Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186010 | AES61472.2 | 97.761 | 268 | 5 | 1 | 1 | 267 | 1 | 268 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186010 | sp|Q9FP29|KNOS1_ORYSJ | 58.268 | 254 | 99 | 3 | 12 | 262 | 38 | 287 | 2.94e-90 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186010 | G7I9I1 | 97.761 | 268 | 5 | 1 | 1 | 267 | 1 | 268 | 0.0 | 545 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0186010 | TF | HB-KNOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0186010 | 0.832321 | 1.010411e-55 | -8.615850e-47 |
| Msa0001940 | Msa0186010 | 0.844288 | 8.293330e-59 | -8.615850e-47 |
| Msa0002580 | Msa0186010 | 0.801698 | 7.963105e-49 | -8.615850e-47 |
| Msa0005890 | Msa0186010 | 0.808439 | 3.095855e-50 | -8.615850e-47 |
| Msa0017670 | Msa0186010 | 0.836833 | 7.422211e-57 | -8.615850e-47 |
| Msa0017930 | Msa0186010 | 0.801003 | 1.104969e-48 | -8.615850e-47 |
| Msa0017950 | Msa0186010 | 0.837067 | 6.466034e-57 | -8.615850e-47 |
| Msa0024550 | Msa0186010 | 0.830164 | 3.425643e-55 | -8.615850e-47 |
| Msa0027820 | Msa0186010 | 0.820935 | 5.274038e-53 | -8.615850e-47 |
| Msa0035120 | Msa0186010 | 0.811453 | 6.946886e-51 | -8.615850e-47 |
| Msa0042610 | Msa0186010 | 0.812366 | 4.396094e-51 | -8.615850e-47 |
| Msa0080580 | Msa0186010 | 0.947903 | 2.711406e-106 | -8.615850e-47 |
| Msa0092790 | Msa0186010 | 0.833609 | 4.834822e-56 | -8.615850e-47 |
| Msa0097770 | Msa0186010 | 0.834724 | 2.539460e-56 | -8.615850e-47 |
| Msa0098040 | Msa0186010 | 0.860330 | 2.226777e-63 | -8.615850e-47 |
| Msa0117140 | Msa0186010 | 0.808648 | 2.792852e-50 | -8.615850e-47 |
| Msa0120400 | Msa0186010 | 0.831726 | 1.417335e-55 | -8.615850e-47 |
| Msa0124060 | Msa0186010 | 0.812013 | 5.249537e-51 | -8.615850e-47 |
| Msa0131900 | Msa0186010 | 0.811580 | 6.519625e-51 | -8.615850e-47 |
| Msa0164330 | Msa0186010 | 0.819097 | 1.388803e-52 | -8.615850e-47 |
| Msa0167520 | Msa0186010 | 0.800723 | 1.260597e-48 | -8.615850e-47 |
| Msa0168500 | Msa0186010 | 0.808092 | 3.670444e-50 | -8.615850e-47 |
| Msa0175930 | Msa0186010 | 0.804013 | 2.647971e-49 | -8.615850e-47 |
| Msa0186010 | Msa0197100 | 0.845925 | 2.996319e-59 | -8.615850e-47 |
| Msa0186010 | Msa0214550 | 0.810992 | 8.749052e-51 | -8.615850e-47 |
| Msa0186010 | Msa0221000 | 0.828368 | 9.346226e-55 | -8.615850e-47 |
| Msa0186010 | Msa0224780 | 0.802196 | 6.291758e-49 | -8.615850e-47 |
| Msa0186010 | Msa0225100 | 0.821097 | 4.838330e-53 | -8.615850e-47 |
| Msa0186010 | Msa0225860 | 0.806543 | 7.816922e-50 | -8.615850e-47 |
| Msa0186010 | Msa0239030 | 0.856405 | 3.290598e-62 | -8.615850e-47 |
| Msa0186010 | Msa0240900 | 0.839584 | 1.451897e-57 | -8.615850e-47 |
| Msa0186010 | Msa0244640 | 0.835145 | 1.989748e-56 | -8.615850e-47 |
| Msa0186010 | Msa0265850 | 0.818564 | 1.835244e-52 | -8.615850e-47 |
| Msa0186010 | Msa0266180 | 0.834961 | 2.213447e-56 | -8.615850e-47 |
| Msa0186010 | Msa0276740 | 0.862872 | 3.724399e-64 | -8.615850e-47 |
| Msa0186010 | Msa0283330 | 0.821937 | 3.096100e-53 | -8.615850e-47 |
| Msa0186010 | Msa0287740 | 0.826501 | 2.620872e-54 | -8.615850e-47 |
| Msa0186010 | Msa0298410 | 0.839530 | 1.499623e-57 | -8.615850e-47 |
| Msa0186010 | Msa0300240 | 0.803567 | 3.277466e-49 | -8.615850e-47 |
| Msa0186010 | Msa0300270 | 0.823528 | 1.319508e-53 | -8.615850e-47 |
| Msa0186010 | Msa0300320 | 0.835327 | 1.789823e-56 | -8.615850e-47 |
| Msa0186010 | Msa0307670 | 0.837742 | 4.344785e-57 | -8.615850e-47 |
| Msa0186010 | Msa0316680 | 0.846896 | 1.628541e-59 | -8.615850e-47 |
| Msa0186010 | Msa0317970 | 0.818313 | 2.091963e-52 | -8.615850e-47 |
| Msa0186010 | Msa0321620 | 0.815021 | 1.144468e-51 | -8.615850e-47 |
| Msa0186010 | Msa0337580 | 0.818335 | 2.068574e-52 | -8.615850e-47 |
| Msa0186010 | Msa0337700 | 0.836819 | 7.483289e-57 | -8.615850e-47 |
| Msa0186010 | Msa0339500 | 0.804649 | 1.951622e-49 | -8.615850e-47 |
| Msa0186010 | Msa0360210 | 0.813775 | 2.158300e-51 | -8.615850e-47 |
| Msa0186010 | Msa0378720 | 0.829899 | 3.975232e-55 | -8.615850e-47 |
| Msa0186010 | Msa0406770 | 0.809507 | 1.828698e-50 | -8.615850e-47 |
| Msa0186010 | Msa0428370 | 0.821787 | 3.352567e-53 | -8.615850e-47 |
| Msa0186010 | Msa0428920 | 0.810900 | 9.159693e-51 | -8.615850e-47 |
| Msa0186010 | Msa0450400 | -0.811313 | 7.451328e-51 | -8.615850e-47 |
| Msa0186010 | Msa0474730 | 0.814582 | 1.431736e-51 | -8.615850e-47 |
| Msa0186010 | Msa0483100 | 0.800120 | 1.672770e-48 | -8.615850e-47 |
| Msa0186010 | Msa0519750 | 0.806979 | 6.323075e-50 | -8.615850e-47 |
| Msa0186010 | Msa0519830 | 0.815119 | 1.088433e-51 | -8.615850e-47 |
| Msa0186010 | Msa0526420 | 0.802599 | 5.196990e-49 | -8.615850e-47 |
| Msa0186010 | Msa0530780 | 0.819297 | 1.250916e-52 | -8.615850e-47 |
| Msa0186010 | Msa0572840 | 0.804517 | 2.080041e-49 | -8.615850e-47 |
| Msa0186010 | Msa0580370 | 0.823647 | 1.237668e-53 | -8.615850e-47 |
| Msa0186010 | Msa0581470 | 0.837623 | 4.659388e-57 | -8.615850e-47 |
| Msa0186010 | Msa0583360 | -0.805228 | 1.477116e-49 | -8.615850e-47 |
| Msa0186010 | Msa0597790 | 0.836771 | 7.695662e-57 | -8.615850e-47 |
| Msa0186010 | Msa0614000 | 0.806909 | 6.541465e-50 | -8.615850e-47 |
| Msa0186010 | Msa0624900 | 0.801904 | 7.224209e-49 | -8.615850e-47 |
| Msa0186010 | Msa0637560 | 0.805842 | 1.098194e-49 | -8.615850e-47 |
| Msa0186010 | Msa0637580 | 0.805181 | 1.511369e-49 | -8.615850e-47 |
| Msa0186010 | Msa0638480 | 0.818263 | 2.147351e-52 | -8.615850e-47 |
| Msa0186010 | Msa0679870 | 0.803274 | 3.768926e-49 | -8.615850e-47 |
| Msa0186010 | Msa0725000 | 0.815945 | 7.128590e-52 | -8.615850e-47 |
| Msa0186010 | Msa0752450 | 0.801664 | 8.092181e-49 | -8.615850e-47 |
| Msa0186010 | Msa0762910 | 0.828315 | 9.624286e-55 | -8.615850e-47 |
| Msa0186010 | Msa0765270 | 0.804737 | 1.871145e-49 | -8.615850e-47 |
| Msa0186010 | Msa0769180 | 0.814833 | 1.259651e-51 | -8.615850e-47 |
| Msa0186010 | Msa0792370 | 0.835873 | 1.301846e-56 | -8.615850e-47 |
| Msa0186010 | Msa0795870 | 0.824126 | 9.553860e-54 | -8.615850e-47 |
| Msa0186010 | Msa0805330 | 0.850897 | 1.261819e-60 | -8.615850e-47 |
| Msa0186010 | Msa0829300 | 0.802107 | 6.563861e-49 | -8.615850e-47 |
| Msa0186010 | Msa0829330 | 0.815220 | 1.033500e-51 | -8.615850e-47 |
| Msa0186010 | Msa0833530 | 0.808645 | 2.798026e-50 | -8.615850e-47 |
| Msa0186010 | Msa0833650 | 0.827258 | 1.727365e-54 | -8.615850e-47 |
| Msa0186010 | Msa0842680 | 0.837051 | 6.527743e-57 | -8.615850e-47 |
| Msa0186010 | Msa0845110 | 0.811623 | 6.382489e-51 | -8.615850e-47 |
| Msa0186010 | Msa0847540 | 0.804991 | 1.656172e-49 | -8.615850e-47 |
| Msa0186010 | Msa0861510 | 0.800928 | 1.144668e-48 | -8.615850e-47 |
| Msa0186010 | Msa0861600 | 0.808743 | 2.665850e-50 | -8.615850e-47 |
| Msa0186010 | Msa0967380 | 0.852717 | 3.844080e-61 | -8.615850e-47 |
| Msa0186010 | Msa0967870 | 0.824079 | 9.802774e-54 | -8.615850e-47 |
| Msa0186010 | Msa1019430 | 0.800359 | 1.495410e-48 | -8.615850e-47 |
| Msa0186010 | Msa1029070 | 0.812606 | 3.896323e-51 | -8.615850e-47 |
| Msa0186010 | Msa1043370 | 0.822288 | 2.566387e-53 | -8.615850e-47 |
| Msa0186010 | Msa1087650 | 0.994909 | 2.834739e-211 | -8.615850e-47 |
| Msa0186010 | Msa1089450 | 0.825930 | 3.583698e-54 | -8.615850e-47 |
| Msa0186010 | Msa1132840 | 0.822345 | 2.489387e-53 | -8.615850e-47 |
| Msa0186010 | Msa1144450 | 0.801004 | 1.104804e-48 | -8.615850e-47 |
| Msa0186010 | Msa1155170 | -0.801972 | 6.996743e-49 | -8.615850e-47 |
| Msa0186010 | Msa1156160 | 0.807330 | 5.328119e-50 | -8.615850e-47 |
| Msa0186010 | Msa1211230 | -0.801277 | 9.713768e-49 | -8.615850e-47 |
| Msa0186010 | Msa1225860 | -0.810521 | 1.105815e-50 | -8.615850e-47 |
| Msa0186010 | Msa1228200 | 0.834619 | 2.699621e-56 | -8.615850e-47 |
| Msa0186010 | Msa1236410 | 0.809969 | 1.454711e-50 | -8.615850e-47 |
| Msa0186010 | Msa1238820 | 0.802395 | 5.725303e-49 | -8.615850e-47 |
| Msa0186010 | Msa1265650 | 0.801606 | 8.317757e-49 | -8.615850e-47 |
| Msa0186010 | Msa1267770 | 0.829748 | 4.326319e-55 | -8.615850e-47 |
| Msa0186010 | Msa1285550 | 0.803396 | 3.555714e-49 | -8.615850e-47 |
| Msa0186010 | Msa1297230 | 0.815300 | 9.923764e-52 | -8.615850e-47 |
| Msa0186010 | Msa1303560 | 0.812152 | 4.895045e-51 | -8.615850e-47 |
| Msa0186010 | Msa1303650 | 0.807189 | 5.707141e-50 | -8.615850e-47 |
| Msa0186010 | Msa1320670 | 0.803037 | 4.219322e-49 | -8.615850e-47 |
| Msa0186010 | Msa1343430 | 0.817949 | 2.528999e-52 | -8.615850e-47 |
| Msa0186010 | Msa1355450 | 0.803062 | 4.169411e-49 | -8.615850e-47 |
| Msa0186010 | Msa1357790 | 0.949317 | 1.624660e-107 | -8.615850e-47 |
| Msa0186010 | Msa1366340 | 0.818955 | 1.496249e-52 | -8.615850e-47 |
| Msa0186010 | Msa1373100 | 0.810850 | 9.389498e-51 | -8.615850e-47 |
| Msa0186010 | Msa1422950 | 0.810837 | 9.449333e-51 | -8.615850e-47 |
| Msa0186010 | Msa1425880 | 0.816489 | 5.387401e-52 | -8.615850e-47 |
| Msa0186010 | Msa1446810 | 0.802356 | 5.832319e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186010 | MtrunA17_Chr1g0192791 | 97.761 | 268 | 5 | 1 | 1 | 267 | 1 | 268 | 0.0 | 544 |
| Msa0186010 | MtrunA17_Chr5g0413201 | 53.307 | 257 | 104 | 4 | 9 | 259 | 63 | 309 | 8.64e-84 | 253 |
| Msa0186010 | MtrunA17_Chr1g0151961 | 48.810 | 252 | 116 | 4 | 18 | 264 | 119 | 362 | 1.69e-70 | 221 |
| Msa0186010 | MtrunA17_Chr5g0439391 | 48.996 | 249 | 102 | 4 | 19 | 259 | 47 | 278 | 4.25e-68 | 213 |
| Msa0186010 | MtrunA17_Chr2g0289201 | 50.617 | 243 | 106 | 4 | 18 | 256 | 117 | 349 | 4.42e-66 | 210 |
| Msa0186010 | MtrunA17_Chr3g0137241 | 35.249 | 261 | 122 | 8 | 19 | 244 | 107 | 355 | 1.96e-37 | 135 |
| Msa0186010 | MtrunA17_Chr1g0149651 | 34.538 | 249 | 138 | 6 | 19 | 244 | 174 | 420 | 2.16e-37 | 136 |
| Msa0186010 | MtrunA17_Chr5g0398181 | 33.597 | 253 | 145 | 4 | 15 | 244 | 24 | 276 | 1.49e-36 | 131 |
| Msa0186010 | MtrunA17_Chr4g0065241 | 33.065 | 248 | 147 | 4 | 16 | 244 | 68 | 315 | 2.77e-36 | 131 |
| Msa0186010 | MtrunA17_Chr2g0305101 | 34.274 | 248 | 138 | 6 | 19 | 244 | 95 | 339 | 3.37e-35 | 129 |
| Msa0186010 | MtrunA17_Chr6g0479181 | 34.906 | 106 | 67 | 1 | 15 | 120 | 64 | 167 | 8.26e-13 | 65.5 |
| Msa0186010 | MtrunA17_Chr7g0240371 | 38.356 | 73 | 43 | 1 | 174 | 246 | 296 | 366 | 5.07e-11 | 62.4 |
| Msa0186010 | MtrunA17_Chr4g0008591 | 42.466 | 73 | 39 | 2 | 174 | 246 | 352 | 421 | 5.83e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186010 | AT1G23380.1 | 50.794 | 252 | 104 | 4 | 17 | 261 | 84 | 322 | 2.38e-82 | 250 |
| Msa0186010 | AT1G70510.1 | 50.201 | 249 | 110 | 3 | 17 | 261 | 68 | 306 | 9.23e-81 | 246 |
| Msa0186010 | AT1G23380.2 | 50.394 | 254 | 104 | 5 | 17 | 261 | 84 | 324 | 2.56e-80 | 245 |
| Msa0186010 | AT1G70510.2 | 49.407 | 253 | 110 | 4 | 17 | 261 | 68 | 310 | 2.47e-78 | 239 |
| Msa0186010 | AT1G62360.1 | 50.202 | 247 | 107 | 4 | 18 | 258 | 121 | 357 | 5.93e-68 | 215 |
| Msa0186010 | AT4G08150.1 | 47.581 | 248 | 116 | 5 | 18 | 258 | 134 | 374 | 1.11e-66 | 213 |
| Msa0186010 | AT1G62990.1 | 34.661 | 251 | 142 | 6 | 15 | 244 | 26 | 275 | 1.78e-39 | 139 |
| Msa0186010 | AT5G25220.2 | 35.200 | 250 | 132 | 6 | 19 | 244 | 160 | 403 | 2.50e-38 | 139 |
| Msa0186010 | AT5G25220.1 | 35.200 | 250 | 132 | 6 | 19 | 244 | 160 | 403 | 2.80e-38 | 139 |
| Msa0186010 | AT5G11060.1 | 35.156 | 256 | 124 | 8 | 19 | 244 | 124 | 367 | 1.90e-37 | 136 |
| Msa0186010 | AT4G32040.2 | 34.146 | 246 | 140 | 5 | 19 | 244 | 119 | 362 | 9.55e-37 | 134 |
| Msa0186010 | AT4G32040.1 | 34.146 | 246 | 140 | 5 | 19 | 244 | 119 | 362 | 1.14e-36 | 134 |
| Msa0186010 | AT1G75430.1 | 49.091 | 55 | 28 | 0 | 192 | 246 | 209 | 263 | 5.16e-11 | 62.4 |
