Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186010 | AES61472.2 | 97.761 | 268 | 5 | 1 | 1 | 267 | 1 | 268 | 0.0 | 545 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186010 | sp|Q9FP29|KNOS1_ORYSJ | 58.268 | 254 | 99 | 3 | 12 | 262 | 38 | 287 | 2.94e-90 | 272 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186010 | G7I9I1 | 97.761 | 268 | 5 | 1 | 1 | 267 | 1 | 268 | 0.0 | 545 |
Gene ID | Type | Classification |
---|---|---|
Msa0186010 | TF | HB-KNOX |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000050 | Msa0186010 | 0.832321 | 1.010411e-55 | -8.615850e-47 |
Msa0001940 | Msa0186010 | 0.844288 | 8.293330e-59 | -8.615850e-47 |
Msa0002580 | Msa0186010 | 0.801698 | 7.963105e-49 | -8.615850e-47 |
Msa0005890 | Msa0186010 | 0.808439 | 3.095855e-50 | -8.615850e-47 |
Msa0017670 | Msa0186010 | 0.836833 | 7.422211e-57 | -8.615850e-47 |
Msa0017930 | Msa0186010 | 0.801003 | 1.104969e-48 | -8.615850e-47 |
Msa0017950 | Msa0186010 | 0.837067 | 6.466034e-57 | -8.615850e-47 |
Msa0024550 | Msa0186010 | 0.830164 | 3.425643e-55 | -8.615850e-47 |
Msa0027820 | Msa0186010 | 0.820935 | 5.274038e-53 | -8.615850e-47 |
Msa0035120 | Msa0186010 | 0.811453 | 6.946886e-51 | -8.615850e-47 |
Msa0042610 | Msa0186010 | 0.812366 | 4.396094e-51 | -8.615850e-47 |
Msa0080580 | Msa0186010 | 0.947903 | 2.711406e-106 | -8.615850e-47 |
Msa0092790 | Msa0186010 | 0.833609 | 4.834822e-56 | -8.615850e-47 |
Msa0097770 | Msa0186010 | 0.834724 | 2.539460e-56 | -8.615850e-47 |
Msa0098040 | Msa0186010 | 0.860330 | 2.226777e-63 | -8.615850e-47 |
Msa0117140 | Msa0186010 | 0.808648 | 2.792852e-50 | -8.615850e-47 |
Msa0120400 | Msa0186010 | 0.831726 | 1.417335e-55 | -8.615850e-47 |
Msa0124060 | Msa0186010 | 0.812013 | 5.249537e-51 | -8.615850e-47 |
Msa0131900 | Msa0186010 | 0.811580 | 6.519625e-51 | -8.615850e-47 |
Msa0164330 | Msa0186010 | 0.819097 | 1.388803e-52 | -8.615850e-47 |
Msa0167520 | Msa0186010 | 0.800723 | 1.260597e-48 | -8.615850e-47 |
Msa0168500 | Msa0186010 | 0.808092 | 3.670444e-50 | -8.615850e-47 |
Msa0175930 | Msa0186010 | 0.804013 | 2.647971e-49 | -8.615850e-47 |
Msa0186010 | Msa0197100 | 0.845925 | 2.996319e-59 | -8.615850e-47 |
Msa0186010 | Msa0214550 | 0.810992 | 8.749052e-51 | -8.615850e-47 |
Msa0186010 | Msa0221000 | 0.828368 | 9.346226e-55 | -8.615850e-47 |
Msa0186010 | Msa0224780 | 0.802196 | 6.291758e-49 | -8.615850e-47 |
Msa0186010 | Msa0225100 | 0.821097 | 4.838330e-53 | -8.615850e-47 |
Msa0186010 | Msa0225860 | 0.806543 | 7.816922e-50 | -8.615850e-47 |
Msa0186010 | Msa0239030 | 0.856405 | 3.290598e-62 | -8.615850e-47 |
Msa0186010 | Msa0240900 | 0.839584 | 1.451897e-57 | -8.615850e-47 |
Msa0186010 | Msa0244640 | 0.835145 | 1.989748e-56 | -8.615850e-47 |
Msa0186010 | Msa0265850 | 0.818564 | 1.835244e-52 | -8.615850e-47 |
Msa0186010 | Msa0266180 | 0.834961 | 2.213447e-56 | -8.615850e-47 |
Msa0186010 | Msa0276740 | 0.862872 | 3.724399e-64 | -8.615850e-47 |
Msa0186010 | Msa0283330 | 0.821937 | 3.096100e-53 | -8.615850e-47 |
Msa0186010 | Msa0287740 | 0.826501 | 2.620872e-54 | -8.615850e-47 |
Msa0186010 | Msa0298410 | 0.839530 | 1.499623e-57 | -8.615850e-47 |
Msa0186010 | Msa0300240 | 0.803567 | 3.277466e-49 | -8.615850e-47 |
Msa0186010 | Msa0300270 | 0.823528 | 1.319508e-53 | -8.615850e-47 |
Msa0186010 | Msa0300320 | 0.835327 | 1.789823e-56 | -8.615850e-47 |
Msa0186010 | Msa0307670 | 0.837742 | 4.344785e-57 | -8.615850e-47 |
Msa0186010 | Msa0316680 | 0.846896 | 1.628541e-59 | -8.615850e-47 |
Msa0186010 | Msa0317970 | 0.818313 | 2.091963e-52 | -8.615850e-47 |
Msa0186010 | Msa0321620 | 0.815021 | 1.144468e-51 | -8.615850e-47 |
Msa0186010 | Msa0337580 | 0.818335 | 2.068574e-52 | -8.615850e-47 |
Msa0186010 | Msa0337700 | 0.836819 | 7.483289e-57 | -8.615850e-47 |
Msa0186010 | Msa0339500 | 0.804649 | 1.951622e-49 | -8.615850e-47 |
Msa0186010 | Msa0360210 | 0.813775 | 2.158300e-51 | -8.615850e-47 |
Msa0186010 | Msa0378720 | 0.829899 | 3.975232e-55 | -8.615850e-47 |
Msa0186010 | Msa0406770 | 0.809507 | 1.828698e-50 | -8.615850e-47 |
Msa0186010 | Msa0428370 | 0.821787 | 3.352567e-53 | -8.615850e-47 |
Msa0186010 | Msa0428920 | 0.810900 | 9.159693e-51 | -8.615850e-47 |
Msa0186010 | Msa0450400 | -0.811313 | 7.451328e-51 | -8.615850e-47 |
Msa0186010 | Msa0474730 | 0.814582 | 1.431736e-51 | -8.615850e-47 |
Msa0186010 | Msa0483100 | 0.800120 | 1.672770e-48 | -8.615850e-47 |
Msa0186010 | Msa0519750 | 0.806979 | 6.323075e-50 | -8.615850e-47 |
Msa0186010 | Msa0519830 | 0.815119 | 1.088433e-51 | -8.615850e-47 |
Msa0186010 | Msa0526420 | 0.802599 | 5.196990e-49 | -8.615850e-47 |
Msa0186010 | Msa0530780 | 0.819297 | 1.250916e-52 | -8.615850e-47 |
Msa0186010 | Msa0572840 | 0.804517 | 2.080041e-49 | -8.615850e-47 |
Msa0186010 | Msa0580370 | 0.823647 | 1.237668e-53 | -8.615850e-47 |
Msa0186010 | Msa0581470 | 0.837623 | 4.659388e-57 | -8.615850e-47 |
Msa0186010 | Msa0583360 | -0.805228 | 1.477116e-49 | -8.615850e-47 |
Msa0186010 | Msa0597790 | 0.836771 | 7.695662e-57 | -8.615850e-47 |
Msa0186010 | Msa0614000 | 0.806909 | 6.541465e-50 | -8.615850e-47 |
Msa0186010 | Msa0624900 | 0.801904 | 7.224209e-49 | -8.615850e-47 |
Msa0186010 | Msa0637560 | 0.805842 | 1.098194e-49 | -8.615850e-47 |
Msa0186010 | Msa0637580 | 0.805181 | 1.511369e-49 | -8.615850e-47 |
Msa0186010 | Msa0638480 | 0.818263 | 2.147351e-52 | -8.615850e-47 |
Msa0186010 | Msa0679870 | 0.803274 | 3.768926e-49 | -8.615850e-47 |
Msa0186010 | Msa0725000 | 0.815945 | 7.128590e-52 | -8.615850e-47 |
Msa0186010 | Msa0752450 | 0.801664 | 8.092181e-49 | -8.615850e-47 |
Msa0186010 | Msa0762910 | 0.828315 | 9.624286e-55 | -8.615850e-47 |
Msa0186010 | Msa0765270 | 0.804737 | 1.871145e-49 | -8.615850e-47 |
Msa0186010 | Msa0769180 | 0.814833 | 1.259651e-51 | -8.615850e-47 |
Msa0186010 | Msa0792370 | 0.835873 | 1.301846e-56 | -8.615850e-47 |
Msa0186010 | Msa0795870 | 0.824126 | 9.553860e-54 | -8.615850e-47 |
Msa0186010 | Msa0805330 | 0.850897 | 1.261819e-60 | -8.615850e-47 |
Msa0186010 | Msa0829300 | 0.802107 | 6.563861e-49 | -8.615850e-47 |
Msa0186010 | Msa0829330 | 0.815220 | 1.033500e-51 | -8.615850e-47 |
Msa0186010 | Msa0833530 | 0.808645 | 2.798026e-50 | -8.615850e-47 |
Msa0186010 | Msa0833650 | 0.827258 | 1.727365e-54 | -8.615850e-47 |
Msa0186010 | Msa0842680 | 0.837051 | 6.527743e-57 | -8.615850e-47 |
Msa0186010 | Msa0845110 | 0.811623 | 6.382489e-51 | -8.615850e-47 |
Msa0186010 | Msa0847540 | 0.804991 | 1.656172e-49 | -8.615850e-47 |
Msa0186010 | Msa0861510 | 0.800928 | 1.144668e-48 | -8.615850e-47 |
Msa0186010 | Msa0861600 | 0.808743 | 2.665850e-50 | -8.615850e-47 |
Msa0186010 | Msa0967380 | 0.852717 | 3.844080e-61 | -8.615850e-47 |
Msa0186010 | Msa0967870 | 0.824079 | 9.802774e-54 | -8.615850e-47 |
Msa0186010 | Msa1019430 | 0.800359 | 1.495410e-48 | -8.615850e-47 |
Msa0186010 | Msa1029070 | 0.812606 | 3.896323e-51 | -8.615850e-47 |
Msa0186010 | Msa1043370 | 0.822288 | 2.566387e-53 | -8.615850e-47 |
Msa0186010 | Msa1087650 | 0.994909 | 2.834739e-211 | -8.615850e-47 |
Msa0186010 | Msa1089450 | 0.825930 | 3.583698e-54 | -8.615850e-47 |
Msa0186010 | Msa1132840 | 0.822345 | 2.489387e-53 | -8.615850e-47 |
Msa0186010 | Msa1144450 | 0.801004 | 1.104804e-48 | -8.615850e-47 |
Msa0186010 | Msa1155170 | -0.801972 | 6.996743e-49 | -8.615850e-47 |
Msa0186010 | Msa1156160 | 0.807330 | 5.328119e-50 | -8.615850e-47 |
Msa0186010 | Msa1211230 | -0.801277 | 9.713768e-49 | -8.615850e-47 |
Msa0186010 | Msa1225860 | -0.810521 | 1.105815e-50 | -8.615850e-47 |
Msa0186010 | Msa1228200 | 0.834619 | 2.699621e-56 | -8.615850e-47 |
Msa0186010 | Msa1236410 | 0.809969 | 1.454711e-50 | -8.615850e-47 |
Msa0186010 | Msa1238820 | 0.802395 | 5.725303e-49 | -8.615850e-47 |
Msa0186010 | Msa1265650 | 0.801606 | 8.317757e-49 | -8.615850e-47 |
Msa0186010 | Msa1267770 | 0.829748 | 4.326319e-55 | -8.615850e-47 |
Msa0186010 | Msa1285550 | 0.803396 | 3.555714e-49 | -8.615850e-47 |
Msa0186010 | Msa1297230 | 0.815300 | 9.923764e-52 | -8.615850e-47 |
Msa0186010 | Msa1303560 | 0.812152 | 4.895045e-51 | -8.615850e-47 |
Msa0186010 | Msa1303650 | 0.807189 | 5.707141e-50 | -8.615850e-47 |
Msa0186010 | Msa1320670 | 0.803037 | 4.219322e-49 | -8.615850e-47 |
Msa0186010 | Msa1343430 | 0.817949 | 2.528999e-52 | -8.615850e-47 |
Msa0186010 | Msa1355450 | 0.803062 | 4.169411e-49 | -8.615850e-47 |
Msa0186010 | Msa1357790 | 0.949317 | 1.624660e-107 | -8.615850e-47 |
Msa0186010 | Msa1366340 | 0.818955 | 1.496249e-52 | -8.615850e-47 |
Msa0186010 | Msa1373100 | 0.810850 | 9.389498e-51 | -8.615850e-47 |
Msa0186010 | Msa1422950 | 0.810837 | 9.449333e-51 | -8.615850e-47 |
Msa0186010 | Msa1425880 | 0.816489 | 5.387401e-52 | -8.615850e-47 |
Msa0186010 | Msa1446810 | 0.802356 | 5.832319e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186010 | MtrunA17_Chr1g0192791 | 97.761 | 268 | 5 | 1 | 1 | 267 | 1 | 268 | 0.0 | 544 |
Msa0186010 | MtrunA17_Chr5g0413201 | 53.307 | 257 | 104 | 4 | 9 | 259 | 63 | 309 | 8.64e-84 | 253 |
Msa0186010 | MtrunA17_Chr1g0151961 | 48.810 | 252 | 116 | 4 | 18 | 264 | 119 | 362 | 1.69e-70 | 221 |
Msa0186010 | MtrunA17_Chr5g0439391 | 48.996 | 249 | 102 | 4 | 19 | 259 | 47 | 278 | 4.25e-68 | 213 |
Msa0186010 | MtrunA17_Chr2g0289201 | 50.617 | 243 | 106 | 4 | 18 | 256 | 117 | 349 | 4.42e-66 | 210 |
Msa0186010 | MtrunA17_Chr3g0137241 | 35.249 | 261 | 122 | 8 | 19 | 244 | 107 | 355 | 1.96e-37 | 135 |
Msa0186010 | MtrunA17_Chr1g0149651 | 34.538 | 249 | 138 | 6 | 19 | 244 | 174 | 420 | 2.16e-37 | 136 |
Msa0186010 | MtrunA17_Chr5g0398181 | 33.597 | 253 | 145 | 4 | 15 | 244 | 24 | 276 | 1.49e-36 | 131 |
Msa0186010 | MtrunA17_Chr4g0065241 | 33.065 | 248 | 147 | 4 | 16 | 244 | 68 | 315 | 2.77e-36 | 131 |
Msa0186010 | MtrunA17_Chr2g0305101 | 34.274 | 248 | 138 | 6 | 19 | 244 | 95 | 339 | 3.37e-35 | 129 |
Msa0186010 | MtrunA17_Chr6g0479181 | 34.906 | 106 | 67 | 1 | 15 | 120 | 64 | 167 | 8.26e-13 | 65.5 |
Msa0186010 | MtrunA17_Chr7g0240371 | 38.356 | 73 | 43 | 1 | 174 | 246 | 296 | 366 | 5.07e-11 | 62.4 |
Msa0186010 | MtrunA17_Chr4g0008591 | 42.466 | 73 | 39 | 2 | 174 | 246 | 352 | 421 | 5.83e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0186010 | AT1G23380.1 | 50.794 | 252 | 104 | 4 | 17 | 261 | 84 | 322 | 2.38e-82 | 250 |
Msa0186010 | AT1G70510.1 | 50.201 | 249 | 110 | 3 | 17 | 261 | 68 | 306 | 9.23e-81 | 246 |
Msa0186010 | AT1G23380.2 | 50.394 | 254 | 104 | 5 | 17 | 261 | 84 | 324 | 2.56e-80 | 245 |
Msa0186010 | AT1G70510.2 | 49.407 | 253 | 110 | 4 | 17 | 261 | 68 | 310 | 2.47e-78 | 239 |
Msa0186010 | AT1G62360.1 | 50.202 | 247 | 107 | 4 | 18 | 258 | 121 | 357 | 5.93e-68 | 215 |
Msa0186010 | AT4G08150.1 | 47.581 | 248 | 116 | 5 | 18 | 258 | 134 | 374 | 1.11e-66 | 213 |
Msa0186010 | AT1G62990.1 | 34.661 | 251 | 142 | 6 | 15 | 244 | 26 | 275 | 1.78e-39 | 139 |
Msa0186010 | AT5G25220.2 | 35.200 | 250 | 132 | 6 | 19 | 244 | 160 | 403 | 2.50e-38 | 139 |
Msa0186010 | AT5G25220.1 | 35.200 | 250 | 132 | 6 | 19 | 244 | 160 | 403 | 2.80e-38 | 139 |
Msa0186010 | AT5G11060.1 | 35.156 | 256 | 124 | 8 | 19 | 244 | 124 | 367 | 1.90e-37 | 136 |
Msa0186010 | AT4G32040.2 | 34.146 | 246 | 140 | 5 | 19 | 244 | 119 | 362 | 9.55e-37 | 134 |
Msa0186010 | AT4G32040.1 | 34.146 | 246 | 140 | 5 | 19 | 244 | 119 | 362 | 1.14e-36 | 134 |
Msa0186010 | AT1G75430.1 | 49.091 | 55 | 28 | 0 | 192 | 246 | 209 | 263 | 5.16e-11 | 62.4 |
