332359 Msa1310700:intron 30.0%
ATGAATAGCTTGGAATCATT+GGG + chr8_4:7332668-7332687 Msa1310700:intron 30.0%
!! GTGCGTTAATTTGCTTAAAT+AGG + chr8_4:7332690-7332709 Msa1310700:intron 30.0%
AATACAAATTTATACGCTGG+AGG - chr8_4:7332811-7332830 None:intergenic 30.0%
ATCAAACTCCATATATCCAT+CGG + chr8_4:7332904-7332923 Msa1310700:CDS 30.0%
GAAAAATGACTGAAGTAGTA+GGG - chr8_4:7333003-7333022 None:intergenic 30.0%
AGAAAAATGACTGAAGTAGT+AGG - chr8_4:7333004-7333023 None:intergenic 30.0%
! TTCAAGTTTAACAGTAGGTA+TGG + chr8_4:7333486-7333505 Msa1310700:intron 30.0%
TGTGTTGTAAGATGTGAATA+TGG - chr8_4:7333568-7333587 None:intergenic 30.0%
ATTGCTCACATTCTTCAAAT+GGG + chr8_4:7333692-7333711 Msa1310700:CDS 30.0%
ATCATTAAATAACTGGGGAT+TGG + chr8_4:7333947-7333966 Msa1310700:CDS 30.0%
ATAAGAAGTCTCCTTATGAA+GGG - chr8_4:7334026-7334045 None:intergenic 30.0%
GAACAGAAAACTGAGAATTA+TGG - chr8_4:7334121-7334140 None:intergenic 30.0%
AGTATTTCTCACAAGTTGTA+TGG - chr8_4:7334156-7334175 None:intergenic 30.0%
TAAAAATGCAGTACTTATCC+AGG + chr8_4:7334267-7334286 Msa1310700:intron 30.0%
! TGCAAGCAACATTCTTTTAT+CGG - chr8_4:7334400-7334419 None:intergenic 30.0%
AAGGTAGGAAACAAAAACAT+AGG - chr8_4:7334804-7334823 None:intergenic 30.0%
!! ACGTTTGGAAGTGTATTTTT+AGG - chr8_4:7335024-7335043 None:intergenic 30.0%
TAAAAATACACTTCCAAACG+TGG + chr8_4:7335023-7335042 Msa1310700:CDS 30.0%
! TTATAGCATTTTAAGCAGCA+AGG + chr8_4:7335058-7335077 Msa1310700:three_prime_UTR 30.0%
! TATAGCATTTTAAGCAGCAA+GGG + chr8_4:7335059-7335078 Msa1310700:three_prime_UTR 30.0%
TTCTTGCTTATCTAGGAAAT+TGG - chr8_4:7335087-7335106 None:intergenic 30.0%
TTCCTATCAACATCACAATT+TGG + chr8_4:7335164-7335183 Msa1310700:three_prime_UTR 30.0%
TCGTGTAATAATTCAAGTGA+AGG + chr8_4:7335199-7335218 Msa1310700:three_prime_UTR 30.0%
TTGACCAAAAACAAAGAGAA+AGG + chr8_4:7335230-7335249 Msa1310700:three_prime_UTR 30.0%
CAAGATTATAGAACAGAACT+AGG + chr8_4:7335310-7335329 Msa1310700:three_prime_UTR 30.0%
TATTTCTTCCATGAAGATGT+TGG + chr8_4:7335457-7335476 Msa1310700:three_prime_UTR 30.0%
CAATACCACATTTACAAGTT+TGG + chr8_4:7335523-7335542 Msa1310700:three_prime_UTR 30.0%
AAAACCCAAACTTGTAAATG+TGG - chr8_4:7335531-7335550 None:intergenic 30.0%
AAGAAAAAAACACATGTTGG+TGG - chr8_4:7335597-7335616 None:intergenic 30.0%
! ATAATGCCATTTCCAAAGAA+GGG - chr8_4:7335631-7335650 None:intergenic 30.0%
! AATAATGCCATTTCCAAAGA+AGG - chr8_4:7335632-7335651 None:intergenic 30.0%
GGTAGAGGATAATTTCACTT+CGG - chr8_4:7327562-7327581 None:intergenic 35.0%
GAAGTGAAATTATCCTCTAC+CGG + chr8_4:7327561-7327580 Msa1310700:five_prime_UTR 35.0%
AAGTGAAATTATCCTCTACC+GGG + chr8_4:7327562-7327581 Msa1310700:five_prime_UTR 35.0%
CATCGTTTATCATGTATACC+CGG - chr8_4:7327583-7327602 None:intergenic 35.0%
GTTGAAGAAGAAGACGAAAA+TGG + chr8_4:7327667-7327686 Msa1310700:exon 35.0%
GAAAAGAGGAATTAGGGTTA+GGG - chr8_4:7327840-7327859 None:intergenic 35.0%
TGAAAAGAGGAATTAGGGTT+AGG - chr8_4:7327841-7327860 None:intergenic 35.0%
GGGTTTGAAAAGAGGAATTA+GGG - chr8_4:7327846-7327865 None:intergenic 35.0%
AGGGTTTGAAAAGAGGAATT+AGG - chr8_4:7327847-7327866 None:intergenic 35.0%
!! GCATGATACTTATTTCTGCA+AGG + chr8_4:7327901-7327920 Msa1310700:CDS 35.0%
!!! CGGATTGGTCAATTGTATTT+TGG + chr8_4:7328025-7328044 Msa1310700:CDS 35.0%
! TTTCAGAGAGGGATTGTTTT+CGG + chr8_4:7328126-7328145 Msa1310700:CDS 35.0%
ATATTGCGAATAAGCAGTTG+AGG + chr8_4:7328155-7328174 Msa1310700:CDS 35.0%
! GAATAAGCAGTTGAGGTTTT+TGG + chr8_4:7328162-7328181 Msa1310700:CDS 35.0%
!!! GTTTTTGGCGAGGTTTTTAA+CGG + chr8_4:7328177-7328196 Msa1310700:CDS 35.0%
!! TGGATAGTGATTTTAAGGAG+TGG + chr8_4:7328287-7328306 Msa1310700:CDS 35.0%
!! TAGTGATTTTAAGGAGTGGA+AGG + chr8_4:7328291-7328310 Msa1310700:CDS 35.0%
!!! GAGGTTTTTGAAGGTTGATA+CGG + chr8_4:7328333-7328352 Msa1310700:CDS 35.0%
!!! AGGTTTTTGAAGGTTGATAC+GGG + chr8_4:7328334-7328353 Msa1310700:CDS 35.0%
!! GGGTTTTATGAATGTTAGAC+CGG + chr8_4:7328354-7328373 Msa1310700:CDS 35.0%
AAAACCAAACTATACCTCAC+CGG - chr8_4:7328376-7328395 None:intergenic 35.0%
GAGTAGCTTCCATTATAATG+AGG + chr8_4:7328474-7328493 Msa1310700:CDS 35.0%