| Msa0186010 | AT5G02030.1 | 46.667 | 60 | 32 | 0 | 187 | 246 | 350 | 409 | 8.75e-11 | 62.4 |
Find 98 sgRNAs with CRISPR-Local
Find 820 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTCTTCTTGAAGAAAT+AGG | 0.173162 | 2_1:+647889 | Msa0186010:CDS |
| TCTCACGGAAAGCATTATTT+TGG | 0.227729 | 2_1:-647924 | None:intergenic |
| ATTTCTCAAGAAAAGGAAAA+AGG | 0.267954 | 2_1:+657824 | Msa0186010:CDS |
| AGGGCATAGGCGTATTGTTC+TGG | 0.295882 | 2_1:-658742 | None:intergenic |
| ATGATGATTAGCCTTGGATT+TGG | 0.302616 | 2_1:+658988 | Msa0186010:three_prime_UTR |
| CTTCTCTTCTTGAAGAAATA+GGG | 0.308161 | 2_1:+647890 | Msa0186010:CDS |
| ACAACCAATCGGATCTAATA+AGG | 0.325364 | 2_1:+647543 | Msa0186010:CDS |
| ATATAAAGCAGATAAATAAT+TGG | 0.326164 | 2_1:+658497 | Msa0186010:CDS |
| TTTACAGTGGGTCATATTGA+TGG | 0.357534 | 2_1:+647438 | Msa0186010:intron |
| TTTACCTGAACGGTTGTAAT+CGG | 0.376328 | 2_1:-648272 | None:intergenic |
| TGTTGCTTCATTGAAGGGCT+TGG | 0.378477 | 2_1:-648185 | None:intergenic |
| ATCCATGACATTCAAGCAAA+AGG | 0.380616 | 2_1:-658680 | None:intergenic |
| GTTTATTCTTATTCTGCTGC+TGG | 0.387145 | 2_1:+647471 | Msa0186010:five_prime_UTR |
| AATAATGCTTTCCGTGAGAT+AGG | 0.392343 | 2_1:+647928 | Msa0186010:CDS |
| GATAGTAGATTTGGATAAAG+AGG | 0.394577 | 2_1:-647611 | None:intergenic |
| TCCTGACCTTGACCACTTCA+TGG | 0.397547 | 2_1:+647957 | Msa0186010:CDS |
| AAATAATGTTGCTTCATTGA+AGG | 0.405931 | 2_1:-648191 | None:intergenic |
| ATTTGTATTACCGTGGGATA+AGG | 0.406677 | 2_1:-657909 | None:intergenic |
| AAGTTTCTTGCTAGAGGTGC+AGG | 0.408023 | 2_1:+658958 | Msa0186010:three_prime_UTR |
| TCCAAGAAAACCTGGGGAAA+AGG | 0.408702 | 2_1:-646885 | None:intergenic |
| TCTGCTGCTGGATTGCATCT+AGG | 0.408994 | 2_1:+647483 | Msa0186010:five_prime_UTR |
| GACAGGAATTTCTCAAGAAA+AGG | 0.410633 | 2_1:+657817 | Msa0186010:CDS |
| ATTATTAGTTATCTGTTTCG+TGG | 0.419970 | 2_1:+658856 | Msa0186010:three_prime_UTR |
| GAAATGCTCCTTCGTAAGTA+CGG | 0.420426 | 2_1:+657774 | Msa0186010:CDS |
| AATAATGTTGCTTCATTGAA+GGG | 0.423656 | 2_1:-648190 | None:intergenic |
| GGATGCAAGAAAAGCATTGA+TGG | 0.424199 | 2_1:+657860 | Msa0186010:CDS |
| GAAAGGAAAGAGTGGAAAGC+TGG | 0.447406 | 2_1:-646957 | None:intergenic |
| GGAAAGGTTGAAGCAGTAGA+AGG | 0.448898 | 2_1:+657699 | Msa0186010:CDS |
| ATTGGTGGAACGTCCACTAT+AGG | 0.452627 | 2_1:+657883 | Msa0186010:CDS |
| TCATCCGATTACAACCGTTC+AGG | 0.455239 | 2_1:+648268 | Msa0186010:CDS |
| GGGTTAGATCACGAGGCAGC+AGG | 0.462846 | 2_1:+657651 | Msa0186010:intron |
| GCTGGGTTGGCTACAGCACC+TGG | 0.465293 | 2_1:-646939 | None:intergenic |
| CCTCTGTAAATTTATTCTGC+AGG | 0.471764 | 2_1:+658610 | Msa0186010:exon |
| AAATGCTCCTTCGTAAGTAC+GGG | 0.472749 | 2_1:+657775 | Msa0186010:CDS |
| TTACAGAGGTCCTGCTATGC+TGG | 0.477108 | 2_1:-658596 | None:intergenic |
| ACCATGAAGTGGTCAAGGTC+AGG | 0.484448 | 2_1:-647958 | None:intergenic |
| TGGGATAAGGCCACCTATAG+TGG | 0.485346 | 2_1:-657896 | None:intergenic |
| TCCATGACATTCAAGCAAAA+GGG | 0.493060 | 2_1:-658679 | None:intergenic |
| CTTCTTTCGCAGATTAAGAC+AGG | 0.496624 | 2_1:-658652 | None:intergenic |
| ATTCCTGTCTTAAGTTGCTA+AGG | 0.503658 | 2_1:-657803 | None:intergenic |
| CAAGAAAAGCATTGATGGAT+TGG | 0.506407 | 2_1:+657865 | Msa0186010:CDS |
| AAAGAGGGTGAGTTGCGATC+TGG | 0.510035 | 2_1:-647595 | None:intergenic |
| GTAAGTAGCACCAGCATAGC+AGG | 0.513299 | 2_1:+658586 | Msa0186010:CDS |
| AGAAGTGGGAAAGGAAAGAG+TGG | 0.525785 | 2_1:-646965 | None:intergenic |
| ATATGATATTAGCTAGGCTT+CGG | 0.529086 | 2_1:+658701 | Msa0186010:three_prime_UTR |
| TCTAATAAGGTTGGATATGA+CGG | 0.529171 | 2_1:+647556 | Msa0186010:CDS |
| AAAGGAAAGAGTGGAAAGCT+GGG | 0.540723 | 2_1:-646956 | None:intergenic |
| AGAAGAGAAGCAAGTTCTGT+TGG | 0.544757 | 2_1:-647877 | None:intergenic |
| GAAGAAACAAACATAAGAAG+TGG | 0.546211 | 2_1:-646980 | None:intergenic |
| ATAGTAGATTTGGATAAAGA+GGG | 0.546531 | 2_1:-647610 | None:intergenic |
| CCAATCGGATCTAATAAGGT+TGG | 0.547810 | 2_1:+647547 | Msa0186010:CDS |
| TCTTTAAGCTCTTTATCACC+TGG | 0.551142 | 2_1:-657753 | None:intergenic |
| ATAGGCGTATTGTTCTGGAT+TGG | 0.551760 | 2_1:-658737 | None:intergenic |
| CCAACCTTATTAGATCCGAT+TGG | 0.554336 | 2_1:-647547 | None:intergenic |
| GAAAAGCATTGATGGATTGG+TGG | 0.555034 | 2_1:+657868 | Msa0186010:CDS |
| TTACCTTAGCAACTTAAGAC+AGG | 0.555596 | 2_1:+657800 | Msa0186010:CDS |
| GAAAGAGTGGAAAGCTGGGT+TGG | 0.556200 | 2_1:-646952 | None:intergenic |
| AATTTGAAGTTTCTTGCTAG+AGG | 0.556900 | 2_1:+658952 | Msa0186010:three_prime_UTR |
| ACAACTAAACGAACTTTGCA+AGG | 0.560050 | 2_1:+648231 | Msa0186010:CDS |
| GAAAATCTCATATCTTCAGA+TGG | 0.560173 | 2_1:-658550 | None:intergenic |
| AGTGGGTCATATTGATGGCA+AGG | 0.560418 | 2_1:+647443 | Msa0186010:intron |
| TCACATGGAACACAACCAAT+CGG | 0.562048 | 2_1:+647532 | Msa0186010:exon |
| CTGCAGCTGTCAGATATGAC+TGG | 0.564508 | 2_1:+658469 | Msa0186010:CDS |
| TTAAGTTCTCTTTACCTGAA+CGG | 0.565840 | 2_1:-648282 | None:intergenic |
| TCAGAGGATGAAATGAGTTG+TGG | 0.568316 | 2_1:+657678 | Msa0186010:CDS |
| CTGTAAATTTATTCTGCAGG+TGG | 0.571978 | 2_1:+658613 | Msa0186010:exon |
| ACCTGGGGAAAAGGAAAGAG+AGG | 0.574069 | 2_1:-646876 | None:intergenic |
| AATATACCATGAAGTGGTCA+AGG | 0.574865 | 2_1:-647963 | None:intergenic |
| TAAAAGAATATACCATGAAG+TGG | 0.580028 | 2_1:-647969 | None:intergenic |
| ACAGACCTACTCAGTGACAT+AGG | 0.581393 | 2_1:-658787 | None:intergenic |
| TCAATCAGAGGAAAAGACAC+TGG | 0.584588 | 2_1:+658524 | Msa0186010:CDS |
| AAGAATACTCTCCAAATCCA+AGG | 0.590642 | 2_1:-658999 | None:intergenic |
| AAGAAACAAACATAAGAAGT+GGG | 0.593665 | 2_1:-646979 | None:intergenic |
| ACAAACATAAGAAGTGGGAA+AGG | 0.594386 | 2_1:-646974 | None:intergenic |
| CAGGATCATCTCCTATCTCA+CGG | 0.597806 | 2_1:-647939 | None:intergenic |
| TCATGGATATGATATTAGCT+AGG | 0.597845 | 2_1:+658695 | Msa0186010:three_prime_UTR |
| CTACTCAGTGACATAGGTGC+CGG | 0.599631 | 2_1:-658781 | None:intergenic |
| CTTTGTGGCACATCATGTCC+AGG | 0.602003 | 2_1:+657735 | Msa0186010:CDS |
| ATTGGTTGTGTTCCATGTGA+AGG | 0.604142 | 2_1:-647529 | None:intergenic |
| GGGGAAAAGGAAAGAGAGGA+AGG | 0.606019 | 2_1:-646872 | None:intergenic |
| GGTGGTCATGATGAACTTTG+TGG | 0.607949 | 2_1:+657720 | Msa0186010:CDS |
| GGTTAGATCACGAGGCAGCA+GGG | 0.610469 | 2_1:+657652 | Msa0186010:intron |
| CTATAGGTGGCCTTATCCCA+CGG | 0.616947 | 2_1:+657899 | Msa0186010:CDS |
| CAACTAAACGAACTTTGCAA+GGG | 0.626350 | 2_1:+648232 | Msa0186010:CDS |
| AACTAAACGAACTTTGCAAG+GGG | 0.629556 | 2_1:+648233 | Msa0186010:CDS |
| ATAATTGGTTCATCAATCAG+AGG | 0.632866 | 2_1:+658512 | Msa0186010:CDS |
| CGGCACCTATGTCACTGAGT+AGG | 0.637662 | 2_1:+658782 | Msa0186010:three_prime_UTR |
| CGAGGCAGCAGGGACATCAG+AGG | 0.640139 | 2_1:+657662 | Msa0186010:CDS |
| AGTTCTTCATAGATACAAAG+AGG | 0.649236 | 2_1:+648156 | Msa0186010:CDS |
| GGTGGAACGTCCACTATAGG+TGG | 0.655633 | 2_1:+657886 | Msa0186010:CDS |
| TAATAATAACTACCTTCACA+TGG | 0.656128 | 2_1:+647517 | Msa0186010:exon |
| GCTGCTGGATTGCATCTAGG+AGG | 0.656462 | 2_1:+647486 | Msa0186010:five_prime_UTR |
| GGATGAAATGAGTTGTGGAA+AGG | 0.661174 | 2_1:+657683 | Msa0186010:CDS |
| AGGCACACACTCTCACAACA+AGG | 0.668052 | 2_1:-646852 | None:intergenic |
| AAGGTTGAAGCAGTAGAAGG+TGG | 0.681013 | 2_1:+657702 | Msa0186010:CDS |
| AATGCTCCTTCGTAAGTACG+GGG | 0.701629 | 2_1:+657776 | Msa0186010:CDS |
| CCTGCAGAATAAATTTACAG+AGG | 0.707916 | 2_1:-658610 | None:intergenic |
| ATGCTCCTTCGTAAGTACGG+GGG | 0.733963 | 2_1:+657777 | Msa0186010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAATTTATATATTAA+AGG | - | chr2_1:654243-654262 | None:intergenic | 0.0% |
| !! | TTAATATATAAATTATATAT+AGG | + | chr2_1:654243-654262 | Msa0186010:intron | 0.0% |
| !! | TTTATAATATTATACGAATA+TGG | + | chr2_1:647055-647074 | Msa0186010:intron | 10.0% |
| !! | AACATATTATATCATATATA+TGG | - | chr2_1:647173-647192 | None:intergenic | 10.0% |
| !! | AAAAAAATATAGTAGAAAAT+TGG | - | chr2_1:648016-648035 | None:intergenic | 10.0% |
| !!! | ATAGGTAAATTATAAAATTT+TGG | + | chr2_1:654261-654280 | Msa0186010:intron | 10.0% |
| !!! | TTTTTTTTTTAAAAAAAAGC+CGG | - | chr2_1:654922-654941 | None:intergenic | 10.0% |
| !! | TATAAAATGAATTTGAATTT+CGG | + | chr2_1:655025-655044 | Msa0186010:intron | 10.0% |
| !! | CTATACATTAAATAAAAATT+TGG | + | chr2_1:655688-655707 | Msa0186010:intron | 10.0% |
| !!! | AATTTTAATAACTACATTTT+TGG | - | chr2_1:655886-655905 | None:intergenic | 10.0% |
| !! | TAGTTATTAAAATTTATTTG+AGG | + | chr2_1:655892-655911 | Msa0186010:intron | 10.0% |
| !!! | AATATTTTTTTTTTGTACAA+TGG | - | chr2_1:656268-656287 | None:intergenic | 10.0% |
| !! | TATTAAAAAAAATTATGTTG+TGG | + | chr2_1:657568-657587 | Msa0186010:intron | 10.0% |
| !! | ATATTATATCATATATATGG+TGG | - | chr2_1:647170-647189 | None:intergenic | 15.0% |
| !!! | TATAGTTTTATACGTATAAT+TGG | + | chr2_1:647310-647329 | Msa0186010:intron | 15.0% |
| !!! | ATATAGAATAAAAAACCTTT+TGG | - | chr2_1:647652-647671 | None:intergenic | 15.0% |
| !! | ATTACATTAATTAAATCAGA+TGG | + | chr2_1:648036-648055 | Msa0186010:intron | 15.0% |
| !!! | AACATTTAATTTATTACACT+TGG | + | chr2_1:648112-648131 | Msa0186010:intron | 15.0% |
| !! | AAAAATATCCAGATATTTAA+AGG | - | chr2_1:648323-648342 | None:intergenic | 15.0% |
| !! | AAATTAACAAAAAATACACA+AGG | + | chr2_1:648679-648698 | Msa0186010:intron | 15.0% |
| !!! | TTTGAAGGATTATTTTTATA+AGG | + | chr2_1:651018-651037 | Msa0186010:intron | 15.0% |
| !! | AAAATCATCAGAAAATTTAA+TGG | + | chr2_1:652133-652152 | Msa0186010:intron | 15.0% |
| !! | AACATAAATATAAATCGTTT+AGG | + | chr2_1:654372-654391 | Msa0186010:intron | 15.0% |
| !! | ATTAAAATCCATATTATTGT+CGG | - | chr2_1:655000-655019 | None:intergenic | 15.0% |
| !!! | TTTAAATGTTCTTTTTGTAT+AGG | - | chr2_1:655549-655568 | None:intergenic | 15.0% |
| !!! | ACGTGAAAATTTTAAAATTT+AGG | - | chr2_1:656875-656894 | None:intergenic | 15.0% |
| !! | TTCATGTCAATATATTAAAA+TGG | - | chr2_1:657357-657376 | None:intergenic | 15.0% |
| !! | TTGATTATATATCTGATAAA+AGG | + | chr2_1:658208-658227 | Msa0186010:intron | 15.0% |
| !!! | TATAATTTGATGAATTTTTC+AGG | + | chr2_1:658435-658454 | Msa0186010:intron | 15.0% |
| !! | ATATAAAGCAGATAAATAAT+TGG | + | chr2_1:658497-658516 | Msa0186010:CDS | 15.0% |
| !!! | ATATTTTTCACTCAATCATA+TGG | + | chr2_1:647688-647707 | Msa0186010:intron | 20.0% |
| !! | ATTAATTAAATCAGATGGAA+TGG | + | chr2_1:648041-648060 | Msa0186010:intron | 20.0% |
| !! | TATTATCGTACATAATTAGA+GGG | - | chr2_1:648459-648478 | None:intergenic | 20.0% |
| !! | TTATTATCGTACATAATTAG+AGG | - | chr2_1:648460-648479 | None:intergenic | 20.0% |
| !! | CTAATTATGTACGATAATAA+TGG | + | chr2_1:648460-648479 | Msa0186010:intron | 20.0% |
| !! | GGAATGATAAATATTTATCA+TGG | - | chr2_1:649137-649156 | None:intergenic | 20.0% |
| !! | AAATTCAAGATTAAGGATTT+GGG | - | chr2_1:649992-650011 | None:intergenic | 20.0% |
| !! | TAAATTCAAGATTAAGGATT+TGG | - | chr2_1:649993-650012 | None:intergenic | 20.0% |
| !!! | AATTTGAAGTTGAATTGAAA+GGG | + | chr2_1:650908-650927 | Msa0186010:intron | 20.0% |
| !! | TATAAGGAAAAATACTTTCA+TGG | + | chr2_1:651034-651053 | Msa0186010:intron | 20.0% |
| !!! | ATTTTTCTTGGTTATAAAAG+TGG | - | chr2_1:651126-651145 | None:intergenic | 20.0% |
| !! | TGATTGTGTAATAGAAAATA+AGG | + | chr2_1:651246-651265 | Msa0186010:intron | 20.0% |
| !! | AAAATTGTTAGAAGTGATAA+TGG | - | chr2_1:651507-651526 | None:intergenic | 20.0% |
| !! | ATAACCTTAATGAAATCTAA+AGG | - | chr2_1:651594-651613 | None:intergenic | 20.0% |
| !!! | AATTGTATTGTGAGTTTTAA+TGG | - | chr2_1:652038-652057 | None:intergenic | 20.0% |
| !!! | TAAGTCTCAAATTTTGTTAA+TGG | - | chr2_1:652834-652853 | None:intergenic | 20.0% |