Msa0186010 | AT5G02030.1 | 46.667 | 60 | 32 | 0 | 187 | 246 | 350 | 409 | 8.75e-11 | 62.4 |
Find 98 sgRNAs with CRISPR-Local
Find 820 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTTCTCTTCTTGAAGAAAT+AGG | 0.173162 | 2_1:+647889 | Msa0186010:CDS |
TCTCACGGAAAGCATTATTT+TGG | 0.227729 | 2_1:-647924 | None:intergenic |
ATTTCTCAAGAAAAGGAAAA+AGG | 0.267954 | 2_1:+657824 | Msa0186010:CDS |
AGGGCATAGGCGTATTGTTC+TGG | 0.295882 | 2_1:-658742 | None:intergenic |
ATGATGATTAGCCTTGGATT+TGG | 0.302616 | 2_1:+658988 | Msa0186010:three_prime_UTR |
CTTCTCTTCTTGAAGAAATA+GGG | 0.308161 | 2_1:+647890 | Msa0186010:CDS |
ACAACCAATCGGATCTAATA+AGG | 0.325364 | 2_1:+647543 | Msa0186010:CDS |
ATATAAAGCAGATAAATAAT+TGG | 0.326164 | 2_1:+658497 | Msa0186010:CDS |
TTTACAGTGGGTCATATTGA+TGG | 0.357534 | 2_1:+647438 | Msa0186010:intron |
TTTACCTGAACGGTTGTAAT+CGG | 0.376328 | 2_1:-648272 | None:intergenic |
TGTTGCTTCATTGAAGGGCT+TGG | 0.378477 | 2_1:-648185 | None:intergenic |
ATCCATGACATTCAAGCAAA+AGG | 0.380616 | 2_1:-658680 | None:intergenic |
GTTTATTCTTATTCTGCTGC+TGG | 0.387145 | 2_1:+647471 | Msa0186010:five_prime_UTR |
AATAATGCTTTCCGTGAGAT+AGG | 0.392343 | 2_1:+647928 | Msa0186010:CDS |
GATAGTAGATTTGGATAAAG+AGG | 0.394577 | 2_1:-647611 | None:intergenic |
TCCTGACCTTGACCACTTCA+TGG | 0.397547 | 2_1:+647957 | Msa0186010:CDS |
AAATAATGTTGCTTCATTGA+AGG | 0.405931 | 2_1:-648191 | None:intergenic |
ATTTGTATTACCGTGGGATA+AGG | 0.406677 | 2_1:-657909 | None:intergenic |
AAGTTTCTTGCTAGAGGTGC+AGG | 0.408023 | 2_1:+658958 | Msa0186010:three_prime_UTR |
TCCAAGAAAACCTGGGGAAA+AGG | 0.408702 | 2_1:-646885 | None:intergenic |
TCTGCTGCTGGATTGCATCT+AGG | 0.408994 | 2_1:+647483 | Msa0186010:five_prime_UTR |
GACAGGAATTTCTCAAGAAA+AGG | 0.410633 | 2_1:+657817 | Msa0186010:CDS |
ATTATTAGTTATCTGTTTCG+TGG | 0.419970 | 2_1:+658856 | Msa0186010:three_prime_UTR |
GAAATGCTCCTTCGTAAGTA+CGG | 0.420426 | 2_1:+657774 | Msa0186010:CDS |
AATAATGTTGCTTCATTGAA+GGG | 0.423656 | 2_1:-648190 | None:intergenic |
GGATGCAAGAAAAGCATTGA+TGG | 0.424199 | 2_1:+657860 | Msa0186010:CDS |
GAAAGGAAAGAGTGGAAAGC+TGG | 0.447406 | 2_1:-646957 | None:intergenic |
GGAAAGGTTGAAGCAGTAGA+AGG | 0.448898 | 2_1:+657699 | Msa0186010:CDS |
ATTGGTGGAACGTCCACTAT+AGG | 0.452627 | 2_1:+657883 | Msa0186010:CDS |
TCATCCGATTACAACCGTTC+AGG | 0.455239 | 2_1:+648268 | Msa0186010:CDS |
GGGTTAGATCACGAGGCAGC+AGG | 0.462846 | 2_1:+657651 | Msa0186010:intron |
GCTGGGTTGGCTACAGCACC+TGG | 0.465293 | 2_1:-646939 | None:intergenic |
CCTCTGTAAATTTATTCTGC+AGG | 0.471764 | 2_1:+658610 | Msa0186010:exon |
AAATGCTCCTTCGTAAGTAC+GGG | 0.472749 | 2_1:+657775 | Msa0186010:CDS |
TTACAGAGGTCCTGCTATGC+TGG | 0.477108 | 2_1:-658596 | None:intergenic |
ACCATGAAGTGGTCAAGGTC+AGG | 0.484448 | 2_1:-647958 | None:intergenic |
TGGGATAAGGCCACCTATAG+TGG | 0.485346 | 2_1:-657896 | None:intergenic |
TCCATGACATTCAAGCAAAA+GGG | 0.493060 | 2_1:-658679 | None:intergenic |
CTTCTTTCGCAGATTAAGAC+AGG | 0.496624 | 2_1:-658652 | None:intergenic |
ATTCCTGTCTTAAGTTGCTA+AGG | 0.503658 | 2_1:-657803 | None:intergenic |
CAAGAAAAGCATTGATGGAT+TGG | 0.506407 | 2_1:+657865 | Msa0186010:CDS |
AAAGAGGGTGAGTTGCGATC+TGG | 0.510035 | 2_1:-647595 | None:intergenic |
GTAAGTAGCACCAGCATAGC+AGG | 0.513299 | 2_1:+658586 | Msa0186010:CDS |
AGAAGTGGGAAAGGAAAGAG+TGG | 0.525785 | 2_1:-646965 | None:intergenic |
ATATGATATTAGCTAGGCTT+CGG | 0.529086 | 2_1:+658701 | Msa0186010:three_prime_UTR |
TCTAATAAGGTTGGATATGA+CGG | 0.529171 | 2_1:+647556 | Msa0186010:CDS |
AAAGGAAAGAGTGGAAAGCT+GGG | 0.540723 | 2_1:-646956 | None:intergenic |
AGAAGAGAAGCAAGTTCTGT+TGG | 0.544757 | 2_1:-647877 | None:intergenic |
GAAGAAACAAACATAAGAAG+TGG | 0.546211 | 2_1:-646980 | None:intergenic |
ATAGTAGATTTGGATAAAGA+GGG | 0.546531 | 2_1:-647610 | None:intergenic |
CCAATCGGATCTAATAAGGT+TGG | 0.547810 | 2_1:+647547 | Msa0186010:CDS |
TCTTTAAGCTCTTTATCACC+TGG | 0.551142 | 2_1:-657753 | None:intergenic |
ATAGGCGTATTGTTCTGGAT+TGG | 0.551760 | 2_1:-658737 | None:intergenic |
CCAACCTTATTAGATCCGAT+TGG | 0.554336 | 2_1:-647547 | None:intergenic |
GAAAAGCATTGATGGATTGG+TGG | 0.555034 | 2_1:+657868 | Msa0186010:CDS |
TTACCTTAGCAACTTAAGAC+AGG | 0.555596 | 2_1:+657800 | Msa0186010:CDS |
GAAAGAGTGGAAAGCTGGGT+TGG | 0.556200 | 2_1:-646952 | None:intergenic |
AATTTGAAGTTTCTTGCTAG+AGG | 0.556900 | 2_1:+658952 | Msa0186010:three_prime_UTR |
ACAACTAAACGAACTTTGCA+AGG | 0.560050 | 2_1:+648231 | Msa0186010:CDS |
GAAAATCTCATATCTTCAGA+TGG | 0.560173 | 2_1:-658550 | None:intergenic |
AGTGGGTCATATTGATGGCA+AGG | 0.560418 | 2_1:+647443 | Msa0186010:intron |
TCACATGGAACACAACCAAT+CGG | 0.562048 | 2_1:+647532 | Msa0186010:exon |
CTGCAGCTGTCAGATATGAC+TGG | 0.564508 | 2_1:+658469 | Msa0186010:CDS |
TTAAGTTCTCTTTACCTGAA+CGG | 0.565840 | 2_1:-648282 | None:intergenic |
TCAGAGGATGAAATGAGTTG+TGG | 0.568316 | 2_1:+657678 | Msa0186010:CDS |
CTGTAAATTTATTCTGCAGG+TGG | 0.571978 | 2_1:+658613 | Msa0186010:exon |
ACCTGGGGAAAAGGAAAGAG+AGG | 0.574069 | 2_1:-646876 | None:intergenic |
AATATACCATGAAGTGGTCA+AGG | 0.574865 | 2_1:-647963 | None:intergenic |
TAAAAGAATATACCATGAAG+TGG | 0.580028 | 2_1:-647969 | None:intergenic |
ACAGACCTACTCAGTGACAT+AGG | 0.581393 | 2_1:-658787 | None:intergenic |
TCAATCAGAGGAAAAGACAC+TGG | 0.584588 | 2_1:+658524 | Msa0186010:CDS |
AAGAATACTCTCCAAATCCA+AGG | 0.590642 | 2_1:-658999 | None:intergenic |
AAGAAACAAACATAAGAAGT+GGG | 0.593665 | 2_1:-646979 | None:intergenic |
ACAAACATAAGAAGTGGGAA+AGG | 0.594386 | 2_1:-646974 | None:intergenic |
CAGGATCATCTCCTATCTCA+CGG | 0.597806 | 2_1:-647939 | None:intergenic |
TCATGGATATGATATTAGCT+AGG | 0.597845 | 2_1:+658695 | Msa0186010:three_prime_UTR |
CTACTCAGTGACATAGGTGC+CGG | 0.599631 | 2_1:-658781 | None:intergenic |
CTTTGTGGCACATCATGTCC+AGG | 0.602003 | 2_1:+657735 | Msa0186010:CDS |
ATTGGTTGTGTTCCATGTGA+AGG | 0.604142 | 2_1:-647529 | None:intergenic |
GGGGAAAAGGAAAGAGAGGA+AGG | 0.606019 | 2_1:-646872 | None:intergenic |
GGTGGTCATGATGAACTTTG+TGG | 0.607949 | 2_1:+657720 | Msa0186010:CDS |
GGTTAGATCACGAGGCAGCA+GGG | 0.610469 | 2_1:+657652 | Msa0186010:intron |
CTATAGGTGGCCTTATCCCA+CGG | 0.616947 | 2_1:+657899 | Msa0186010:CDS |
CAACTAAACGAACTTTGCAA+GGG | 0.626350 | 2_1:+648232 | Msa0186010:CDS |
AACTAAACGAACTTTGCAAG+GGG | 0.629556 | 2_1:+648233 | Msa0186010:CDS |
ATAATTGGTTCATCAATCAG+AGG | 0.632866 | 2_1:+658512 | Msa0186010:CDS |
CGGCACCTATGTCACTGAGT+AGG | 0.637662 | 2_1:+658782 | Msa0186010:three_prime_UTR |
CGAGGCAGCAGGGACATCAG+AGG | 0.640139 | 2_1:+657662 | Msa0186010:CDS |
AGTTCTTCATAGATACAAAG+AGG | 0.649236 | 2_1:+648156 | Msa0186010:CDS |
GGTGGAACGTCCACTATAGG+TGG | 0.655633 | 2_1:+657886 | Msa0186010:CDS |
TAATAATAACTACCTTCACA+TGG | 0.656128 | 2_1:+647517 | Msa0186010:exon |
GCTGCTGGATTGCATCTAGG+AGG | 0.656462 | 2_1:+647486 | Msa0186010:five_prime_UTR |
GGATGAAATGAGTTGTGGAA+AGG | 0.661174 | 2_1:+657683 | Msa0186010:CDS |
AGGCACACACTCTCACAACA+AGG | 0.668052 | 2_1:-646852 | None:intergenic |
AAGGTTGAAGCAGTAGAAGG+TGG | 0.681013 | 2_1:+657702 | Msa0186010:CDS |
AATGCTCCTTCGTAAGTACG+GGG | 0.701629 | 2_1:+657776 | Msa0186010:CDS |
CCTGCAGAATAAATTTACAG+AGG | 0.707916 | 2_1:-658610 | None:intergenic |
ATGCTCCTTCGTAAGTACGG+GGG | 0.733963 | 2_1:+657777 | Msa0186010:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATAATTTATATATTAA+AGG | - | chr2_1:654243-654262 | None:intergenic | 0.0% |
!! | TTAATATATAAATTATATAT+AGG | + | chr2_1:654243-654262 | Msa0186010:intron | 0.0% |
!! | TTTATAATATTATACGAATA+TGG | + | chr2_1:647055-647074 | Msa0186010:intron | 10.0% |
!! | AACATATTATATCATATATA+TGG | - | chr2_1:647173-647192 | None:intergenic | 10.0% |
!! | AAAAAAATATAGTAGAAAAT+TGG | - | chr2_1:648016-648035 | None:intergenic | 10.0% |
!!! | ATAGGTAAATTATAAAATTT+TGG | + | chr2_1:654261-654280 | Msa0186010:intron | 10.0% |
!!! | TTTTTTTTTTAAAAAAAAGC+CGG | - | chr2_1:654922-654941 | None:intergenic | 10.0% |
!! | TATAAAATGAATTTGAATTT+CGG | + | chr2_1:655025-655044 | Msa0186010:intron | 10.0% |
!! | CTATACATTAAATAAAAATT+TGG | + | chr2_1:655688-655707 | Msa0186010:intron | 10.0% |
!!! | AATTTTAATAACTACATTTT+TGG | - | chr2_1:655886-655905 | None:intergenic | 10.0% |
!! | TAGTTATTAAAATTTATTTG+AGG | + | chr2_1:655892-655911 | Msa0186010:intron | 10.0% |
!!! | AATATTTTTTTTTTGTACAA+TGG | - | chr2_1:656268-656287 | None:intergenic | 10.0% |
!! | TATTAAAAAAAATTATGTTG+TGG | + | chr2_1:657568-657587 | Msa0186010:intron | 10.0% |
!! | ATATTATATCATATATATGG+TGG | - | chr2_1:647170-647189 | None:intergenic | 15.0% |
!!! | TATAGTTTTATACGTATAAT+TGG | + | chr2_1:647310-647329 | Msa0186010:intron | 15.0% |
!!! | ATATAGAATAAAAAACCTTT+TGG | - | chr2_1:647652-647671 | None:intergenic | 15.0% |
!! | ATTACATTAATTAAATCAGA+TGG | + | chr2_1:648036-648055 | Msa0186010:intron | 15.0% |
!!! | AACATTTAATTTATTACACT+TGG | + | chr2_1:648112-648131 | Msa0186010:intron | 15.0% |
!! | AAAAATATCCAGATATTTAA+AGG | - | chr2_1:648323-648342 | None:intergenic | 15.0% |
!! | AAATTAACAAAAAATACACA+AGG | + | chr2_1:648679-648698 | Msa0186010:intron | 15.0% |
!!! | TTTGAAGGATTATTTTTATA+AGG | + | chr2_1:651018-651037 | Msa0186010:intron | 15.0% |
!! | AAAATCATCAGAAAATTTAA+TGG | + | chr2_1:652133-652152 | Msa0186010:intron | 15.0% |
!! | AACATAAATATAAATCGTTT+AGG | + | chr2_1:654372-654391 | Msa0186010:intron | 15.0% |
!! | ATTAAAATCCATATTATTGT+CGG | - | chr2_1:655000-655019 | None:intergenic | 15.0% |
!!! | TTTAAATGTTCTTTTTGTAT+AGG | - | chr2_1:655549-655568 | None:intergenic | 15.0% |
!!! | ACGTGAAAATTTTAAAATTT+AGG | - | chr2_1:656875-656894 | None:intergenic | 15.0% |
!! | TTCATGTCAATATATTAAAA+TGG | - | chr2_1:657357-657376 | None:intergenic | 15.0% |
!! | TTGATTATATATCTGATAAA+AGG | + | chr2_1:658208-658227 | Msa0186010:intron | 15.0% |
!!! | TATAATTTGATGAATTTTTC+AGG | + | chr2_1:658435-658454 | Msa0186010:intron | 15.0% |
!! | ATATAAAGCAGATAAATAAT+TGG | + | chr2_1:658497-658516 | Msa0186010:CDS | 15.0% |
!!! | ATATTTTTCACTCAATCATA+TGG | + | chr2_1:647688-647707 | Msa0186010:intron | 20.0% |
!! | ATTAATTAAATCAGATGGAA+TGG | + | chr2_1:648041-648060 | Msa0186010:intron | 20.0% |
!! | TATTATCGTACATAATTAGA+GGG | - | chr2_1:648459-648478 | None:intergenic | 20.0% |
!! | TTATTATCGTACATAATTAG+AGG | - | chr2_1:648460-648479 | None:intergenic | 20.0% |
!! | CTAATTATGTACGATAATAA+TGG | + | chr2_1:648460-648479 | Msa0186010:intron | 20.0% |
!! | GGAATGATAAATATTTATCA+TGG | - | chr2_1:649137-649156 | None:intergenic | 20.0% |
!! | AAATTCAAGATTAAGGATTT+GGG | - | chr2_1:649992-650011 | None:intergenic | 20.0% |
!! | TAAATTCAAGATTAAGGATT+TGG | - | chr2_1:649993-650012 | None:intergenic | 20.0% |
!!! | AATTTGAAGTTGAATTGAAA+GGG | + | chr2_1:650908-650927 | Msa0186010:intron | 20.0% |
!! | TATAAGGAAAAATACTTTCA+TGG | + | chr2_1:651034-651053 | Msa0186010:intron | 20.0% |
!!! | ATTTTTCTTGGTTATAAAAG+TGG | - | chr2_1:651126-651145 | None:intergenic | 20.0% |
!! | TGATTGTGTAATAGAAAATA+AGG | + | chr2_1:651246-651265 | Msa0186010:intron | 20.0% |
!! | AAAATTGTTAGAAGTGATAA+TGG | - | chr2_1:651507-651526 | None:intergenic | 20.0% |
!! | ATAACCTTAATGAAATCTAA+AGG | - | chr2_1:651594-651613 | None:intergenic | 20.0% |
!!! | AATTGTATTGTGAGTTTTAA+TGG | - | chr2_1:652038-652057 | None:intergenic | 20.0% |
!!! | TAAGTCTCAAATTTTGTTAA+TGG | - | chr2_1:652834-652853 | None:intergenic | 20.0% |