TAAGTATGTGGATGAGCTTA+TGG + chr8_4:7328603-7328622 Msa1310700:intron 35.0%
AGCTTATACAGAGTTTATGC+AGG + chr8_4:7328686-7328705 Msa1310700:intron 35.0%
!! GCTATAAGCTGTTTTCATCT+TGG - chr8_4:7328865-7328884 None:intergenic 35.0%
! CTTATTGATTGTGGAGTACT+TGG - chr8_4:7329057-7329076 None:intergenic 35.0%
CAAGTACTCCACAATCAATA+AGG + chr8_4:7329055-7329074 Msa1310700:intron 35.0%
TACTCCACAATCAATAAGGT+AGG + chr8_4:7329059-7329078 Msa1310700:intron 35.0%
GATTGTGATGATTACTGAAC+AGG + chr8_4:7329136-7329155 Msa1310700:intron 35.0%
! GATGCTTCAATGTTTAGAGT+GGG + chr8_4:7329193-7329212 Msa1310700:CDS 35.0%
GGTTCAAAACTTAGTCAGAA+TGG + chr8_4:7329245-7329264 Msa1310700:CDS 35.0%
GGTATAATATAGCTTTCCGT+GGG - chr8_4:7329334-7329353 None:intergenic 35.0%
TTGATTCCATTCAATGACTG+AGG + chr8_4:7329450-7329469 Msa1310700:intron 35.0%
GCTATTTGGTCTCAAAGAAA+AGG + chr8_4:7329477-7329496 Msa1310700:intron 35.0%
AATGCTTAACAAGGCCAAAT+TGG + chr8_4:7329674-7329693 Msa1310700:intron 35.0%
! TTCCCTCACATTTTCTCTTA+GGG + chr8_4:7329699-7329718 Msa1310700:intron 35.0%
TACCCTAAGAGAAAATGTGA+GGG - chr8_4:7329704-7329723 None:intergenic 35.0%
ATACCCTAAGAGAAAATGTG+AGG - chr8_4:7329705-7329724 None:intergenic 35.0%
!! AAAGAAATGATGGGGGTTTT+TGG - chr8_4:7329901-7329920 None:intergenic 35.0%
CTACCTCTAACATGTAATGT+AGG + chr8_4:7330004-7330023 Msa1310700:intron 35.0%
ATGAATTCTCATGAAGGGAT+AGG - chr8_4:7330063-7330082 None:intergenic 35.0%
!!! TATTTTTTGGGAGGATGTGA+GGG - chr8_4:7330129-7330148 None:intergenic 35.0%
!!! ATATTTTTTGGGAGGATGTG+AGG - chr8_4:7330130-7330149 None:intergenic 35.0%
CATCCTCCCAAAAAATATCA+AGG + chr8_4:7330132-7330151 Msa1310700:intron 35.0%
!!! CTTCGTCCCTTGATATTTTT+TGG - chr8_4:7330142-7330161 None:intergenic 35.0%
CAAAAAATATCAAGGGACGA+AGG + chr8_4:7330140-7330159 Msa1310700:intron 35.0%
GTGTTAAGAAAATTTAGGCC+CGG + chr8_4:7330217-7330236 Msa1310700:intron 35.0%
CTGCTTTCAACTAGAAGAAA+GGG + chr8_4:7330279-7330298 Msa1310700:intron 35.0%
TGCTTTCAACTAGAAGAAAG+GGG + chr8_4:7330280-7330299 Msa1310700:intron 35.0%
TTGCAATCCAGGAAAAAGAA+TGG - chr8_4:7330332-7330351 None:intergenic 35.0%
CTGAAGCTGACAAATATACA+AGG - chr8_4:7330437-7330456 None:intergenic 35.0%
CTTGTATATTTGTCAGCTTC+AGG + chr8_4:7330435-7330454 Msa1310700:CDS 35.0%
CTAAAAGACTGTAAATGCGT+AGG + chr8_4:7330482-7330501 Msa1310700:intron 35.0%
CAAAGTTCACCTTTCAGTAA+AGG - chr8_4:7330537-7330556 None:intergenic 35.0%
TTGCTTTCTACATCAAATGC+AGG + chr8_4:7330554-7330573 Msa1310700:intron 35.0%
GAATCTGGTTGCATAAACTT+AGG + chr8_4:7330605-7330624 Msa1310700:CDS 35.0%
AACAATATCCATTTACGGTG+GGG - chr8_4:7330800-7330819 None:intergenic 35.0%
!!! TATGGTATTTTAACCAGTGG+TGG + chr8_4:7330858-7330877 Msa1310700:intron 35.0%
GTAAAATGTAGAACTTGGGA+AGG - chr8_4:7331767-7331786 None:intergenic 35.0%
TGAAATAGATAATCGGCAGT+TGG + chr8_4:7331847-7331866 Msa1310700:intron 35.0%
! TTGCATACCCTGGAATTTTT+GGG - chr8_4:7331933-7331952 None:intergenic 35.0%
! TTTGCATACCCTGGAATTTT+TGG - chr8_4:7331934-7331953 None:intergenic 35.0%
CGAGTAGCAGTTAAAATCAA+GGG - chr8_4:7332038-7332057 None:intergenic 35.0%
ACGAGTAGCAGTTAAAATCA+AGG - chr8_4:7332039-7332058 None:intergenic 35.0%
! TGCTTTGCTTGCATTCTTTT+TGG + chr8_4:7332238-7332257 Msa1310700:intron 35.0%
! AAAAGGAGGAAGTACAAGAT+TGG + chr8_4:7332277-7332296 Msa1310700:intron 35.0%
AGTAATGAAGGCAGATAACA+AGG - chr8_4:7332415-7332434 None:intergenic 35.0%
TACCTATCTTCTCAAGCATT+TGG + chr8_4:7332544-7332563 Msa1310700:intron 35.0%
TTCTCAAGCATTTGGAGAAT+TGG + chr8_4:7332552-7332571 Msa1310700:intron 35.0%
ATAAACAAAACCACTACGAC+CGG - chr8_4:7332594-7332613 None:intergenic 35.0%
CAGAACACTTCACATTGTAT+GGG - chr8_4:7332620-7332639 None:intergenic 35.0%
TCAGAACACTTCACATTGTA+TGG - chr8_4:7332621-7332640 None:intergenic 35.0%
TGATTCCAAGCTATTCATGA+AGG - chr8_4:7332666-7332685 None:intergenic 35.0%
CATGAATAGCTTGGAATCAT+TGG + chr8_4:7332667-7332686 Msa1310700:intron 35.0%
! CACTAACACAATTCCTTTTC+AGG + chr8_4:7332881-7332900 Msa1310700:intron 35.0%
TATGGAGTTTGATCCTGAAA+AGG - chr8_4:7332897-7332916 None:intergenic 35.0%