| !!! | GTTTTACACAATAACATATA+TGG | + | chr2_1:653979-653998 | Msa0186010:intron | 20.0% |
| !! | ATAAAGCCAAAAAACATTTA+GGG | - | chr2_1:654582-654601 | None:intergenic | 20.0% |
| !!! | TTTTTTGGCTTTATGTTATT+TGG | + | chr2_1:654588-654607 | Msa0186010:intron | 20.0% |
| !!! | TGTTATTTGGATTATTTGTA+AGG | + | chr2_1:654601-654620 | Msa0186010:intron | 20.0% |
| !!! | TTTCTTTGTCAAACTTTTTT+CGG | + | chr2_1:654844-654863 | Msa0186010:intron | 20.0% |
| !!! | GTTAAACAAATTTTTGCTAT+GGG | - | chr2_1:655056-655075 | None:intergenic | 20.0% |
| !!! | TGTTAAACAAATTTTTGCTA+TGG | - | chr2_1:655057-655076 | None:intergenic | 20.0% |
| !! | ATATTTGCATTCATCTAATA+TGG | + | chr2_1:655142-655161 | Msa0186010:intron | 20.0% |
| !!! | TGTTTTTCAATGAAGATTAT+TGG | + | chr2_1:655187-655206 | Msa0186010:intron | 20.0% |
| !!! | AAATTCAAGTTTAGTTTAGT+TGG | + | chr2_1:655494-655513 | Msa0186010:intron | 20.0% |
| !!! | AATTCAAGTTTAGTTTAGTT+GGG | + | chr2_1:655495-655514 | Msa0186010:intron | 20.0% |
| !! | TCCAATATAAAAACTTAACT+TGG | + | chr2_1:655777-655796 | Msa0186010:intron | 20.0% |
| !!! | AAATTTATTTGAGGTTTGAT+AGG | + | chr2_1:655901-655920 | Msa0186010:intron | 20.0% |
| !!! | AATTTATTTGAGGTTTGATA+GGG | + | chr2_1:655902-655921 | Msa0186010:intron | 20.0% |
| !!! | GGTTTTAATATCAAATTGAT+TGG | + | chr2_1:656006-656025 | Msa0186010:intron | 20.0% |
| !! | ATTGAATTTCTATAAAACAG+TGG | + | chr2_1:657084-657103 | Msa0186010:intron | 20.0% |
| !! | TCTCACTAATAATAAAATGT+TGG | + | chr2_1:657322-657341 | Msa0186010:intron | 20.0% |
| !! | ACTAATAATAAAATGTTGGA+GGG | + | chr2_1:657326-657345 | Msa0186010:intron | 20.0% |
| !!! | TTGTACTAATTAAGTTGATA+TGG | + | chr2_1:657517-657536 | Msa0186010:intron | 20.0% |
| !!! | ATTTCATTTTGTCCTTTTTT+TGG | + | chr2_1:657630-657649 | Msa0186010:intron | 20.0% |
| !!! | TTTCATTTTGTCCTTTTTTT+GGG | + | chr2_1:657631-657650 | Msa0186010:intron | 20.0% |
| !! | TCATCAAATTATAATCTATC+AGG | - | chr2_1:658428-658447 | None:intergenic | 20.0% |
| !!! | AGATATGAGATTTTCTATTA+TGG | + | chr2_1:658558-658577 | Msa0186010:CDS | 20.0% |
| ! | GGAAAAGAAAAGCAAAAATA+AGG | + | chr2_1:646905-646924 | Msa0186010:five_prime_UTR | 25.0% |
| ! | AAGAAACAAACATAAGAAGT+GGG | - | chr2_1:646982-647001 | None:intergenic | 25.0% |
| ! | GTATAAAACTATAGTACTAC+TGG | - | chr2_1:647303-647322 | None:intergenic | 25.0% |
| ! | TAATAATAACTACCTTCACA+TGG | + | chr2_1:647517-647536 | Msa0186010:exon | 25.0% |
| ! | ATAGTAGATTTGGATAAAGA+GGG | - | chr2_1:647613-647632 | None:intergenic | 25.0% |
| ! | AAAAAAGCAGATAGTAGATT+TGG | - | chr2_1:647623-647642 | None:intergenic | 25.0% |
| ! | ATACTATATATTGTGCATGA+AGG | + | chr2_1:647846-647865 | Msa0186010:intron | 25.0% |
| ! | TAAAAGAATATACCATGAAG+TGG | - | chr2_1:647972-647991 | None:intergenic | 25.0% |
| ! | ATATAGTAGAAAATTGGACT+TGG | - | chr2_1:648010-648029 | None:intergenic | 25.0% |
| !! | ATTTATTACACTTGGTGATT+AGG | + | chr2_1:648120-648139 | Msa0186010:intron | 25.0% |
| !! | AATAATGTTGCTTCATTGAA+GGG | - | chr2_1:648193-648212 | None:intergenic | 25.0% |
| !! | AAATAATGTTGCTTCATTGA+AGG | - | chr2_1:648194-648213 | None:intergenic | 25.0% |
| ! | TCATAATGCCTTTAAATATC+TGG | + | chr2_1:648312-648331 | Msa0186010:intron | 25.0% |
| ! | TCGTGTTACAAAAAAGAAAA+GGG | - | chr2_1:648432-648451 | None:intergenic | 25.0% |
| ! | TTCGTGTTACAAAAAAGAAA+AGG | - | chr2_1:648433-648452 | None:intergenic | 25.0% |
| !!! | TTTCTTTTTTGTAACACGAA+TGG | + | chr2_1:648433-648452 | Msa0186010:intron | 25.0% |
| ! | GTTACAATGATCTCTTATAT+AGG | + | chr2_1:648846-648865 | Msa0186010:intron | 25.0% |
| !! | CTTATATAGGTTGTTATTGT+AGG | + | chr2_1:648859-648878 | Msa0186010:intron | 25.0% |
| ! | AACTAACTTCCTAGTTTATA+GGG | - | chr2_1:648934-648953 | None:intergenic | 25.0% |
| ! | TAACTAACTTCCTAGTTTAT+AGG | - | chr2_1:648935-648954 | None:intergenic | 25.0% |
| ! | AATATTTATCATTCCAAGCT+TGG | + | chr2_1:649142-649161 | Msa0186010:intron | 25.0% |
| ! | GATATAAATTGGTTGAACTT+TGG | + | chr2_1:649164-649183 | Msa0186010:intron | 25.0% |
| ! | AATTCAAGATTAAGGATTTG+GGG | - | chr2_1:649991-650010 | None:intergenic | 25.0% |
| ! | AGATGCTAAATTCAAGATTA+AGG | - | chr2_1:649999-650018 | None:intergenic | 25.0% |
| !!! | TTATGTTGATGACATCATAT+TGG | - | chr2_1:650065-650084 | None:intergenic | 25.0% |
| ! | ATGCATTGTTAACATCTAAT+TGG | + | chr2_1:650317-650336 | Msa0186010:intron | 25.0% |
| !!! | AGAAAGTATCAAAAAAATCC+AGG | + | chr2_1:650410-650429 | Msa0186010:intron | 25.0% |
| ! | AGTACTTTGAGTAATAGAAA+TGG | + | chr2_1:650660-650679 | Msa0186010:intron | 25.0% |
| ! | AAAAGAGTGAAAATCAGTAA+TGG | + | chr2_1:650714-650733 | Msa0186010:intron | 25.0% |
| ! | AAAGAGTGAAAATCAGTAAT+GGG | + | chr2_1:650715-650734 | Msa0186010:intron | 25.0% |
| ! | CTTGTAGATTTATGTATAAC+AGG | + | chr2_1:650829-650848 | Msa0186010:intron | 25.0% |
| !! | GAATTTGAAGTTGAATTGAA+AGG | + | chr2_1:650907-650926 | Msa0186010:intron | 25.0% |
| !!! | CCAAAGAAATTTTTGTTTCT+AGG | - | chr2_1:651071-651090 | None:intergenic | 25.0% |
| ! | CCTAGAAACAAAAATTTCTT+TGG | + | chr2_1:651068-651087 | Msa0186010:intron | 25.0% |
| !! | ATGCATCAATTGAAAGTTTT+TGG | - | chr2_1:651216-651235 | None:intergenic | 25.0% |
| ! | AGGTGTTTGATTGTTTAAAA+TGG | + | chr2_1:651266-651285 | Msa0186010:intron | 25.0% |
| !! | GGTGTTTGATTGTTTAAAAT+GGG | + | chr2_1:651267-651286 | Msa0186010:intron | 25.0% |
| !! | GTGTTTGATTGTTTAAAATG+GGG | + | chr2_1:651268-651287 | Msa0186010:intron | 25.0% |
| ! | TTCACCTTTAGATTTCATTA+AGG | + | chr2_1:651587-651606 | Msa0186010:intron | 25.0% |
| !!! | ATGATTTTAGTAGATTCACT+TGG | - | chr2_1:651617-651636 | None:intergenic | 25.0% |
| ! | TGAACAGAAGAAATTGAAAT+AGG | + | chr2_1:651666-651685 | Msa0186010:intron | 25.0% |
| !!! | ATTGATGCATTTTGACATTT+GGG | - | chr2_1:651694-651713 | None:intergenic | 25.0% |
| !!! | AATTGATGCATTTTGACATT+TGG | - | chr2_1:651695-651714 | None:intergenic | 25.0% |
| ! | TCAAAATGCATCAATTCAAA+GGG | + | chr2_1:651699-651718 | Msa0186010:intron | 25.0% |
| ! | TTATTACAACTTTCAGGAAA+TGG | + | chr2_1:651732-651751 | Msa0186010:intron | 25.0% |
| ! | TTAGAATCTACATAGACAAA+AGG | + | chr2_1:651798-651817 | Msa0186010:intron | 25.0% |
| ! | ATGAGATTAAAGTGAAATTC+AGG | + | chr2_1:652086-652105 | Msa0186010:intron | 25.0% |
| ! | TGAGATTAAAGTGAAATTCA+GGG | + | chr2_1:652087-652106 | Msa0186010:intron | 25.0% |
| ! | ACTAACATAAAACTTCCTAA+TGG | - | chr2_1:652188-652207 | None:intergenic | 25.0% |
| !!! | TTAGGAAGTTTTATGTTAGT+AGG | + | chr2_1:652188-652207 | Msa0186010:intron | 25.0% |
| ! | ACATTTGTGGAAATCTAAAA+TGG | - | chr2_1:652238-652257 | None:intergenic | 25.0% |
| !! | ACAATTTTACTCTAAGTTCT+TGG | - | chr2_1:652286-652305 | None:intergenic | 25.0% |
| !! | TTTGAATGAGAATTTTGCTA+TGG | - | chr2_1:652858-652877 | None:intergenic | 25.0% |
| !! | TGCATTTTCCATGAAAATTA+TGG | + | chr2_1:653141-653160 | Msa0186010:intron | 25.0% |
| ! | GTTACAATGATCTCTTATAT+AGG | + | chr2_1:648846-648865 | Msa0186010:intron | 25.0% |
| !! | CTTATATAGGTTGTTATTGT+AGG | + | chr2_1:648859-648878 | Msa0186010:intron | 25.0% |
| ! | AACTAACTTCCTAGTTTATA+GGG | - | chr2_1:648934-648953 | None:intergenic | 25.0% |
| ! | TAACTAACTTCCTAGTTTAT+AGG | - | chr2_1:648935-648954 | None:intergenic | 25.0% |
| ! | ATTAATTACATCCACAATTG+AGG | + | chr2_1:654055-654074 | Msa0186010:intron | 25.0% |
| ! | CTGCAATTAGAATAATGATA+TGG | + | chr2_1:654080-654099 | Msa0186010:intron | 25.0% |
| !!! | TTAGGGATTTTTTTTGCATA+AGG | + | chr2_1:654547-654566 | Msa0186010:intron | 25.0% |
| ! | CATAAAGCCAAAAAACATTT+AGG | - | chr2_1:654583-654602 | None:intergenic | 25.0% |
| ! | TTTAATATATCGTTTCCTTC+CGG | + | chr2_1:654900-654919 | Msa0186010:intron | 25.0% |
| !!! | TTTTTTAAAAAAAAGCCGGA+AGG | - | chr2_1:654918-654937 | None:intergenic | 25.0% |
| ! | AGATGAATGCAAATATACAA+TGG | - | chr2_1:655138-655157 | None:intergenic | 25.0% |
| !!! | CAGTATTTTTGTGAAAATTC+GGG | - | chr2_1:655351-655370 | None:intergenic | 25.0% |
| !!! | GCAGTATTTTTGTGAAAATT+CGG | - | chr2_1:655352-655371 | None:intergenic | 25.0% |
| ! | TTACCAAAGAAATTGAATGT+GGG | - | chr2_1:655476-655495 | None:intergenic | 25.0% |
| ! | TTTACCAAAGAAATTGAATG+TGG | - | chr2_1:655477-655496 | None:intergenic | 25.0% |
| !! | GCCAAGTTAAGTTTTTATAT+TGG | - | chr2_1:655781-655800 | None:intergenic | 25.0% |
| ! | TGATCAAATCACAAAACTAA+AGG | + | chr2_1:656030-656049 | Msa0186010:intron | 25.0% |
| ! | GATCAAATCACAAAACTAAA+GGG | + | chr2_1:656031-656050 | Msa0186010:intron | 25.0% |
| ! | TATGGTCTACAATTAAAACT+TGG | - | chr2_1:656176-656195 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTACAATGGAGA+CGG | - | chr2_1:656262-656281 | None:intergenic | 25.0% |
| !! | ATTTTTGTATATCATCACAG+TGG | + | chr2_1:656285-656304 | Msa0186010:intron | 25.0% |
| ! | ATTTAATTCAGATACTTCGT+GGG | - | chr2_1:656566-656585 | None:intergenic | 25.0% |
| ! | TATTTAATTCAGATACTTCG+TGG | - | chr2_1:656567-656586 | None:intergenic | 25.0% |
| !! | GAAGTATCTTATAAGTATCT+TGG | - | chr2_1:656645-656664 | None:intergenic | 25.0% |
| ! | ACATATCCTAGAAAAAATGA+AGG | + | chr2_1:656671-656690 | Msa0186010:intron | 25.0% |
| ! | CATATCCTAGAAAAAATGAA+GGG | + | chr2_1:656672-656691 | Msa0186010:intron | 25.0% |
| !!! | TTTTACCCTTCATTTTTTCT+AGG | - | chr2_1:656680-656699 | None:intergenic | 25.0% |
| ! | ACAACACATAAAATTTACCT+TGG | - | chr2_1:657205-657224 | None:intergenic | 25.0% |
| ! | GTACGTGAAATAAAATGATT+GGG | - | chr2_1:657274-657293 | None:intergenic | 25.0% |
| ! | CACTAATAATAAAATGTTGG+AGG | + | chr2_1:657325-657344 | Msa0186010:intron | 25.0% |
| ! | CTAATAATAAAATGTTGGAG+GGG | + | chr2_1:657327-657346 | Msa0186010:intron | 25.0% |
| ! | TAATAATAAAATGTTGGAGG+GGG | + | chr2_1:657328-657347 | Msa0186010:intron | 25.0% |
| !! | ATTGAAGCTATAGAAAGTAT+AGG | + | chr2_1:657379-657398 | Msa0186010:intron | 25.0% |
| !! | TTGAAGCTATAGAAAGTATA+GGG | + | chr2_1:657380-657399 | Msa0186010:intron | 25.0% |
| ! | ATTTCTCAAGAAAAGGAAAA+AGG | + | chr2_1:657824-657843 | Msa0186010:CDS | 25.0% |
| ! | TTTCTCAAGAAAAGGAAAAA+GGG | + | chr2_1:657825-657844 | Msa0186010:CDS | 25.0% |
| !! | TGTTTGTACTAGAAAACTTT+TGG | + | chr2_1:658263-658282 | Msa0186010:intron | 25.0% |
| !!! | AATTTGATGAATTTTTCAGG+AGG | + | chr2_1:658438-658457 | Msa0186010:intron | 25.0% |
| !! | TATGAGATTTTCTATTATGG+AGG | + | chr2_1:658561-658580 | Msa0186010:CDS | 25.0% |
| !! | ATGAGATTTTCTATTATGGA+GGG | + | chr2_1:658562-658581 | Msa0186010:CDS | 25.0% |
| ! | ATTATTAGTTATCTGTTTCG+TGG | + | chr2_1:658856-658875 | Msa0186010:three_prime_UTR | 25.0% |
| ! | TTTCTTTTCCAAGAAAACCT+GGG | - | chr2_1:646895-646914 | None:intergenic | 30.0% |
| ! | TTTTCTTTTCCAAGAAAACC+TGG | - | chr2_1:646896-646915 | None:intergenic | 30.0% |
| AGAAAAGCAAAAATAAGGTC+TGG | + | chr2_1:646910-646929 | Msa0186010:five_prime_UTR | 30.0% | |
| GAAGAAACAAACATAAGAAG+TGG | - | chr2_1:646983-647002 | None:intergenic | 30.0% | |
| ! | TATGGATTATATTCTCCACT+AGG | + | chr2_1:647073-647092 | Msa0186010:intron | 30.0% |
| !!! | AGGTTTTTTATTTCACCTAG+TGG | - | chr2_1:647091-647110 | None:intergenic | 30.0% |
| GGTGAAATAAAAAACCTACA+CGG | + | chr2_1:647094-647113 | Msa0186010:intron | 30.0% | |
| GTGAAATAAAAAACCTACAC+GGG | + | chr2_1:647095-647114 | Msa0186010:intron | 30.0% | |
| CAAGTGAGTTTAGATATACA+TGG | + | chr2_1:647387-647406 | Msa0186010:intron | 30.0% | |
| TCTAATAAGGTTGGATATGA+CGG | + | chr2_1:647556-647575 | Msa0186010:CDS | 30.0% | |
| GATAGTAGATTTGGATAAAG+AGG | - | chr2_1:647614-647633 | None:intergenic | 30.0% | |