!!! | GTTTTACACAATAACATATA+TGG | + | chr2_1:653979-653998 | Msa0186010:intron | 20.0% |
!! | ATAAAGCCAAAAAACATTTA+GGG | - | chr2_1:654582-654601 | None:intergenic | 20.0% |
!!! | TTTTTTGGCTTTATGTTATT+TGG | + | chr2_1:654588-654607 | Msa0186010:intron | 20.0% |
!!! | TGTTATTTGGATTATTTGTA+AGG | + | chr2_1:654601-654620 | Msa0186010:intron | 20.0% |
!!! | TTTCTTTGTCAAACTTTTTT+CGG | + | chr2_1:654844-654863 | Msa0186010:intron | 20.0% |
!!! | GTTAAACAAATTTTTGCTAT+GGG | - | chr2_1:655056-655075 | None:intergenic | 20.0% |
!!! | TGTTAAACAAATTTTTGCTA+TGG | - | chr2_1:655057-655076 | None:intergenic | 20.0% |
!! | ATATTTGCATTCATCTAATA+TGG | + | chr2_1:655142-655161 | Msa0186010:intron | 20.0% |
!!! | TGTTTTTCAATGAAGATTAT+TGG | + | chr2_1:655187-655206 | Msa0186010:intron | 20.0% |
!!! | AAATTCAAGTTTAGTTTAGT+TGG | + | chr2_1:655494-655513 | Msa0186010:intron | 20.0% |
!!! | AATTCAAGTTTAGTTTAGTT+GGG | + | chr2_1:655495-655514 | Msa0186010:intron | 20.0% |
!! | TCCAATATAAAAACTTAACT+TGG | + | chr2_1:655777-655796 | Msa0186010:intron | 20.0% |
!!! | AAATTTATTTGAGGTTTGAT+AGG | + | chr2_1:655901-655920 | Msa0186010:intron | 20.0% |
!!! | AATTTATTTGAGGTTTGATA+GGG | + | chr2_1:655902-655921 | Msa0186010:intron | 20.0% |
!!! | GGTTTTAATATCAAATTGAT+TGG | + | chr2_1:656006-656025 | Msa0186010:intron | 20.0% |
!! | ATTGAATTTCTATAAAACAG+TGG | + | chr2_1:657084-657103 | Msa0186010:intron | 20.0% |
!! | TCTCACTAATAATAAAATGT+TGG | + | chr2_1:657322-657341 | Msa0186010:intron | 20.0% |
!! | ACTAATAATAAAATGTTGGA+GGG | + | chr2_1:657326-657345 | Msa0186010:intron | 20.0% |
!!! | TTGTACTAATTAAGTTGATA+TGG | + | chr2_1:657517-657536 | Msa0186010:intron | 20.0% |
!!! | ATTTCATTTTGTCCTTTTTT+TGG | + | chr2_1:657630-657649 | Msa0186010:intron | 20.0% |
!!! | TTTCATTTTGTCCTTTTTTT+GGG | + | chr2_1:657631-657650 | Msa0186010:intron | 20.0% |
!! | TCATCAAATTATAATCTATC+AGG | - | chr2_1:658428-658447 | None:intergenic | 20.0% |
!!! | AGATATGAGATTTTCTATTA+TGG | + | chr2_1:658558-658577 | Msa0186010:CDS | 20.0% |
! | GGAAAAGAAAAGCAAAAATA+AGG | + | chr2_1:646905-646924 | Msa0186010:five_prime_UTR | 25.0% |
! | AAGAAACAAACATAAGAAGT+GGG | - | chr2_1:646982-647001 | None:intergenic | 25.0% |
! | GTATAAAACTATAGTACTAC+TGG | - | chr2_1:647303-647322 | None:intergenic | 25.0% |
! | TAATAATAACTACCTTCACA+TGG | + | chr2_1:647517-647536 | Msa0186010:exon | 25.0% |
! | ATAGTAGATTTGGATAAAGA+GGG | - | chr2_1:647613-647632 | None:intergenic | 25.0% |
! | AAAAAAGCAGATAGTAGATT+TGG | - | chr2_1:647623-647642 | None:intergenic | 25.0% |
! | ATACTATATATTGTGCATGA+AGG | + | chr2_1:647846-647865 | Msa0186010:intron | 25.0% |
! | TAAAAGAATATACCATGAAG+TGG | - | chr2_1:647972-647991 | None:intergenic | 25.0% |
! | ATATAGTAGAAAATTGGACT+TGG | - | chr2_1:648010-648029 | None:intergenic | 25.0% |
!! | ATTTATTACACTTGGTGATT+AGG | + | chr2_1:648120-648139 | Msa0186010:intron | 25.0% |
!! | AATAATGTTGCTTCATTGAA+GGG | - | chr2_1:648193-648212 | None:intergenic | 25.0% |
!! | AAATAATGTTGCTTCATTGA+AGG | - | chr2_1:648194-648213 | None:intergenic | 25.0% |
! | TCATAATGCCTTTAAATATC+TGG | + | chr2_1:648312-648331 | Msa0186010:intron | 25.0% |
! | TCGTGTTACAAAAAAGAAAA+GGG | - | chr2_1:648432-648451 | None:intergenic | 25.0% |
! | TTCGTGTTACAAAAAAGAAA+AGG | - | chr2_1:648433-648452 | None:intergenic | 25.0% |
!!! | TTTCTTTTTTGTAACACGAA+TGG | + | chr2_1:648433-648452 | Msa0186010:intron | 25.0% |
! | GTTACAATGATCTCTTATAT+AGG | + | chr2_1:648846-648865 | Msa0186010:intron | 25.0% |
!! | CTTATATAGGTTGTTATTGT+AGG | + | chr2_1:648859-648878 | Msa0186010:intron | 25.0% |
! | AACTAACTTCCTAGTTTATA+GGG | - | chr2_1:648934-648953 | None:intergenic | 25.0% |
! | TAACTAACTTCCTAGTTTAT+AGG | - | chr2_1:648935-648954 | None:intergenic | 25.0% |
! | AATATTTATCATTCCAAGCT+TGG | + | chr2_1:649142-649161 | Msa0186010:intron | 25.0% |
! | GATATAAATTGGTTGAACTT+TGG | + | chr2_1:649164-649183 | Msa0186010:intron | 25.0% |
! | AATTCAAGATTAAGGATTTG+GGG | - | chr2_1:649991-650010 | None:intergenic | 25.0% |
! | AGATGCTAAATTCAAGATTA+AGG | - | chr2_1:649999-650018 | None:intergenic | 25.0% |
!!! | TTATGTTGATGACATCATAT+TGG | - | chr2_1:650065-650084 | None:intergenic | 25.0% |
! | ATGCATTGTTAACATCTAAT+TGG | + | chr2_1:650317-650336 | Msa0186010:intron | 25.0% |
!!! | AGAAAGTATCAAAAAAATCC+AGG | + | chr2_1:650410-650429 | Msa0186010:intron | 25.0% |
! | AGTACTTTGAGTAATAGAAA+TGG | + | chr2_1:650660-650679 | Msa0186010:intron | 25.0% |
! | AAAAGAGTGAAAATCAGTAA+TGG | + | chr2_1:650714-650733 | Msa0186010:intron | 25.0% |
! | AAAGAGTGAAAATCAGTAAT+GGG | + | chr2_1:650715-650734 | Msa0186010:intron | 25.0% |
! | CTTGTAGATTTATGTATAAC+AGG | + | chr2_1:650829-650848 | Msa0186010:intron | 25.0% |
!! | GAATTTGAAGTTGAATTGAA+AGG | + | chr2_1:650907-650926 | Msa0186010:intron | 25.0% |
!!! | CCAAAGAAATTTTTGTTTCT+AGG | - | chr2_1:651071-651090 | None:intergenic | 25.0% |
! | CCTAGAAACAAAAATTTCTT+TGG | + | chr2_1:651068-651087 | Msa0186010:intron | 25.0% |
!! | ATGCATCAATTGAAAGTTTT+TGG | - | chr2_1:651216-651235 | None:intergenic | 25.0% |
! | AGGTGTTTGATTGTTTAAAA+TGG | + | chr2_1:651266-651285 | Msa0186010:intron | 25.0% |
!! | GGTGTTTGATTGTTTAAAAT+GGG | + | chr2_1:651267-651286 | Msa0186010:intron | 25.0% |
!! | GTGTTTGATTGTTTAAAATG+GGG | + | chr2_1:651268-651287 | Msa0186010:intron | 25.0% |
! | TTCACCTTTAGATTTCATTA+AGG | + | chr2_1:651587-651606 | Msa0186010:intron | 25.0% |
!!! | ATGATTTTAGTAGATTCACT+TGG | - | chr2_1:651617-651636 | None:intergenic | 25.0% |
! | TGAACAGAAGAAATTGAAAT+AGG | + | chr2_1:651666-651685 | Msa0186010:intron | 25.0% |
!!! | ATTGATGCATTTTGACATTT+GGG | - | chr2_1:651694-651713 | None:intergenic | 25.0% |
!!! | AATTGATGCATTTTGACATT+TGG | - | chr2_1:651695-651714 | None:intergenic | 25.0% |
! | TCAAAATGCATCAATTCAAA+GGG | + | chr2_1:651699-651718 | Msa0186010:intron | 25.0% |
! | TTATTACAACTTTCAGGAAA+TGG | + | chr2_1:651732-651751 | Msa0186010:intron | 25.0% |
! | TTAGAATCTACATAGACAAA+AGG | + | chr2_1:651798-651817 | Msa0186010:intron | 25.0% |
! | ATGAGATTAAAGTGAAATTC+AGG | + | chr2_1:652086-652105 | Msa0186010:intron | 25.0% |
! | TGAGATTAAAGTGAAATTCA+GGG | + | chr2_1:652087-652106 | Msa0186010:intron | 25.0% |
! | ACTAACATAAAACTTCCTAA+TGG | - | chr2_1:652188-652207 | None:intergenic | 25.0% |
!!! | TTAGGAAGTTTTATGTTAGT+AGG | + | chr2_1:652188-652207 | Msa0186010:intron | 25.0% |
! | ACATTTGTGGAAATCTAAAA+TGG | - | chr2_1:652238-652257 | None:intergenic | 25.0% |
!! | ACAATTTTACTCTAAGTTCT+TGG | - | chr2_1:652286-652305 | None:intergenic | 25.0% |
!! | TTTGAATGAGAATTTTGCTA+TGG | - | chr2_1:652858-652877 | None:intergenic | 25.0% |
!! | TGCATTTTCCATGAAAATTA+TGG | + | chr2_1:653141-653160 | Msa0186010:intron | 25.0% |
! | GTTACAATGATCTCTTATAT+AGG | + | chr2_1:648846-648865 | Msa0186010:intron | 25.0% |
!! | CTTATATAGGTTGTTATTGT+AGG | + | chr2_1:648859-648878 | Msa0186010:intron | 25.0% |
! | AACTAACTTCCTAGTTTATA+GGG | - | chr2_1:648934-648953 | None:intergenic | 25.0% |
! | TAACTAACTTCCTAGTTTAT+AGG | - | chr2_1:648935-648954 | None:intergenic | 25.0% |
! | ATTAATTACATCCACAATTG+AGG | + | chr2_1:654055-654074 | Msa0186010:intron | 25.0% |
! | CTGCAATTAGAATAATGATA+TGG | + | chr2_1:654080-654099 | Msa0186010:intron | 25.0% |
!!! | TTAGGGATTTTTTTTGCATA+AGG | + | chr2_1:654547-654566 | Msa0186010:intron | 25.0% |
! | CATAAAGCCAAAAAACATTT+AGG | - | chr2_1:654583-654602 | None:intergenic | 25.0% |
! | TTTAATATATCGTTTCCTTC+CGG | + | chr2_1:654900-654919 | Msa0186010:intron | 25.0% |
!!! | TTTTTTAAAAAAAAGCCGGA+AGG | - | chr2_1:654918-654937 | None:intergenic | 25.0% |
! | AGATGAATGCAAATATACAA+TGG | - | chr2_1:655138-655157 | None:intergenic | 25.0% |
!!! | CAGTATTTTTGTGAAAATTC+GGG | - | chr2_1:655351-655370 | None:intergenic | 25.0% |
!!! | GCAGTATTTTTGTGAAAATT+CGG | - | chr2_1:655352-655371 | None:intergenic | 25.0% |
! | TTACCAAAGAAATTGAATGT+GGG | - | chr2_1:655476-655495 | None:intergenic | 25.0% |
! | TTTACCAAAGAAATTGAATG+TGG | - | chr2_1:655477-655496 | None:intergenic | 25.0% |
!! | GCCAAGTTAAGTTTTTATAT+TGG | - | chr2_1:655781-655800 | None:intergenic | 25.0% |
! | TGATCAAATCACAAAACTAA+AGG | + | chr2_1:656030-656049 | Msa0186010:intron | 25.0% |
! | GATCAAATCACAAAACTAAA+GGG | + | chr2_1:656031-656050 | Msa0186010:intron | 25.0% |
! | TATGGTCTACAATTAAAACT+TGG | - | chr2_1:656176-656195 | None:intergenic | 25.0% |
!!! | TTTTTTTTGTACAATGGAGA+CGG | - | chr2_1:656262-656281 | None:intergenic | 25.0% |
!! | ATTTTTGTATATCATCACAG+TGG | + | chr2_1:656285-656304 | Msa0186010:intron | 25.0% |
! | ATTTAATTCAGATACTTCGT+GGG | - | chr2_1:656566-656585 | None:intergenic | 25.0% |
! | TATTTAATTCAGATACTTCG+TGG | - | chr2_1:656567-656586 | None:intergenic | 25.0% |
!! | GAAGTATCTTATAAGTATCT+TGG | - | chr2_1:656645-656664 | None:intergenic | 25.0% |
! | ACATATCCTAGAAAAAATGA+AGG | + | chr2_1:656671-656690 | Msa0186010:intron | 25.0% |
! | CATATCCTAGAAAAAATGAA+GGG | + | chr2_1:656672-656691 | Msa0186010:intron | 25.0% |
!!! | TTTTACCCTTCATTTTTTCT+AGG | - | chr2_1:656680-656699 | None:intergenic | 25.0% |
! | ACAACACATAAAATTTACCT+TGG | - | chr2_1:657205-657224 | None:intergenic | 25.0% |
! | GTACGTGAAATAAAATGATT+GGG | - | chr2_1:657274-657293 | None:intergenic | 25.0% |
! | CACTAATAATAAAATGTTGG+AGG | + | chr2_1:657325-657344 | Msa0186010:intron | 25.0% |
! | CTAATAATAAAATGTTGGAG+GGG | + | chr2_1:657327-657346 | Msa0186010:intron | 25.0% |
! | TAATAATAAAATGTTGGAGG+GGG | + | chr2_1:657328-657347 | Msa0186010:intron | 25.0% |
!! | ATTGAAGCTATAGAAAGTAT+AGG | + | chr2_1:657379-657398 | Msa0186010:intron | 25.0% |
!! | TTGAAGCTATAGAAAGTATA+GGG | + | chr2_1:657380-657399 | Msa0186010:intron | 25.0% |
! | ATTTCTCAAGAAAAGGAAAA+AGG | + | chr2_1:657824-657843 | Msa0186010:CDS | 25.0% |
! | TTTCTCAAGAAAAGGAAAAA+GGG | + | chr2_1:657825-657844 | Msa0186010:CDS | 25.0% |
!! | TGTTTGTACTAGAAAACTTT+TGG | + | chr2_1:658263-658282 | Msa0186010:intron | 25.0% |
!!! | AATTTGATGAATTTTTCAGG+AGG | + | chr2_1:658438-658457 | Msa0186010:intron | 25.0% |
!! | TATGAGATTTTCTATTATGG+AGG | + | chr2_1:658561-658580 | Msa0186010:CDS | 25.0% |
!! | ATGAGATTTTCTATTATGGA+GGG | + | chr2_1:658562-658581 | Msa0186010:CDS | 25.0% |
! | ATTATTAGTTATCTGTTTCG+TGG | + | chr2_1:658856-658875 | Msa0186010:three_prime_UTR | 25.0% |
! | TTTCTTTTCCAAGAAAACCT+GGG | - | chr2_1:646895-646914 | None:intergenic | 30.0% |
! | TTTTCTTTTCCAAGAAAACC+TGG | - | chr2_1:646896-646915 | None:intergenic | 30.0% |
AGAAAAGCAAAAATAAGGTC+TGG | + | chr2_1:646910-646929 | Msa0186010:five_prime_UTR | 30.0% | |
GAAGAAACAAACATAAGAAG+TGG | - | chr2_1:646983-647002 | None:intergenic | 30.0% | |
! | TATGGATTATATTCTCCACT+AGG | + | chr2_1:647073-647092 | Msa0186010:intron | 30.0% |
!!! | AGGTTTTTTATTTCACCTAG+TGG | - | chr2_1:647091-647110 | None:intergenic | 30.0% |
GGTGAAATAAAAAACCTACA+CGG | + | chr2_1:647094-647113 | Msa0186010:intron | 30.0% | |
GTGAAATAAAAAACCTACAC+GGG | + | chr2_1:647095-647114 | Msa0186010:intron | 30.0% | |
CAAGTGAGTTTAGATATACA+TGG | + | chr2_1:647387-647406 | Msa0186010:intron | 30.0% | |
TCTAATAAGGTTGGATATGA+CGG | + | chr2_1:647556-647575 | Msa0186010:CDS | 30.0% | |
GATAGTAGATTTGGATAAAG+AGG | - | chr2_1:647614-647633 | None:intergenic | 30.0% | |