TAGAAAGTCCGATGGATATA+TGG - chr8_4:7332915-7332934 None:intergenic 35.0%
AGAAGTGGTCTTCTAGTAAA+CGG - chr8_4:7332938-7332957 None:intergenic 35.0%
! TGAGAACAGCAAAGCTTTTA+AGG + chr8_4:7332973-7332992 Msa1310700:CDS 35.0%
! ACCAAAGTCTAGGGTAAAAT+TGG - chr8_4:7333092-7333111 None:intergenic 35.0%
! AATTTTACCCTAGACTTTGG+TGG + chr8_4:7333091-7333110 Msa1310700:intron 35.0%
! ATTTTACCCTAGACTTTGGT+GGG + chr8_4:7333092-7333111 Msa1310700:intron 35.0%
TTAATTCCCACCAAAGTCTA+GGG - chr8_4:7333101-7333120 None:intergenic 35.0%
ATTAATTCCCACCAAAGTCT+AGG - chr8_4:7333102-7333121 None:intergenic 35.0%
CATTAATGCCACATCATTGT+AGG - chr8_4:7333269-7333288 None:intergenic 35.0%
TGTGGCATTAATGATGTCAA+AGG + chr8_4:7333276-7333295 Msa1310700:intron 35.0%
!!! TTCTATAGTGTTTTTGGGGT+TGG + chr8_4:7333406-7333425 Msa1310700:intron 35.0%
TATCAGTCAATTCCAGATAG+AGG - chr8_4:7333442-7333461 None:intergenic 35.0%
CATCTTACAACACACTTAAC+AGG + chr8_4:7333574-7333593 Msa1310700:intron 35.0%
GTCATAACTGAAGCAGAAAA+AGG + chr8_4:7333616-7333635 Msa1310700:CDS 35.0%
GATTGCTCACATTCTTCAAA+TGG + chr8_4:7333691-7333710 Msa1310700:CDS 35.0%
CTGTAAGAAACATGGTGAAT+AGG - chr8_4:7333720-7333739 None:intergenic 35.0%
!! TTCAGGCACTGATATTGATT+TGG + chr8_4:7333774-7333793 Msa1310700:CDS 35.0%
! ATTAAGTTGCTGAATGCTGA+AGG - chr8_4:7333881-7333900 None:intergenic 35.0%
CATAAGAAGTCTCCTTATGA+AGG - chr8_4:7334027-7334046 None:intergenic 35.0%
TCATAAGGAGACTTCTTATG+AGG + chr8_4:7334027-7334046 Msa1310700:CDS 35.0%
TTGGCACAAGCAAAATAGAA+GGG - chr8_4:7334187-7334206 None:intergenic 35.0%
ATTGGCACAAGCAAAATAGA+AGG - chr8_4:7334188-7334207 None:intergenic 35.0%
! ATCTGCCTCCCATATAATTT+TGG + chr8_4:7334355-7334374 Msa1310700:intron 35.0%
GTGTCCCACCAAAATTATAT+GGG - chr8_4:7334366-7334385 None:intergenic 35.0%
TGTGTCCCACCAAAATTATA+TGG - chr8_4:7334367-7334386 None:intergenic 35.0%
TATTGTGCAATTGTGCCATA+TGG + chr8_4:7334435-7334454 Msa1310700:intron 35.0%
AGGGGAAAAAAACTTCCATA+TGG - chr8_4:7334453-7334472 None:intergenic 35.0%
! TTCTAGCTGGATGAATTAGA+GGG - chr8_4:7334472-7334491 None:intergenic 35.0%
! ATTCTAGCTGGATGAATTAG+AGG - chr8_4:7334473-7334492 None:intergenic 35.0%
AAGGATGTTCAAATTCTAGC+TGG - chr8_4:7334485-7334504 None:intergenic 35.0%
! CTTTTACACCATGTTATGAC+AGG + chr8_4:7334690-7334709 Msa1310700:intron 35.0%
CAAAATATGAATCTGGACGA+AGG - chr8_4:7334823-7334842 None:intergenic 35.0%
TGTCTGGCAAAATATGAATC+TGG - chr8_4:7334830-7334849 None:intergenic 35.0%
! TAAGCACTTCATCTTTTCTG+AGG + chr8_4:7334990-7335009 Msa1310700:CDS 35.0%
AGTGAAGTTCTTGCTTATCT+AGG - chr8_4:7335094-7335113 None:intergenic 35.0%
! CAGAAGCACATAATGTATAC+AGG + chr8_4:7335115-7335134 Msa1310700:three_prime_UTR 35.0%
GACCAAATTGTGATGTTGAT+AGG - chr8_4:7335169-7335188 None:intergenic 35.0%
! TGCAGTGAAAGGGTATAAAA+TGG - chr8_4:7335377-7335396 None:intergenic 35.0%
! TCTTCTTTTCTTCCCTTCTT+TGG + chr8_4:7335616-7335635 Msa1310700:three_prime_UTR 35.0%
! TTTCTTCCCTTCTTTGGAAA+TGG + chr8_4:7335622-7335641 Msa1310700:three_prime_UTR 35.0%
TTATCATGTATACCCGGTAG+AGG - chr8_4:7327577-7327596 None:intergenic 40.0%
!!! CTACGACGTCTTTTTTGCAA+CGG - chr8_4:7327610-7327629 None:intergenic 40.0%
TGCAAAAAAGACGTCGTAGA+AGG + chr8_4:7327611-7327630 Msa1310700:five_prime_UTR 40.0%
TCCAGAAAACTTCGCTTACT+GGG - chr8_4:7327733-7327752 None:intergenic 40.0%
TGAGAATGCAATTAGGGCTA+GGG - chr8_4:7327866-7327885 None:intergenic 40.0%
ATGAGAATGCAATTAGGGCT+AGG - chr8_4:7327867-7327886 None:intergenic 40.0%
!!! GTTTCTGGCGATTTTCTTGT+TGG - chr8_4:7327958-7327977 None:intergenic 40.0%
GGGTTGAAAAGATGGGAAAT+CGG + chr8_4:7327989-7328008 Msa1310700:CDS 40.0%
!! CGGTGTGTTTGCTTTTGAAT+CGG + chr8_4:7328197-7328216 Msa1310700:CDS 40.0%
!! TGTGTTTGCTTTTGAATCGG+AGG + chr8_4:7328200-7328219 Msa1310700:CDS 40.0%
!! GTGTTTGCTTTTGAATCGGA+GGG + chr8_4:7328201-7328220 Msa1310700:CDS 40.0%
GAGGGAAATGTTGCAACAAT+TGG + chr8_4:7328219-7328238 Msa1310700:CDS 40.0%
! GGTTAATCAGCTGAAAGTGT+TGG + chr8_4:7328240-7328259 Msa1310700:CDS 40.0%
!! TGAGTGTAAGAGAGTGTTTG+TGG + chr8_4:7328267-7328286 Msa1310700:CDS 40.0%