| !!! | TGCTTTTTTAGAATGCCAAA+AGG | + | chr2_1:647634-647653 | Msa0186010:CDS | 30.0% |
| TATATATTGTGCATGAAGGT+TGG | + | chr2_1:647850-647869 | Msa0186010:intron | 30.0% | |
| ATATATTGTGCATGAAGGTT+GGG | + | chr2_1:647851-647870 | Msa0186010:intron | 30.0% | |
| CTTCTCTTCTTGAAGAAATA+GGG | + | chr2_1:647890-647909 | Msa0186010:CDS | 30.0% | |
| AGTTCTTCATAGATACAAAG+AGG | + | chr2_1:648156-648175 | Msa0186010:CDS | 30.0% | |
| TTAAGTTCTCTTTACCTGAA+CGG | - | chr2_1:648285-648304 | None:intergenic | 30.0% | |
| TCAGGTAAAGAGAACTTAAT+TGG | + | chr2_1:648286-648305 | Msa0186010:intron | 30.0% | |
| ! | TGGTTACTCAACATTCTTTT+TGG | - | chr2_1:648751-648770 | None:intergenic | 30.0% |
| ! | TCTCTTTTCTTCAATGTTCT+TGG | - | chr2_1:648771-648790 | None:intergenic | 30.0% |
| TGTTGAAACACAGTACAAAA+AGG | - | chr2_1:649097-649116 | None:intergenic | 30.0% | |
| TTCCAAGCTTGGATATAAAT+TGG | + | chr2_1:649153-649172 | Msa0186010:intron | 30.0% | |
| AACCAATTTATATCCAAGCT+TGG | - | chr2_1:649158-649177 | None:intergenic | 30.0% | |
| ATAAATTGGTTGAACTTTGG+AGG | + | chr2_1:649167-649186 | Msa0186010:intron | 30.0% | |
| TATATCAACACATGAGCAAT+TGG | - | chr2_1:649219-649238 | None:intergenic | 30.0% | |
| ! | AATTGCTCATGTGTTGATAT+AGG | + | chr2_1:649218-649237 | Msa0186010:intron | 30.0% |
| GTCAGAGAAAAGATTCAAAA+AGG | - | chr2_1:649260-649279 | None:intergenic | 30.0% | |
| ! | TTTGAATCTTTTCTCTGACA+AGG | + | chr2_1:649261-649280 | Msa0186010:intron | 30.0% |
| ! | TGACTTTCAAGTCCTTTAAA+AGG | + | chr2_1:649390-649409 | Msa0186010:intron | 30.0% |
| CTTTGTAATGTGTGATTGTT+GGG | + | chr2_1:649684-649703 | Msa0186010:intron | 30.0% | |
| TTTGTAATGTGTGATTGTTG+GGG | + | chr2_1:649685-649704 | Msa0186010:intron | 30.0% | |
| !! | AACTTGAGAGAAGTATCTAA+AGG | + | chr2_1:649839-649858 | Msa0186010:intron | 30.0% |
| CCTCAAATATTTCTTAGGAT+TGG | - | chr2_1:649966-649985 | None:intergenic | 30.0% | |
| CCAATCCTAAGAAATATTTG+AGG | + | chr2_1:649963-649982 | Msa0186010:intron | 30.0% | |
| CTTGAATTTAGCATCTAGAA+TGG | + | chr2_1:650003-650022 | Msa0186010:intron | 30.0% | |
| GTTATGTTGAAGAGTGAATA+AGG | + | chr2_1:650108-650127 | Msa0186010:intron | 30.0% | |
| AAACTGCAGAAAAGTCTTTA+TGG | - | chr2_1:650220-650239 | None:intergenic | 30.0% | |
| TATTCATGAGTATACCAGAA+GGG | - | chr2_1:650270-650289 | None:intergenic | 30.0% | |
| GTTAACAATGCATTTCTTCA+TGG | - | chr2_1:650310-650329 | None:intergenic | 30.0% | |
| !!! | TAAATGCCAGTTTTGAATAG+AGG | + | chr2_1:650342-650361 | Msa0186010:intron | 30.0% |
| GGTATATAGAGTGAAACATA+AGG | - | chr2_1:650500-650519 | None:intergenic | 30.0% | |
| GGCTATGAATGATGAATTAA+AGG | - | chr2_1:650593-650612 | None:intergenic | 30.0% | |
| !!! | GACTGATTTTGATGATGAAA+TGG | + | chr2_1:650756-650775 | Msa0186010:intron | 30.0% |
| ATGTAATCTTTCAAATAGCC+CGG | + | chr2_1:650793-650812 | Msa0186010:intron | 30.0% | |
| GTAGATTTATGTATAACAGG+TGG | + | chr2_1:650832-650851 | Msa0186010:intron | 30.0% | |
| TAATCCTTCAAATGTCTCAT+GGG | - | chr2_1:651010-651029 | None:intergenic | 30.0% | |
| ATAATCCTTCAAATGTCTCA+TGG | - | chr2_1:651011-651030 | None:intergenic | 30.0% | |
| GGTTATAAAAGTGGTATGAA+AGG | - | chr2_1:651117-651136 | None:intergenic | 30.0% | |
| !! | GCAAGAAAGTGTATTTTTCT+TGG | - | chr2_1:651138-651157 | None:intergenic | 30.0% |
| ! | GCATATGACCAAAAAGTTTT+AGG | + | chr2_1:651330-651349 | Msa0186010:intron | 30.0% |
| !!! | ACCAAAAAGTTTTAGGTAAG+TGG | + | chr2_1:651337-651356 | Msa0186010:intron | 30.0% |
| !!! | CCAAAAAGTTTTAGGTAAGT+GGG | + | chr2_1:651338-651357 | Msa0186010:intron | 30.0% |
| !! | TTGATGCATTTTGACATTTG+GGG | - | chr2_1:651693-651712 | None:intergenic | 30.0% |
| GTCAAAATGCATCAATTCAA+AGG | + | chr2_1:651698-651717 | Msa0186010:intron | 30.0% | |
| !! | TCAGCTTTATTACAACTTTC+AGG | + | chr2_1:651726-651745 | Msa0186010:intron | 30.0% |
| ! | TAAGGACTTCATTCTAGAAA+AGG | + | chr2_1:651833-651852 | Msa0186010:intron | 30.0% |
| AAGAAAACCAAGAAGATGAT+TGG | - | chr2_1:651993-652012 | None:intergenic | 30.0% | |
| TTAACTATGGCAAATCAATC+TGG | - | chr2_1:652161-652180 | None:intergenic | 30.0% | |
| TCCTAATGGTCATTTAACTA+TGG | - | chr2_1:652174-652193 | None:intergenic | 30.0% | |
| ATCTGCTAATCATATTGCAA+AGG | - | chr2_1:652537-652556 | None:intergenic | 30.0% | |
| ! | AAGAACCAAAAGTCTTTTGA+AGG | + | chr2_1:652558-652577 | Msa0186010:intron | 30.0% |
| ATCAAAACTGAATCTTCACT+AGG | + | chr2_1:652737-652756 | Msa0186010:intron | 30.0% | |
| ! | GTTTTACAACATGAAAGACA+AGG | - | chr2_1:652776-652795 | None:intergenic | 30.0% |
| TCTTTCATGTTGTAAAACCA+TGG | + | chr2_1:652778-652797 | Msa0186010:intron | 30.0% | |
| ! | CATGAACAAAATCTTTTCCA+TGG | - | chr2_1:652798-652817 | None:intergenic | 30.0% |
| ! | CATGGAAAAGATTTTGTTCA+TGG | + | chr2_1:652796-652815 | Msa0186010:intron | 30.0% |
| ! | GAAAAGATTTTGTTCATGGA+AGG | + | chr2_1:652800-652819 | Msa0186010:intron | 30.0% |
| ! | ATTTTGTTCATGGAAGGTAA+TGG | + | chr2_1:652806-652825 | Msa0186010:intron | 30.0% |
| TATGCAATTAGATTTCTCAC+TGG | - | chr2_1:652881-652900 | None:intergenic | 30.0% | |
| AATCTTCAACTCAGAGTAAA+AGG | + | chr2_1:653006-653025 | Msa0186010:intron | 30.0% | |
| ! | AAGATTTTCTCAAGGAGATT+TGG | - | chr2_1:653095-653114 | None:intergenic | 30.0% |
| ! | CTGAAAGAAAGATTTTCTCA+AGG | - | chr2_1:653103-653122 | None:intergenic | 30.0% |
| ! | TGCACAATCCATAATTTTCA+TGG | - | chr2_1:653152-653171 | None:intergenic | 30.0% |
| AGATACAGAATTTACAATCC+AGG | + | chr2_1:653180-653199 | Msa0186010:intron | 30.0% | |
| ATGAAGTTTGAATTCGTTGA+CGG | - | chr2_1:653280-653299 | None:intergenic | 30.0% | |
| ! | TCTCTTTTCTTCAATGTTCT+TGG | - | chr2_1:648771-648790 | None:intergenic | 30.0% |
| TGTTGAAACACAGTACAAAA+AGG | - | chr2_1:649097-649116 | None:intergenic | 30.0% | |
| ! | TACTTGCTGACAAAGTTATA+GGG | - | chr2_1:654190-654209 | None:intergenic | 30.0% |
| ! | ATACTTGCTGACAAAGTTAT+AGG | - | chr2_1:654191-654210 | None:intergenic | 30.0% |
| !!! | GTGCCTAAATGATTTTGATT+TGG | + | chr2_1:654488-654507 | Msa0186010:intron | 30.0% |
| ACGCCAAATCAAAATCATTT+AGG | - | chr2_1:654494-654513 | None:intergenic | 30.0% | |
| ! | TTTCTCACTAGTACTAGTTT+AGG | + | chr2_1:654529-654548 | Msa0186010:intron | 30.0% |
| ! | TTCTCACTAGTACTAGTTTA+GGG | + | chr2_1:654530-654549 | Msa0186010:intron | 30.0% |
| !!! | AAAGCTCCCTAAATGTTTTT+TGG | + | chr2_1:654573-654592 | Msa0186010:intron | 30.0% |
| TAAAACTTCAGTTCTATTGG+TGG | + | chr2_1:654683-654702 | Msa0186010:intron | 30.0% | |
| TCGACTTTGACTATCAATTA+TGG | + | chr2_1:654734-654753 | Msa0186010:intron | 30.0% | |
| ACTTTGACTATCAATTATGG+AGG | + | chr2_1:654737-654756 | Msa0186010:intron | 30.0% | |
| ! | TTTGTTGTCCGACAATAATA+TGG | + | chr2_1:654989-655008 | Msa0186010:intron | 30.0% |
| ! | ACAATGGTACTCATAGATTT+TGG | - | chr2_1:655122-655141 | None:intergenic | 30.0% |
| ACACACTAATATATAGGCAA+CGG | + | chr2_1:655287-655306 | Msa0186010:intron | 30.0% | |
| !! | TTTTTGTGAAAATTCGGGTT+GGG | - | chr2_1:655346-655365 | None:intergenic | 30.0% |
| ! | ATTTTTGTGAAAATTCGGGT+TGG | - | chr2_1:655347-655366 | None:intergenic | 30.0% |
| ! | AGTTTAGTTTAGTTGGGTTT+CGG | + | chr2_1:655501-655520 | Msa0186010:intron | 30.0% |
| ! | GTATAGGTTTGCTTTGAATT+TGG | - | chr2_1:655533-655552 | None:intergenic | 30.0% |
| AATGTATAGCTCTTCAATGA+AGG | - | chr2_1:655677-655696 | None:intergenic | 30.0% | |
| TTGACTCATTCTTACATGAA+CGG | - | chr2_1:655756-655775 | None:intergenic | 30.0% | |
| CAATCCAATCTCAAATACAT+GGG | + | chr2_1:655979-655998 | Msa0186010:intron | 30.0% | |
| ! | AATTCCCATGTATTTGAGAT+TGG | - | chr2_1:655986-656005 | None:intergenic | 30.0% |
| AATCTCAAATACATGGGAAT+TGG | + | chr2_1:655985-656004 | Msa0186010:intron | 30.0% | |
| ! | TTTACATGTGAGTTTTCCAA+TGG | + | chr2_1:656398-656417 | Msa0186010:intron | 30.0% |
| !! | TGAAGTATTGGTATCTGATA+CGG | - | chr2_1:656479-656498 | None:intergenic | 30.0% |
| TATCAGATACCAATACTTCA+CGG | + | chr2_1:656479-656498 | Msa0186010:intron | 30.0% | |
| ! | TAAGTATCTTGGTGTATATG+TGG | - | chr2_1:656634-656653 | None:intergenic | 30.0% |
| GACAATGATGTGAAATTCAA+TGG | + | chr2_1:656706-656725 | Msa0186010:intron | 30.0% | |
| TTCTATAAAACAGTGGTTTC+TGG | + | chr2_1:657091-657110 | Msa0186010:intron | 30.0% | |
| ! | GTAATGAAATGGGAATGTTT+TGG | + | chr2_1:657127-657146 | Msa0186010:intron | 30.0% |
| CTATTATATAGTTGCATGCA+TGG | + | chr2_1:657150-657169 | Msa0186010:intron | 30.0% | |
| GGAATATACTTGAAATTCCA+AGG | + | chr2_1:657185-657204 | Msa0186010:intron | 30.0% | |
| CGTACGTGAAATAAAATGAT+TGG | - | chr2_1:657275-657294 | None:intergenic | 30.0% | |
| TGAAAGCGAAAGTTAATTGT+TGG | + | chr2_1:657295-657314 | Msa0186010:intron | 30.0% | |
| AATAATAAAATGTTGGAGGG+GGG | + | chr2_1:657329-657348 | Msa0186010:intron | 30.0% | |
| CTCATTCGGCATATAATAAT+TGG | + | chr2_1:657407-657426 | Msa0186010:intron | 30.0% | |
| ! | TTTTGTTGAATGTGTGTACA+TGG | - | chr2_1:657482-657501 | None:intergenic | 30.0% |
| ATTGGAATTTGTATTACCGT+GGG | - | chr2_1:657918-657937 | None:intergenic | 30.0% | |
| AATTGGAATTTGTATTACCG+TGG | - | chr2_1:657919-657938 | None:intergenic | 30.0% | |
| GCATGTTGTGTGATATTAAT+TGG | - | chr2_1:657936-657955 | None:intergenic | 30.0% | |
| ! | ATCCTGACTGGAATAATTTT+TGG | + | chr2_1:658065-658084 | Msa0186010:intron | 30.0% |
| ! | ATAATTGGTTCATCAATCAG+AGG | + | chr2_1:658512-658531 | Msa0186010:CDS | 30.0% |
| GAAAATCTCATATCTTCAGA+TGG | - | chr2_1:658553-658572 | None:intergenic | 30.0% | |
| TCATGGATATGATATTAGCT+AGG | + | chr2_1:658695-658714 | Msa0186010:three_prime_UTR | 30.0% | |
| ATATGATATTAGCTAGGCTT+CGG | + | chr2_1:658701-658720 | Msa0186010:three_prime_UTR | 30.0% | |
| GAAAAATTAACATAGGGCAT+AGG | - | chr2_1:658758-658777 | None:intergenic | 30.0% | |
| CGGTTCGAAAAATTAACATA+GGG | - | chr2_1:658764-658783 | None:intergenic | 30.0% | |
| !! | CCTATGTTAATTTTTCGAAC+CGG | + | chr2_1:658762-658781 | Msa0186010:three_prime_UTR | 30.0% |
| ! | AATTTGAAGTTTCTTGCTAG+AGG | + | chr2_1:658952-658971 | Msa0186010:three_prime_UTR | 30.0% |
| !!! | TTTTAGATGATGATTAGCCT+TGG | + | chr2_1:658982-659001 | Msa0186010:three_prime_UTR | 30.0% |
| ! | TTCTTTTCCAAGAAAACCTG+GGG | - | chr2_1:646894-646913 | None:intergenic | 35.0% |
| ACAAACATAAGAAGTGGGAA+AGG | - | chr2_1:646977-646996 | None:intergenic | 35.0% | |
| CAGTCAAACAAAAGGAGATT+AGG | - | chr2_1:647276-647295 | None:intergenic | 35.0% | |
| TTGACTCAATGTTAACTGAC+AGG | - | chr2_1:647370-647389 | None:intergenic | 35.0% | |
| GTAAAAGGACATTCAACTTG+TGG | - | chr2_1:647423-647442 | None:intergenic | 35.0% | |
| ! | AGTTGAATGTCCTTTTACAG+TGG | + | chr2_1:647425-647444 | Msa0186010:intron | 35.0% |
| ! | GTTGAATGTCCTTTTACAGT+GGG | + | chr2_1:647426-647445 | Msa0186010:intron | 35.0% |
| TCAATATGACCCACTGTAAA+AGG | - | chr2_1:647438-647457 | None:intergenic | 35.0% | |
| TTTACAGTGGGTCATATTGA+TGG | + | chr2_1:647438-647457 | Msa0186010:intron | 35.0% | |
| GTTTATTCTTATTCTGCTGC+TGG | + | chr2_1:647471-647490 | Msa0186010:five_prime_UTR | 35.0% | |
| ACAACCAATCGGATCTAATA+AGG | + | chr2_1:647543-647562 | Msa0186010:CDS | 35.0% | |
| TATATTGTGCATGAAGGTTG+GGG | + | chr2_1:647852-647871 | Msa0186010:intron | 35.0% | |
| GCTTCTCTTCTTGAAGAAAT+AGG | + | chr2_1:647889-647908 | Msa0186010:CDS | 35.0% | |
| !!! | TCTCACGGAAAGCATTATTT+TGG | - | chr2_1:647927-647946 | None:intergenic | 35.0% |
| AATAATGCTTTCCGTGAGAT+AGG | + | chr2_1:647928-647947 | Msa0186010:CDS | 35.0% | |
| AATATACCATGAAGTGGTCA+AGG | - | chr2_1:647966-647985 | None:intergenic | 35.0% | |
| ACAACTAAACGAACTTTGCA+AGG | + | chr2_1:648231-648250 | Msa0186010:CDS | 35.0% | |
| CAACTAAACGAACTTTGCAA+GGG | + | chr2_1:648232-648251 | Msa0186010:CDS | 35.0% | |
