AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0186010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186010 MtrunA17_Chr1g0192791 97.761 268 5 1 1 267 1 268 0.0 544
Msa0186010 MtrunA17_Chr5g0413201 53.307 257 104 4 9 259 63 309 8.64e-84 253
Msa0186010 MtrunA17_Chr1g0151961 48.810 252 116 4 18 264 119 362 1.69e-70 221
Msa0186010 MtrunA17_Chr5g0439391 48.996 249 102 4 19 259 47 278 4.25e-68 213
Msa0186010 MtrunA17_Chr2g0289201 50.617 243 106 4 18 256 117 349 4.42e-66 210
Msa0186010 MtrunA17_Chr3g0137241 35.249 261 122 8 19 244 107 355 1.96e-37 135
Msa0186010 MtrunA17_Chr1g0149651 34.538 249 138 6 19 244 174 420 2.16e-37 136
Msa0186010 MtrunA17_Chr5g0398181 33.597 253 145 4 15 244 24 276 1.49e-36 131
Msa0186010 MtrunA17_Chr4g0065241 33.065 248 147 4 16 244 68 315 2.77e-36 131
Msa0186010 MtrunA17_Chr2g0305101 34.274 248 138 6 19 244 95 339 3.37e-35 129
Msa0186010 MtrunA17_Chr6g0479181 34.906 106 67 1 15 120 64 167 8.26e-13 65.5
Msa0186010 MtrunA17_Chr7g0240371 38.356 73 43 1 174 246 296 366 5.07e-11 62.4
Msa0186010 MtrunA17_Chr4g0008591 42.466 73 39 2 174 246 352 421 5.83e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186010 AT1G23380.1 50.794 252 104 4 17 261 84 322 2.38e-82 250
Msa0186010 AT1G70510.1 50.201 249 110 3 17 261 68 306 9.23e-81 246
Msa0186010 AT1G23380.2 50.394 254 104 5 17 261 84 324 2.56e-80 245
Msa0186010 AT1G70510.2 49.407 253 110 4 17 261 68 310 2.47e-78 239
Msa0186010 AT1G62360.1 50.202 247 107 4 18 258 121 357 5.93e-68 215
Msa0186010 AT4G08150.1 47.581 248 116 5 18 258 134 374 1.11e-66 213
Msa0186010 AT1G62990.1 34.661 251 142 6 15 244 26 275 1.78e-39 139
Msa0186010 AT5G25220.2 35.200 250 132 6 19 244 160 403 2.50e-38 139
Msa0186010 AT5G25220.1 35.200 250 132 6 19 244 160 403 2.80e-38 139
Msa0186010 AT5G11060.1 35.156 256 124 8 19 244 124 367 1.90e-37 136
Msa0186010 AT4G32040.2 34.146 246 140 5 19 244 119 362 9.55e-37 134
Msa0186010 AT4G32040.1 34.146 246 140 5 19 244 119 362 1.14e-36 134
Msa0186010 AT1G75430.1 49.091 55 28 0 192 246 209 263 5.16e-11 62.4
Msa0186010 AT5G02030.1 46.667 60 32 0 187 246 350 409 8.75e-11 62.4

Find 98 sgRNAs with CRISPR-Local

Find 820 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCTCTTCTTGAAGAAAT+AGG 0.173162 2_1:+647889 Msa0186010:CDS
TCTCACGGAAAGCATTATTT+TGG 0.227729 2_1:-647924 None:intergenic
ATTTCTCAAGAAAAGGAAAA+AGG 0.267954 2_1:+657824 Msa0186010:CDS
AGGGCATAGGCGTATTGTTC+TGG 0.295882 2_1:-658742 None:intergenic