! AAGGTTGTTGTGGTGGAAAT+TGG + chr8_4:7328310-7328329 Msa1310700:CDS 40.0%
! AGGTTGTTGTGGTGGAAATT+GGG + chr8_4:7328311-7328330 Msa1310700:CDS 40.0%
! GGAAATTGGGAGGTTTTTGA+AGG + chr8_4:7328324-7328343 Msa1310700:CDS 40.0%
TTATGAATGTTAGACCGGTG+AGG + chr8_4:7328359-7328378 Msa1310700:CDS 40.0%
!! GGTGAGGTATAGTTTGGTTT+TGG + chr8_4:7328375-7328394 Msa1310700:CDS 40.0%
GAAAATGATAAATGGGGCGT+TGG + chr8_4:7328531-7328550 Msa1310700:intron 40.0%
! TATTTCTACAAGCTAGCCAG+GGG - chr8_4:7328667-7328686 None:intergenic 40.0%
!! CTATTTCTACAAGCTAGCCA+GGG - chr8_4:7328668-7328687 None:intergenic 40.0%
TAAGCACTTGTGAGACTGTT+TGG + chr8_4:7328774-7328793 Msa1310700:intron 40.0%
AAGCACTTGTGAGACTGTTT+GGG + chr8_4:7328775-7328794 Msa1310700:intron 40.0%
GGATGCTTCAATGTTTAGAG+TGG + chr8_4:7329192-7329211 Msa1310700:CDS 40.0%
!!! TAAGTTTTGAACCACCAGAC+TGG - chr8_4:7329238-7329257 None:intergenic 40.0%
CGGTATAATATAGCTTTCCG+TGG - chr8_4:7329335-7329354 None:intergenic 40.0%
TGAAATGTGTCAGTGAAGGA+CGG - chr8_4:7329355-7329374 None:intergenic 40.0%
GCTATGAAATGTGTCAGTGA+AGG - chr8_4:7329359-7329378 None:intergenic 40.0%
AACTCAATGCTGTGCATTCA+AGG - chr8_4:7329546-7329565 None:intergenic 40.0%
AATGTGAGGGAAGACCAATT+TGG - chr8_4:7329691-7329710 None:intergenic 40.0%
! CTTCCCTCACATTTTCTCTT+AGG + chr8_4:7329698-7329717 Msa1310700:intron 40.0%
TCTCTTAGGGTATGTTTGGA+TGG + chr8_4:7329712-7329731 Msa1310700:intron 40.0%
TTAGGGTATGTTTGGATGGA+GGG + chr8_4:7329716-7329735 Msa1310700:intron 40.0%
TATGTTTGGATGGAGGGTTT+AGG + chr8_4:7329722-7329741 Msa1310700:intron 40.0%
!! AAATGATGGGGGTTTTTGGA+GGG - chr8_4:7329897-7329916 None:intergenic 40.0%
TAGAGGTAGTCAACTTCTTC+CGG - chr8_4:7329993-7330012 None:intergenic 40.0%
GTCCCTACATTACATGTTAG+AGG - chr8_4:7330010-7330029 None:intergenic 40.0%
!!! ATTTTTTGGGAGGATGTGAG+GGG - chr8_4:7330128-7330147 None:intergenic 40.0%
!!! GTCCCTTGATATTTTTTGGG+AGG - chr8_4:7330138-7330157 None:intergenic 40.0%
! CTTCTAGTTGAAAGCAGGAA+TGG - chr8_4:7330276-7330295 None:intergenic 40.0%
! CCTTTCTTCTAGTTGAAAGC+AGG - chr8_4:7330281-7330300 None:intergenic 40.0%
CCTGCTTTCAACTAGAAGAA+AGG + chr8_4:7330278-7330297 Msa1310700:intron 40.0%
AATTTGTGAGGAGCTTCCTT+TGG + chr8_4:7330401-7330420 Msa1310700:CDS 40.0%
ACAAGGAGAATACCATCCAA+AGG - chr8_4:7330420-7330439 None:intergenic 40.0%
GCAACCAGATTCATTATTCC+CGG - chr8_4:7330597-7330616 None:intergenic 40.0%
! GAGATAGAGGTGCATTCTAT+AGG + chr8_4:7330636-7330655 Msa1310700:intron 40.0%
! TTTGGGTGAATTTGGCTTAG+TGG + chr8_4:7331701-7331720 Msa1310700:intron 40.0%
! GTGAATTTGGCTTAGTGGTA+AGG + chr8_4:7331706-7331725 Msa1310700:intron 40.0%
TACTATTAGGTAAGGACCGA+AGG + chr8_4:7331885-7331904 Msa1310700:intron 40.0%
AAGTGCAACCCAAAAATTCC+AGG + chr8_4:7331922-7331941 Msa1310700:intron 40.0%
AGTGCAACCCAAAAATTCCA+GGG + chr8_4:7331923-7331942 Msa1310700:intron 40.0%
GTAGCAGTTAAAATCAAGGG+CGG - chr8_4:7332035-7332054 None:intergenic 40.0%
GATAGGTAGAGGACAAAGAA+TGG - chr8_4:7332532-7332551 None:intergenic 40.0%
ATGCTTGAGAAGATAGGTAG+AGG - chr8_4:7332543-7332562 None:intergenic 40.0%
CTCCAAATGCTTGAGAAGAT+AGG - chr8_4:7332549-7332568 None:intergenic 40.0%
! TGGTTCTTGACAAGTTTTGC+CGG + chr8_4:7332572-7332591 Msa1310700:intron 40.0%
TGGTTCCTTCATGAATAGCT+TGG + chr8_4:7332658-7332677 Msa1310700:intron 40.0%
AAGAGAGGACTTAAAACCCA+AGG + chr8_4:7332726-7332745 Msa1310700:intron 40.0%
! GCCAATTTTACCCTAGACTT+TGG + chr8_4:7333088-7333107 Msa1310700:intron 40.0%
CGGTTAATACTTTCAGTGAC+AGG - chr8_4:7333143-7333162 None:intergenic 40.0%
!!! GTATATTTTTTCTGCCCTCC+CGG + chr8_4:7333353-7333372 Msa1310700:intron 40.0%
TATAACCATCATTTCCGGGA+GGG - chr8_4:7333370-7333389 None:intergenic 40.0%
AGCGGTATAACCATCATTTC+CGG - chr8_4:7333375-7333394 None:intergenic 40.0%
CAATTCCAGATAGAGGTGAT+TGG - chr8_4:7333435-7333454 None:intergenic 40.0%
AACAGTAGGTATGGCTCAAT+TGG + chr8_4:7333495-7333514 Msa1310700:intron 40.0%
AGGCAATCAATTGAATGTGC+AGG + chr8_4:7333594-7333613 Msa1310700:intron 40.0%
TGTGAGCAATCAGACACAAA+AGG - chr8_4:7333682-7333701 None:intergenic 40.0%
AGCAAACAGAAAGCTTGTAG+CGG - chr8_4:7333745-7333764 None:intergenic 40.0%