!!! | TGCTTTTTTAGAATGCCAAA+AGG | + | chr2_1:647634-647653 | Msa0186010:CDS | 30.0% |
TATATATTGTGCATGAAGGT+TGG | + | chr2_1:647850-647869 | Msa0186010:intron | 30.0% | |
ATATATTGTGCATGAAGGTT+GGG | + | chr2_1:647851-647870 | Msa0186010:intron | 30.0% | |
CTTCTCTTCTTGAAGAAATA+GGG | + | chr2_1:647890-647909 | Msa0186010:CDS | 30.0% | |
AGTTCTTCATAGATACAAAG+AGG | + | chr2_1:648156-648175 | Msa0186010:CDS | 30.0% | |
TTAAGTTCTCTTTACCTGAA+CGG | - | chr2_1:648285-648304 | None:intergenic | 30.0% | |
TCAGGTAAAGAGAACTTAAT+TGG | + | chr2_1:648286-648305 | Msa0186010:intron | 30.0% | |
! | TGGTTACTCAACATTCTTTT+TGG | - | chr2_1:648751-648770 | None:intergenic | 30.0% |
! | TCTCTTTTCTTCAATGTTCT+TGG | - | chr2_1:648771-648790 | None:intergenic | 30.0% |
TGTTGAAACACAGTACAAAA+AGG | - | chr2_1:649097-649116 | None:intergenic | 30.0% | |
TTCCAAGCTTGGATATAAAT+TGG | + | chr2_1:649153-649172 | Msa0186010:intron | 30.0% | |
AACCAATTTATATCCAAGCT+TGG | - | chr2_1:649158-649177 | None:intergenic | 30.0% | |
ATAAATTGGTTGAACTTTGG+AGG | + | chr2_1:649167-649186 | Msa0186010:intron | 30.0% | |
TATATCAACACATGAGCAAT+TGG | - | chr2_1:649219-649238 | None:intergenic | 30.0% | |
! | AATTGCTCATGTGTTGATAT+AGG | + | chr2_1:649218-649237 | Msa0186010:intron | 30.0% |
GTCAGAGAAAAGATTCAAAA+AGG | - | chr2_1:649260-649279 | None:intergenic | 30.0% | |
! | TTTGAATCTTTTCTCTGACA+AGG | + | chr2_1:649261-649280 | Msa0186010:intron | 30.0% |
! | TGACTTTCAAGTCCTTTAAA+AGG | + | chr2_1:649390-649409 | Msa0186010:intron | 30.0% |
CTTTGTAATGTGTGATTGTT+GGG | + | chr2_1:649684-649703 | Msa0186010:intron | 30.0% | |
TTTGTAATGTGTGATTGTTG+GGG | + | chr2_1:649685-649704 | Msa0186010:intron | 30.0% | |
!! | AACTTGAGAGAAGTATCTAA+AGG | + | chr2_1:649839-649858 | Msa0186010:intron | 30.0% |
CCTCAAATATTTCTTAGGAT+TGG | - | chr2_1:649966-649985 | None:intergenic | 30.0% | |
CCAATCCTAAGAAATATTTG+AGG | + | chr2_1:649963-649982 | Msa0186010:intron | 30.0% | |
CTTGAATTTAGCATCTAGAA+TGG | + | chr2_1:650003-650022 | Msa0186010:intron | 30.0% | |
GTTATGTTGAAGAGTGAATA+AGG | + | chr2_1:650108-650127 | Msa0186010:intron | 30.0% | |
AAACTGCAGAAAAGTCTTTA+TGG | - | chr2_1:650220-650239 | None:intergenic | 30.0% | |
TATTCATGAGTATACCAGAA+GGG | - | chr2_1:650270-650289 | None:intergenic | 30.0% | |
GTTAACAATGCATTTCTTCA+TGG | - | chr2_1:650310-650329 | None:intergenic | 30.0% | |
!!! | TAAATGCCAGTTTTGAATAG+AGG | + | chr2_1:650342-650361 | Msa0186010:intron | 30.0% |
GGTATATAGAGTGAAACATA+AGG | - | chr2_1:650500-650519 | None:intergenic | 30.0% | |
GGCTATGAATGATGAATTAA+AGG | - | chr2_1:650593-650612 | None:intergenic | 30.0% | |
!!! | GACTGATTTTGATGATGAAA+TGG | + | chr2_1:650756-650775 | Msa0186010:intron | 30.0% |
ATGTAATCTTTCAAATAGCC+CGG | + | chr2_1:650793-650812 | Msa0186010:intron | 30.0% | |
GTAGATTTATGTATAACAGG+TGG | + | chr2_1:650832-650851 | Msa0186010:intron | 30.0% | |
TAATCCTTCAAATGTCTCAT+GGG | - | chr2_1:651010-651029 | None:intergenic | 30.0% | |
ATAATCCTTCAAATGTCTCA+TGG | - | chr2_1:651011-651030 | None:intergenic | 30.0% | |
GGTTATAAAAGTGGTATGAA+AGG | - | chr2_1:651117-651136 | None:intergenic | 30.0% | |
!! | GCAAGAAAGTGTATTTTTCT+TGG | - | chr2_1:651138-651157 | None:intergenic | 30.0% |
! | GCATATGACCAAAAAGTTTT+AGG | + | chr2_1:651330-651349 | Msa0186010:intron | 30.0% |
!!! | ACCAAAAAGTTTTAGGTAAG+TGG | + | chr2_1:651337-651356 | Msa0186010:intron | 30.0% |
!!! | CCAAAAAGTTTTAGGTAAGT+GGG | + | chr2_1:651338-651357 | Msa0186010:intron | 30.0% |
!! | TTGATGCATTTTGACATTTG+GGG | - | chr2_1:651693-651712 | None:intergenic | 30.0% |
GTCAAAATGCATCAATTCAA+AGG | + | chr2_1:651698-651717 | Msa0186010:intron | 30.0% | |
!! | TCAGCTTTATTACAACTTTC+AGG | + | chr2_1:651726-651745 | Msa0186010:intron | 30.0% |
! | TAAGGACTTCATTCTAGAAA+AGG | + | chr2_1:651833-651852 | Msa0186010:intron | 30.0% |
AAGAAAACCAAGAAGATGAT+TGG | - | chr2_1:651993-652012 | None:intergenic | 30.0% | |
TTAACTATGGCAAATCAATC+TGG | - | chr2_1:652161-652180 | None:intergenic | 30.0% | |
TCCTAATGGTCATTTAACTA+TGG | - | chr2_1:652174-652193 | None:intergenic | 30.0% | |
ATCTGCTAATCATATTGCAA+AGG | - | chr2_1:652537-652556 | None:intergenic | 30.0% | |
! | AAGAACCAAAAGTCTTTTGA+AGG | + | chr2_1:652558-652577 | Msa0186010:intron | 30.0% |
ATCAAAACTGAATCTTCACT+AGG | + | chr2_1:652737-652756 | Msa0186010:intron | 30.0% | |
! | GTTTTACAACATGAAAGACA+AGG | - | chr2_1:652776-652795 | None:intergenic | 30.0% |
TCTTTCATGTTGTAAAACCA+TGG | + | chr2_1:652778-652797 | Msa0186010:intron | 30.0% | |
! | CATGAACAAAATCTTTTCCA+TGG | - | chr2_1:652798-652817 | None:intergenic | 30.0% |
! | CATGGAAAAGATTTTGTTCA+TGG | + | chr2_1:652796-652815 | Msa0186010:intron | 30.0% |
! | GAAAAGATTTTGTTCATGGA+AGG | + | chr2_1:652800-652819 | Msa0186010:intron | 30.0% |
! | ATTTTGTTCATGGAAGGTAA+TGG | + | chr2_1:652806-652825 | Msa0186010:intron | 30.0% |
TATGCAATTAGATTTCTCAC+TGG | - | chr2_1:652881-652900 | None:intergenic | 30.0% | |
AATCTTCAACTCAGAGTAAA+AGG | + | chr2_1:653006-653025 | Msa0186010:intron | 30.0% | |
! | AAGATTTTCTCAAGGAGATT+TGG | - | chr2_1:653095-653114 | None:intergenic | 30.0% |
! | CTGAAAGAAAGATTTTCTCA+AGG | - | chr2_1:653103-653122 | None:intergenic | 30.0% |
! | TGCACAATCCATAATTTTCA+TGG | - | chr2_1:653152-653171 | None:intergenic | 30.0% |
AGATACAGAATTTACAATCC+AGG | + | chr2_1:653180-653199 | Msa0186010:intron | 30.0% | |
ATGAAGTTTGAATTCGTTGA+CGG | - | chr2_1:653280-653299 | None:intergenic | 30.0% | |
! | TCTCTTTTCTTCAATGTTCT+TGG | - | chr2_1:648771-648790 | None:intergenic | 30.0% |
TGTTGAAACACAGTACAAAA+AGG | - | chr2_1:649097-649116 | None:intergenic | 30.0% | |
! | TACTTGCTGACAAAGTTATA+GGG | - | chr2_1:654190-654209 | None:intergenic | 30.0% |
! | ATACTTGCTGACAAAGTTAT+AGG | - | chr2_1:654191-654210 | None:intergenic | 30.0% |
!!! | GTGCCTAAATGATTTTGATT+TGG | + | chr2_1:654488-654507 | Msa0186010:intron | 30.0% |
ACGCCAAATCAAAATCATTT+AGG | - | chr2_1:654494-654513 | None:intergenic | 30.0% | |
! | TTTCTCACTAGTACTAGTTT+AGG | + | chr2_1:654529-654548 | Msa0186010:intron | 30.0% |
! | TTCTCACTAGTACTAGTTTA+GGG | + | chr2_1:654530-654549 | Msa0186010:intron | 30.0% |
!!! | AAAGCTCCCTAAATGTTTTT+TGG | + | chr2_1:654573-654592 | Msa0186010:intron | 30.0% |
TAAAACTTCAGTTCTATTGG+TGG | + | chr2_1:654683-654702 | Msa0186010:intron | 30.0% | |
TCGACTTTGACTATCAATTA+TGG | + | chr2_1:654734-654753 | Msa0186010:intron | 30.0% | |
ACTTTGACTATCAATTATGG+AGG | + | chr2_1:654737-654756 | Msa0186010:intron | 30.0% | |
! | TTTGTTGTCCGACAATAATA+TGG | + | chr2_1:654989-655008 | Msa0186010:intron | 30.0% |
! | ACAATGGTACTCATAGATTT+TGG | - | chr2_1:655122-655141 | None:intergenic | 30.0% |
ACACACTAATATATAGGCAA+CGG | + | chr2_1:655287-655306 | Msa0186010:intron | 30.0% | |
!! | TTTTTGTGAAAATTCGGGTT+GGG | - | chr2_1:655346-655365 | None:intergenic | 30.0% |
! | ATTTTTGTGAAAATTCGGGT+TGG | - | chr2_1:655347-655366 | None:intergenic | 30.0% |
! | AGTTTAGTTTAGTTGGGTTT+CGG | + | chr2_1:655501-655520 | Msa0186010:intron | 30.0% |
! | GTATAGGTTTGCTTTGAATT+TGG | - | chr2_1:655533-655552 | None:intergenic | 30.0% |
AATGTATAGCTCTTCAATGA+AGG | - | chr2_1:655677-655696 | None:intergenic | 30.0% | |
TTGACTCATTCTTACATGAA+CGG | - | chr2_1:655756-655775 | None:intergenic | 30.0% | |
CAATCCAATCTCAAATACAT+GGG | + | chr2_1:655979-655998 | Msa0186010:intron | 30.0% | |
! | AATTCCCATGTATTTGAGAT+TGG | - | chr2_1:655986-656005 | None:intergenic | 30.0% |
AATCTCAAATACATGGGAAT+TGG | + | chr2_1:655985-656004 | Msa0186010:intron | 30.0% | |
! | TTTACATGTGAGTTTTCCAA+TGG | + | chr2_1:656398-656417 | Msa0186010:intron | 30.0% |
!! | TGAAGTATTGGTATCTGATA+CGG | - | chr2_1:656479-656498 | None:intergenic | 30.0% |
TATCAGATACCAATACTTCA+CGG | + | chr2_1:656479-656498 | Msa0186010:intron | 30.0% | |
! | TAAGTATCTTGGTGTATATG+TGG | - | chr2_1:656634-656653 | None:intergenic | 30.0% |
GACAATGATGTGAAATTCAA+TGG | + | chr2_1:656706-656725 | Msa0186010:intron | 30.0% | |
TTCTATAAAACAGTGGTTTC+TGG | + | chr2_1:657091-657110 | Msa0186010:intron | 30.0% | |
! | GTAATGAAATGGGAATGTTT+TGG | + | chr2_1:657127-657146 | Msa0186010:intron | 30.0% |
CTATTATATAGTTGCATGCA+TGG | + | chr2_1:657150-657169 | Msa0186010:intron | 30.0% | |
GGAATATACTTGAAATTCCA+AGG | + | chr2_1:657185-657204 | Msa0186010:intron | 30.0% | |
CGTACGTGAAATAAAATGAT+TGG | - | chr2_1:657275-657294 | None:intergenic | 30.0% | |
TGAAAGCGAAAGTTAATTGT+TGG | + | chr2_1:657295-657314 | Msa0186010:intron | 30.0% | |
AATAATAAAATGTTGGAGGG+GGG | + | chr2_1:657329-657348 | Msa0186010:intron | 30.0% | |
CTCATTCGGCATATAATAAT+TGG | + | chr2_1:657407-657426 | Msa0186010:intron | 30.0% | |
! | TTTTGTTGAATGTGTGTACA+TGG | - | chr2_1:657482-657501 | None:intergenic | 30.0% |
ATTGGAATTTGTATTACCGT+GGG | - | chr2_1:657918-657937 | None:intergenic | 30.0% | |
AATTGGAATTTGTATTACCG+TGG | - | chr2_1:657919-657938 | None:intergenic | 30.0% | |
GCATGTTGTGTGATATTAAT+TGG | - | chr2_1:657936-657955 | None:intergenic | 30.0% | |
! | ATCCTGACTGGAATAATTTT+TGG | + | chr2_1:658065-658084 | Msa0186010:intron | 30.0% |
! | ATAATTGGTTCATCAATCAG+AGG | + | chr2_1:658512-658531 | Msa0186010:CDS | 30.0% |
GAAAATCTCATATCTTCAGA+TGG | - | chr2_1:658553-658572 | None:intergenic | 30.0% | |
TCATGGATATGATATTAGCT+AGG | + | chr2_1:658695-658714 | Msa0186010:three_prime_UTR | 30.0% | |
ATATGATATTAGCTAGGCTT+CGG | + | chr2_1:658701-658720 | Msa0186010:three_prime_UTR | 30.0% | |
GAAAAATTAACATAGGGCAT+AGG | - | chr2_1:658758-658777 | None:intergenic | 30.0% | |
CGGTTCGAAAAATTAACATA+GGG | - | chr2_1:658764-658783 | None:intergenic | 30.0% | |
!! | CCTATGTTAATTTTTCGAAC+CGG | + | chr2_1:658762-658781 | Msa0186010:three_prime_UTR | 30.0% |
! | AATTTGAAGTTTCTTGCTAG+AGG | + | chr2_1:658952-658971 | Msa0186010:three_prime_UTR | 30.0% |
!!! | TTTTAGATGATGATTAGCCT+TGG | + | chr2_1:658982-659001 | Msa0186010:three_prime_UTR | 30.0% |
! | TTCTTTTCCAAGAAAACCTG+GGG | - | chr2_1:646894-646913 | None:intergenic | 35.0% |
ACAAACATAAGAAGTGGGAA+AGG | - | chr2_1:646977-646996 | None:intergenic | 35.0% | |
CAGTCAAACAAAAGGAGATT+AGG | - | chr2_1:647276-647295 | None:intergenic | 35.0% | |
TTGACTCAATGTTAACTGAC+AGG | - | chr2_1:647370-647389 | None:intergenic | 35.0% | |
GTAAAAGGACATTCAACTTG+TGG | - | chr2_1:647423-647442 | None:intergenic | 35.0% | |
! | AGTTGAATGTCCTTTTACAG+TGG | + | chr2_1:647425-647444 | Msa0186010:intron | 35.0% |
! | GTTGAATGTCCTTTTACAGT+GGG | + | chr2_1:647426-647445 | Msa0186010:intron | 35.0% |
TCAATATGACCCACTGTAAA+AGG | - | chr2_1:647438-647457 | None:intergenic | 35.0% | |
TTTACAGTGGGTCATATTGA+TGG | + | chr2_1:647438-647457 | Msa0186010:intron | 35.0% | |
GTTTATTCTTATTCTGCTGC+TGG | + | chr2_1:647471-647490 | Msa0186010:five_prime_UTR | 35.0% | |
ACAACCAATCGGATCTAATA+AGG | + | chr2_1:647543-647562 | Msa0186010:CDS | 35.0% | |
TATATTGTGCATGAAGGTTG+GGG | + | chr2_1:647852-647871 | Msa0186010:intron | 35.0% | |
GCTTCTCTTCTTGAAGAAAT+AGG | + | chr2_1:647889-647908 | Msa0186010:CDS | 35.0% | |
!!! | TCTCACGGAAAGCATTATTT+TGG | - | chr2_1:647927-647946 | None:intergenic | 35.0% |
AATAATGCTTTCCGTGAGAT+AGG | + | chr2_1:647928-647947 | Msa0186010:CDS | 35.0% | |
AATATACCATGAAGTGGTCA+AGG | - | chr2_1:647966-647985 | None:intergenic | 35.0% | |
ACAACTAAACGAACTTTGCA+AGG | + | chr2_1:648231-648250 | Msa0186010:CDS | 35.0% | |
CAACTAAACGAACTTTGCAA+GGG | + | chr2_1:648232-648251 | Msa0186010:CDS | 35.0% | |