ATGATGATTAGCCTTGGATT+TGG 0.302616 2_1:+658988 Msa0186010:three_prime_UTR
CTTCTCTTCTTGAAGAAATA+GGG 0.308161 2_1:+647890 Msa0186010:CDS
ACAACCAATCGGATCTAATA+AGG 0.325364 2_1:+647543 Msa0186010:CDS
ATATAAAGCAGATAAATAAT+TGG 0.326164 2_1:+658497 Msa0186010:CDS
TTTACAGTGGGTCATATTGA+TGG 0.357534 2_1:+647438 Msa0186010:intron
TTTACCTGAACGGTTGTAAT+CGG 0.376328 2_1:-648272 None:intergenic
TGTTGCTTCATTGAAGGGCT+TGG 0.378477 2_1:-648185 None:intergenic
ATCCATGACATTCAAGCAAA+AGG 0.380616 2_1:-658680 None:intergenic
GTTTATTCTTATTCTGCTGC+TGG 0.387145 2_1:+647471 Msa0186010:five_prime_UTR
AATAATGCTTTCCGTGAGAT+AGG 0.392343 2_1:+647928 Msa0186010:CDS
GATAGTAGATTTGGATAAAG+AGG 0.394577 2_1:-647611 None:intergenic
TCCTGACCTTGACCACTTCA+TGG 0.397547 2_1:+647957 Msa0186010:CDS
AAATAATGTTGCTTCATTGA+AGG 0.405931 2_1:-648191 None:intergenic
ATTTGTATTACCGTGGGATA+AGG 0.406677 2_1:-657909 None:intergenic
AAGTTTCTTGCTAGAGGTGC+AGG 0.408023 2_1:+658958 Msa0186010:three_prime_UTR
TCCAAGAAAACCTGGGGAAA+AGG 0.408702 2_1:-646885 None:intergenic
TCTGCTGCTGGATTGCATCT+AGG 0.408994 2_1:+647483 Msa0186010:five_prime_UTR
GACAGGAATTTCTCAAGAAA+AGG 0.410633 2_1:+657817 Msa0186010:CDS
ATTATTAGTTATCTGTTTCG+TGG 0.419970 2_1:+658856 Msa0186010:three_prime_UTR
GAAATGCTCCTTCGTAAGTA+CGG 0.420426 2_1:+657774 Msa0186010:CDS
AATAATGTTGCTTCATTGAA+GGG 0.423656 2_1:-648190 None:intergenic
GGATGCAAGAAAAGCATTGA+TGG 0.424199 2_1:+657860 Msa0186010:CDS
GAAAGGAAAGAGTGGAAAGC+TGG 0.447406 2_1:-646957 None:intergenic
GGAAAGGTTGAAGCAGTAGA+AGG 0.448898 2_1:+657699 Msa0186010:CDS
ATTGGTGGAACGTCCACTAT+AGG 0.452627 2_1:+657883 Msa0186010:CDS
TCATCCGATTACAACCGTTC+AGG 0.455239 2_1:+648268 Msa0186010:CDS
GGGTTAGATCACGAGGCAGC+AGG 0.462846 2_1:+657651 Msa0186010:intron
GCTGGGTTGGCTACAGCACC+TGG 0.465293 2_1:-646939 None:intergenic
CCTCTGTAAATTTATTCTGC+AGG 0.471764 2_1:+658610 Msa0186010:exon
AAATGCTCCTTCGTAAGTAC+GGG 0.472749 2_1:+657775 Msa0186010:CDS
TTACAGAGGTCCTGCTATGC+TGG 0.477108 2_1:-658596 None:intergenic
ACCATGAAGTGGTCAAGGTC+AGG 0.484448 2_1:-647958 None:intergenic
TGGGATAAGGCCACCTATAG+TGG 0.485346 2_1:-657896 None:intergenic
TCCATGACATTCAAGCAAAA+GGG 0.493060 2_1:-658679 None:intergenic
CTTCTTTCGCAGATTAAGAC+AGG 0.496624 2_1:-658652 None:intergenic
ATTCCTGTCTTAAGTTGCTA+AGG 0.503658 2_1:-657803 None:intergenic
CAAGAAAAGCATTGATGGAT+TGG 0.506407 2_1:+657865 Msa0186010:CDS
AAAGAGGGTGAGTTGCGATC+TGG 0.510035 2_1:-647595 None:intergenic
GTAAGTAGCACCAGCATAGC+AGG 0.513299 2_1:+658586 Msa0186010:CDS
AGAAGTGGGAAAGGAAAGAG+TGG 0.525785 2_1:-646965 None:intergenic