!! TGTTTGCTGCTAGGATTTTC+AGG + chr8_4:7333757-7333776 Msa1310700:CDS 40.0%
! TTTTAGGCGATCCCTTCATA+AGG + chr8_4:7334012-7334031 Msa1310700:CDS 40.0%
!! AGTTGTATGGTAGTGGAGTT+TGG - chr8_4:7334143-7334162 None:intergenic 40.0%
TCTCACAAGTTGTATGGTAG+TGG - chr8_4:7334150-7334169 None:intergenic 40.0%
TGAAAAATGTGTAGCACTCC+TGG - chr8_4:7334288-7334307 None:intergenic 40.0%
TATATGGGAGGCAGATGATT+TGG - chr8_4:7334351-7334370 None:intergenic 40.0%
! TGCCTCCCATATAATTTTGG+TGG + chr8_4:7334358-7334377 Msa1310700:intron 40.0%
!! GCCTCCCATATAATTTTGGT+GGG + chr8_4:7334359-7334378 Msa1310700:intron 40.0%
TCCCACCAAAATTATATGGG+AGG - chr8_4:7334363-7334382 None:intergenic 40.0%
TCTAGCTGGATGAATTAGAG+GGG - chr8_4:7334471-7334490 None:intergenic 40.0%
TTGGAGAAAGAGAACAAGCT+TGG - chr8_4:7334743-7334762 None:intergenic 40.0%
ATATGAATCTGGACGAAGGT+AGG - chr8_4:7334819-7334838 None:intergenic 40.0%
ATCATAAACTGGTGCATACG+AGG - chr8_4:7334860-7334879 None:intergenic 40.0%
AGTGTAATTCTGCAACTAGC+TGG + chr8_4:7334952-7334971 Msa1310700:CDS 40.0%
ATTCACAACTGATCCACGTT+TGG - chr8_4:7335039-7335058 None:intergenic 40.0%
!!! AGCGCCTTTCTCTTTGTTTT+TGG - chr8_4:7335237-7335256 None:intergenic 40.0%
TCTTGACACTTGCAGTGAAA+GGG - chr8_4:7335387-7335406 None:intergenic 40.0%
ATCTTGACACTTGCAGTGAA+AGG - chr8_4:7335388-7335407 None:intergenic 40.0%
ATGAGCAAGTGCACAAACAT+TGG - chr8_4:7335414-7335433 None:intergenic 40.0%
GGTGGATACACAAATTATGC+AGG - chr8_4:7335579-7335598 None:intergenic 40.0%
GATATCGCACATAGCTCAGA+AGG + chr8_4:7327645-7327664 Msa1310700:five_prime_UTR 45.0%
! TCCCAGTAAGCGAAGTTTTC+TGG + chr8_4:7327729-7327748 Msa1310700:CDS 45.0%
GTCCAGAAAACTTCGCTTAC+TGG - chr8_4:7327734-7327753 None:intergenic 45.0%
TACCTTATTACCAACGCTCC+AGG + chr8_4:7327798-7327817 Msa1310700:CDS 45.0%
!! AACCTGGAGCGTTGGTAATA+AGG - chr8_4:7327803-7327822 None:intergenic 45.0%
!! GGTTTTGTGATGTACGAACC+TGG - chr8_4:7327819-7327838 None:intergenic 45.0%
TAGGGCTAGGGTTTGAAAAG+AGG - chr8_4:7327854-7327873 None:intergenic 45.0%
GCCAGAAACTAATCGAAGCA+GGG + chr8_4:7327969-7327988 Msa1310700:CDS 45.0%
!! ACCCTGCTTCGATTAGTTTC+TGG - chr8_4:7327973-7327992 None:intergenic 45.0%
TCGAAGCAGGGTTGAAAAGA+TGG + chr8_4:7327981-7328000 Msa1310700:CDS 45.0%
CGAAGCAGGGTTGAAAAGAT+GGG + chr8_4:7327982-7328001 Msa1310700:CDS 45.0%
AAATCGGAGAAATTGCGTCG+CGG + chr8_4:7328005-7328024 Msa1310700:CDS 45.0%
ACGCGCGATTATTTCAGAGA+GGG + chr8_4:7328115-7328134 Msa1310700:CDS 45.0%
TAAGGAGTGGAAGGTTGTTG+TGG + chr8_4:7328300-7328319 Msa1310700:CDS 45.0%
! TTGTTGTGGTGGAAATTGGG+AGG + chr8_4:7328314-7328333 Msa1310700:CDS 45.0%
TAGACCGGTGAGGTATAGTT+TGG + chr8_4:7328369-7328388 Msa1310700:CDS 45.0%
! AAATTGTTTTCCTGCTCCCC+TGG + chr8_4:7328648-7328667 Msa1310700:intron 45.0%
!! GCTATTTCTACAAGCTAGCC+AGG - chr8_4:7328669-7328688 None:intergenic 45.0%
! TGTTTAGAGTGGGAACCTAG+TGG + chr8_4:7329203-7329222 Msa1310700:CDS 45.0%
GACTGGTAAAATGAGCCACT+AGG - chr8_4:7329221-7329240 None:intergenic 45.0%
! AGTGGCTCATTTTACCAGTC+TGG + chr8_4:7329221-7329240 Msa1310700:CDS 45.0%
TTAGTCAGAATGGGGCAACT+GGG + chr8_4:7329255-7329274 Msa1310700:CDS 45.0%
TACAAGAACTACTGGGTCCA+TGG - chr8_4:7329421-7329440 None:intergenic 45.0%
ATGACTGAGGTTCCGCTATT+TGG + chr8_4:7329463-7329482 Msa1310700:intron 45.0%
CTTAGGGTATGTTTGGATGG+AGG + chr8_4:7329715-7329734 Msa1310700:intron 45.0%
TTTGGATGGAGGGTTTAGGA+TGG + chr8_4:7329726-7329745 Msa1310700:intron 45.0%
! TTGGATGGAGGGTTTAGGAT+GGG + chr8_4:7329727-7329746 Msa1310700:intron 45.0%
!! GAAATGATGGGGGTTTTTGG+AGG - chr8_4:7329898-7329917 None:intergenic 45.0%
GGCGCATGAATTCTCATGAA+GGG - chr8_4:7330068-7330087 None:intergenic 45.0%
AGGCGCATGAATTCTCATGA+AGG - chr8_4:7330069-7330088 None:intergenic 45.0%
GGTTCTTGCCACAATTTGTG+AGG + chr8_4:7330389-7330408 Msa1310700:intron 45.0%
AGGAAGCTCCTCACAAATTG+TGG - chr8_4:7330400-7330419 None:intergenic 45.0%
TCTACATCAAATGCAGGAGC+AGG + chr8_4:7330560-7330579 Msa1310700:intron 45.0%
TGCATAAACTTAGGTTCCCG+TGG + chr8_4:7330614-7330633 Msa1310700:CDS 45.0%