AACTAAACGAACTTTGCAAG+GGG | + | chr2_1:648233-648252 | Msa0186010:CDS | 35.0% | |
TTTACCTGAACGGTTGTAAT+CGG | - | chr2_1:648275-648294 | None:intergenic | 35.0% | |
AGTAGCAAATCTTTCCATTG+AGG | + | chr2_1:648542-648561 | Msa0186010:intron | 35.0% | |
TCCTTCGAATTTAAATGCCT+TGG | + | chr2_1:648624-648643 | Msa0186010:intron | 35.0% | |
CCTTCGAATTTAAATGCCTT+GGG | + | chr2_1:648625-648644 | Msa0186010:intron | 35.0% | |
GTGTATCAACCCTATTACAT+TGG | + | chr2_1:648898-648917 | Msa0186010:intron | 35.0% | |
TGTTAGGGTCCAATGTAATA+GGG | - | chr2_1:648910-648929 | None:intergenic | 35.0% | |
ATGTTAGGGTCCAATGTAAT+AGG | - | chr2_1:648911-648930 | None:intergenic | 35.0% | |
CCTAGTTTATAGGGATGTTA+GGG | - | chr2_1:648925-648944 | None:intergenic | 35.0% | |
TCCTAGTTTATAGGGATGTT+AGG | - | chr2_1:648926-648945 | None:intergenic | 35.0% | |
ATTATTGAATGATGAGCAGC+AGG | - | chr2_1:649063-649082 | None:intergenic | 35.0% | |
TTTATCATGGTCAAGCTTGT+GGG | - | chr2_1:649124-649143 | None:intergenic | 35.0% | |
ATTTATCATGGTCAAGCTTG+TGG | - | chr2_1:649125-649144 | None:intergenic | 35.0% | |
TTGATATAGGAAGAAGTCTG+AGG | + | chr2_1:649231-649250 | Msa0186010:intron | 35.0% | |
TTTGTCCTTTCATGGAAAAC+TGG | + | chr2_1:649305-649324 | Msa0186010:intron | 35.0% | |
TAGGTTCTTCACTCATATCT+TGG | - | chr2_1:649511-649530 | None:intergenic | 35.0% | |
! | ACTGGATTCTGCTTCTTTTT+AGG | - | chr2_1:649530-649549 | None:intergenic | 35.0% |
AGATACCTTAAGAACAATCC+TGG | - | chr2_1:649647-649666 | None:intergenic | 35.0% | |
GCTTTGTAATGTGTGATTGT+TGG | + | chr2_1:649683-649702 | Msa0186010:intron | 35.0% | |
TAGCAAGACACATCTTCAAA+AGG | + | chr2_1:649797-649816 | Msa0186010:intron | 35.0% | |
TTGGATTTACTCGATTCTTC+TGG | - | chr2_1:649893-649912 | None:intergenic | 35.0% | |
CTCTCAAAGGAAATATTGCT+TGG | - | chr2_1:649912-649931 | None:intergenic | 35.0% | |
GGGATCCTCAAATATTTCTT+AGG | - | chr2_1:649971-649990 | None:intergenic | 35.0% | |
GAATAAGGAGTAATCAGATG+TGG | + | chr2_1:650123-650142 | Msa0186010:intron | 35.0% | |
TGAAACAAGCAAGCAGAAAA+TGG | - | chr2_1:650195-650214 | None:intergenic | 35.0% | |
ATTCATGAGTATACCAGAAG+GGG | - | chr2_1:650269-650288 | None:intergenic | 35.0% | |
GTATTCATGAGTATACCAGA+AGG | - | chr2_1:650271-650290 | None:intergenic | 35.0% | |
CTATTGCCTCTATTCAAAAC+TGG | - | chr2_1:650351-650370 | None:intergenic | 35.0% | |
AATAGAGGCAATAGCAAGAA+GGG | + | chr2_1:650357-650376 | Msa0186010:intron | 35.0% | |
!! | AAGGGTTACAATCAAGTTGA+GGG | - | chr2_1:650436-650455 | None:intergenic | 35.0% |
! | TAAGGGTTACAATCAAGTTG+AGG | - | chr2_1:650437-650456 | None:intergenic | 35.0% |
TATACCCATTTACTGCCAAT+TGG | + | chr2_1:650514-650533 | Msa0186010:intron | 35.0% | |
!! | TTAAAGGCATTGACTGCTAA+TGG | - | chr2_1:650577-650596 | None:intergenic | 35.0% |
! | TCAGTCTGAACATTGGTTAA+AGG | - | chr2_1:650614-650633 | None:intergenic | 35.0% |
! | CATGCCTCTTTATAGGTTTT+AGG | + | chr2_1:650634-650653 | Msa0186010:intron | 35.0% |
TGAGCCTAAAACCTATAAAG+AGG | - | chr2_1:650641-650660 | None:intergenic | 35.0% | |
TCATCAAAATCAGTCAACTC+AGG | - | chr2_1:650751-650770 | None:intergenic | 35.0% | |
TGTAATCTTTCAAATAGCCC+GGG | + | chr2_1:650794-650813 | Msa0186010:intron | 35.0% | |
TTTATGTATAACAGGTGGTG+AGG | + | chr2_1:650837-650856 | Msa0186010:intron | 35.0% | |
TTATGTATAACAGGTGGTGA+GGG | + | chr2_1:650838-650857 | Msa0186010:intron | 35.0% | |
TATTCCCATGAGACATTTGA+AGG | + | chr2_1:651003-651022 | Msa0186010:intron | 35.0% | |
! | TTGATTGTTTAAAATGGGGC+TGG | + | chr2_1:651272-651291 | Msa0186010:intron | 35.0% |
! | TGATTGTTTAAAATGGGGCT+GGG | + | chr2_1:651273-651292 | Msa0186010:intron | 35.0% |
TGCAGTCTTCATCATGAATA+GGG | - | chr2_1:651301-651320 | None:intergenic | 35.0% | |
ATGCAGTCTTCATCATGAAT+AGG | - | chr2_1:651302-651321 | None:intergenic | 35.0% | |
! | CCCACTTACCTAAAACTTTT+TGG | - | chr2_1:651341-651360 | None:intergenic | 35.0% |
!! | CCTCAGTTTTATGCTTCTAA+AGG | - | chr2_1:651468-651487 | None:intergenic | 35.0% |
! | CCTTTAGAAGCATAAAACTG+AGG | + | chr2_1:651465-651484 | Msa0186010:intron | 35.0% |
AACTGAGGCATATTGAATTC+AGG | + | chr2_1:651480-651499 | Msa0186010:intron | 35.0% | |
ACTGAGGCATATTGAATTCA+GGG | + | chr2_1:651481-651500 | Msa0186010:intron | 35.0% | |
AAAAGGAAACTGAGACTGTA+AGG | + | chr2_1:651815-651834 | Msa0186010:intron | 35.0% | |
! | ACCTAGTCTAAAATGCCAAA+GGG | + | chr2_1:651863-651882 | Msa0186010:intron | 35.0% |
!! | GATTGGTTCTGGTGATAAAA+GGG | - | chr2_1:651976-651995 | None:intergenic | 35.0% |
!! | TGATTGGTTCTGGTGATAAA+AGG | - | chr2_1:651977-651996 | None:intergenic | 35.0% |
TCTTGTCCTGAATAAAACAC+TGG | + | chr2_1:652009-652028 | Msa0186010:intron | 35.0% | |
!! | TGGTTTCCAGTGTTTTATTC+AGG | - | chr2_1:652018-652037 | None:intergenic | 35.0% |
GCCATAGTTAAATGACCATT+AGG | + | chr2_1:652170-652189 | Msa0186010:intron | 35.0% | |
!! | AGTTCTTGGATCATTGATTC+AGG | - | chr2_1:652272-652291 | None:intergenic | 35.0% |
CAGAATTCATCTCTTAACCA+AGG | - | chr2_1:652413-652432 | None:intergenic | 35.0% | |
TATTGCTCATGTGTAATAGC+TGG | + | chr2_1:652455-652474 | Msa0186010:intron | 35.0% | |
TGCTAATCATATTGCAAAGG+AGG | - | chr2_1:652534-652553 | None:intergenic | 35.0% | |
! | ACGTACACCATGTTTAGAAT+TGG | + | chr2_1:652652-652671 | Msa0186010:intron | 35.0% |
CAAGGAACCAATTCTAAACA+TGG | - | chr2_1:652662-652681 | None:intergenic | 35.0% | |
!! | CTCTGAGTTGAAGATTTTGT+GGG | - | chr2_1:653002-653021 | None:intergenic | 35.0% |
!! | ACTCTGAGTTGAAGATTTTG+TGG | - | chr2_1:653003-653022 | None:intergenic | 35.0% |
TGGAAAATGCATGTGATGTT+TGG | - | chr2_1:653132-653151 | None:intergenic | 35.0% | |
GGATCAAAATCATCAGTGAT+AGG | + | chr2_1:653244-653263 | Msa0186010:intron | 35.0% | |
GAAGAAAGGACTAGATTGAT+CGG | + | chr2_1:653405-653424 | Msa0186010:intron | 35.0% | |
ATGTTCTTGGTTACTCAACA+TGG | - | chr2_1:648758-648777 | None:intergenic | 35.0% | |
GTGTATCAACCCTATTACAT+TGG | + | chr2_1:648898-648917 | Msa0186010:intron | 35.0% | |
TGTTAGGGTCCAATGTAATA+GGG | - | chr2_1:648910-648929 | None:intergenic | 35.0% | |
ATGTTAGGGTCCAATGTAAT+AGG | - | chr2_1:648911-648930 | None:intergenic | 35.0% | |
CCTAGTTTATAGGGATGTTA+GGG | - | chr2_1:648925-648944 | None:intergenic | 35.0% | |
TCCTAGTTTATAGGGATGTT+AGG | - | chr2_1:648926-648945 | None:intergenic | 35.0% | |
ATTATTGAATGATGAGCAGC+AGG | - | chr2_1:649063-649082 | None:intergenic | 35.0% | |
!! | AATCCTACTTTAGAGTCACT+TGG | - | chr2_1:653903-653922 | None:intergenic | 35.0% |
! | ACTTGCTGACAAAGTTATAG+GGG | - | chr2_1:654189-654208 | None:intergenic | 35.0% |
! | TTTTGGTACCCCTGAAAATA+TGG | + | chr2_1:654278-654297 | Msa0186010:intron | 35.0% |
AAGTGTATCTCATTTAGCTG+TGG | - | chr2_1:654341-654360 | None:intergenic | 35.0% | |
TTTAGGCTCACACACATAAA+AGG | + | chr2_1:654389-654408 | Msa0186010:intron | 35.0% | |
TTAGGCTCACACACATAAAA+GGG | + | chr2_1:654390-654409 | Msa0186010:intron | 35.0% | |
! | GGGAAAAGTATGAAATAGCA+AGG | + | chr2_1:654410-654429 | Msa0186010:intron | 35.0% |
! | CGTAACAACGTATTTTCTAG+AGG | + | chr2_1:654626-654645 | Msa0186010:intron | 35.0% |
!! | ACAACGTATTTTCTAGAGGA+AGG | + | chr2_1:654630-654649 | Msa0186010:intron | 35.0% |
ACTTACATGCTCTTTGTGAA+AGG | + | chr2_1:654659-654678 | Msa0186010:intron | 35.0% | |
CTTACATGCTCTTTGTGAAA+GGG | + | chr2_1:654660-654679 | Msa0186010:intron | 35.0% | |
GGGTAAAACTTCAGTTCTAT+TGG | + | chr2_1:654680-654699 | Msa0186010:intron | 35.0% | |
CTGTCTCGTAAACAGAAAAT+AGG | - | chr2_1:654769-654788 | None:intergenic | 35.0% | |
CTACACAGTATCTGAAAGAA+AGG | - | chr2_1:654817-654836 | None:intergenic | 35.0% | |
TCAGCCACACACTAATATAT+AGG | + | chr2_1:655281-655300 | Msa0186010:intron | 35.0% | |
GTTGCCTATATATTAGTGTG+TGG | - | chr2_1:655288-655307 | None:intergenic | 35.0% | |
CACACTAATATATAGGCAAC+GGG | + | chr2_1:655288-655307 | Msa0186010:intron | 35.0% | |
ACACTAATATATAGGCAACG+GGG | + | chr2_1:655289-655308 | Msa0186010:intron | 35.0% | |
!!! | TTTTGTGAAAATTCGGGTTG+GGG | - | chr2_1:655345-655364 | None:intergenic | 35.0% |
AAGAAATTGAATGTGGGTCT+CGG | - | chr2_1:655470-655489 | None:intergenic | 35.0% | |
AGACCCACATTCAATTTCTT+TGG | + | chr2_1:655470-655489 | Msa0186010:intron | 35.0% | |
! | GTTTAGTTTAGTTGGGTTTC+GGG | + | chr2_1:655502-655521 | Msa0186010:intron | 35.0% |
! | TTTAGTTTAGTTGGGTTTCG+GGG | + | chr2_1:655503-655522 | Msa0186010:intron | 35.0% |
! | GAAGGTTGACTTAATTGACA+AGG | - | chr2_1:655659-655678 | None:intergenic | 35.0% |
TGACTCATTCTTACATGAAC+GGG | - | chr2_1:655755-655774 | None:intergenic | 35.0% | |
! | ATAGTGGAGTTTCCCTTAAA+CGG | + | chr2_1:655807-655826 | Msa0186010:intron | 35.0% |
! | CCATGTATTTGAGATTGGAT+TGG | - | chr2_1:655981-656000 | None:intergenic | 35.0% |
CCAATCCAATCTCAAATACA+TGG | + | chr2_1:655978-655997 | Msa0186010:intron | 35.0% | |
!! | CCTAAGAGTACTTATGGAAT+GGG | - | chr2_1:656095-656114 | None:intergenic | 35.0% |
CCATTCCATAAGTACTCTTA+GGG | + | chr2_1:656093-656112 | Msa0186010:intron | 35.0% | |
AGTACTATGTATGAGATCCT+GGG | + | chr2_1:656230-656249 | Msa0186010:intron | 35.0% | |
GATGCATACACATAACACTA+GGG | - | chr2_1:656311-656330 | None:intergenic | 35.0% | |
TGATGCATACACATAACACT+AGG | - | chr2_1:656312-656331 | None:intergenic | 35.0% | |
GTCAGTTGAGTTAAGACTTA+TGG | - | chr2_1:656371-656390 | None:intergenic | 35.0% | |
GAAGAAACAACATTAGCCAT+TGG | - | chr2_1:656417-656436 | None:intergenic | 35.0% | |
!! | GAAGTATTGGTATCTGATAC+GGG | - | chr2_1:656478-656497 | None:intergenic | 35.0% |
GAAAAGAGTAATTCACTGCT+AGG | - | chr2_1:657020-657039 | None:intergenic | 35.0% | |
! | TTTTCTTCCTTTCCATGACA+AGG | + | chr2_1:657035-657054 | Msa0186010:intron | 35.0% |
TCCCTACTCAAGTAATGAAA+TGG | + | chr2_1:657116-657135 | Msa0186010:intron | 35.0% | |
CCCATTTCATTACTTGAGTA+GGG | - | chr2_1:657120-657139 | None:intergenic | 35.0% | |
CCCTACTCAAGTAATGAAAT+GGG | + | chr2_1:657117-657136 | Msa0186010:intron | 35.0% | |
TCCCATTTCATTACTTGAGT+AGG | - | chr2_1:657121-657140 | None:intergenic | 35.0% | |
ATAATAAAATGTTGGAGGGG+GGG | + | chr2_1:657330-657349 | Msa0186010:intron | 35.0% | |
TCGTGATCTAACCCAAAAAA+AGG | - | chr2_1:657645-657664 | None:intergenic | 35.0% | |
!!! | TTTTTTTGGGTTAGATCACG+AGG | + | chr2_1:657644-657663 | Msa0186010:intron | 35.0% |
TCTTTAAGCTCTTTATCACC+TGG | - | chr2_1:657756-657775 | None:intergenic | 35.0% | |
TTACCTTAGCAACTTAAGAC+AGG | + | chr2_1:657800-657819 | Msa0186010:CDS | 35.0% | |
! | ATTCCTGTCTTAAGTTGCTA+AGG | - | chr2_1:657806-657825 | None:intergenic | 35.0% |
GACAGGAATTTCTCAAGAAA+AGG | + | chr2_1:657817-657836 | Msa0186010:CDS | 35.0% | |
GAAAAAGGGTAAACTACCAA+AGG | + | chr2_1:657839-657858 | Msa0186010:CDS | 35.0% | |
! | AATGCTTTTCTTGCATCCTT+TGG | - | chr2_1:657858-657877 | None:intergenic | 35.0% |
!! | CAAGAAAAGCATTGATGGAT+TGG | + | chr2_1:657865-657884 | Msa0186010:CDS | 35.0% |
ATTTGTATTACCGTGGGATA+AGG | - | chr2_1:657912-657931 | None:intergenic | 35.0% | |
AATTTCCTCGAATCATTCGT+TGG | - | chr2_1:658036-658055 | None:intergenic | 35.0% | |
! | ATTTGAGTTCAAATCCTGAC+TGG | + | chr2_1:658053-658072 | Msa0186010:intron | 35.0% |
GACCAAAAATTATTCCAGTC+AGG | - | chr2_1:658070-658089 | None:intergenic | 35.0% | |
TTTAACTCTCAACTGAACTC+CGG | + | chr2_1:658098-658117 | Msa0186010:intron | 35.0% | |
TCCTTCATTTGGAAACAGAA+GGG | + | chr2_1:658133-658152 | Msa0186010:intron | 35.0% | |