ATATGATATTAGCTAGGCTT+CGG 0.529086 2_1:+658701 Msa0186010:three_prime_UTR
TCTAATAAGGTTGGATATGA+CGG 0.529171 2_1:+647556 Msa0186010:CDS
AAAGGAAAGAGTGGAAAGCT+GGG 0.540723 2_1:-646956 None:intergenic
AGAAGAGAAGCAAGTTCTGT+TGG 0.544757 2_1:-647877 None:intergenic
GAAGAAACAAACATAAGAAG+TGG 0.546211 2_1:-646980 None:intergenic
ATAGTAGATTTGGATAAAGA+GGG 0.546531 2_1:-647610 None:intergenic
CCAATCGGATCTAATAAGGT+TGG 0.547810 2_1:+647547 Msa0186010:CDS
TCTTTAAGCTCTTTATCACC+TGG 0.551142 2_1:-657753 None:intergenic
ATAGGCGTATTGTTCTGGAT+TGG 0.551760 2_1:-658737 None:intergenic
CCAACCTTATTAGATCCGAT+TGG 0.554336 2_1:-647547 None:intergenic
GAAAAGCATTGATGGATTGG+TGG 0.555034 2_1:+657868 Msa0186010:CDS
TTACCTTAGCAACTTAAGAC+AGG 0.555596 2_1:+657800 Msa0186010:CDS
GAAAGAGTGGAAAGCTGGGT+TGG 0.556200 2_1:-646952 None:intergenic
AATTTGAAGTTTCTTGCTAG+AGG 0.556900 2_1:+658952 Msa0186010:three_prime_UTR
ACAACTAAACGAACTTTGCA+AGG 0.560050 2_1:+648231 Msa0186010:CDS
GAAAATCTCATATCTTCAGA+TGG 0.560173 2_1:-658550 None:intergenic
AGTGGGTCATATTGATGGCA+AGG 0.560418 2_1:+647443 Msa0186010:intron
TCACATGGAACACAACCAAT+CGG 0.562048 2_1:+647532 Msa0186010:exon
CTGCAGCTGTCAGATATGAC+TGG 0.564508 2_1:+658469 Msa0186010:CDS
TTAAGTTCTCTTTACCTGAA+CGG 0.565840 2_1:-648282 None:intergenic
TCAGAGGATGAAATGAGTTG+TGG 0.568316 2_1:+657678 Msa0186010:CDS
CTGTAAATTTATTCTGCAGG+TGG 0.571978 2_1:+658613 Msa0186010:exon
ACCTGGGGAAAAGGAAAGAG+AGG 0.574069 2_1:-646876 None:intergenic
AATATACCATGAAGTGGTCA+AGG 0.574865 2_1:-647963 None:intergenic
TAAAAGAATATACCATGAAG+TGG 0.580028 2_1:-647969 None:intergenic
ACAGACCTACTCAGTGACAT+AGG 0.581393 2_1:-658787 None:intergenic
TCAATCAGAGGAAAAGACAC+TGG 0.584588 2_1:+658524 Msa0186010:CDS
AAGAATACTCTCCAAATCCA+AGG 0.590642 2_1:-658999 None:intergenic
AAGAAACAAACATAAGAAGT+GGG 0.593665 2_1:-646979 None:intergenic
ACAAACATAAGAAGTGGGAA+AGG 0.594386 2_1:-646974 None:intergenic
CAGGATCATCTCCTATCTCA+CGG 0.597806 2_1:-647939 None:intergenic
TCATGGATATGATATTAGCT+AGG 0.597845 2_1:+658695 Msa0186010:three_prime_UTR
CTACTCAGTGACATAGGTGC+CGG 0.599631 2_1:-658781 None:intergenic
CTTTGTGGCACATCATGTCC+AGG 0.602003 2_1:+657735 Msa0186010:CDS
ATTGGTTGTGTTCCATGTGA+AGG 0.604142 2_1:-647529 None:intergenic
GGGGAAAAGGAAAGAGAGGA+AGG 0.606019 2_1:-646872 None:intergenic
GGTGGTCATGATGAACTTTG+TGG 0.607949 2_1:+657720 Msa0186010:CDS
GGTTAGATCACGAGGCAGCA+GGG 0.610469 2_1:+657652 Msa0186010:intron
CTATAGGTGGCCTTATCCCA+CGG 0.616947 2_1:+657899 Msa0186010:CDS