AGAATGCACCTCTATCTCCA+CGG - chr8_4:7330634-7330653 None:intergenic 45.0%
CATAGCAGGCAGTACAAGAA+TGG - chr8_4:7330679-7330698 None:intergenic 45.0%
TGTACTGCCTGCTATGTTAC+TGG + chr8_4:7330683-7330702 Msa1310700:intron 45.0%
GTGGGGAAATGTCAGACAAT+AGG - chr8_4:7330783-7330802 None:intergenic 45.0%
TGACATTTCCCCACCGTAAA+TGG + chr8_4:7330789-7330808 Msa1310700:intron 45.0%
!!! TTTTAACCAGTGGTGGATCC+AGG + chr8_4:7330865-7330884 Msa1310700:intron 45.0%
! TAGATAATCGGCAGTTGGTG+AGG + chr8_4:7331852-7331871 Msa1310700:intron 45.0%
TTGCATTGCACCACATCCTT+CGG - chr8_4:7331904-7331923 None:intergenic 45.0%
AACAGCTAAAATCCATGGGG+AGG - chr8_4:7332064-7332083 None:intergenic 45.0%
TTCATTAGGTTACCCTGAGC+AGG + chr8_4:7332170-7332189 Msa1310700:intron 45.0%
AGACCTCTCTGTTCACTGAA+AGG - chr8_4:7332377-7332396 None:intergenic 45.0%
AGTCCTCTCTTCAATCTGCT+TGG - chr8_4:7332717-7332736 None:intergenic 45.0%
CTGGAGGACAGTTAAGATGA+TGG - chr8_4:7332795-7332814 None:intergenic 45.0%
GTAAACGGTAGAAAGTCCGA+TGG - chr8_4:7332923-7332942 None:intergenic 45.0%
TCCTAGTGCCTACAATGATG+TGG + chr8_4:7333258-7333277 Msa1310700:intron 45.0%
GTATAACCATCATTTCCGGG+AGG - chr8_4:7333371-7333390 None:intergenic 45.0%
GCGGTATAACCATCATTTCC+GGG - chr8_4:7333374-7333393 None:intergenic 45.0%
AGCAGAAAAAGGAGAGTCAG+TGG + chr8_4:7333627-7333646 Msa1310700:CDS 45.0%
CAGACACAAAAGGAGGCAAA+CGG - chr8_4:7333672-7333691 None:intergenic 45.0%
GAGCAATCAGACACAAAAGG+AGG - chr8_4:7333679-7333698 None:intergenic 45.0%
TAGCGGAGCTGTAAGAAACA+TGG - chr8_4:7333728-7333747 None:intergenic 45.0%
! CAAGCTTTCTGTTTGCTGCT+AGG + chr8_4:7333748-7333767 Msa1310700:CDS 45.0%
! AAATAACTGGGGATTGGCGT+TGG + chr8_4:7333953-7333972 Msa1310700:CDS 45.0%
AGACACGCTTGATCCAGTTT+GGG + chr8_4:7333983-7334002 Msa1310700:CDS 45.0%
ACACCATGTTATGACAGGAC+AGG + chr8_4:7334695-7334714 Msa1310700:intron 45.0%
TAGCCTGTCCTGTCATAACA+TGG - chr8_4:7334701-7334720 None:intergenic 45.0%
!! GGACAGGCTAAAGTTTGTTG+AGG + chr8_4:7334711-7334730 Msa1310700:intron 45.0%
ACACTTTGATACGAGCAGCA+TGG - chr8_4:7334937-7334956 None:intergenic 45.0%
! CTGCAACTAGCTGGCATTTT+TGG + chr8_4:7334961-7334980 Msa1310700:CDS 45.0%
!! CAAAGAGAAAGGCGCTTATG+TGG + chr8_4:7335241-7335260 Msa1310700:three_prime_UTR 45.0%
!!! TTTTAAAAATTGTTAATTTT+AGG + chr8_4:7334236-7334255 Msa1310700:intron 5.0%
!!! TTTAAAAATTGTTAATTTTA+GGG + chr8_4:7334237-7334256 Msa1310700:intron 5.0%
!!! TATTCAAATTATTTTATTTT+TGG - chr8_4:7334512-7334531 None:intergenic 5.0%
CGCCAGAAACTAATCGAAGC+AGG + chr8_4:7327968-7327987 Msa1310700:CDS 50.0%
CACGCGCGATTATTTCAGAG+AGG + chr8_4:7328114-7328133 Msa1310700:CDS 50.0%
!!! AGCAGTTGAGGTTTTTGGCG+AGG + chr8_4:7328167-7328186 Msa1310700:CDS 50.0%
! GGAACACGCGGTAAAGTATC+AGG - chr8_4:7328409-7328428 None:intergenic 50.0%
TTCCTGTTGCTATCGCGAAG+CGG + chr8_4:7328425-7328444 Msa1310700:CDS 50.0%
! GGCTCATTTTACCAGTCTGG+TGG + chr8_4:7329224-7329243 Msa1310700:CDS 50.0%
CTTAGTCAGAATGGGGCAAC+TGG + chr8_4:7329254-7329273 Msa1310700:CDS 50.0%
CTACGTTACCAGCAAACCCA+CGG + chr8_4:7329315-7329334 Msa1310700:CDS 50.0%
ATAGCTTTCCGTGGGTTTGC+TGG - chr8_4:7329326-7329345 None:intergenic 50.0%
GCGGAACCTCAGTCATTGAA+TGG - chr8_4:7329459-7329478 None:intergenic 50.0%
! ATGGAGGGTTTAGGATGGGA+AGG + chr8_4:7329731-7329750 Msa1310700:intron 50.0%
! TGGAGGGTTTAGGATGGGAA+GGG + chr8_4:7329732-7329751 Msa1310700:intron 50.0%
TGTGAGGAGCTTCCTTTGGA+TGG + chr8_4:7330405-7330424 Msa1310700:CDS 50.0%
AATGCAGGAGCAGGATCTTC+TGG + chr8_4:7330569-7330588 Msa1310700:intron 50.0%
! GGTGCCGGGAATAATGAATC+TGG + chr8_4:7330590-7330609 Msa1310700:CDS 50.0%
TTAGGTTCCCGTGGAGATAG+AGG + chr8_4:7330623-7330642 Msa1310700:CDS 50.0%
GAATGCACCTCTATCTCCAC+GGG - chr8_4:7330633-7330652 None:intergenic 50.0%
AGCAGAGCCAGTAACATAGC+AGG - chr8_4:7330693-7330712 None:intergenic 50.0%
AGTTTGCACCCCCTAATCCA+GGG - chr8_4:7330892-7330911 None:intergenic 50.0%
AAGTTTGCACCCCCTAATCC+AGG - chr8_4:7330893-7330912 None:intergenic 50.0%
TAGGTAAGGACCGAAGGATG+TGG + chr8_4:7331891-7331910 Msa1310700:intron 50.0%
! CTTTTAACGGCACCTGCTCA+GGG - chr8_4:7332185-7332204 None:intergenic 50.0%