! | TAACACCAACAAAATGGACT+AGG | - | chr2_1:658236-658255 | None:intergenic | 35.0% |
ACACTGTAACACCAACAAAA+TGG | - | chr2_1:658242-658261 | None:intergenic | 35.0% | |
! | GTACTAGAAAACTTTTGGCA+TGG | + | chr2_1:658268-658287 | Msa0186010:intron | 35.0% |
CAAATGCAAGTTAAGCTTGT+TGG | - | chr2_1:658313-658332 | None:intergenic | 35.0% | |
!! | GCTTAACTTGCATTTGCAAA+AGG | + | chr2_1:658317-658336 | Msa0186010:intron | 35.0% |
TGGAATTGACGTTGTTATCT+TGG | - | chr2_1:658355-658374 | None:intergenic | 35.0% | |
AGCAAAGAAGCTTGACAAAA+TGG | - | chr2_1:658375-658394 | None:intergenic | 35.0% | |
!!! | TTGATGAATTTTTCAGGAGG+AGG | + | chr2_1:658441-658460 | Msa0186010:intron | 35.0% |
CCTGCAGAATAAATTTACAG+AGG | - | chr2_1:658613-658632 | None:intergenic | 35.0% | |
CCTCTGTAAATTTATTCTGC+AGG | + | chr2_1:658610-658629 | Msa0186010:exon | 35.0% | |
CTGTAAATTTATTCTGCAGG+TGG | + | chr2_1:658613-658632 | Msa0186010:exon | 35.0% | |
TCCATGACATTCAAGCAAAA+GGG | - | chr2_1:658682-658701 | None:intergenic | 35.0% | |
ATCCATGACATTCAAGCAAA+AGG | - | chr2_1:658683-658702 | None:intergenic | 35.0% | |
! | CCGGTTCGAAAAATTAACAT+AGG | - | chr2_1:658765-658784 | None:intergenic | 35.0% |
!! | ATGATGATTAGCCTTGGATT+TGG | + | chr2_1:658988-659007 | Msa0186010:three_prime_UTR | 35.0% |
!! | AATAAGGTCTGGTCTTTTCC+AGG | + | chr2_1:646921-646940 | Msa0186010:five_prime_UTR | 40.0% |
AAAGGAAAGAGTGGAAAGCT+GGG | - | chr2_1:646959-646978 | None:intergenic | 40.0% | |
CTGGTAAGCAGTCAAACAAA+AGG | - | chr2_1:647284-647303 | None:intergenic | 40.0% | |
ATTGGTTGTGTTCCATGTGA+AGG | - | chr2_1:647532-647551 | None:intergenic | 40.0% | |
TCACATGGAACACAACCAAT+CGG | + | chr2_1:647532-647551 | Msa0186010:exon | 40.0% | |
CCAACCTTATTAGATCCGAT+TGG | - | chr2_1:647550-647569 | None:intergenic | 40.0% | |
CCAATCGGATCTAATAAGGT+TGG | + | chr2_1:647547-647566 | Msa0186010:CDS | 40.0% | |
AGAAGAGAAGCAAGTTCTGT+TGG | - | chr2_1:647880-647899 | None:intergenic | 40.0% | |
!!! | CACGGAAAGCATTATTTTGG+TGG | - | chr2_1:647924-647943 | None:intergenic | 40.0% |
GAAAAAGTCCTGAACATGAG+TGG | + | chr2_1:648406-648425 | Msa0186010:intron | 40.0% | |
GTTCTTTAACTGCTAGTAGC+AGG | + | chr2_1:648504-648523 | Msa0186010:intron | 40.0% | |
TGCTAACTTAAGAGGACAGA+TGG | - | chr2_1:648580-648599 | None:intergenic | 40.0% | |
ACTAGCAGTGCTAACTTAAG+AGG | - | chr2_1:648588-648607 | None:intergenic | 40.0% | |
TGCTAGTAATGAGATCAAGC+TGG | + | chr2_1:648601-648620 | Msa0186010:intron | 40.0% | |
! | CCCAAGGCATTTAAATTCGA+AGG | - | chr2_1:648628-648647 | None:intergenic | 40.0% |
CCCTAACATCCCTATAAACT+AGG | + | chr2_1:648922-648941 | Msa0186010:intron | 40.0% | |
ACTTGCAGTGCAAGTAACTA+AGG | + | chr2_1:648993-649012 | Msa0186010:intron | 40.0% | |
!! | TTGAACTTTGGAGGTGCTAA+AGG | + | chr2_1:649176-649195 | Msa0186010:intron | 40.0% |
! | CCATGAAAGGACAAAGCATT+TGG | - | chr2_1:649300-649319 | None:intergenic | 40.0% |
CCAAATGCTTTGTCCTTTCA+TGG | + | chr2_1:649297-649316 | Msa0186010:intron | 40.0% | |
! | CCAATCCAGTTTTCCATGAA+AGG | - | chr2_1:649313-649332 | None:intergenic | 40.0% |
CCTTTCATGGAAAACTGGAT+TGG | + | chr2_1:649310-649329 | Msa0186010:intron | 40.0% | |
TGACTGTCACAATACATGAC+TGG | + | chr2_1:649353-649372 | Msa0186010:intron | 40.0% | |
TTCAGAGGAAGATCTGGAAA+TGG | + | chr2_1:649466-649485 | Msa0186010:intron | 40.0% | |
GAATCCAGTTGTTGATCTTC+TGG | + | chr2_1:649541-649560 | Msa0186010:intron | 40.0% | |
GATTCCAGAAGATCAACAAC+TGG | - | chr2_1:649548-649567 | None:intergenic | 40.0% | |
AGTTCAGAGAAGCAACTACT+GGG | - | chr2_1:649602-649621 | None:intergenic | 40.0% | |
AAGTTCAGAGAAGCAACTAC+TGG | - | chr2_1:649603-649622 | None:intergenic | 40.0% | |
AGTTGCTTCTCTGAACTTCT+AGG | + | chr2_1:649605-649624 | Msa0186010:intron | 40.0% | |
GTTGCTTCTCTGAACTTCTA+GGG | + | chr2_1:649606-649625 | Msa0186010:intron | 40.0% | |
CTTAAGAACAATCCTGGTCT+TGG | - | chr2_1:649641-649660 | None:intergenic | 40.0% | |
CAAGACCAGGATTGTTCTTA+AGG | + | chr2_1:649639-649658 | Msa0186010:intron | 40.0% | |
TTGTTGGGGAATTCAGAAAC+TGG | + | chr2_1:649699-649718 | Msa0186010:intron | 40.0% | |
TGTGTAGCTAAAGAGATGTC+AGG | + | chr2_1:649731-649750 | Msa0186010:intron | 40.0% | |
TTGAAGATGTGTCTTGCTAC+AGG | - | chr2_1:649796-649815 | None:intergenic | 40.0% | |
!! | GTATCTAAAGGTGTTGATGC+AGG | + | chr2_1:649851-649870 | Msa0186010:intron | 40.0% |
!! | CTCGATTCTTCTGGTCTTTT+AGG | - | chr2_1:649884-649903 | None:intergenic | 40.0% |
!! | GTTGATGACATCATATTGGC+TGG | - | chr2_1:650061-650080 | None:intergenic | 40.0% |
! | ACTGCTTTGTTGCTTCATGA+AGG | - | chr2_1:650160-650179 | None:intergenic | 40.0% |
! | TCTTCATGGTGATTTGCAAG+AGG | - | chr2_1:650296-650315 | None:intergenic | 40.0% |
GAATAGAGGCAATAGCAAGA+AGG | + | chr2_1:650356-650375 | Msa0186010:intron | 40.0% | |
! | AAAGCCAGATTGGTAGCTAA+GGG | - | chr2_1:650454-650473 | None:intergenic | 40.0% |
! | TGAAAGGTACAAAGCCAGAT+TGG | - | chr2_1:650464-650483 | None:intergenic | 40.0% |
AGAGTGAAACATAAGGCAGA+TGG | - | chr2_1:650493-650512 | None:intergenic | 40.0% | |
GAAGCCAATTGGCAGTAAAT+GGG | - | chr2_1:650521-650540 | None:intergenic | 40.0% | |
TGAAGCCAATTGGCAGTAAA+TGG | - | chr2_1:650522-650541 | None:intergenic | 40.0% | |
ATTGGGTGGTAAATCCACAA+TGG | + | chr2_1:650543-650562 | Msa0186010:intron | 40.0% | |
AGACTGACATGCCTCTTTAT+AGG | + | chr2_1:650627-650646 | Msa0186010:intron | 40.0% | |
GTAATCTTTCAAATAGCCCG+GGG | + | chr2_1:650795-650814 | Msa0186010:intron | 40.0% | |
! | AGTGGAAGATGATGGTTCAT+TGG | + | chr2_1:650882-650901 | Msa0186010:intron | 40.0% |
GAAGGAGGAGTTTCAATAAC+AGG | + | chr2_1:650946-650965 | Msa0186010:intron | 40.0% | |
AGCTTATGCATCAACTCTTC+AGG | - | chr2_1:651187-651206 | None:intergenic | 40.0% | |
! | TTTCCACCCTTGCATTTTGT+TGG | + | chr2_1:651409-651428 | Msa0186010:intron | 40.0% |
! | TTCCACCCTTGCATTTTGTT+GGG | + | chr2_1:651410-651429 | Msa0186010:intron | 40.0% |
AACACCCCAACAAAATGCAA+GGG | - | chr2_1:651418-651437 | None:intergenic | 40.0% | |
AAACACCCCAACAAAATGCA+AGG | - | chr2_1:651419-651438 | None:intergenic | 40.0% | |
!! | TGTGTCACTTTGCTAAACAC+AGG | - | chr2_1:651764-651783 | None:intergenic | 40.0% |
! | GACCTAGTCTAAAATGCCAA+AGG | + | chr2_1:651862-651881 | Msa0186010:intron | 40.0% |
TATCTGGTAAAGGAGCAAAG+TGG | + | chr2_1:651889-651908 | Msa0186010:intron | 40.0% | |
ATCTGGTAAAGGAGCAAAGT+GGG | + | chr2_1:651890-651909 | Msa0186010:intron | 40.0% | |
ACCAGAACCAATCATCTTCT+TGG | + | chr2_1:651983-652002 | Msa0186010:intron | 40.0% | |
! | ACCAAGAAGATGATTGGTTC+TGG | - | chr2_1:651987-652006 | None:intergenic | 40.0% |
GTTTCTTCTTCCATGTCTCT+TGG | - | chr2_1:652362-652381 | None:intergenic | 40.0% | |
AACTGCACATGCTTCTAATC+AGG | - | chr2_1:652384-652403 | None:intergenic | 40.0% | |
! | CATGTGCAGTTTTTGAACCT+TGG | + | chr2_1:652393-652412 | Msa0186010:intron | 40.0% |
TTGCTATCACCACATGATGA+AGG | + | chr2_1:652488-652507 | Msa0186010:intron | 40.0% | |
! | CCTCACCTTCAAAAGACTTT+TGG | - | chr2_1:652566-652585 | None:intergenic | 40.0% |
!! | CCAAAAGTCTTTTGAAGGTG+AGG | + | chr2_1:652563-652582 | Msa0186010:intron | 40.0% |
!! | AAAGTCTTTTGAAGGTGAGG+TGG | + | chr2_1:652566-652585 | Msa0186010:intron | 40.0% |
!! | GAAACTTGTTGGCAGAAACA+TGG | - | chr2_1:652596-652615 | None:intergenic | 40.0% |
ATCACACTGTGGAAACTTGT+TGG | - | chr2_1:652607-652626 | None:intergenic | 40.0% | |
TGGTAGAAAGAATCACACTG+TGG | - | chr2_1:652618-652637 | None:intergenic | 40.0% | |
!! | GTACGTGTGTGTACTTTTTG+TGG | - | chr2_1:652638-652657 | None:intergenic | 40.0% |
TCTGGCAAATCACAATCTCA+AGG | - | chr2_1:652680-652699 | None:intergenic | 40.0% | |
AAGTACAAGGGAGATTCTTC+TGG | - | chr2_1:652698-652717 | None:intergenic | 40.0% | |
AGAATCTCCCTTGTACTTTC+TGG | + | chr2_1:652700-652719 | Msa0186010:intron | 40.0% | |
! | GCTGATTCCAGAAAGTACAA+GGG | - | chr2_1:652710-652729 | None:intergenic | 40.0% |
!! | TGCTGATTCCAGAAAGTACA+AGG | - | chr2_1:652711-652730 | None:intergenic | 40.0% |
!! | TGAGTTGAAGATTTTGTGGG+AGG | - | chr2_1:652999-653018 | None:intergenic | 40.0% |
GTAAAAGGCAGTTACAGACT+TGG | + | chr2_1:653021-653040 | Msa0186010:intron | 40.0% | |
AAGTTGTTGCAACGATTCCA+AGG | + | chr2_1:653211-653230 | Msa0186010:intron | 40.0% | |
CGGTTCAAACTATCATTCCT+GGG | - | chr2_1:653335-653354 | None:intergenic | 40.0% | |
ACGGTTCAAACTATCATTCC+TGG | - | chr2_1:653336-653355 | None:intergenic | 40.0% | |
TAGTTTGAACCGTCCAAAAC+TGG | + | chr2_1:653343-653362 | Msa0186010:intron | 40.0% | |
!!! | ACTGTTTCTCCAGTTTTGGA+CGG | - | chr2_1:653355-653374 | None:intergenic | 40.0% |
!! | TGTCACTGTTTCTCCAGTTT+TGG | - | chr2_1:653359-653378 | None:intergenic | 40.0% |
TTCTTCGTTCATCCTAGTGA+TGG | - | chr2_1:653391-653410 | None:intergenic | 40.0% | |
TCACTAGGATGAACGAAGAA+AGG | + | chr2_1:653391-653410 | Msa0186010:intron | 40.0% | |
CCCTAACATCCCTATAAACT+AGG | + | chr2_1:648922-648941 | Msa0186010:intron | 40.0% | |
ACTTGCAGTGCAAGTAACTA+AGG | + | chr2_1:648993-649012 | Msa0186010:intron | 40.0% | |
!! | GAACCAAGTGACTCTAAAGT+AGG | + | chr2_1:653897-653916 | Msa0186010:intron | 40.0% |
CTTGATCCAAAGTCTACACT+CGG | + | chr2_1:653923-653942 | Msa0186010:intron | 40.0% | |
TAATTGCAGTGCCTCAATTG+TGG | - | chr2_1:654069-654088 | None:intergenic | 40.0% | |
!! | ACGTATTTTCTAGAGGAAGG+AGG | + | chr2_1:654633-654652 | Msa0186010:intron | 40.0% |
TATATTAGTGTGTGGCTGAG+TGG | - | chr2_1:655280-655299 | None:intergenic | 40.0% | |
TAATATATAGGCAACGGGGT+GGG | + | chr2_1:655293-655312 | Msa0186010:intron | 40.0% | |
!! | TTTGTGAAAATTCGGGTTGG+GGG | - | chr2_1:655344-655363 | None:intergenic | 40.0% |
TTTCAAACCCGGCAAAGTTT+GGG | - | chr2_1:655382-655401 | None:intergenic | 40.0% | |
! | TTTTCAAACCCGGCAAAGTT+TGG | - | chr2_1:655383-655402 | None:intergenic | 40.0% |
!! | TGCGTGCTTATTTTCAAACC+CGG | - | chr2_1:655393-655412 | None:intergenic | 40.0% |
! | CGGAATTTTCTTGATAGGAG+CGG | - | chr2_1:655450-655469 | None:intergenic | 40.0% |
! | GGTCTCGGAATTTTCTTGAT+AGG | - | chr2_1:655455-655474 | None:intergenic | 40.0% |
CATTCTTACATGAACGGGTA+AGG | - | chr2_1:655750-655769 | None:intergenic | 40.0% | |
! | TTAACTTGGCCACATCATAG+TGG | + | chr2_1:655791-655810 | Msa0186010:intron | 40.0% |
TAGTGGAGTTTCCCTTAAAC+GGG | + | chr2_1:655808-655827 | Msa0186010:intron | 40.0% | |
! | ATCATAGAAAGCGCATGTCT+TGG | - | chr2_1:655932-655951 | None:intergenic | 40.0% |
CCCATTCCATAAGTACTCTT+AGG | + | chr2_1:656092-656111 | Msa0186010:intron | 40.0% | |
!! | CCCTAAGAGTACTTATGGAA+TGG | - | chr2_1:656096-656115 | None:intergenic | 40.0% |
TTCCATAAGTACTCTTAGGG+AGG | + | chr2_1:656096-656115 | Msa0186010:intron | 40.0% | |
!! | ATCCTCCCTAAGAGTACTTA+TGG | - | chr2_1:656101-656120 | None:intergenic | 40.0% |
AGACCATAAGCCACTGAAAT+TGG | + | chr2_1:656188-656207 | Msa0186010:intron | 40.0% | |
GAGTACTATGTATGAGATCC+TGG | + | chr2_1:656229-656248 | Msa0186010:intron | 40.0% | |
TTCTTCTATCCTATGAAGCC+CGG | + | chr2_1:656431-656450 | Msa0186010:intron | 40.0% | |
CAATACTTCACGGATACTCT+CGG | + | chr2_1:656489-656508 | Msa0186010:intron | 40.0% | |
!! | TGAAGTATCGGTATCCGATA+CGG | - | chr2_1:656523-656542 | None:intergenic | 40.0% |
TATCGGATACCGATACTTCA+CGG | + | chr2_1:656523-656542 | Msa0186010:intron | 40.0% | |
TATGATACGACACAGGTACA+CGG | - | chr2_1:656900-656919 | None:intergenic | 40.0% | |
TAGATAGAAGCTATGAAGCC+CGG | - | chr2_1:656941-656960 | None:intergenic | 40.0% | |