CAACTAAACGAACTTTGCAA+GGG 0.626350 2_1:+648232 Msa0186010:CDS
AACTAAACGAACTTTGCAAG+GGG 0.629556 2_1:+648233 Msa0186010:CDS
ATAATTGGTTCATCAATCAG+AGG 0.632866 2_1:+658512 Msa0186010:CDS
CGGCACCTATGTCACTGAGT+AGG 0.637662 2_1:+658782 Msa0186010:three_prime_UTR
CGAGGCAGCAGGGACATCAG+AGG 0.640139 2_1:+657662 Msa0186010:CDS
AGTTCTTCATAGATACAAAG+AGG 0.649236 2_1:+648156 Msa0186010:CDS
GGTGGAACGTCCACTATAGG+TGG 0.655633 2_1:+657886 Msa0186010:CDS
TAATAATAACTACCTTCACA+TGG 0.656128 2_1:+647517 Msa0186010:exon
GCTGCTGGATTGCATCTAGG+AGG 0.656462 2_1:+647486 Msa0186010:five_prime_UTR
GGATGAAATGAGTTGTGGAA+AGG 0.661174 2_1:+657683 Msa0186010:CDS
AGGCACACACTCTCACAACA+AGG 0.668052 2_1:-646852 None:intergenic
AAGGTTGAAGCAGTAGAAGG+TGG 0.681013 2_1:+657702 Msa0186010:CDS
AATGCTCCTTCGTAAGTACG+GGG 0.701629 2_1:+657776 Msa0186010:CDS
CCTGCAGAATAAATTTACAG+AGG 0.707916 2_1:-658610 None:intergenic
ATGCTCCTTCGTAAGTACGG+GGG 0.733963 2_1:+657777 Msa0186010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAATTTATATATTAA+AGG - chr2_1:654243-654262 None:intergenic 0.0%
!! TTAATATATAAATTATATAT+AGG + chr2_1:654243-654262 Msa0186010:intron 0.0%
!! TTTATAATATTATACGAATA+TGG + chr2_1:647055-647074 Msa0186010:intron 10.0%
!! AACATATTATATCATATATA+TGG - chr2_1:647173-647192 None:intergenic 10.0%
!! AAAAAAATATAGTAGAAAAT+TGG - chr2_1:648016-648035 None:intergenic 10.0%
!!! ATAGGTAAATTATAAAATTT+TGG + chr2_1:654261-654280 Msa0186010:intron 10.0%
!!! TTTTTTTTTTAAAAAAAAGC+CGG - chr2_1:654922-654941 None:intergenic 10.0%
!! TATAAAATGAATTTGAATTT+CGG + chr2_1:655025-655044 Msa0186010:intron 10.0%
!! CTATACATTAAATAAAAATT+TGG + chr2_1:655688-655707 Msa0186010:intron 10.0%
!!! AATTTTAATAACTACATTTT+TGG - chr2_1:655886-655905 None:intergenic 10.0%
!! TAGTTATTAAAATTTATTTG+AGG + chr2_1:655892-655911 Msa0186010:intron 10.0%
!!! AATATTTTTTTTTTGTACAA+TGG - chr2_1:656268-656287 None:intergenic 10.0%
!! TATTAAAAAAAATTATGTTG+TGG + chr2_1:657568-657587 Msa0186010:intron 10.0%
!! ATATTATATCATATATATGG+TGG - chr2_1:647170-647189 None:intergenic 15.0%
!!! TATAGTTTTATACGTATAAT+TGG + chr2_1:647310-647329 Msa0186010:intron 15.0%
!!! ATATAGAATAAAAAACCTTT+TGG - chr2_1:647652-647671 None:intergenic 15.0%
!! ATTACATTAATTAAATCAGA+TGG + chr2_1:648036-648055 Msa0186010:intron 15.0%
!!! AACATTTAATTTATTACACT+TGG + chr2_1:648112-648131 Msa0186010:intron 15.0%
!! AAAAATATCCAGATATTTAA+AGG - chr2_1:648323-648342 None:intergenic 15.0%
!! AAATTAACAAAAAATACACA+AGG + chr2_1:648679-648698 Msa0186010:intron 15.0%