! TCTTTTAACGGCACCTGCTC+AGG - chr8_4:7332186-7332205 None:intergenic 50.0%
GTGCCTTTCAGTGAACAGAG+AGG + chr8_4:7332371-7332390 Msa1310700:intron 50.0%
! ACAAGTTTTGCCGGTCGTAG+TGG + chr8_4:7332581-7332600 Msa1310700:intron 50.0%
GGTCCAAGCAGATTGAAGAG+AGG + chr8_4:7332711-7332730 Msa1310700:intron 50.0%
GCCACATCATTGTAGGCACT+AGG - chr8_4:7333262-7333281 None:intergenic 50.0%
ACAAAAGGAGGCAAACGGCT+TGG - chr8_4:7333667-7333686 None:intergenic 50.0%
CAGACACGCTTGATCCAGTT+TGG + chr8_4:7333982-7334001 Msa1310700:CDS 50.0%
GACACGCTTGATCCAGTTTG+GGG + chr8_4:7333984-7334003 Msa1310700:CDS 50.0%
CCTAAAACCTGTCCCCAAAC+TGG - chr8_4:7333999-7334018 None:intergenic 50.0%
! CCAGTTTGGGGACAGGTTTT+AGG + chr8_4:7333996-7334015 Msa1310700:CDS 50.0%
!! TGGGAGGCAGATGATTTGGT+GGG - chr8_4:7334347-7334366 None:intergenic 50.0%
! ATGGGAGGCAGATGATTTGG+TGG - chr8_4:7334348-7334367 None:intergenic 50.0%
CATACGAGGTCAACACTGTC+TGG - chr8_4:7334846-7334865 None:intergenic 50.0%
GAGAAGGGACACATGTTGGA+AGG - chr8_4:7334894-7334913 None:intergenic 50.0%
GGAAGAGAAGGGACACATGT+TGG - chr8_4:7334898-7334917 None:intergenic 50.0%
GCATGACAAGTTGTGTGCTC+AGG + chr8_4:7335285-7335304 Msa1310700:three_prime_UTR 50.0%
GCAGTGTGCCAACATCTTCA+TGG - chr8_4:7335468-7335487 None:intergenic 50.0%
GATGTACGAACCTGGAGCGT+TGG - chr8_4:7327811-7327830 None:intergenic 55.0%
GGAGAAATTGCGTCGCGGAT+TGG + chr8_4:7328010-7328029 Msa1310700:CDS 55.0%
GGAGTGGAAGGTTGTTGTGG+TGG + chr8_4:7328303-7328322 Msa1310700:CDS 55.0%
GCGATAGCAACAGGAACACG+CGG - chr8_4:7328421-7328440 None:intergenic 55.0%
TTCCGCTTCGCGATAGCAAC+AGG - chr8_4:7328430-7328449 None:intergenic 55.0%
!! CGTGGGTTTGCTGGTAACGT+AGG - chr8_4:7329317-7329336 None:intergenic 55.0%
! AGGGTTTAGGATGGGAAGGG+AGG + chr8_4:7329735-7329754 Msa1310700:intron 55.0%
! GGGTTTAGGATGGGAAGGGA+GGG + chr8_4:7329736-7329755 Msa1310700:intron 55.0%
TGGATCCAGGACCCTGGATT+AGG + chr8_4:7330878-7330897 Msa1310700:intron 55.0%
GGATCCAGGACCCTGGATTA+GGG + chr8_4:7330879-7330898 Msa1310700:intron 55.0%
! GATCCAGGACCCTGGATTAG+GGG + chr8_4:7330880-7330899 Msa1310700:intron 55.0%
! ATCCAGGACCCTGGATTAGG+GGG + chr8_4:7330881-7330900 Msa1310700:intron 55.0%
TGCACACCCTCAAGTGCACT+TGG + chr8_4:7332007-7332026 Msa1310700:intron 55.0%
TTCTGCCCTCCCGGAAATGA+TGG + chr8_4:7333362-7333381 Msa1310700:intron 55.0%
GGCTGCCAATCACCTCTATC+TGG + chr8_4:7333427-7333446 Msa1310700:intron 55.0%
GCTTGATCCAGTTTGGGGAC+AGG + chr8_4:7333989-7334008 Msa1310700:CDS 55.0%
!! GGACAGGCGTTGGAAGAGAA+GGG - chr8_4:7334909-7334928 None:intergenic 55.0%
!! AGGACAGGCGTTGGAAGAGA+AGG - chr8_4:7334910-7334929 None:intergenic 55.0%
GATACGAGCAGCATGGAGCT+AGG - chr8_4:7334930-7334949 None:intergenic 55.0%
TACAAGCTAGCCAGGGGAGC+AGG - chr8_4:7328661-7328680 None:intergenic 60.0%
CAGAATGGGGCAACTGGGAC+TGG + chr8_4:7329260-7329279 Msa1310700:CDS 60.0%
GGAGCAGGATCTTCTGGTGC+CGG + chr8_4:7330575-7330594 Msa1310700:intron 60.0%
GAGCAGGATCTTCTGGTGCC+GGG + chr8_4:7330576-7330595 Msa1310700:CDS 60.0%
GCGGAGCCAAGTGCACTTGA+GGG - chr8_4:7332016-7332035 None:intergenic 60.0%
TGCTACTCGTTGCCTCCCCA+TGG + chr8_4:7332049-7332068 Msa1310700:intron 60.0%
CATGGAGCTAGGACAGGCGT+TGG - chr8_4:7334919-7334938 None:intergenic 60.0%
GAGCAGCATGGAGCTAGGAC+AGG - chr8_4:7334925-7334944 None:intergenic 60.0%
CAGGGTCCTGGATCCACCAC+TGG - chr8_4:7330874-7330893 None:intergenic 65.0%
!! CAGTGGTGGATCCAGGACCC+TGG + chr8_4:7330872-7330891 Msa1310700:intron 65.0%
CACCCCCTAATCCAGGGTCC+TGG - chr8_4:7330886-7330905 None:intergenic 65.0%
GGCGGAGCCAAGTGCACTTG+AGG - chr8_4:7332017-7332036 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 7327497 7335670 7327497 ID=Msa1310700;Name=Msa1310700
chr8_4 mRNA 7327497 7335670 7327497 ID=Msa1310700-mRNA-1;Parent=Msa1310700;Name=Msa1310700-mRNA-1;_AED=0.02;_eAED=0.02;_QI=189|0.87|0.88|1|0.75|0.88|9|614|579
chr8_4 exon 7327497 7327819 7327497 ID=Msa1310700-mRNA-1:exon:2599;Parent=Msa1310700-mRNA-1
chr8_4 exon 7327901 7328495 7327901 ID=Msa1310700-mRNA-1:exon:2600;Parent=Msa1310700-mRNA-1