| AACTAAACGAACTTTGCAAG+GGG | + | chr2_1:648233-648252 | Msa0186010:CDS | 35.0% | |
| TTTACCTGAACGGTTGTAAT+CGG | - | chr2_1:648275-648294 | None:intergenic | 35.0% | |
| AGTAGCAAATCTTTCCATTG+AGG | + | chr2_1:648542-648561 | Msa0186010:intron | 35.0% | |
| TCCTTCGAATTTAAATGCCT+TGG | + | chr2_1:648624-648643 | Msa0186010:intron | 35.0% | |
| CCTTCGAATTTAAATGCCTT+GGG | + | chr2_1:648625-648644 | Msa0186010:intron | 35.0% | |
| GTGTATCAACCCTATTACAT+TGG | + | chr2_1:648898-648917 | Msa0186010:intron | 35.0% | |
| TGTTAGGGTCCAATGTAATA+GGG | - | chr2_1:648910-648929 | None:intergenic | 35.0% | |
| ATGTTAGGGTCCAATGTAAT+AGG | - | chr2_1:648911-648930 | None:intergenic | 35.0% | |
| CCTAGTTTATAGGGATGTTA+GGG | - | chr2_1:648925-648944 | None:intergenic | 35.0% | |
| TCCTAGTTTATAGGGATGTT+AGG | - | chr2_1:648926-648945 | None:intergenic | 35.0% | |
| ATTATTGAATGATGAGCAGC+AGG | - | chr2_1:649063-649082 | None:intergenic | 35.0% | |
| TTTATCATGGTCAAGCTTGT+GGG | - | chr2_1:649124-649143 | None:intergenic | 35.0% | |
| ATTTATCATGGTCAAGCTTG+TGG | - | chr2_1:649125-649144 | None:intergenic | 35.0% | |
| TTGATATAGGAAGAAGTCTG+AGG | + | chr2_1:649231-649250 | Msa0186010:intron | 35.0% | |
| TTTGTCCTTTCATGGAAAAC+TGG | + | chr2_1:649305-649324 | Msa0186010:intron | 35.0% | |
| TAGGTTCTTCACTCATATCT+TGG | - | chr2_1:649511-649530 | None:intergenic | 35.0% | |
| ! | ACTGGATTCTGCTTCTTTTT+AGG | - | chr2_1:649530-649549 | None:intergenic | 35.0% |
| AGATACCTTAAGAACAATCC+TGG | - | chr2_1:649647-649666 | None:intergenic | 35.0% | |
| GCTTTGTAATGTGTGATTGT+TGG | + | chr2_1:649683-649702 | Msa0186010:intron | 35.0% | |
| TAGCAAGACACATCTTCAAA+AGG | + | chr2_1:649797-649816 | Msa0186010:intron | 35.0% | |
| TTGGATTTACTCGATTCTTC+TGG | - | chr2_1:649893-649912 | None:intergenic | 35.0% | |
| CTCTCAAAGGAAATATTGCT+TGG | - | chr2_1:649912-649931 | None:intergenic | 35.0% | |
| GGGATCCTCAAATATTTCTT+AGG | - | chr2_1:649971-649990 | None:intergenic | 35.0% | |
| GAATAAGGAGTAATCAGATG+TGG | + | chr2_1:650123-650142 | Msa0186010:intron | 35.0% | |
| TGAAACAAGCAAGCAGAAAA+TGG | - | chr2_1:650195-650214 | None:intergenic | 35.0% | |
| ATTCATGAGTATACCAGAAG+GGG | - | chr2_1:650269-650288 | None:intergenic | 35.0% | |
| GTATTCATGAGTATACCAGA+AGG | - | chr2_1:650271-650290 | None:intergenic | 35.0% | |
| CTATTGCCTCTATTCAAAAC+TGG | - | chr2_1:650351-650370 | None:intergenic | 35.0% | |
| AATAGAGGCAATAGCAAGAA+GGG | + | chr2_1:650357-650376 | Msa0186010:intron | 35.0% | |
| !! | AAGGGTTACAATCAAGTTGA+GGG | - | chr2_1:650436-650455 | None:intergenic | 35.0% |
| ! | TAAGGGTTACAATCAAGTTG+AGG | - | chr2_1:650437-650456 | None:intergenic | 35.0% |
| TATACCCATTTACTGCCAAT+TGG | + | chr2_1:650514-650533 | Msa0186010:intron | 35.0% | |
| !! | TTAAAGGCATTGACTGCTAA+TGG | - | chr2_1:650577-650596 | None:intergenic | 35.0% |
| ! | TCAGTCTGAACATTGGTTAA+AGG | - | chr2_1:650614-650633 | None:intergenic | 35.0% |
| ! | CATGCCTCTTTATAGGTTTT+AGG | + | chr2_1:650634-650653 | Msa0186010:intron | 35.0% |
| TGAGCCTAAAACCTATAAAG+AGG | - | chr2_1:650641-650660 | None:intergenic | 35.0% | |
| TCATCAAAATCAGTCAACTC+AGG | - | chr2_1:650751-650770 | None:intergenic | 35.0% | |
| TGTAATCTTTCAAATAGCCC+GGG | + | chr2_1:650794-650813 | Msa0186010:intron | 35.0% | |
| TTTATGTATAACAGGTGGTG+AGG | + | chr2_1:650837-650856 | Msa0186010:intron | 35.0% | |
| TTATGTATAACAGGTGGTGA+GGG | + | chr2_1:650838-650857 | Msa0186010:intron | 35.0% | |
| TATTCCCATGAGACATTTGA+AGG | + | chr2_1:651003-651022 | Msa0186010:intron | 35.0% | |
| ! | TTGATTGTTTAAAATGGGGC+TGG | + | chr2_1:651272-651291 | Msa0186010:intron | 35.0% |
| ! | TGATTGTTTAAAATGGGGCT+GGG | + | chr2_1:651273-651292 | Msa0186010:intron | 35.0% |
| TGCAGTCTTCATCATGAATA+GGG | - | chr2_1:651301-651320 | None:intergenic | 35.0% | |
| ATGCAGTCTTCATCATGAAT+AGG | - | chr2_1:651302-651321 | None:intergenic | 35.0% | |
| ! | CCCACTTACCTAAAACTTTT+TGG | - | chr2_1:651341-651360 | None:intergenic | 35.0% |
| !! | CCTCAGTTTTATGCTTCTAA+AGG | - | chr2_1:651468-651487 | None:intergenic | 35.0% |
| ! | CCTTTAGAAGCATAAAACTG+AGG | + | chr2_1:651465-651484 | Msa0186010:intron | 35.0% |
| AACTGAGGCATATTGAATTC+AGG | + | chr2_1:651480-651499 | Msa0186010:intron | 35.0% | |
| ACTGAGGCATATTGAATTCA+GGG | + | chr2_1:651481-651500 | Msa0186010:intron | 35.0% | |
| AAAAGGAAACTGAGACTGTA+AGG | + | chr2_1:651815-651834 | Msa0186010:intron | 35.0% | |
| ! | ACCTAGTCTAAAATGCCAAA+GGG | + | chr2_1:651863-651882 | Msa0186010:intron | 35.0% |
| !! | GATTGGTTCTGGTGATAAAA+GGG | - | chr2_1:651976-651995 | None:intergenic | 35.0% |
| !! | TGATTGGTTCTGGTGATAAA+AGG | - | chr2_1:651977-651996 | None:intergenic | 35.0% |
| TCTTGTCCTGAATAAAACAC+TGG | + | chr2_1:652009-652028 | Msa0186010:intron | 35.0% | |
| !! | TGGTTTCCAGTGTTTTATTC+AGG | - | chr2_1:652018-652037 | None:intergenic | 35.0% |
| GCCATAGTTAAATGACCATT+AGG | + | chr2_1:652170-652189 | Msa0186010:intron | 35.0% | |
| !! | AGTTCTTGGATCATTGATTC+AGG | - | chr2_1:652272-652291 | None:intergenic | 35.0% |
| CAGAATTCATCTCTTAACCA+AGG | - | chr2_1:652413-652432 | None:intergenic | 35.0% | |
| TATTGCTCATGTGTAATAGC+TGG | + | chr2_1:652455-652474 | Msa0186010:intron | 35.0% | |
| TGCTAATCATATTGCAAAGG+AGG | - | chr2_1:652534-652553 | None:intergenic | 35.0% | |
| ! | ACGTACACCATGTTTAGAAT+TGG | + | chr2_1:652652-652671 | Msa0186010:intron | 35.0% |
| CAAGGAACCAATTCTAAACA+TGG | - | chr2_1:652662-652681 | None:intergenic | 35.0% | |
| !! | CTCTGAGTTGAAGATTTTGT+GGG | - | chr2_1:653002-653021 | None:intergenic | 35.0% |
| !! | ACTCTGAGTTGAAGATTTTG+TGG | - | chr2_1:653003-653022 | None:intergenic | 35.0% |
| TGGAAAATGCATGTGATGTT+TGG | - | chr2_1:653132-653151 | None:intergenic | 35.0% | |
| GGATCAAAATCATCAGTGAT+AGG | + | chr2_1:653244-653263 | Msa0186010:intron | 35.0% | |
| GAAGAAAGGACTAGATTGAT+CGG | + | chr2_1:653405-653424 | Msa0186010:intron | 35.0% | |
| ATGTTCTTGGTTACTCAACA+TGG | - | chr2_1:648758-648777 | None:intergenic | 35.0% | |
| GTGTATCAACCCTATTACAT+TGG | + | chr2_1:648898-648917 | Msa0186010:intron | 35.0% | |
| TGTTAGGGTCCAATGTAATA+GGG | - | chr2_1:648910-648929 | None:intergenic | 35.0% | |
| ATGTTAGGGTCCAATGTAAT+AGG | - | chr2_1:648911-648930 | None:intergenic | 35.0% | |
| CCTAGTTTATAGGGATGTTA+GGG | - | chr2_1:648925-648944 | None:intergenic | 35.0% | |
| TCCTAGTTTATAGGGATGTT+AGG | - | chr2_1:648926-648945 | None:intergenic | 35.0% | |
| ATTATTGAATGATGAGCAGC+AGG | - | chr2_1:649063-649082 | None:intergenic | 35.0% | |
| !! | AATCCTACTTTAGAGTCACT+TGG | - | chr2_1:653903-653922 | None:intergenic | 35.0% |
| ! | ACTTGCTGACAAAGTTATAG+GGG | - | chr2_1:654189-654208 | None:intergenic | 35.0% |
| ! | TTTTGGTACCCCTGAAAATA+TGG | + | chr2_1:654278-654297 | Msa0186010:intron | 35.0% |
| AAGTGTATCTCATTTAGCTG+TGG | - | chr2_1:654341-654360 | None:intergenic | 35.0% | |
| TTTAGGCTCACACACATAAA+AGG | + | chr2_1:654389-654408 | Msa0186010:intron | 35.0% | |
| TTAGGCTCACACACATAAAA+GGG | + | chr2_1:654390-654409 | Msa0186010:intron | 35.0% | |
| ! | GGGAAAAGTATGAAATAGCA+AGG | + | chr2_1:654410-654429 | Msa0186010:intron | 35.0% |
| ! | CGTAACAACGTATTTTCTAG+AGG | + | chr2_1:654626-654645 | Msa0186010:intron | 35.0% |
| !! | ACAACGTATTTTCTAGAGGA+AGG | + | chr2_1:654630-654649 | Msa0186010:intron | 35.0% |
| ACTTACATGCTCTTTGTGAA+AGG | + | chr2_1:654659-654678 | Msa0186010:intron | 35.0% | |
| CTTACATGCTCTTTGTGAAA+GGG | + | chr2_1:654660-654679 | Msa0186010:intron | 35.0% | |
| GGGTAAAACTTCAGTTCTAT+TGG | + | chr2_1:654680-654699 | Msa0186010:intron | 35.0% | |
| CTGTCTCGTAAACAGAAAAT+AGG | - | chr2_1:654769-654788 | None:intergenic | 35.0% | |
| CTACACAGTATCTGAAAGAA+AGG | - | chr2_1:654817-654836 | None:intergenic | 35.0% | |
| TCAGCCACACACTAATATAT+AGG | + | chr2_1:655281-655300 | Msa0186010:intron | 35.0% | |
| GTTGCCTATATATTAGTGTG+TGG | - | chr2_1:655288-655307 | None:intergenic | 35.0% | |
| CACACTAATATATAGGCAAC+GGG | + | chr2_1:655288-655307 | Msa0186010:intron | 35.0% | |
| ACACTAATATATAGGCAACG+GGG | + | chr2_1:655289-655308 | Msa0186010:intron | 35.0% | |
| !!! | TTTTGTGAAAATTCGGGTTG+GGG | - | chr2_1:655345-655364 | None:intergenic | 35.0% |
| AAGAAATTGAATGTGGGTCT+CGG | - | chr2_1:655470-655489 | None:intergenic | 35.0% | |
| AGACCCACATTCAATTTCTT+TGG | + | chr2_1:655470-655489 | Msa0186010:intron | 35.0% | |
| ! | GTTTAGTTTAGTTGGGTTTC+GGG | + | chr2_1:655502-655521 | Msa0186010:intron | 35.0% |
| ! | TTTAGTTTAGTTGGGTTTCG+GGG | + | chr2_1:655503-655522 | Msa0186010:intron | 35.0% |
| ! | GAAGGTTGACTTAATTGACA+AGG | - | chr2_1:655659-655678 | None:intergenic | 35.0% |
| TGACTCATTCTTACATGAAC+GGG | - | chr2_1:655755-655774 | None:intergenic | 35.0% | |
| ! | ATAGTGGAGTTTCCCTTAAA+CGG | + | chr2_1:655807-655826 | Msa0186010:intron | 35.0% |
| ! | CCATGTATTTGAGATTGGAT+TGG | - | chr2_1:655981-656000 | None:intergenic | 35.0% |
| CCAATCCAATCTCAAATACA+TGG | + | chr2_1:655978-655997 | Msa0186010:intron | 35.0% | |
| !! | CCTAAGAGTACTTATGGAAT+GGG | - | chr2_1:656095-656114 | None:intergenic | 35.0% |
| CCATTCCATAAGTACTCTTA+GGG | + | chr2_1:656093-656112 | Msa0186010:intron | 35.0% | |
| AGTACTATGTATGAGATCCT+GGG | + | chr2_1:656230-656249 | Msa0186010:intron | 35.0% | |
| GATGCATACACATAACACTA+GGG | - | chr2_1:656311-656330 | None:intergenic | 35.0% | |
| TGATGCATACACATAACACT+AGG | - | chr2_1:656312-656331 | None:intergenic | 35.0% | |
| GTCAGTTGAGTTAAGACTTA+TGG | - | chr2_1:656371-656390 | None:intergenic | 35.0% | |
| GAAGAAACAACATTAGCCAT+TGG | - | chr2_1:656417-656436 | None:intergenic | 35.0% | |
| !! | GAAGTATTGGTATCTGATAC+GGG | - | chr2_1:656478-656497 | None:intergenic | 35.0% |
| GAAAAGAGTAATTCACTGCT+AGG | - | chr2_1:657020-657039 | None:intergenic | 35.0% | |
| ! | TTTTCTTCCTTTCCATGACA+AGG | + | chr2_1:657035-657054 | Msa0186010:intron | 35.0% |
| TCCCTACTCAAGTAATGAAA+TGG | + | chr2_1:657116-657135 | Msa0186010:intron | 35.0% | |
| CCCATTTCATTACTTGAGTA+GGG | - | chr2_1:657120-657139 | None:intergenic | 35.0% | |
| CCCTACTCAAGTAATGAAAT+GGG | + | chr2_1:657117-657136 | Msa0186010:intron | 35.0% | |
| TCCCATTTCATTACTTGAGT+AGG | - | chr2_1:657121-657140 | None:intergenic | 35.0% | |
| ATAATAAAATGTTGGAGGGG+GGG | + | chr2_1:657330-657349 | Msa0186010:intron | 35.0% | |
| TCGTGATCTAACCCAAAAAA+AGG | - | chr2_1:657645-657664 | None:intergenic | 35.0% | |
| !!! | TTTTTTTGGGTTAGATCACG+AGG | + | chr2_1:657644-657663 | Msa0186010:intron | 35.0% |
| TCTTTAAGCTCTTTATCACC+TGG | - | chr2_1:657756-657775 | None:intergenic | 35.0% | |
| TTACCTTAGCAACTTAAGAC+AGG | + | chr2_1:657800-657819 | Msa0186010:CDS | 35.0% | |
| ! | ATTCCTGTCTTAAGTTGCTA+AGG | - | chr2_1:657806-657825 | None:intergenic | 35.0% |
| GACAGGAATTTCTCAAGAAA+AGG | + | chr2_1:657817-657836 | Msa0186010:CDS | 35.0% | |
| GAAAAAGGGTAAACTACCAA+AGG | + | chr2_1:657839-657858 | Msa0186010:CDS | 35.0% | |
| ! | AATGCTTTTCTTGCATCCTT+TGG | - | chr2_1:657858-657877 | None:intergenic | 35.0% |
| !! | CAAGAAAAGCATTGATGGAT+TGG | + | chr2_1:657865-657884 | Msa0186010:CDS | 35.0% |
| ATTTGTATTACCGTGGGATA+AGG | - | chr2_1:657912-657931 | None:intergenic | 35.0% | |
| AATTTCCTCGAATCATTCGT+TGG | - | chr2_1:658036-658055 | None:intergenic | 35.0% | |
| ! | ATTTGAGTTCAAATCCTGAC+TGG | + | chr2_1:658053-658072 | Msa0186010:intron | 35.0% |
| GACCAAAAATTATTCCAGTC+AGG | - | chr2_1:658070-658089 | None:intergenic | 35.0% | |
| TTTAACTCTCAACTGAACTC+CGG | + | chr2_1:658098-658117 | Msa0186010:intron | 35.0% | |
| TCCTTCATTTGGAAACAGAA+GGG | + | chr2_1:658133-658152 | Msa0186010:intron | 35.0% | |