! | GATATAATGCAGCCTTGTCA+TGG | - | chr2_1:657050-657069 | None:intergenic | 40.0% |
! | CATGCATGGTGAGAATGTTT+TGG | + | chr2_1:657164-657183 | Msa0186010:intron | 40.0% |
CGTACATACCATGAAAGAGA+TGG | + | chr2_1:657247-657266 | Msa0186010:intron | 40.0% | |
! | AAGTATAGGGCTGACTCATT+CGG | + | chr2_1:657393-657412 | Msa0186010:intron | 40.0% |
TCAGAGGATGAAATGAGTTG+TGG | + | chr2_1:657678-657697 | Msa0186010:CDS | 40.0% | |
GGATGAAATGAGTTGTGGAA+AGG | + | chr2_1:657683-657702 | Msa0186010:CDS | 40.0% | |
GAAATGCTCCTTCGTAAGTA+CGG | + | chr2_1:657774-657793 | Msa0186010:CDS | 40.0% | |
AAATGCTCCTTCGTAAGTAC+GGG | + | chr2_1:657775-657794 | Msa0186010:CDS | 40.0% | |
!! | GGATGCAAGAAAAGCATTGA+TGG | + | chr2_1:657860-657879 | Msa0186010:CDS | 40.0% |
!! | GAAAAGCATTGATGGATTGG+TGG | + | chr2_1:657868-657887 | Msa0186010:CDS | 40.0% |
TTTGTCCAACGAATGATTCG+AGG | + | chr2_1:658028-658047 | Msa0186010:intron | 40.0% | |
TTTCCAAATGAAGGAGACTC+CGG | - | chr2_1:658128-658147 | None:intergenic | 40.0% | |
CTCCTTCATTTGGAAACAGA+AGG | + | chr2_1:658132-658151 | Msa0186010:intron | 40.0% | |
ACCCTTCTGTTTCCAAATGA+AGG | - | chr2_1:658137-658156 | None:intergenic | 40.0% | |
! | AGGTTCCTAGTCCATTTTGT+TGG | + | chr2_1:658228-658247 | Msa0186010:intron | 40.0% |
! | AGAAAACTTTTGGCATGGTG+AGG | + | chr2_1:658273-658292 | Msa0186010:intron | 40.0% |
TCAATCAGAGGAAAAGACAC+TGG | + | chr2_1:658524-658543 | Msa0186010:CDS | 40.0% | |
CTTCTTTCGCAGATTAAGAC+AGG | - | chr2_1:658655-658674 | None:intergenic | 40.0% | |
! | ACCCTTTTGCTTGAATGTCA+TGG | + | chr2_1:658678-658697 | Msa0186010:three_prime_UTR | 40.0% |
!! | TCTGGATTGGACTTTTGAGA+TGG | - | chr2_1:658727-658746 | None:intergenic | 40.0% |
! | ATAGGCGTATTGTTCTGGAT+TGG | - | chr2_1:658740-658759 | None:intergenic | 40.0% |
! | TCCTTTTCCCCAGGTTTTCT+TGG | + | chr2_1:646884-646903 | Msa0186010:five_prime_UTR | 45.0% |
TCCAAGAAAACCTGGGGAAA+AGG | - | chr2_1:646888-646907 | None:intergenic | 45.0% | |
GAAAGGAAAGAGTGGAAAGC+TGG | - | chr2_1:646960-646979 | None:intergenic | 45.0% | |
AGAAGTGGGAAAGGAAAGAG+TGG | - | chr2_1:646968-646987 | None:intergenic | 45.0% | |
GTTTCTTCTCTAGCTAGCTG+AGG | + | chr2_1:646995-647014 | Msa0186010:intron | 45.0% | |
! | AGTGGGTCATATTGATGGCA+AGG | + | chr2_1:647443-647462 | Msa0186010:intron | 45.0% |
CAGGATCATCTCCTATCTCA+CGG | - | chr2_1:647942-647961 | None:intergenic | 45.0% | |
! | TGTTGCTTCATTGAAGGGCT+TGG | - | chr2_1:648188-648207 | None:intergenic | 45.0% |
TCATCCGATTACAACCGTTC+AGG | + | chr2_1:648268-648287 | Msa0186010:CDS | 45.0% | |
! | TAAGGTGTAGTGTTAGCCTG+TGG | + | chr2_1:649011-649030 | Msa0186010:intron | 45.0% |
TCCTCAATTACTTGTGCCAC+AGG | - | chr2_1:649030-649049 | None:intergenic | 45.0% | |
! | GTGGCTGCTCTACCTTTTAA+AGG | - | chr2_1:649405-649424 | None:intergenic | 45.0% |
TGTCAGGTCTAGTAGTGTTC+AGG | + | chr2_1:649747-649766 | Msa0186010:intron | 45.0% | |
AAGATGTGTCTTGCTACAGG+AGG | - | chr2_1:649793-649812 | None:intergenic | 45.0% | |
!! | TAAAGGTGTTGATGCAGGCT+TGG | + | chr2_1:649856-649875 | Msa0186010:intron | 45.0% |
CAGGCATTTCAGTCTCTCAA+AGG | - | chr2_1:649925-649944 | None:intergenic | 45.0% | |
!! | GAAGTTGCTCACTCTAAAGC+AGG | - | chr2_1:649944-649963 | None:intergenic | 45.0% |
ACTGTAGTGAGCTTAGCAAC+AGG | + | chr2_1:650385-650404 | Msa0186010:intron | 45.0% | |
!! | TTACAATCAAGTTGAGGGCC+TGG | - | chr2_1:650431-650450 | None:intergenic | 45.0% |
GTAACCCTTAGCTACCAATC+TGG | + | chr2_1:650447-650466 | Msa0186010:intron | 45.0% | |
! | CAAAGCCAGATTGGTAGCTA+AGG | - | chr2_1:650455-650474 | None:intergenic | 45.0% |
! | AGGCAGATGGCTCTATTGAA+AGG | - | chr2_1:650480-650499 | None:intergenic | 45.0% |
! | ACTGCCAATTGGCTTCACAT+TGG | + | chr2_1:650525-650544 | Msa0186010:intron | 45.0% |
! | CTGCCAATTGGCTTCACATT+GGG | + | chr2_1:650526-650545 | Msa0186010:intron | 45.0% |
TGGTAAATCCACAATGGACC+AGG | + | chr2_1:650549-650568 | Msa0186010:intron | 45.0% | |
TAATGGTACCTGGTCCATTG+TGG | - | chr2_1:650560-650579 | None:intergenic | 45.0% | |
! | CATTGACTGCTAATGGTACC+TGG | - | chr2_1:650570-650589 | None:intergenic | 45.0% |
AGGCATGTCAGTCTGAACAT+TGG | - | chr2_1:650621-650640 | None:intergenic | 45.0% | |
TACAAGAGTCAAATCTGCCC+CGG | - | chr2_1:650815-650834 | None:intergenic | 45.0% | |
! | GGAAGATGATGGTTCATTGG+TGG | + | chr2_1:650885-650904 | Msa0186010:intron | 45.0% |
TCTGACACAGTTTCAGAAGG+AGG | + | chr2_1:650931-650950 | Msa0186010:intron | 45.0% | |
! | TCCACCCTTGCATTTTGTTG+GGG | + | chr2_1:651411-651430 | Msa0186010:intron | 45.0% |
! | GCCCTTTGGCATTTTAGACT+AGG | - | chr2_1:651867-651886 | None:intergenic | 45.0% |
!! | AAATGCCAAAGGGCACTATC+TGG | + | chr2_1:651873-651892 | Msa0186010:intron | 45.0% |
CTTTACCAGATAGTGCCCTT+TGG | - | chr2_1:651881-651900 | None:intergenic | 45.0% | |
!! | CAAAGGGCACTATCTGGTAA+AGG | + | chr2_1:651879-651898 | Msa0186010:intron | 45.0% |
TCTGGTAAAGGAGCAAAGTG+GGG | + | chr2_1:651891-651910 | Msa0186010:intron | 45.0% | |
!! | TGGTTCTGGTGATAAAAGGG+AGG | - | chr2_1:651973-651992 | None:intergenic | 45.0% |
GGAGCTAGTGATCACATTTG+TGG | - | chr2_1:652251-652270 | None:intergenic | 45.0% | |
TTGGTCATTCACCAACTGAC+AGG | - | chr2_1:652343-652362 | None:intergenic | 45.0% | |
TGGTGAATGACCAAGAGACA+TGG | + | chr2_1:652349-652368 | Msa0186010:intron | 45.0% | |
GATGAGAAGCCTTCATCATG+TGG | - | chr2_1:652500-652519 | None:intergenic | 45.0% | |
CAAACTGTGTGTGCAGAGTA+CGG | - | chr2_1:652952-652971 | None:intergenic | 45.0% | |
GCAACAACTTAGTGCATTCC+TGG | - | chr2_1:653201-653220 | None:intergenic | 45.0% | |
TTGATCCTCTGTTTCGACCT+TGG | - | chr2_1:653231-653250 | None:intergenic | 45.0% | |
!! | TCAATGCGAAGAGCTTTAGG+AGG | - | chr2_1:653307-653326 | None:intergenic | 45.0% |
CGATCAATGCGAAGAGCTTT+AGG | - | chr2_1:653310-653329 | None:intergenic | 45.0% | |
GGAGAAACAGTGACAGATGA+AGG | + | chr2_1:653364-653383 | Msa0186010:intron | 45.0% | |
ACAGATGAAGGTCCATCACT+AGG | + | chr2_1:653376-653395 | Msa0186010:intron | 45.0% | |
GTGAGAACATCGTTGTTACG+AGG | + | chr2_1:653427-653446 | Msa0186010:intron | 45.0% | |
GCTTTCTCAAGCTCCATCAA+TGG | - | chr2_1:653455-653474 | None:intergenic | 45.0% | |
ATGGAGCTTGAGAAAGCTTG+CGG | + | chr2_1:653458-653477 | Msa0186010:intron | 45.0% | |
CTTGCGGAAGACGAATCAAA+AGG | + | chr2_1:653474-653493 | Msa0186010:intron | 45.0% | |
! | TAAGGTGTAGTGTTAGCCTG+TGG | + | chr2_1:649011-649030 | Msa0186010:intron | 45.0% |
TCCTCAATTACTTGTGCCAC+AGG | - | chr2_1:649030-649049 | None:intergenic | 45.0% | |
!! | TCCAGGGCACCATATTTTCA+GGG | - | chr2_1:654290-654309 | None:intergenic | 45.0% |
TCGGTACACTTTGTACGAGA+TGG | + | chr2_1:654863-654882 | Msa0186010:intron | 45.0% | |
AGTGGAATACGAGAGACACT+CGG | - | chr2_1:655262-655281 | None:intergenic | 45.0% | |
CTAATATATAGGCAACGGGG+TGG | + | chr2_1:655292-655311 | Msa0186010:intron | 45.0% | |
CATTTGTCCCCAAACTTTGC+CGG | + | chr2_1:655371-655390 | Msa0186010:intron | 45.0% | |
ATTTGTCCCCAAACTTTGCC+GGG | + | chr2_1:655372-655391 | Msa0186010:intron | 45.0% | |
TTCAAACCCGGCAAAGTTTG+GGG | - | chr2_1:655381-655400 | None:intergenic | 45.0% | |
GTACATATCACCCACCAAAG+AGG | + | chr2_1:655581-655600 | Msa0186010:intron | 45.0% | |
AGTCCTACCCACAACTTTGT+GGG | + | chr2_1:655623-655642 | Msa0186010:intron | 45.0% | |
TGACTCACCCACAAAGTTGT+GGG | - | chr2_1:655633-655652 | None:intergenic | 45.0% | |
TTGACTCACCCACAAAGTTG+TGG | - | chr2_1:655634-655653 | None:intergenic | 45.0% | |
TTACATGAACGGGTAAGGTG+AGG | - | chr2_1:655745-655764 | None:intergenic | 45.0% | |
AGGGAAACTCCACTATGATG+TGG | - | chr2_1:655803-655822 | None:intergenic | 45.0% | |
AGTGGAGTTTCCCTTAAACG+GGG | + | chr2_1:655809-655828 | Msa0186010:intron | 45.0% | |
GGACCAATTTCAGTGGCTTA+TGG | - | chr2_1:656194-656213 | None:intergenic | 45.0% | |
AGCCACTGAAATTGGTCCAA+TGG | + | chr2_1:656196-656215 | Msa0186010:intron | 45.0% | |
CACCATTGGACCAATTTCAG+TGG | - | chr2_1:656201-656220 | None:intergenic | 45.0% | |
CTGAAATTGGTCCAATGGTG+AGG | + | chr2_1:656201-656220 | Msa0186010:intron | 45.0% | |
GTACTCAAACTCCTCACCAT+TGG | - | chr2_1:656215-656234 | None:intergenic | 45.0% | |
!! | CGAGAGTATCCGTGAAGTAT+TGG | - | chr2_1:656491-656510 | None:intergenic | 45.0% |
!! | GAAGTATCGGTATCCGATAC+GGG | - | chr2_1:656522-656541 | None:intergenic | 45.0% |
!! | CGAGAGTATCCGTGAAGTAT+CGG | - | chr2_1:656491-656510 | None:intergenic | 45.0% |
CGATACTTCACGGATACTCT+CGG | + | chr2_1:656533-656552 | Msa0186010:intron | 45.0% | |
ACCCGCACTCATATAGTATC+CGG | + | chr2_1:656919-656938 | Msa0186010:intron | 45.0% | |
! | AATGCAGCCTTGTCATGGAA+AGG | - | chr2_1:657045-657064 | None:intergenic | 45.0% |
GATTGGGACCATCTCTTTCA+TGG | - | chr2_1:657258-657277 | None:intergenic | 45.0% | |
GGAAAGGTTGAAGCAGTAGA+AGG | + | chr2_1:657699-657718 | Msa0186010:CDS | 45.0% | |
AAGGTTGAAGCAGTAGAAGG+TGG | + | chr2_1:657702-657721 | Msa0186010:CDS | 45.0% | |
GGTGGTCATGATGAACTTTG+TGG | + | chr2_1:657720-657739 | Msa0186010:CDS | 45.0% | |
AATGCTCCTTCGTAAGTACG+GGG | + | chr2_1:657776-657795 | Msa0186010:CDS | 45.0% | |
ATTGGTGGAACGTCCACTAT+AGG | + | chr2_1:657883-657902 | Msa0186010:CDS | 45.0% | |
TCAACTGAACTCCGGATTAC+CGG | + | chr2_1:658106-658125 | Msa0186010:intron | 45.0% | |
TTACCGGAGTCTCCTTCATT+TGG | + | chr2_1:658122-658141 | Msa0186010:intron | 45.0% | |
ACAGACCTACTCAGTGACAT+AGG | - | chr2_1:658790-658809 | None:intergenic | 45.0% | |
! | AAGTTTCTTGCTAGAGGTGC+AGG | + | chr2_1:658958-658977 | Msa0186010:three_prime_UTR | 45.0% |
!! | TATATTATTGTTTAAATTAT+TGG | + | chr2_1:647211-647230 | Msa0186010:intron | 5.0% |
!!! | ATTTAAAAAATTTGTTAATT+TGG | + | chr2_1:652055-652074 | Msa0186010:intron | 5.0% |
!!! | TTTTATTAAATATTTTATAG+TGG | - | chr2_1:654033-654052 | None:intergenic | 5.0% |
AGGCACACACTCTCACAACA+AGG | - | chr2_1:646855-646874 | None:intergenic | 50.0% | |
GGGGAAAAGGAAAGAGAGGA+AGG | - | chr2_1:646875-646894 | None:intergenic | 50.0% | |
! | TCCTCTCTTTCCTTTTCCCC+AGG | + | chr2_1:646875-646894 | Msa0186010:five_prime_UTR | 50.0% |
ACCTGGGGAAAAGGAAAGAG+AGG | - | chr2_1:646879-646898 | None:intergenic | 50.0% | |
GAAAGAGTGGAAAGCTGGGT+TGG | - | chr2_1:646955-646974 | None:intergenic | 50.0% | |
TACAGCATCAAGACCCGTGT+AGG | - | chr2_1:647111-647130 | None:intergenic | 50.0% | |
TCTGCTGCTGGATTGCATCT+AGG | + | chr2_1:647483-647502 | Msa0186010:five_prime_UTR | 50.0% | |
AAAGAGGGTGAGTTGCGATC+TGG | - | chr2_1:647598-647617 | None:intergenic | 50.0% | |
TCCTGACCTTGACCACTTCA+TGG | + | chr2_1:647957-647976 | Msa0186010:CDS | 50.0% | |
ACCATGAAGTGGTCAAGGTC+AGG | - | chr2_1:647961-647980 | None:intergenic | 50.0% | |
GAAAAGGGCCACTCATGTTC+AGG | - | chr2_1:648417-648436 | None:intergenic | 50.0% | |
ACCATCTCATGATTCGCCCA+AGG | - | chr2_1:648644-648663 | None:intergenic | 50.0% | |
AGCTGGCACTAGTTCAGAGT+TGG | - | chr2_1:648967-648986 | None:intergenic | 50.0% | |
GCACTGCAAGTTACATGAGC+TGG | - | chr2_1:648984-649003 | None:intergenic | 50.0% | |
GCCTGTGGCACAAGTAATTG+AGG | + | chr2_1:649026-649045 | Msa0186010:intron | 50.0% | |
ATCATGGTCAAGCTTGTGGG+AGG | - | chr2_1:649121-649140 | None:intergenic | 50.0% | |
CTGCTACATGTGAGCTTCAG+TGG | - | chr2_1:649424-649443 | None:intergenic | 50.0% | |
CTGAAGCTCACATGTAGCAG+TGG | + | chr2_1:649424-649443 | Msa0186010:intron | 50.0% | |
AGCTCTGTACTCAGCTTCAG+AGG | + | chr2_1:649451-649470 | Msa0186010:intron | 50.0% | |