chr8_4 exon 7329158 7329379 7329158 ID=Msa1310700-mRNA-1:exon:2601;Parent=Msa1310700-mRNA-1
chr8_4 exon 7330390 7330456 7330390 ID=Msa1310700-mRNA-1:exon:2602;Parent=Msa1310700-mRNA-1
chr8_4 exon 7330576 7330644 7330576 ID=Msa1310700-mRNA-1:exon:2603;Parent=Msa1310700-mRNA-1
chr8_4 exon 7332903 7333012 7332903 ID=Msa1310700-mRNA-1:exon:2604;Parent=Msa1310700-mRNA-1
chr8_4 exon 7333616 7333795 7333616 ID=Msa1310700-mRNA-1:exon:2605;Parent=Msa1310700-mRNA-1
chr8_4 exon 7333912 7334048 7333912 ID=Msa1310700-mRNA-1:exon:2606;Parent=Msa1310700-mRNA-1
chr8_4 exon 7334831 7335670 7334831 ID=Msa1310700-mRNA-1:exon:2607;Parent=Msa1310700-mRNA-1
chr8_4 five_prime_UTR 7327497 7327685 7327497 ID=Msa1310700-mRNA-1:five_prime_utr;Parent=Msa1310700-mRNA-1
chr8_4 CDS 7327686 7327819 7327686 ID=Msa1310700-mRNA-1:cds;Parent=Msa1310700-mRNA-1
chr8_4 CDS 7327901 7328495 7327901 ID=Msa1310700-mRNA-1:cds;Parent=Msa1310700-mRNA-1
chr8_4 CDS 7329158 7329379 7329158 ID=Msa1310700-mRNA-1:cds;Parent=Msa1310700-mRNA-1
chr8_4 CDS 7330390 7330456 7330390 ID=Msa1310700-mRNA-1:cds;Parent=Msa1310700-mRNA-1
chr8_4 CDS 7330576 7330644 7330576 ID=Msa1310700-mRNA-1:cds;Parent=Msa1310700-mRNA-1
chr8_4 CDS 7332903 7333012 7332903 ID=Msa1310700-mRNA-1:cds;Parent=Msa1310700-mRNA-1
chr8_4 CDS 7333616 7333795 7333616 ID=Msa1310700-mRNA-1:cds;Parent=Msa1310700-mRNA-1
chr8_4 CDS 7333912 7334048 7333912 ID=Msa1310700-mRNA-1:cds;Parent=Msa1310700-mRNA-1
chr8_4 CDS 7334831 7335056 7334831 ID=Msa1310700-mRNA-1:cds;Parent=Msa1310700-mRNA-1
chr8_4 three_prime_UTR 7335057 7335670 7335057 ID=Msa1310700-mRNA-1:three_prime_utr;Parent=Msa1310700-mRNA-1
Gene Sequence

>Msa1310700

ATGGCGCAACAGCAGCAACAACAACAACAGCTGAACAGCAACATCCCAGTAAGCGAAGTTTTCTGGACTCTCGTCGACAAAGCCGACAAAAAATTCTCCAAAATCAGAGACTTACCTTATTACCAACGCTCCAGGCATGATACTTATTTCTGCAAGGTTTTCAAAGTCTACACACAATTATGGAAATTCCAACAAGAAAATCGCCAGAAACTAATCGAAGCAGGGTTGAAAAGATGGGAAATCGGAGAAATTGCGTCGCGGATTGGTCAATTGTATTTTGGACAATATATGAAAACTTCTGATTACAATTATTTATCAGAATCTTACATTTTCTATGAAGCGATATTCACGCGCGATTATTTCAGAGAGGGATTGTTTTCGGATGTTAATATTGCGAATAAGCAGTTGAGGTTTTTGGCGAGGTTTTTAACGGTGTGTTTGCTTTTGAATCGGAGGGAAATGTTGCAACAATTGGTTAATCAGCTGAAAGTGTTGGTTGATGAGTGTAAGAGAGTGTTTGTGGATAGTGATTTTAAGGAGTGGAAGGTTGTTGTGGTGGAAATTGGGAGGTTTTTGAAGGTTGATACGGGTTTTATGAATGTTAGACCGGTGAGGTATAGTTTGGTTTTGGATTCTCATCCTGATACTTTACCGCGTGTTCCTGTTGCTATCGCGAAGCGGAATTTGAAATTAAGAGATGCTGTGTTGAGTAGCTTCCATTATAATGAGGTTAAGTTTTCAGAGTTCACTATTGACACTTTTAGGATGCTTCAATGTTTAGAGTGGGAACCTAGTGGCTCATTTTACCAGTCTGGTGGTTCAAAACTTAGTCAGAATGGGGCAACTGGGACTGGTCGTATCAGTTACATACAAGATATTGCTGATCCTACGTTACCAGCAAACCCACGGAAAGCTATATTATACCGTCCTTCACTGACACATTTCATAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCTTTGGATGGTATTCTCCTTGTATATTTGTCAGCTTCAGGAGCAGGATCTTCTGGTGCCGGGAATAATGAATCTGGTTGCATAAACTTAGGTTCCCGTGGAGATAGAGGATCAAACTCCATATATCCATCGGACTTTCTACCGTTTACTAGAAGACCACTTCTTTTAATCATTGATAATGAGAACAGCAAAGCTTTTAAGGCAAGCCCTACTACTTCAGTCATAACTGAAGCAGAAAAAGGAGAGTCAGTGGCAATGCTTCTTTCTCCAAGCCGTTTGCCTCCTTTTGTGTCTGATTGCTCACATTCTTCAAATGGGAGCCTATTCACCATGTTTCTTACAGCTCCGCTACAAGCTTTCTGTTTGCTGCTAGGATTTTCAGGCACTGATATTGATTTGGACTTGTACAACAAAGCTGAAACACTGCTGTCATCATCATTAAATAACTGGGGATTGGCGTTGGCATCAACAGACACGCTTGATCCAGTTTGGGGACAGGTTTTAGGCGATCCCTTCATAAGGAGACTTCTTATGAGATTCATATTTTGCCAGACAGTGTTGACCTCGTATGCACCAGTTTATGATAAAAATGAATTCCTTCCAACATGTGTCCCTTCTCTTCCAACGCCTGTCCTAGCTCCATGCTGCTCGTATCAAAGTGTAATTCTGCAACTAGCTGGCATTTTTGGTGCAACTAAGCACTTCATCTTTTCTGAGGACGTTTCTCCTAAAAATACACTTCCAAACGTGGATCAGTTGTGA

Protein sequence

>Msa1310700

MAQQQQQQQQLNSNIPVSEVFWTLVDKADKKFSKIRDLPYYQRSRHDTYFCKVFKVYTQLWKFQQENRQKLIEAGLKRWEIGEIASRIGQLYFGQYMKTSDYNYLSESYIFYEAIFTRDYFREGLFSDVNIANKQLRFLARFLTVCLLLNRREMLQQLVNQLKVLVDECKRVFVDSDFKEWKVVVVEIGRFLKVDTGFMNVRPVRYSLVLDSHPDTLPRVPVAIAKRNLKLRDAVLSSFHYNEVKFSEFTIDTFRMLQCLEWEPSGSFYQSGGSKLSQNGATGTGRISYIQDIADPTLPANPRKAILYRPSLTHFIAVLATICEELPLDGILLVYLSASGAGSSGAGNNESGCINLGSRGDRGSNSIYPSDFLPFTRRPLLLIIDNENSKAFKASPTTSVITEAEKGESVAMLLSPSRLPPFVSDCSHSSNGSLFTMFLTAPLQAFCLLLGFSGTDIDLDLYNKAETLLSSSLNNWGLALASTDTLDPVWGQVLGDPFIRRLLMRFIFCQTVLTSYAPVYDKNEFLPTCVPSLPTPVLAPCCSYQSVILQLAGIFGATKHFIFSEDVSPKNTLPNVDQL*