| ! | TAACACCAACAAAATGGACT+AGG | - | chr2_1:658236-658255 | None:intergenic | 35.0% |
| ACACTGTAACACCAACAAAA+TGG | - | chr2_1:658242-658261 | None:intergenic | 35.0% | |
| ! | GTACTAGAAAACTTTTGGCA+TGG | + | chr2_1:658268-658287 | Msa0186010:intron | 35.0% |
| CAAATGCAAGTTAAGCTTGT+TGG | - | chr2_1:658313-658332 | None:intergenic | 35.0% | |
| !! | GCTTAACTTGCATTTGCAAA+AGG | + | chr2_1:658317-658336 | Msa0186010:intron | 35.0% |
| TGGAATTGACGTTGTTATCT+TGG | - | chr2_1:658355-658374 | None:intergenic | 35.0% | |
| AGCAAAGAAGCTTGACAAAA+TGG | - | chr2_1:658375-658394 | None:intergenic | 35.0% | |
| !!! | TTGATGAATTTTTCAGGAGG+AGG | + | chr2_1:658441-658460 | Msa0186010:intron | 35.0% |
| CCTGCAGAATAAATTTACAG+AGG | - | chr2_1:658613-658632 | None:intergenic | 35.0% | |
| CCTCTGTAAATTTATTCTGC+AGG | + | chr2_1:658610-658629 | Msa0186010:exon | 35.0% | |
| CTGTAAATTTATTCTGCAGG+TGG | + | chr2_1:658613-658632 | Msa0186010:exon | 35.0% | |
| TCCATGACATTCAAGCAAAA+GGG | - | chr2_1:658682-658701 | None:intergenic | 35.0% | |
| ATCCATGACATTCAAGCAAA+AGG | - | chr2_1:658683-658702 | None:intergenic | 35.0% | |
| ! | CCGGTTCGAAAAATTAACAT+AGG | - | chr2_1:658765-658784 | None:intergenic | 35.0% |
| !! | ATGATGATTAGCCTTGGATT+TGG | + | chr2_1:658988-659007 | Msa0186010:three_prime_UTR | 35.0% |
| !! | AATAAGGTCTGGTCTTTTCC+AGG | + | chr2_1:646921-646940 | Msa0186010:five_prime_UTR | 40.0% |
| AAAGGAAAGAGTGGAAAGCT+GGG | - | chr2_1:646959-646978 | None:intergenic | 40.0% | |
| CTGGTAAGCAGTCAAACAAA+AGG | - | chr2_1:647284-647303 | None:intergenic | 40.0% | |
| ATTGGTTGTGTTCCATGTGA+AGG | - | chr2_1:647532-647551 | None:intergenic | 40.0% | |
| TCACATGGAACACAACCAAT+CGG | + | chr2_1:647532-647551 | Msa0186010:exon | 40.0% | |
| CCAACCTTATTAGATCCGAT+TGG | - | chr2_1:647550-647569 | None:intergenic | 40.0% | |
| CCAATCGGATCTAATAAGGT+TGG | + | chr2_1:647547-647566 | Msa0186010:CDS | 40.0% | |
| AGAAGAGAAGCAAGTTCTGT+TGG | - | chr2_1:647880-647899 | None:intergenic | 40.0% | |
| !!! | CACGGAAAGCATTATTTTGG+TGG | - | chr2_1:647924-647943 | None:intergenic | 40.0% |
| GAAAAAGTCCTGAACATGAG+TGG | + | chr2_1:648406-648425 | Msa0186010:intron | 40.0% | |
| GTTCTTTAACTGCTAGTAGC+AGG | + | chr2_1:648504-648523 | Msa0186010:intron | 40.0% | |
| TGCTAACTTAAGAGGACAGA+TGG | - | chr2_1:648580-648599 | None:intergenic | 40.0% | |
| ACTAGCAGTGCTAACTTAAG+AGG | - | chr2_1:648588-648607 | None:intergenic | 40.0% | |
| TGCTAGTAATGAGATCAAGC+TGG | + | chr2_1:648601-648620 | Msa0186010:intron | 40.0% | |
| ! | CCCAAGGCATTTAAATTCGA+AGG | - | chr2_1:648628-648647 | None:intergenic | 40.0% |
| CCCTAACATCCCTATAAACT+AGG | + | chr2_1:648922-648941 | Msa0186010:intron | 40.0% | |
| ACTTGCAGTGCAAGTAACTA+AGG | + | chr2_1:648993-649012 | Msa0186010:intron | 40.0% | |
| !! | TTGAACTTTGGAGGTGCTAA+AGG | + | chr2_1:649176-649195 | Msa0186010:intron | 40.0% |
| ! | CCATGAAAGGACAAAGCATT+TGG | - | chr2_1:649300-649319 | None:intergenic | 40.0% |
| CCAAATGCTTTGTCCTTTCA+TGG | + | chr2_1:649297-649316 | Msa0186010:intron | 40.0% | |
| ! | CCAATCCAGTTTTCCATGAA+AGG | - | chr2_1:649313-649332 | None:intergenic | 40.0% |
| CCTTTCATGGAAAACTGGAT+TGG | + | chr2_1:649310-649329 | Msa0186010:intron | 40.0% | |
| TGACTGTCACAATACATGAC+TGG | + | chr2_1:649353-649372 | Msa0186010:intron | 40.0% | |
| TTCAGAGGAAGATCTGGAAA+TGG | + | chr2_1:649466-649485 | Msa0186010:intron | 40.0% | |
| GAATCCAGTTGTTGATCTTC+TGG | + | chr2_1:649541-649560 | Msa0186010:intron | 40.0% | |
| GATTCCAGAAGATCAACAAC+TGG | - | chr2_1:649548-649567 | None:intergenic | 40.0% | |
| AGTTCAGAGAAGCAACTACT+GGG | - | chr2_1:649602-649621 | None:intergenic | 40.0% | |
| AAGTTCAGAGAAGCAACTAC+TGG | - | chr2_1:649603-649622 | None:intergenic | 40.0% | |
| AGTTGCTTCTCTGAACTTCT+AGG | + | chr2_1:649605-649624 | Msa0186010:intron | 40.0% | |
| GTTGCTTCTCTGAACTTCTA+GGG | + | chr2_1:649606-649625 | Msa0186010:intron | 40.0% | |
| CTTAAGAACAATCCTGGTCT+TGG | - | chr2_1:649641-649660 | None:intergenic | 40.0% | |
| CAAGACCAGGATTGTTCTTA+AGG | + | chr2_1:649639-649658 | Msa0186010:intron | 40.0% | |
| TTGTTGGGGAATTCAGAAAC+TGG | + | chr2_1:649699-649718 | Msa0186010:intron | 40.0% | |
| TGTGTAGCTAAAGAGATGTC+AGG | + | chr2_1:649731-649750 | Msa0186010:intron | 40.0% | |
| TTGAAGATGTGTCTTGCTAC+AGG | - | chr2_1:649796-649815 | None:intergenic | 40.0% | |
| !! | GTATCTAAAGGTGTTGATGC+AGG | + | chr2_1:649851-649870 | Msa0186010:intron | 40.0% |
| !! | CTCGATTCTTCTGGTCTTTT+AGG | - | chr2_1:649884-649903 | None:intergenic | 40.0% |
| !! | GTTGATGACATCATATTGGC+TGG | - | chr2_1:650061-650080 | None:intergenic | 40.0% |
| ! | ACTGCTTTGTTGCTTCATGA+AGG | - | chr2_1:650160-650179 | None:intergenic | 40.0% |
| ! | TCTTCATGGTGATTTGCAAG+AGG | - | chr2_1:650296-650315 | None:intergenic | 40.0% |
| GAATAGAGGCAATAGCAAGA+AGG | + | chr2_1:650356-650375 | Msa0186010:intron | 40.0% | |
| ! | AAAGCCAGATTGGTAGCTAA+GGG | - | chr2_1:650454-650473 | None:intergenic | 40.0% |
| ! | TGAAAGGTACAAAGCCAGAT+TGG | - | chr2_1:650464-650483 | None:intergenic | 40.0% |
| AGAGTGAAACATAAGGCAGA+TGG | - | chr2_1:650493-650512 | None:intergenic | 40.0% | |
| GAAGCCAATTGGCAGTAAAT+GGG | - | chr2_1:650521-650540 | None:intergenic | 40.0% | |
| TGAAGCCAATTGGCAGTAAA+TGG | - | chr2_1:650522-650541 | None:intergenic | 40.0% | |
| ATTGGGTGGTAAATCCACAA+TGG | + | chr2_1:650543-650562 | Msa0186010:intron | 40.0% | |
| AGACTGACATGCCTCTTTAT+AGG | + | chr2_1:650627-650646 | Msa0186010:intron | 40.0% | |
| GTAATCTTTCAAATAGCCCG+GGG | + | chr2_1:650795-650814 | Msa0186010:intron | 40.0% | |
| ! | AGTGGAAGATGATGGTTCAT+TGG | + | chr2_1:650882-650901 | Msa0186010:intron | 40.0% |
| GAAGGAGGAGTTTCAATAAC+AGG | + | chr2_1:650946-650965 | Msa0186010:intron | 40.0% | |
| AGCTTATGCATCAACTCTTC+AGG | - | chr2_1:651187-651206 | None:intergenic | 40.0% | |
| ! | TTTCCACCCTTGCATTTTGT+TGG | + | chr2_1:651409-651428 | Msa0186010:intron | 40.0% |
| ! | TTCCACCCTTGCATTTTGTT+GGG | + | chr2_1:651410-651429 | Msa0186010:intron | 40.0% |
| AACACCCCAACAAAATGCAA+GGG | - | chr2_1:651418-651437 | None:intergenic | 40.0% | |
| AAACACCCCAACAAAATGCA+AGG | - | chr2_1:651419-651438 | None:intergenic | 40.0% | |
| !! | TGTGTCACTTTGCTAAACAC+AGG | - | chr2_1:651764-651783 | None:intergenic | 40.0% |
| ! | GACCTAGTCTAAAATGCCAA+AGG | + | chr2_1:651862-651881 | Msa0186010:intron | 40.0% |
| TATCTGGTAAAGGAGCAAAG+TGG | + | chr2_1:651889-651908 | Msa0186010:intron | 40.0% | |
| ATCTGGTAAAGGAGCAAAGT+GGG | + | chr2_1:651890-651909 | Msa0186010:intron | 40.0% | |
| ACCAGAACCAATCATCTTCT+TGG | + | chr2_1:651983-652002 | Msa0186010:intron | 40.0% | |
| ! | ACCAAGAAGATGATTGGTTC+TGG | - | chr2_1:651987-652006 | None:intergenic | 40.0% |
| GTTTCTTCTTCCATGTCTCT+TGG | - | chr2_1:652362-652381 | None:intergenic | 40.0% | |
| AACTGCACATGCTTCTAATC+AGG | - | chr2_1:652384-652403 | None:intergenic | 40.0% | |
| ! | CATGTGCAGTTTTTGAACCT+TGG | + | chr2_1:652393-652412 | Msa0186010:intron | 40.0% |
| TTGCTATCACCACATGATGA+AGG | + | chr2_1:652488-652507 | Msa0186010:intron | 40.0% | |
| ! | CCTCACCTTCAAAAGACTTT+TGG | - | chr2_1:652566-652585 | None:intergenic | 40.0% |
| !! | CCAAAAGTCTTTTGAAGGTG+AGG | + | chr2_1:652563-652582 | Msa0186010:intron | 40.0% |
| !! | AAAGTCTTTTGAAGGTGAGG+TGG | + | chr2_1:652566-652585 | Msa0186010:intron | 40.0% |
| !! | GAAACTTGTTGGCAGAAACA+TGG | - | chr2_1:652596-652615 | None:intergenic | 40.0% |
| ATCACACTGTGGAAACTTGT+TGG | - | chr2_1:652607-652626 | None:intergenic | 40.0% | |
| TGGTAGAAAGAATCACACTG+TGG | - | chr2_1:652618-652637 | None:intergenic | 40.0% | |
| !! | GTACGTGTGTGTACTTTTTG+TGG | - | chr2_1:652638-652657 | None:intergenic | 40.0% |
| TCTGGCAAATCACAATCTCA+AGG | - | chr2_1:652680-652699 | None:intergenic | 40.0% | |
| AAGTACAAGGGAGATTCTTC+TGG | - | chr2_1:652698-652717 | None:intergenic | 40.0% | |
| AGAATCTCCCTTGTACTTTC+TGG | + | chr2_1:652700-652719 | Msa0186010:intron | 40.0% | |
| ! | GCTGATTCCAGAAAGTACAA+GGG | - | chr2_1:652710-652729 | None:intergenic | 40.0% |
| !! | TGCTGATTCCAGAAAGTACA+AGG | - | chr2_1:652711-652730 | None:intergenic | 40.0% |
| !! | TGAGTTGAAGATTTTGTGGG+AGG | - | chr2_1:652999-653018 | None:intergenic | 40.0% |
| GTAAAAGGCAGTTACAGACT+TGG | + | chr2_1:653021-653040 | Msa0186010:intron | 40.0% | |
| AAGTTGTTGCAACGATTCCA+AGG | + | chr2_1:653211-653230 | Msa0186010:intron | 40.0% | |
| CGGTTCAAACTATCATTCCT+GGG | - | chr2_1:653335-653354 | None:intergenic | 40.0% | |
| ACGGTTCAAACTATCATTCC+TGG | - | chr2_1:653336-653355 | None:intergenic | 40.0% | |
| TAGTTTGAACCGTCCAAAAC+TGG | + | chr2_1:653343-653362 | Msa0186010:intron | 40.0% | |
| !!! | ACTGTTTCTCCAGTTTTGGA+CGG | - | chr2_1:653355-653374 | None:intergenic | 40.0% |
| !! | TGTCACTGTTTCTCCAGTTT+TGG | - | chr2_1:653359-653378 | None:intergenic | 40.0% |
| TTCTTCGTTCATCCTAGTGA+TGG | - | chr2_1:653391-653410 | None:intergenic | 40.0% | |
| TCACTAGGATGAACGAAGAA+AGG | + | chr2_1:653391-653410 | Msa0186010:intron | 40.0% | |
| CCCTAACATCCCTATAAACT+AGG | + | chr2_1:648922-648941 | Msa0186010:intron | 40.0% | |
| ACTTGCAGTGCAAGTAACTA+AGG | + | chr2_1:648993-649012 | Msa0186010:intron | 40.0% | |
| !! | GAACCAAGTGACTCTAAAGT+AGG | + | chr2_1:653897-653916 | Msa0186010:intron | 40.0% |
| CTTGATCCAAAGTCTACACT+CGG | + | chr2_1:653923-653942 | Msa0186010:intron | 40.0% | |
| TAATTGCAGTGCCTCAATTG+TGG | - | chr2_1:654069-654088 | None:intergenic | 40.0% | |
| !! | ACGTATTTTCTAGAGGAAGG+AGG | + | chr2_1:654633-654652 | Msa0186010:intron | 40.0% |
| TATATTAGTGTGTGGCTGAG+TGG | - | chr2_1:655280-655299 | None:intergenic | 40.0% | |
| TAATATATAGGCAACGGGGT+GGG | + | chr2_1:655293-655312 | Msa0186010:intron | 40.0% | |
| !! | TTTGTGAAAATTCGGGTTGG+GGG | - | chr2_1:655344-655363 | None:intergenic | 40.0% |
| TTTCAAACCCGGCAAAGTTT+GGG | - | chr2_1:655382-655401 | None:intergenic | 40.0% | |
| ! | TTTTCAAACCCGGCAAAGTT+TGG | - | chr2_1:655383-655402 | None:intergenic | 40.0% |
| !! | TGCGTGCTTATTTTCAAACC+CGG | - | chr2_1:655393-655412 | None:intergenic | 40.0% |
| ! | CGGAATTTTCTTGATAGGAG+CGG | - | chr2_1:655450-655469 | None:intergenic | 40.0% |
| ! | GGTCTCGGAATTTTCTTGAT+AGG | - | chr2_1:655455-655474 | None:intergenic | 40.0% |
| CATTCTTACATGAACGGGTA+AGG | - | chr2_1:655750-655769 | None:intergenic | 40.0% | |
| ! | TTAACTTGGCCACATCATAG+TGG | + | chr2_1:655791-655810 | Msa0186010:intron | 40.0% |
| TAGTGGAGTTTCCCTTAAAC+GGG | + | chr2_1:655808-655827 | Msa0186010:intron | 40.0% | |
| ! | ATCATAGAAAGCGCATGTCT+TGG | - | chr2_1:655932-655951 | None:intergenic | 40.0% |
| CCCATTCCATAAGTACTCTT+AGG | + | chr2_1:656092-656111 | Msa0186010:intron | 40.0% | |
| !! | CCCTAAGAGTACTTATGGAA+TGG | - | chr2_1:656096-656115 | None:intergenic | 40.0% |
| TTCCATAAGTACTCTTAGGG+AGG | + | chr2_1:656096-656115 | Msa0186010:intron | 40.0% | |
| !! | ATCCTCCCTAAGAGTACTTA+TGG | - | chr2_1:656101-656120 | None:intergenic | 40.0% |
| AGACCATAAGCCACTGAAAT+TGG | + | chr2_1:656188-656207 | Msa0186010:intron | 40.0% | |
| GAGTACTATGTATGAGATCC+TGG | + | chr2_1:656229-656248 | Msa0186010:intron | 40.0% | |
| TTCTTCTATCCTATGAAGCC+CGG | + | chr2_1:656431-656450 | Msa0186010:intron | 40.0% | |
| CAATACTTCACGGATACTCT+CGG | + | chr2_1:656489-656508 | Msa0186010:intron | 40.0% | |
| !! | TGAAGTATCGGTATCCGATA+CGG | - | chr2_1:656523-656542 | None:intergenic | 40.0% |
| TATCGGATACCGATACTTCA+CGG | + | chr2_1:656523-656542 | Msa0186010:intron | 40.0% | |
| TATGATACGACACAGGTACA+CGG | - | chr2_1:656900-656919 | None:intergenic | 40.0% | |
| TAGATAGAAGCTATGAAGCC+CGG | - | chr2_1:656941-656960 | None:intergenic | 40.0% | |