CTCAGCTTCAGAGGAAGATC+TGG | + | chr2_1:649460-649479 | Msa0186010:intron | 50.0% | |
ATGTTGATGCAGACTGGGCA+GGG | - | chr2_1:649577-649596 | None:intergenic | 50.0% | |
TATGTTGATGCAGACTGGGC+AGG | - | chr2_1:649578-649597 | None:intergenic | 50.0% | |
GGGCTATGTTGATGCAGACT+GGG | - | chr2_1:649582-649601 | None:intergenic | 50.0% | |
TGGGCTATGTTGATGCAGAC+TGG | - | chr2_1:649583-649602 | None:intergenic | 50.0% | |
GGGAAGAAAAGACCAAGACC+AGG | + | chr2_1:649626-649645 | Msa0186010:intron | 50.0% | |
TCTTGCTACAGGAGGCTCAT+TGG | - | chr2_1:649785-649804 | None:intergenic | 50.0% | |
TGCAGTTTGCAGACTTTGCC+AGG | + | chr2_1:650232-650251 | Msa0186010:intron | 50.0% | |
GCAGTTTGCAGACTTTGCCA+GGG | + | chr2_1:650233-650252 | Msa0186010:intron | 50.0% | |
!! | GAAGGGGTTTCTAGTTTCCC+TGG | - | chr2_1:650253-650272 | None:intergenic | 50.0% |
GGGAAACTAGAAACCCCTTC+TGG | + | chr2_1:650253-650272 | Msa0186010:intron | 50.0% | |
CCACCCAATGTGAAGCCAAT+TGG | - | chr2_1:650532-650551 | None:intergenic | 50.0% | |
! | CCAATTGGCTTCACATTGGG+TGG | + | chr2_1:650529-650548 | Msa0186010:intron | 50.0% |
ACAAGAGTCAAATCTGCCCC+GGG | - | chr2_1:650814-650833 | None:intergenic | 50.0% | |
ATAACAGGTGGTGAGGGAAG+AGG | + | chr2_1:650844-650863 | Msa0186010:intron | 50.0% | |
GGGATGGAAGTGGAAGATGA+TGG | + | chr2_1:650874-650893 | Msa0186010:intron | 50.0% | |
GGGTCTGACACAGTTTCAGA+AGG | + | chr2_1:650928-650947 | Msa0186010:intron | 50.0% | |
ACCCCAACAAAATGCAAGGG+TGG | - | chr2_1:651415-651434 | None:intergenic | 50.0% | |
CTAGTACCTTGCCTGTCAGT+TGG | + | chr2_1:652329-652348 | Msa0186010:intron | 50.0% | |
CATTCACCAACTGACAGGCA+AGG | - | chr2_1:652338-652357 | None:intergenic | 50.0% | |
CGTACTCTGCACACACAGTT+TGG | + | chr2_1:652950-652969 | Msa0186010:intron | 50.0% | |
CTGCACACACAGTTTGGTAC+AGG | + | chr2_1:652956-652975 | Msa0186010:intron | 50.0% | |
CGATTCCAAGGTCGAAACAG+AGG | + | chr2_1:653223-653242 | Msa0186010:intron | 50.0% | |
! | TTGTTACGAGGCGCCATTGA+TGG | + | chr2_1:653439-653458 | Msa0186010:intron | 50.0% |
AGCTGGCACTAGTTCAGAGT+TGG | - | chr2_1:648967-648986 | None:intergenic | 50.0% | |
GCACTGCAAGTTACATGAGC+TGG | - | chr2_1:648984-649003 | None:intergenic | 50.0% | |
GCCTGTGGCACAAGTAATTG+AGG | + | chr2_1:649026-649045 | Msa0186010:intron | 50.0% | |
!! | CAAGTGCCGAGTGTAGACTT+TGG | - | chr2_1:653932-653951 | None:intergenic | 50.0% |
!! | CCAGGGCACCATATTTTCAG+GGG | - | chr2_1:654289-654308 | None:intergenic | 50.0% |
!! | GTCCAGGGCACCATATTTTC+AGG | - | chr2_1:654291-654310 | None:intergenic | 50.0% |
TTAGCTGTGGTCCTGAGCAT+GGG | - | chr2_1:654328-654347 | None:intergenic | 50.0% | |
TTTAGCTGTGGTCCTGAGCA+TGG | - | chr2_1:654329-654348 | None:intergenic | 50.0% | |
TTCTTGATAGGAGCGGTACG+AGG | - | chr2_1:655443-655462 | None:intergenic | 50.0% | |
AATGCGAGGACCTCTTTGGT+GGG | - | chr2_1:655594-655613 | None:intergenic | 50.0% | |
TACCAATGCGAGGACCTCTT+TGG | - | chr2_1:655598-655617 | None:intergenic | 50.0% | |
GAGTCCTACCCACAACTTTG+TGG | + | chr2_1:655622-655641 | Msa0186010:intron | 50.0% | |
TCACCCACAAAGTTGTGGGT+AGG | - | chr2_1:655629-655648 | None:intergenic | 50.0% | |
ACCAAATCCGCCCCGTTTAA+GGG | - | chr2_1:655822-655841 | None:intergenic | 50.0% | |
! | TTAAACGGGGCGGATTTGGT+CGG | + | chr2_1:655822-655841 | Msa0186010:intron | 50.0% |
AATGGAGACGGTTTGAACCC+AGG | - | chr2_1:656250-656269 | None:intergenic | 50.0% | |
! | TTGGAGTATCCGGGCTTCAT+AGG | - | chr2_1:656443-656462 | None:intergenic | 50.0% |
GAAGCCCGGATACTCCAAAA+CGG | + | chr2_1:656445-656464 | Msa0186010:intron | 50.0% | |
!!! | GTGTCCGTTTTGGAGTATCC+GGG | - | chr2_1:656452-656471 | None:intergenic | 50.0% |
!!! | CGTGTCCGTTTTGGAGTATC+CGG | - | chr2_1:656453-656472 | None:intergenic | 50.0% |
! | ATACGGGTACGTGTCCGTTT+TGG | - | chr2_1:656462-656481 | None:intergenic | 50.0% |
TCTCGGATACGTACCCGTAT+CGG | + | chr2_1:656506-656525 | Msa0186010:intron | 50.0% | |
CCCGGATACTATATGAGTGC+GGG | - | chr2_1:656923-656942 | None:intergenic | 50.0% | |
CCCGCACTCATATAGTATCC+GGG | + | chr2_1:656920-656939 | Msa0186010:intron | 50.0% | |
GCCCGGATACTATATGAGTG+CGG | - | chr2_1:656924-656943 | None:intergenic | 50.0% | |
CTTTGTGGCACATCATGTCC+AGG | + | chr2_1:657735-657754 | Msa0186010:CDS | 50.0% | |
ATGCTCCTTCGTAAGTACGG+GGG | + | chr2_1:657777-657796 | Msa0186010:CDS | 50.0% | |
TGGGATAAGGCCACCTATAG+TGG | - | chr2_1:657899-657918 | None:intergenic | 50.0% | |
!! | CTATAGGTGGCCTTATCCCA+CGG | + | chr2_1:657899-657918 | Msa0186010:CDS | 50.0% |
TGAAGGAGACTCCGGTAATC+CGG | - | chr2_1:658120-658139 | None:intergenic | 50.0% | |
CTGCAGCTGTCAGATATGAC+TGG | + | chr2_1:658469-658488 | Msa0186010:CDS | 50.0% | |
GTAAGTAGCACCAGCATAGC+AGG | + | chr2_1:658586-658605 | Msa0186010:CDS | 50.0% | |
TTACAGAGGTCCTGCTATGC+TGG | - | chr2_1:658599-658618 | None:intergenic | 50.0% | |
AGGGCATAGGCGTATTGTTC+TGG | - | chr2_1:658745-658764 | None:intergenic | 50.0% | |
CTACTCAGTGACATAGGTGC+CGG | - | chr2_1:658784-658803 | None:intergenic | 50.0% | |
GCTGCTGGATTGCATCTAGG+AGG | + | chr2_1:647486-647505 | Msa0186010:five_prime_UTR | 55.0% | |
GCCTTGGGCGAATCATGAGA+TGG | + | chr2_1:648640-648659 | Msa0186010:intron | 55.0% | |
GTGAGGGAAGAGGAGGGTTA+GGG | + | chr2_1:650854-650873 | Msa0186010:intron | 55.0% | |
AGGAGGGTTAGGGATGGAAG+TGG | + | chr2_1:650864-650883 | Msa0186010:intron | 55.0% | |
! | TCTTCGCATTGATCGAGCCC+AGG | + | chr2_1:653315-653334 | Msa0186010:intron | 55.0% |
CCCCTGAAAATATGGTGCCC+TGG | + | chr2_1:654286-654305 | Msa0186010:intron | 55.0% | |
! | TATAGGCAACGGGGTGGGTT+AGG | + | chr2_1:655298-655317 | Msa0186010:intron | 55.0% |
!! | ATAGGCAACGGGGTGGGTTA+GGG | + | chr2_1:655299-655318 | Msa0186010:intron | 55.0% |
AGGAAACTCAGCCCCGATTG+GGG | - | chr2_1:655423-655442 | None:intergenic | 55.0% | |
GAGGAAACTCAGCCCCGATT+GGG | - | chr2_1:655424-655443 | None:intergenic | 55.0% | |
CAATGCGAGGACCTCTTTGG+TGG | - | chr2_1:655595-655614 | None:intergenic | 55.0% | |
CACCAAAGAGGTCCTCGCAT+TGG | + | chr2_1:655593-655612 | Msa0186010:intron | 55.0% | |
GGACTCATGCTACCAATGCG+AGG | - | chr2_1:655608-655627 | None:intergenic | 55.0% | |
GGAGTTTCCCTTAAACGGGG+CGG | + | chr2_1:655812-655831 | Msa0186010:intron | 55.0% | |
! | TCCCTTAAACGGGGCGGATT+TGG | + | chr2_1:655818-655837 | Msa0186010:intron | 55.0% |
GACCAAATCCGCCCCGTTTA+AGG | - | chr2_1:655823-655842 | None:intergenic | 55.0% | |
! | TAAACGGGGCGGATTTGGTC+GGG | + | chr2_1:655823-655842 | Msa0186010:intron | 55.0% |
! | GGATTTGGTCGGGTTTGGGT+AGG | + | chr2_1:655833-655852 | Msa0186010:intron | 55.0% |
TTTGGTCGGGTTTGGGTAGG+TGG | + | chr2_1:655836-655855 | Msa0186010:intron | 55.0% | |
TTGGTCGGGTTTGGGTAGGT+GGG | + | chr2_1:655837-655856 | Msa0186010:intron | 55.0% | |
GTGCGGGTATGATACGACAC+AGG | - | chr2_1:656907-656926 | None:intergenic | 55.0% | |
GGTTAGATCACGAGGCAGCA+GGG | + | chr2_1:657652-657671 | Msa0186010:intron | 55.0% | |
GGTAACCCCCGTACTTACGA+AGG | - | chr2_1:657785-657804 | None:intergenic | 55.0% | |
GGTGGAACGTCCACTATAGG+TGG | + | chr2_1:657886-657905 | Msa0186010:CDS | 55.0% | |
CGGCACCTATGTCACTGAGT+AGG | + | chr2_1:658782-658801 | Msa0186010:three_prime_UTR | 55.0% | |
AGGACAGATGGTCGTGACGC+GGG | - | chr2_1:648568-648587 | None:intergenic | 60.0% | |
GAGGACAGATGGTCGTGACG+CGG | - | chr2_1:648569-648588 | None:intergenic | 60.0% | |
ACAGGTGGTGAGGGAAGAGG+AGG | + | chr2_1:650847-650866 | Msa0186010:intron | 60.0% | |
CAGGTGGTGAGGGAAGAGGA+GGG | + | chr2_1:650848-650867 | Msa0186010:intron | 60.0% | |
GGTGAGGGAAGAGGAGGGTT+AGG | + | chr2_1:650853-650872 | Msa0186010:intron | 60.0% | |
GGGAAGAGGAGGGTTAGGGA+TGG | + | chr2_1:650858-650877 | Msa0186010:intron | 60.0% | |
!! | TAGGCAACGGGGTGGGTTAG+GGG | + | chr2_1:655300-655319 | Msa0186010:intron | 60.0% |
CACGCATTTCCGCCCCCAAT+CGG | + | chr2_1:655407-655426 | Msa0186010:intron | 60.0% | |
ACGCATTTCCGCCCCCAATC+GGG | + | chr2_1:655408-655427 | Msa0186010:intron | 60.0% | |
GGAAACTCAGCCCCGATTGG+GGG | - | chr2_1:655422-655441 | None:intergenic | 60.0% | |
CGAGGAAACTCAGCCCCGAT+TGG | - | chr2_1:655425-655444 | None:intergenic | 60.0% | |
! | GGGCGGATTTGGTCGGGTTT+GGG | + | chr2_1:655829-655848 | Msa0186010:intron | 60.0% |
GGGTTAGATCACGAGGCAGC+AGG | + | chr2_1:657651-657670 | Msa0186010:intron | 60.0% | |
!! | GCTGGGTTGGCTACAGCACC+TGG | - | chr2_1:646942-646961 | None:intergenic | 65.0% |
TGCAGACTGGGCAGGGTGTG+TGG | - | chr2_1:649570-649589 | None:intergenic | 65.0% | |
TGGTCCTGAGCATGGGCCGA+GGG | - | chr2_1:654321-654340 | None:intergenic | 65.0% | |
CGCATTTCCGCCCCCAATCG+GGG | + | chr2_1:655409-655428 | Msa0186010:intron | 65.0% | |
AACTCAGCCCCGATTGGGGG+CGG | - | chr2_1:655419-655438 | None:intergenic | 65.0% | |
! | GGGGCGGATTTGGTCGGGTT+TGG | + | chr2_1:655828-655847 | Msa0186010:intron | 65.0% |
CGAGGCAGCAGGGACATCAG+AGG | + | chr2_1:657662-657681 | Msa0186010:CDS | 65.0% | |
GGTCGTGACGCGGGCCTCAA+TGG | - | chr2_1:648559-648578 | None:intergenic | 70.0% | |
GTCCTGAGCATGGGCCGAGG+GGG | - | chr2_1:654319-654338 | None:intergenic | 70.0% | |
GGTCCTGAGCATGGGCCGAG+GGG | - | chr2_1:654320-654339 | None:intergenic | 70.0% | |
GTGGTCCTGAGCATGGGCCG+AGG | - | chr2_1:654322-654341 | None:intergenic | 70.0% | |
GCCCTGGACTGCCTCCCCCT+CGG | + | chr2_1:654302-654321 | Msa0186010:intron | 75.0% | |
GCCGAGGGGGAGGCAGTCCA+GGG | - | chr2_1:654306-654325 | None:intergenic | 75.0% | |
CTGAGCATGGGCCGAGGGGG+AGG | - | chr2_1:654316-654335 | None:intergenic | 75.0% | |
CTCCCCCTCGGCCCATGCTC+AGG | + | chr2_1:654314-654333 | Msa0186010:intron | 75.0% | |
! | GGCCGAGGGGGAGGCAGTCC+AGG | - | chr2_1:654307-654326 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 646789 | 659011 | 646789 | ID=Msa0186010;Name=Msa0186010 |
chr2_1 | mRNA | 646789 | 659011 | 646789 | ID=Msa0186010-mRNA-1;Parent=Msa0186010;Name=Msa0186010-mRNA-1;_AED=0.04;_eAED=0.04;_QI=293|1|1|1|0.8|0.66|6|393|267 |
chr2_1 | exon | 646789 | 646990 | 646789 | ID=Msa0186010-mRNA-1:exon:98;Parent=Msa0186010-mRNA-1 |
chr2_1 | exon | 647445 | 647655 | 647445 | ID=Msa0186010-mRNA-1:exon:99;Parent=Msa0186010-mRNA-1 |
chr2_1 | exon | 647868 | 647978 | 647868 | ID=Msa0186010-mRNA-1:exon:100;Parent=Msa0186010-mRNA-1 |
chr2_1 | exon | 648142 | 648289 | 648142 | ID=Msa0186010-mRNA-1:exon:101;Parent=Msa0186010-mRNA-1 |
chr2_1 | exon | 657658 | 657920 | 657658 | ID=Msa0186010-mRNA-1:exon:102;Parent=Msa0186010-mRNA-1 |
chr2_1 | exon | 658457 | 659011 | 658457 | ID=Msa0186010-mRNA-1:exon:103;Parent=Msa0186010-mRNA-1 |
chr2_1 | five_prime_UTR | 646789 | 646990 | 646789 | ID=Msa0186010-mRNA-1:five_prime_utr;Parent=Msa0186010-mRNA-1 |
chr2_1 | five_prime_UTR | 647445 | 647535 | 647445 | ID=Msa0186010-mRNA-1:five_prime_utr;Parent=Msa0186010-mRNA-1 |
chr2_1 | CDS | 647536 | 647655 | 647536 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
chr2_1 | CDS | 647868 | 647978 | 647868 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
chr2_1 | CDS | 648142 | 648289 | 648142 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
chr2_1 | CDS | 657658 | 657920 | 657658 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
chr2_1 | CDS | 658457 | 658618 | 658457 | ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1 |
chr2_1 | three_prime_UTR | 658619 | 659011 | 658619 | ID=Msa0186010-mRNA-1:three_prime_utr;Parent=Msa0186010-mRNA-1 |
Gene Sequence |
Protein sequence |