!!! TTTGAAGGATTATTTTTATA+AGG + chr2_1:651018-651037 Msa0186010:intron 15.0%
!! AAAATCATCAGAAAATTTAA+TGG + chr2_1:652133-652152 Msa0186010:intron 15.0%
!! AACATAAATATAAATCGTTT+AGG + chr2_1:654372-654391 Msa0186010:intron 15.0%
!! ATTAAAATCCATATTATTGT+CGG - chr2_1:655000-655019 None:intergenic 15.0%
!!! TTTAAATGTTCTTTTTGTAT+AGG - chr2_1:655549-655568 None:intergenic 15.0%
!!! ACGTGAAAATTTTAAAATTT+AGG - chr2_1:656875-656894 None:intergenic 15.0%
!! TTCATGTCAATATATTAAAA+TGG - chr2_1:657357-657376 None:intergenic 15.0%
!! TTGATTATATATCTGATAAA+AGG + chr2_1:658208-658227 Msa0186010:intron 15.0%
!!! TATAATTTGATGAATTTTTC+AGG + chr2_1:658435-658454 Msa0186010:intron 15.0%
!! ATATAAAGCAGATAAATAAT+TGG + chr2_1:658497-658516 Msa0186010:CDS 15.0%
!!! ATATTTTTCACTCAATCATA+TGG + chr2_1:647688-647707 Msa0186010:intron 20.0%
!! ATTAATTAAATCAGATGGAA+TGG + chr2_1:648041-648060 Msa0186010:intron 20.0%
!! TATTATCGTACATAATTAGA+GGG - chr2_1:648459-648478 None:intergenic 20.0%
!! TTATTATCGTACATAATTAG+AGG - chr2_1:648460-648479 None:intergenic 20.0%
!! CTAATTATGTACGATAATAA+TGG + chr2_1:648460-648479 Msa0186010:intron 20.0%
!! GGAATGATAAATATTTATCA+TGG - chr2_1:649137-649156 None:intergenic 20.0%
!! AAATTCAAGATTAAGGATTT+GGG - chr2_1:649992-650011 None:intergenic 20.0%
!! TAAATTCAAGATTAAGGATT+TGG - chr2_1:649993-650012 None:intergenic 20.0%
!!! AATTTGAAGTTGAATTGAAA+GGG + chr2_1:650908-650927 Msa0186010:intron 20.0%
!! TATAAGGAAAAATACTTTCA+TGG + chr2_1:651034-651053 Msa0186010:intron 20.0%
!!! ATTTTTCTTGGTTATAAAAG+TGG - chr2_1:651126-651145 None:intergenic 20.0%
!! TGATTGTGTAATAGAAAATA+AGG + chr2_1:651246-651265 Msa0186010:intron 20.0%
!! AAAATTGTTAGAAGTGATAA+TGG - chr2_1:651507-651526 None:intergenic 20.0%
!! ATAACCTTAATGAAATCTAA+AGG - chr2_1:651594-651613 None:intergenic 20.0%
!!! AATTGTATTGTGAGTTTTAA+TGG - chr2_1:652038-652057 None:intergenic 20.0%
!!! TAAGTCTCAAATTTTGTTAA+TGG - chr2_1:652834-652853 None:intergenic 20.0%
!!! GTTTTACACAATAACATATA+TGG + chr2_1:653979-653998 Msa0186010:intron 20.0%
!! ATAAAGCCAAAAAACATTTA+GGG - chr2_1:654582-654601 None:intergenic 20.0%
!!! TTTTTTGGCTTTATGTTATT+TGG + chr2_1:654588-654607 Msa0186010:intron 20.0%
!!! TGTTATTTGGATTATTTGTA+AGG + chr2_1:654601-654620 Msa0186010:intron 20.0%
!!! TTTCTTTGTCAAACTTTTTT+CGG + chr2_1:654844-654863 Msa0186010:intron 20.0%
!!! GTTAAACAAATTTTTGCTAT+GGG - chr2_1:655056-655075 None:intergenic 20.0%
!!! TGTTAAACAAATTTTTGCTA+TGG - chr2_1:655057-655076 None:intergenic 20.0%