| ! | GATATAATGCAGCCTTGTCA+TGG | - | chr2_1:657050-657069 | None:intergenic | 40.0% |
| ! | CATGCATGGTGAGAATGTTT+TGG | + | chr2_1:657164-657183 | Msa0186010:intron | 40.0% |
| CGTACATACCATGAAAGAGA+TGG | + | chr2_1:657247-657266 | Msa0186010:intron | 40.0% | |
| ! | AAGTATAGGGCTGACTCATT+CGG | + | chr2_1:657393-657412 | Msa0186010:intron | 40.0% |
| TCAGAGGATGAAATGAGTTG+TGG | + | chr2_1:657678-657697 | Msa0186010:CDS | 40.0% | |
| GGATGAAATGAGTTGTGGAA+AGG | + | chr2_1:657683-657702 | Msa0186010:CDS | 40.0% | |
| GAAATGCTCCTTCGTAAGTA+CGG | + | chr2_1:657774-657793 | Msa0186010:CDS | 40.0% | |
| AAATGCTCCTTCGTAAGTAC+GGG | + | chr2_1:657775-657794 | Msa0186010:CDS | 40.0% | |
| !! | GGATGCAAGAAAAGCATTGA+TGG | + | chr2_1:657860-657879 | Msa0186010:CDS | 40.0% |
| !! | GAAAAGCATTGATGGATTGG+TGG | + | chr2_1:657868-657887 | Msa0186010:CDS | 40.0% |
| TTTGTCCAACGAATGATTCG+AGG | + | chr2_1:658028-658047 | Msa0186010:intron | 40.0% | |
| TTTCCAAATGAAGGAGACTC+CGG | - | chr2_1:658128-658147 | None:intergenic | 40.0% | |
| CTCCTTCATTTGGAAACAGA+AGG | + | chr2_1:658132-658151 | Msa0186010:intron | 40.0% | |
| ACCCTTCTGTTTCCAAATGA+AGG | - | chr2_1:658137-658156 | None:intergenic | 40.0% | |
| ! | AGGTTCCTAGTCCATTTTGT+TGG | + | chr2_1:658228-658247 | Msa0186010:intron | 40.0% |
| ! | AGAAAACTTTTGGCATGGTG+AGG | + | chr2_1:658273-658292 | Msa0186010:intron | 40.0% |
| TCAATCAGAGGAAAAGACAC+TGG | + | chr2_1:658524-658543 | Msa0186010:CDS | 40.0% | |
| CTTCTTTCGCAGATTAAGAC+AGG | - | chr2_1:658655-658674 | None:intergenic | 40.0% | |
| ! | ACCCTTTTGCTTGAATGTCA+TGG | + | chr2_1:658678-658697 | Msa0186010:three_prime_UTR | 40.0% |
| !! | TCTGGATTGGACTTTTGAGA+TGG | - | chr2_1:658727-658746 | None:intergenic | 40.0% |
| ! | ATAGGCGTATTGTTCTGGAT+TGG | - | chr2_1:658740-658759 | None:intergenic | 40.0% |
| ! | TCCTTTTCCCCAGGTTTTCT+TGG | + | chr2_1:646884-646903 | Msa0186010:five_prime_UTR | 45.0% |
| TCCAAGAAAACCTGGGGAAA+AGG | - | chr2_1:646888-646907 | None:intergenic | 45.0% | |
| GAAAGGAAAGAGTGGAAAGC+TGG | - | chr2_1:646960-646979 | None:intergenic | 45.0% | |
| AGAAGTGGGAAAGGAAAGAG+TGG | - | chr2_1:646968-646987 | None:intergenic | 45.0% | |
| GTTTCTTCTCTAGCTAGCTG+AGG | + | chr2_1:646995-647014 | Msa0186010:intron | 45.0% | |
| ! | AGTGGGTCATATTGATGGCA+AGG | + | chr2_1:647443-647462 | Msa0186010:intron | 45.0% |
| CAGGATCATCTCCTATCTCA+CGG | - | chr2_1:647942-647961 | None:intergenic | 45.0% | |
| ! | TGTTGCTTCATTGAAGGGCT+TGG | - | chr2_1:648188-648207 | None:intergenic | 45.0% |
| TCATCCGATTACAACCGTTC+AGG | + | chr2_1:648268-648287 | Msa0186010:CDS | 45.0% | |
| ! | TAAGGTGTAGTGTTAGCCTG+TGG | + | chr2_1:649011-649030 | Msa0186010:intron | 45.0% |
| TCCTCAATTACTTGTGCCAC+AGG | - | chr2_1:649030-649049 | None:intergenic | 45.0% | |
| ! | GTGGCTGCTCTACCTTTTAA+AGG | - | chr2_1:649405-649424 | None:intergenic | 45.0% |
| TGTCAGGTCTAGTAGTGTTC+AGG | + | chr2_1:649747-649766 | Msa0186010:intron | 45.0% | |
| AAGATGTGTCTTGCTACAGG+AGG | - | chr2_1:649793-649812 | None:intergenic | 45.0% | |
| !! | TAAAGGTGTTGATGCAGGCT+TGG | + | chr2_1:649856-649875 | Msa0186010:intron | 45.0% |
| CAGGCATTTCAGTCTCTCAA+AGG | - | chr2_1:649925-649944 | None:intergenic | 45.0% | |
| !! | GAAGTTGCTCACTCTAAAGC+AGG | - | chr2_1:649944-649963 | None:intergenic | 45.0% |
| ACTGTAGTGAGCTTAGCAAC+AGG | + | chr2_1:650385-650404 | Msa0186010:intron | 45.0% | |
| !! | TTACAATCAAGTTGAGGGCC+TGG | - | chr2_1:650431-650450 | None:intergenic | 45.0% |
| GTAACCCTTAGCTACCAATC+TGG | + | chr2_1:650447-650466 | Msa0186010:intron | 45.0% | |
| ! | CAAAGCCAGATTGGTAGCTA+AGG | - | chr2_1:650455-650474 | None:intergenic | 45.0% |
| ! | AGGCAGATGGCTCTATTGAA+AGG | - | chr2_1:650480-650499 | None:intergenic | 45.0% |
| ! | ACTGCCAATTGGCTTCACAT+TGG | + | chr2_1:650525-650544 | Msa0186010:intron | 45.0% |
| ! | CTGCCAATTGGCTTCACATT+GGG | + | chr2_1:650526-650545 | Msa0186010:intron | 45.0% |
| TGGTAAATCCACAATGGACC+AGG | + | chr2_1:650549-650568 | Msa0186010:intron | 45.0% | |
| TAATGGTACCTGGTCCATTG+TGG | - | chr2_1:650560-650579 | None:intergenic | 45.0% | |
| ! | CATTGACTGCTAATGGTACC+TGG | - | chr2_1:650570-650589 | None:intergenic | 45.0% |
| AGGCATGTCAGTCTGAACAT+TGG | - | chr2_1:650621-650640 | None:intergenic | 45.0% | |
| TACAAGAGTCAAATCTGCCC+CGG | - | chr2_1:650815-650834 | None:intergenic | 45.0% | |
| ! | GGAAGATGATGGTTCATTGG+TGG | + | chr2_1:650885-650904 | Msa0186010:intron | 45.0% |
| TCTGACACAGTTTCAGAAGG+AGG | + | chr2_1:650931-650950 | Msa0186010:intron | 45.0% | |
| ! | TCCACCCTTGCATTTTGTTG+GGG | + | chr2_1:651411-651430 | Msa0186010:intron | 45.0% |
| ! | GCCCTTTGGCATTTTAGACT+AGG | - | chr2_1:651867-651886 | None:intergenic | 45.0% |
| !! | AAATGCCAAAGGGCACTATC+TGG | + | chr2_1:651873-651892 | Msa0186010:intron | 45.0% |
| CTTTACCAGATAGTGCCCTT+TGG | - | chr2_1:651881-651900 | None:intergenic | 45.0% | |
| !! | CAAAGGGCACTATCTGGTAA+AGG | + | chr2_1:651879-651898 | Msa0186010:intron | 45.0% |
| TCTGGTAAAGGAGCAAAGTG+GGG | + | chr2_1:651891-651910 | Msa0186010:intron | 45.0% | |
| !! | TGGTTCTGGTGATAAAAGGG+AGG | - | chr2_1:651973-651992 | None:intergenic | 45.0% |
| GGAGCTAGTGATCACATTTG+TGG | - | chr2_1:652251-652270 | None:intergenic | 45.0% | |
| TTGGTCATTCACCAACTGAC+AGG | - | chr2_1:652343-652362 | None:intergenic | 45.0% | |
| TGGTGAATGACCAAGAGACA+TGG | + | chr2_1:652349-652368 | Msa0186010:intron | 45.0% | |
| GATGAGAAGCCTTCATCATG+TGG | - | chr2_1:652500-652519 | None:intergenic | 45.0% | |
| CAAACTGTGTGTGCAGAGTA+CGG | - | chr2_1:652952-652971 | None:intergenic | 45.0% | |
| GCAACAACTTAGTGCATTCC+TGG | - | chr2_1:653201-653220 | None:intergenic | 45.0% | |
| TTGATCCTCTGTTTCGACCT+TGG | - | chr2_1:653231-653250 | None:intergenic | 45.0% | |
| !! | TCAATGCGAAGAGCTTTAGG+AGG | - | chr2_1:653307-653326 | None:intergenic | 45.0% |
| CGATCAATGCGAAGAGCTTT+AGG | - | chr2_1:653310-653329 | None:intergenic | 45.0% | |
| GGAGAAACAGTGACAGATGA+AGG | + | chr2_1:653364-653383 | Msa0186010:intron | 45.0% | |
| ACAGATGAAGGTCCATCACT+AGG | + | chr2_1:653376-653395 | Msa0186010:intron | 45.0% | |
| GTGAGAACATCGTTGTTACG+AGG | + | chr2_1:653427-653446 | Msa0186010:intron | 45.0% | |
| GCTTTCTCAAGCTCCATCAA+TGG | - | chr2_1:653455-653474 | None:intergenic | 45.0% | |
| ATGGAGCTTGAGAAAGCTTG+CGG | + | chr2_1:653458-653477 | Msa0186010:intron | 45.0% | |
| CTTGCGGAAGACGAATCAAA+AGG | + | chr2_1:653474-653493 | Msa0186010:intron | 45.0% | |
| ! | TAAGGTGTAGTGTTAGCCTG+TGG | + | chr2_1:649011-649030 | Msa0186010:intron | 45.0% |
| TCCTCAATTACTTGTGCCAC+AGG | - | chr2_1:649030-649049 | None:intergenic | 45.0% | |
| !! | TCCAGGGCACCATATTTTCA+GGG | - | chr2_1:654290-654309 | None:intergenic | 45.0% |
| TCGGTACACTTTGTACGAGA+TGG | + | chr2_1:654863-654882 | Msa0186010:intron | 45.0% | |
| AGTGGAATACGAGAGACACT+CGG | - | chr2_1:655262-655281 | None:intergenic | 45.0% | |
| CTAATATATAGGCAACGGGG+TGG | + | chr2_1:655292-655311 | Msa0186010:intron | 45.0% | |
| CATTTGTCCCCAAACTTTGC+CGG | + | chr2_1:655371-655390 | Msa0186010:intron | 45.0% | |
| ATTTGTCCCCAAACTTTGCC+GGG | + | chr2_1:655372-655391 | Msa0186010:intron | 45.0% | |
| TTCAAACCCGGCAAAGTTTG+GGG | - | chr2_1:655381-655400 | None:intergenic | 45.0% | |
| GTACATATCACCCACCAAAG+AGG | + | chr2_1:655581-655600 | Msa0186010:intron | 45.0% | |
| AGTCCTACCCACAACTTTGT+GGG | + | chr2_1:655623-655642 | Msa0186010:intron | 45.0% | |
| TGACTCACCCACAAAGTTGT+GGG | - | chr2_1:655633-655652 | None:intergenic | 45.0% | |
| TTGACTCACCCACAAAGTTG+TGG | - | chr2_1:655634-655653 | None:intergenic | 45.0% | |
| TTACATGAACGGGTAAGGTG+AGG | - | chr2_1:655745-655764 | None:intergenic | 45.0% | |
| AGGGAAACTCCACTATGATG+TGG | - | chr2_1:655803-655822 | None:intergenic | 45.0% | |
| AGTGGAGTTTCCCTTAAACG+GGG | + | chr2_1:655809-655828 | Msa0186010:intron | 45.0% | |
| GGACCAATTTCAGTGGCTTA+TGG | - | chr2_1:656194-656213 | None:intergenic | 45.0% | |
| AGCCACTGAAATTGGTCCAA+TGG | + | chr2_1:656196-656215 | Msa0186010:intron | 45.0% | |
| CACCATTGGACCAATTTCAG+TGG | - | chr2_1:656201-656220 | None:intergenic | 45.0% | |
| CTGAAATTGGTCCAATGGTG+AGG | + | chr2_1:656201-656220 | Msa0186010:intron | 45.0% | |
| GTACTCAAACTCCTCACCAT+TGG | - | chr2_1:656215-656234 | None:intergenic | 45.0% | |
| !! | CGAGAGTATCCGTGAAGTAT+TGG | - | chr2_1:656491-656510 | None:intergenic | 45.0% |
| !! | GAAGTATCGGTATCCGATAC+GGG | - | chr2_1:656522-656541 | None:intergenic | 45.0% |
| !! | CGAGAGTATCCGTGAAGTAT+CGG | - | chr2_1:656491-656510 | None:intergenic | 45.0% |
| CGATACTTCACGGATACTCT+CGG | + | chr2_1:656533-656552 | Msa0186010:intron | 45.0% | |
| ACCCGCACTCATATAGTATC+CGG | + | chr2_1:656919-656938 | Msa0186010:intron | 45.0% | |
| ! | AATGCAGCCTTGTCATGGAA+AGG | - | chr2_1:657045-657064 | None:intergenic | 45.0% |
| GATTGGGACCATCTCTTTCA+TGG | - | chr2_1:657258-657277 | None:intergenic | 45.0% | |
| GGAAAGGTTGAAGCAGTAGA+AGG | + | chr2_1:657699-657718 | Msa0186010:CDS | 45.0% | |
| AAGGTTGAAGCAGTAGAAGG+TGG | + | chr2_1:657702-657721 | Msa0186010:CDS | 45.0% | |
| GGTGGTCATGATGAACTTTG+TGG | + | chr2_1:657720-657739 | Msa0186010:CDS | 45.0% | |
| AATGCTCCTTCGTAAGTACG+GGG | + | chr2_1:657776-657795 | Msa0186010:CDS | 45.0% | |
| ATTGGTGGAACGTCCACTAT+AGG | + | chr2_1:657883-657902 | Msa0186010:CDS | 45.0% | |
| TCAACTGAACTCCGGATTAC+CGG | + | chr2_1:658106-658125 | Msa0186010:intron | 45.0% | |
| TTACCGGAGTCTCCTTCATT+TGG | + | chr2_1:658122-658141 | Msa0186010:intron | 45.0% | |
| ACAGACCTACTCAGTGACAT+AGG | - | chr2_1:658790-658809 | None:intergenic | 45.0% | |
| ! | AAGTTTCTTGCTAGAGGTGC+AGG | + | chr2_1:658958-658977 | Msa0186010:three_prime_UTR | 45.0% |
| !! | TATATTATTGTTTAAATTAT+TGG | + | chr2_1:647211-647230 | Msa0186010:intron | 5.0% |
| !!! | ATTTAAAAAATTTGTTAATT+TGG | + | chr2_1:652055-652074 | Msa0186010:intron | 5.0% |
| !!! | TTTTATTAAATATTTTATAG+TGG | - | chr2_1:654033-654052 | None:intergenic | 5.0% |
| AGGCACACACTCTCACAACA+AGG | - | chr2_1:646855-646874 | None:intergenic | 50.0% | |
| GGGGAAAAGGAAAGAGAGGA+AGG | - | chr2_1:646875-646894 | None:intergenic | 50.0% | |
| ! | TCCTCTCTTTCCTTTTCCCC+AGG | + | chr2_1:646875-646894 | Msa0186010:five_prime_UTR | 50.0% |
| ACCTGGGGAAAAGGAAAGAG+AGG | - | chr2_1:646879-646898 | None:intergenic | 50.0% | |
| GAAAGAGTGGAAAGCTGGGT+TGG | - | chr2_1:646955-646974 | None:intergenic | 50.0% | |
| TACAGCATCAAGACCCGTGT+AGG | - | chr2_1:647111-647130 | None:intergenic | 50.0% | |
| TCTGCTGCTGGATTGCATCT+AGG | + | chr2_1:647483-647502 | Msa0186010:five_prime_UTR | 50.0% | |
| AAAGAGGGTGAGTTGCGATC+TGG | - | chr2_1:647598-647617 | None:intergenic | 50.0% | |
| TCCTGACCTTGACCACTTCA+TGG | + | chr2_1:647957-647976 | Msa0186010:CDS | 50.0% | |
| ACCATGAAGTGGTCAAGGTC+AGG | - | chr2_1:647961-647980 | None:intergenic | 50.0% | |
| GAAAAGGGCCACTCATGTTC+AGG | - | chr2_1:648417-648436 | None:intergenic | 50.0% | |
| ACCATCTCATGATTCGCCCA+AGG | - | chr2_1:648644-648663 | None:intergenic | 50.0% | |
| AGCTGGCACTAGTTCAGAGT+TGG | - | chr2_1:648967-648986 | None:intergenic | 50.0% | |
| GCACTGCAAGTTACATGAGC+TGG | - | chr2_1:648984-649003 | None:intergenic | 50.0% | |
| GCCTGTGGCACAAGTAATTG+AGG | + | chr2_1:649026-649045 | Msa0186010:intron | 50.0% | |
| ATCATGGTCAAGCTTGTGGG+AGG | - | chr2_1:649121-649140 | None:intergenic | 50.0% | |
| CTGCTACATGTGAGCTTCAG+TGG | - | chr2_1:649424-649443 | None:intergenic | 50.0% | |
| CTGAAGCTCACATGTAGCAG+TGG | + | chr2_1:649424-649443 | Msa0186010:intron | 50.0% | |
| AGCTCTGTACTCAGCTTCAG+AGG | + | chr2_1:649451-649470 | Msa0186010:intron | 50.0% | |
| CTCAGCTTCAGAGGAAGATC+TGG | + | chr2_1:649460-649479 | Msa0186010:intron | 50.0% | |
| ATGTTGATGCAGACTGGGCA+GGG | - | chr2_1:649577-649596 | None:intergenic | 50.0% | |
| TATGTTGATGCAGACTGGGC+AGG | - | chr2_1:649578-649597 | None:intergenic | 50.0% | |
| GGGCTATGTTGATGCAGACT+GGG | - | chr2_1:649582-649601 | None:intergenic | 50.0% | |
| TGGGCTATGTTGATGCAGAC+TGG | - | chr2_1:649583-649602 | None:intergenic | 50.0% | |
| GGGAAGAAAAGACCAAGACC+AGG | + | chr2_1:649626-649645 | Msa0186010:intron | 50.0% | |
| TCTTGCTACAGGAGGCTCAT+TGG | - | chr2_1:649785-649804 | None:intergenic | 50.0% | |
| TGCAGTTTGCAGACTTTGCC+AGG | + | chr2_1:650232-650251 | Msa0186010:intron | 50.0% | |
| GCAGTTTGCAGACTTTGCCA+GGG | + | chr2_1:650233-650252 | Msa0186010:intron | 50.0% | |
| !! | GAAGGGGTTTCTAGTTTCCC+TGG | - | chr2_1:650253-650272 | None:intergenic | 50.0% |
| GGGAAACTAGAAACCCCTTC+TGG | + | chr2_1:650253-650272 | Msa0186010:intron | 50.0% | |
| CCACCCAATGTGAAGCCAAT+TGG | - | chr2_1:650532-650551 | None:intergenic | 50.0% | |
| ! | CCAATTGGCTTCACATTGGG+TGG | + | chr2_1:650529-650548 | Msa0186010:intron | 50.0% |
| ACAAGAGTCAAATCTGCCCC+GGG | - | chr2_1:650814-650833 | None:intergenic | 50.0% | |
| ATAACAGGTGGTGAGGGAAG+AGG | + | chr2_1:650844-650863 | Msa0186010:intron | 50.0% | |
| GGGATGGAAGTGGAAGATGA+TGG | + | chr2_1:650874-650893 | Msa0186010:intron | 50.0% | |
| GGGTCTGACACAGTTTCAGA+AGG | + | chr2_1:650928-650947 | Msa0186010:intron | 50.0% | |
| ACCCCAACAAAATGCAAGGG+TGG | - | chr2_1:651415-651434 | None:intergenic | 50.0% | |
| CTAGTACCTTGCCTGTCAGT+TGG | + | chr2_1:652329-652348 | Msa0186010:intron | 50.0% | |
| CATTCACCAACTGACAGGCA+AGG | - | chr2_1:652338-652357 | None:intergenic | 50.0% | |
| CGTACTCTGCACACACAGTT+TGG | + | chr2_1:652950-652969 | Msa0186010:intron | 50.0% | |
| CTGCACACACAGTTTGGTAC+AGG | + | chr2_1:652956-652975 | Msa0186010:intron | 50.0% | |
| CGATTCCAAGGTCGAAACAG+AGG | + | chr2_1:653223-653242 | Msa0186010:intron | 50.0% | |
| ! | TTGTTACGAGGCGCCATTGA+TGG | + | chr2_1:653439-653458 | Msa0186010:intron | 50.0% |
| AGCTGGCACTAGTTCAGAGT+TGG | - | chr2_1:648967-648986 | None:intergenic | 50.0% | |
| GCACTGCAAGTTACATGAGC+TGG | - | chr2_1:648984-649003 | None:intergenic | 50.0% | |
| GCCTGTGGCACAAGTAATTG+AGG | + | chr2_1:649026-649045 | Msa0186010:intron | 50.0% | |
| !! | CAAGTGCCGAGTGTAGACTT+TGG | - | chr2_1:653932-653951 | None:intergenic | 50.0% |
| !! | CCAGGGCACCATATTTTCAG+GGG | - | chr2_1:654289-654308 | None:intergenic | 50.0% |
| !! | GTCCAGGGCACCATATTTTC+AGG | - | chr2_1:654291-654310 | None:intergenic | 50.0% |
| TTAGCTGTGGTCCTGAGCAT+GGG | - | chr2_1:654328-654347 | None:intergenic | 50.0% | |
| TTTAGCTGTGGTCCTGAGCA+TGG | - | chr2_1:654329-654348 | None:intergenic | 50.0% | |
| TTCTTGATAGGAGCGGTACG+AGG | - | chr2_1:655443-655462 | None:intergenic | 50.0% | |
| AATGCGAGGACCTCTTTGGT+GGG | - | chr2_1:655594-655613 | None:intergenic | 50.0% | |
| TACCAATGCGAGGACCTCTT+TGG | - | chr2_1:655598-655617 | None:intergenic | 50.0% | |
| GAGTCCTACCCACAACTTTG+TGG | + | chr2_1:655622-655641 | Msa0186010:intron | 50.0% | |
| TCACCCACAAAGTTGTGGGT+AGG | - | chr2_1:655629-655648 | None:intergenic | 50.0% | |
| ACCAAATCCGCCCCGTTTAA+GGG | - | chr2_1:655822-655841 | None:intergenic | 50.0% | |
| ! | TTAAACGGGGCGGATTTGGT+CGG | + | chr2_1:655822-655841 | Msa0186010:intron | 50.0% |
| AATGGAGACGGTTTGAACCC+AGG | - | chr2_1:656250-656269 | None:intergenic | 50.0% | |
| ! | TTGGAGTATCCGGGCTTCAT+AGG | - | chr2_1:656443-656462 | None:intergenic | 50.0% |
| GAAGCCCGGATACTCCAAAA+CGG | + | chr2_1:656445-656464 | Msa0186010:intron | 50.0% | |
| !!! | GTGTCCGTTTTGGAGTATCC+GGG | - | chr2_1:656452-656471 | None:intergenic | 50.0% |
| !!! | CGTGTCCGTTTTGGAGTATC+CGG | - | chr2_1:656453-656472 | None:intergenic | 50.0% |
| ! | ATACGGGTACGTGTCCGTTT+TGG | - | chr2_1:656462-656481 | None:intergenic | 50.0% |
| TCTCGGATACGTACCCGTAT+CGG | + | chr2_1:656506-656525 | Msa0186010:intron | 50.0% | |
| CCCGGATACTATATGAGTGC+GGG | - | chr2_1:656923-656942 | None:intergenic | 50.0% | |
| CCCGCACTCATATAGTATCC+GGG | + | chr2_1:656920-656939 | Msa0186010:intron | 50.0% | |
| GCCCGGATACTATATGAGTG+CGG | - | chr2_1:656924-656943 | None:intergenic | 50.0% | |
| CTTTGTGGCACATCATGTCC+AGG | + | chr2_1:657735-657754 | Msa0186010:CDS | 50.0% | |
| ATGCTCCTTCGTAAGTACGG+GGG | + | chr2_1:657777-657796 | Msa0186010:CDS | 50.0% | |
| TGGGATAAGGCCACCTATAG+TGG | - | chr2_1:657899-657918 | None:intergenic | 50.0% | |
| !! | CTATAGGTGGCCTTATCCCA+CGG | + | chr2_1:657899-657918 | Msa0186010:CDS | 50.0% |
| TGAAGGAGACTCCGGTAATC+CGG | - | chr2_1:658120-658139 | None:intergenic | 50.0% | |
| CTGCAGCTGTCAGATATGAC+TGG | + | chr2_1:658469-658488 | Msa0186010:CDS | 50.0% | |
| GTAAGTAGCACCAGCATAGC+AGG | + | chr2_1:658586-658605 | Msa0186010:CDS | 50.0% | |
| TTACAGAGGTCCTGCTATGC+TGG | - | chr2_1:658599-658618 | None:intergenic | 50.0% | |
| AGGGCATAGGCGTATTGTTC+TGG | - | chr2_1:658745-658764 | None:intergenic | 50.0% | |
| CTACTCAGTGACATAGGTGC+CGG | - | chr2_1:658784-658803 | None:intergenic | 50.0% | |
| GCTGCTGGATTGCATCTAGG+AGG | + | chr2_1:647486-647505 | Msa0186010:five_prime_UTR | 55.0% | |
| GCCTTGGGCGAATCATGAGA+TGG | + | chr2_1:648640-648659 | Msa0186010:intron | 55.0% | |
| GTGAGGGAAGAGGAGGGTTA+GGG | + | chr2_1:650854-650873 | Msa0186010:intron | 55.0% | |
| AGGAGGGTTAGGGATGGAAG+TGG | + | chr2_1:650864-650883 | Msa0186010:intron | 55.0% | |
| ! | TCTTCGCATTGATCGAGCCC+AGG | + | chr2_1:653315-653334 | Msa0186010:intron | 55.0% |
| CCCCTGAAAATATGGTGCCC+TGG | + | chr2_1:654286-654305 | Msa0186010:intron | 55.0% | |
| ! | TATAGGCAACGGGGTGGGTT+AGG | + | chr2_1:655298-655317 | Msa0186010:intron | 55.0% |
| !! | ATAGGCAACGGGGTGGGTTA+GGG | + | chr2_1:655299-655318 | Msa0186010:intron | 55.0% |
| AGGAAACTCAGCCCCGATTG+GGG | - | chr2_1:655423-655442 | None:intergenic | 55.0% | |
| GAGGAAACTCAGCCCCGATT+GGG | - | chr2_1:655424-655443 | None:intergenic | 55.0% | |
| CAATGCGAGGACCTCTTTGG+TGG | - | chr2_1:655595-655614 | None:intergenic | 55.0% | |
| CACCAAAGAGGTCCTCGCAT+TGG | + | chr2_1:655593-655612 | Msa0186010:intron | 55.0% | |
| GGACTCATGCTACCAATGCG+AGG | - | chr2_1:655608-655627 | None:intergenic | 55.0% | |
| GGAGTTTCCCTTAAACGGGG+CGG | + | chr2_1:655812-655831 | Msa0186010:intron | 55.0% | |
| ! | TCCCTTAAACGGGGCGGATT+TGG | + | chr2_1:655818-655837 | Msa0186010:intron | 55.0% |
| GACCAAATCCGCCCCGTTTA+AGG | - | chr2_1:655823-655842 | None:intergenic | 55.0% | |
| ! | TAAACGGGGCGGATTTGGTC+GGG | + | chr2_1:655823-655842 | Msa0186010:intron | 55.0% |
| ! | GGATTTGGTCGGGTTTGGGT+AGG | + | chr2_1:655833-655852 | Msa0186010:intron | 55.0% |
| TTTGGTCGGGTTTGGGTAGG+TGG | + | chr2_1:655836-655855 | Msa0186010:intron | 55.0% | |
| TTGGTCGGGTTTGGGTAGGT+GGG | + | chr2_1:655837-655856 | Msa0186010:intron | 55.0% | |
| GTGCGGGTATGATACGACAC+AGG | - | chr2_1:656907-656926 | None:intergenic | 55.0% | |
| GGTTAGATCACGAGGCAGCA+GGG | + | chr2_1:657652-657671 | Msa0186010:intron | 55.0% | |
| GGTAACCCCCGTACTTACGA+AGG | - | chr2_1:657785-657804 | None:intergenic | 55.0% | |
| GGTGGAACGTCCACTATAGG+TGG | + | chr2_1:657886-657905 | Msa0186010:CDS | 55.0% | |
| CGGCACCTATGTCACTGAGT+AGG | + | chr2_1:658782-658801 | Msa0186010:three_prime_UTR | 55.0% | |
| AGGACAGATGGTCGTGACGC+GGG | - | chr2_1:648568-648587 | None:intergenic | 60.0% | |
| GAGGACAGATGGTCGTGACG+CGG | - | chr2_1:648569-648588 | None:intergenic | 60.0% | |
| ACAGGTGGTGAGGGAAGAGG+AGG | + | chr2_1:650847-650866 | Msa0186010:intron | 60.0% | |
| CAGGTGGTGAGGGAAGAGGA+GGG | + | chr2_1:650848-650867 | Msa0186010:intron | 60.0% | |
| GGTGAGGGAAGAGGAGGGTT+AGG | + | chr2_1:650853-650872 | Msa0186010:intron | 60.0% | |
| GGGAAGAGGAGGGTTAGGGA+TGG | + | chr2_1:650858-650877 | Msa0186010:intron | 60.0% | |
| !! | TAGGCAACGGGGTGGGTTAG+GGG | + | chr2_1:655300-655319 | Msa0186010:intron | 60.0% |
| CACGCATTTCCGCCCCCAAT+CGG | + | chr2_1:655407-655426 | Msa0186010:intron | 60.0% | |
| ACGCATTTCCGCCCCCAATC+GGG | + | chr2_1:655408-655427 | Msa0186010:intron | 60.0% | |
| GGAAACTCAGCCCCGATTGG+GGG | - | chr2_1:655422-655441 | None:intergenic | 60.0% | |
| CGAGGAAACTCAGCCCCGAT+TGG | - | chr2_1:655425-655444 | None:intergenic | 60.0% | |
| ! | GGGCGGATTTGGTCGGGTTT+GGG | + | chr2_1:655829-655848 | Msa0186010:intron | 60.0% |
| GGGTTAGATCACGAGGCAGC+AGG | + | chr2_1:657651-657670 | Msa0186010:intron | 60.0% | |
| !! | GCTGGGTTGGCTACAGCACC+TGG | - | chr2_1:646942-646961 | None:intergenic | 65.0% |
| TGCAGACTGGGCAGGGTGTG+TGG | - | chr2_1:649570-649589 | None:intergenic | 65.0% | |
| TGGTCCTGAGCATGGGCCGA+GGG | - | chr2_1:654321-654340 | None:intergenic | 65.0% | |
| CGCATTTCCGCCCCCAATCG+GGG | + | chr2_1:655409-655428 | Msa0186010:intron | 65.0% | |
| AACTCAGCCCCGATTGGGGG+CGG | - | chr2_1:655419-655438 | None:intergenic | 65.0% | |
| ! | GGGGCGGATTTGGTCGGGTT+TGG | + | chr2_1:655828-655847 | Msa0186010:intron | 65.0% |
| CGAGGCAGCAGGGACATCAG+AGG | + | chr2_1:657662-657681 | Msa0186010:CDS | 65.0% | |
| GGTCGTGACGCGGGCCTCAA+TGG | - | chr2_1:648559-648578 | None:intergenic | 70.0% | |
| GTCCTGAGCATGGGCCGAGG+GGG | - | chr2_1:654319-654338 | None:intergenic | 70.0% | |
| GGTCCTGAGCATGGGCCGAG+GGG | - | chr2_1:654320-654339 | None:intergenic | 70.0% | |
| GTGGTCCTGAGCATGGGCCG+AGG | - | chr2_1:654322-654341 | None:intergenic | 70.0% | |
| GCCCTGGACTGCCTCCCCCT+CGG | + | chr2_1:654302-654321 | Msa0186010:intron | 75.0% | |
| GCCGAGGGGGAGGCAGTCCA+GGG | - | chr2_1:654306-654325 | None:intergenic | 75.0% | |
| CTGAGCATGGGCCGAGGGGG+AGG | - | chr2_1:654316-654335 | None:intergenic | 75.0% | |
| CTCCCCCTCGGCCCATGCTC+AGG | + | chr2_1:654314-654333 | Msa0186010:intron | 75.0% | |
| ! | GGCCGAGGGGGAGGCAGTCC+AGG | - | chr2_1:654307-654326 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 646789 | 659011 | 646789 | ID=Msa0186010;Name=Msa0186010 |
| chr2_1 | mRNA | 646789 | 659011 | 646789 | ID=Msa0186010-mRNA-1;Parent=Msa0186010;Name=Msa0186010-mRNA-1;_AED=0.04;_eAED=0.04;_QI=293|1|1|1|0.8|0.66|6|393|267 |
| chr2_1 | exon | 646789 | 646990 | 646789 | ID=Msa0186010-mRNA-1:exon:98;Parent=Msa0186010-mRNA-1 |
| chr2_1 | exon | 647445 | 647655 | 647445 | ID=Msa0186010-mRNA-1:exon:99;Parent=Msa0186010-mRNA-1 |
| chr2_1 | exon | 647868 | 647978 | 647868 | ID=Msa0186010-mRNA-1:exon:100;Parent=Msa0186010-mRNA-1 |
| chr2_1 | exon | 648142 | 648289 | 648142 | ID=Msa0186010-mRNA-1:exon:101;Parent=Msa0186010-mRNA-1 |
| chr2_1 | exon | 657658 | 657920 | 657658 | ID=Msa0186010-mRNA-1:exon:102;Parent=Msa0186010-mRNA-1 |
| chr2_1 | exon | 658457 | 659011 | 658457 | ID=Msa0186010-mRNA-1:exon:103;Parent=Msa0186010-mRNA-1 |
| chr2_1 | five_prime_UTR | 646789 | 646990 | 646789 | ID=Msa0186010-mRNA-1:five_prime_utr;Parent=Msa0186010-mRNA-1 |
| chr2_1 | five_prime_UTR | 647445 | 647535 | 647445 | ID=Msa0186010-mRNA-1:five_prime_utr;Parent=Msa0186010-mRNA-1 |
| chr2_1 | CDS | 647536 | 647655 | 647536 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
| chr2_1 | CDS | 647868 | 647978 | 647868 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
| chr2_1 | CDS | 648142 | 648289 | 648142 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
| chr2_1 | CDS | 657658 | 657920 | 657658 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
| chr2_1 | CDS | 658457 | 658618 | 658457 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
| chr2_1 | three_prime_UTR | 658619 | 659011 | 658619 | ID=Msa0186010-mRNA-1:three_prime_utr;Parent=Msa0186010-mRNA-1 |
| Gene Sequence |
| Protein sequence |