!! ATATTTGCATTCATCTAATA+TGG + chr2_1:655142-655161 Msa0186010:intron 20.0%
!!! TGTTTTTCAATGAAGATTAT+TGG + chr2_1:655187-655206 Msa0186010:intron 20.0%
!!! AAATTCAAGTTTAGTTTAGT+TGG + chr2_1:655494-655513 Msa0186010:intron 20.0%
!!! AATTCAAGTTTAGTTTAGTT+GGG + chr2_1:655495-655514 Msa0186010:intron 20.0%
!! TCCAATATAAAAACTTAACT+TGG + chr2_1:655777-655796 Msa0186010:intron 20.0%
!!! AAATTTATTTGAGGTTTGAT+AGG + chr2_1:655901-655920 Msa0186010:intron 20.0%
!!! AATTTATTTGAGGTTTGATA+GGG + chr2_1:655902-655921 Msa0186010:intron 20.0%
!!! GGTTTTAATATCAAATTGAT+TGG + chr2_1:656006-656025 Msa0186010:intron 20.0%
!! ATTGAATTTCTATAAAACAG+TGG + chr2_1:657084-657103 Msa0186010:intron 20.0%
!! TCTCACTAATAATAAAATGT+TGG + chr2_1:657322-657341 Msa0186010:intron 20.0%
!! ACTAATAATAAAATGTTGGA+GGG + chr2_1:657326-657345 Msa0186010:intron 20.0%
!!! TTGTACTAATTAAGTTGATA+TGG + chr2_1:657517-657536 Msa0186010:intron 20.0%
!!! ATTTCATTTTGTCCTTTTTT+TGG + chr2_1:657630-657649 Msa0186010:intron 20.0%
!!! TTTCATTTTGTCCTTTTTTT+GGG + chr2_1:657631-657650 Msa0186010:intron 20.0%
!! TCATCAAATTATAATCTATC+AGG - chr2_1:658428-658447 None:intergenic 20.0%
!!! AGATATGAGATTTTCTATTA+TGG + chr2_1:658558-658577 Msa0186010:CDS 20.0%
! GGAAAAGAAAAGCAAAAATA+AGG + chr2_1:646905-646924 Msa0186010:five_prime_UTR 25.0%
! AAGAAACAAACATAAGAAGT+GGG - chr2_1:646982-647001 None:intergenic 25.0%
! GTATAAAACTATAGTACTAC+TGG - chr2_1:647303-647322 None:intergenic 25.0%
! TAATAATAACTACCTTCACA+TGG + chr2_1:647517-647536 Msa0186010:exon 25.0%
! ATAGTAGATTTGGATAAAGA+GGG - chr2_1:647613-647632 None:intergenic 25.0%
! AAAAAAGCAGATAGTAGATT+TGG - chr2_1:647623-647642 None:intergenic 25.0%
! ATACTATATATTGTGCATGA+AGG + chr2_1:647846-647865 Msa0186010:intron 25.0%
! TAAAAGAATATACCATGAAG+TGG - chr2_1:647972-647991 None:intergenic 25.0%
! ATATAGTAGAAAATTGGACT+TGG - chr2_1:648010-648029 None:intergenic 25.0%
!! ATTTATTACACTTGGTGATT+AGG + chr2_1:648120-648139 Msa0186010:intron 25.0%
!! AATAATGTTGCTTCATTGAA+GGG - chr2_1:648193-648212 None:intergenic 25.0%
!! AAATAATGTTGCTTCATTGA+AGG - chr2_1:648194-648213 None:intergenic 25.0%
! TCATAATGCCTTTAAATATC+TGG + chr2_1:648312-648331 Msa0186010:intron 25.0%
! TCGTGTTACAAAAAAGAAAA+GGG - chr2_1:648432-648451 None:intergenic 25.0%
! TTCGTGTTACAAAAAAGAAA+AGG - chr2_1:648433-648452 None:intergenic 25.0%
!!! TTTCTTTTTTGTAACACGAA+TGG + chr2_1:648433-648452 Msa0186010:intron 25.0%
! GTTACAATGATCTCTTATAT+AGG + chr2_1:648846-648865 Msa0186010:intron 25.0%
!! CTTATATAGGTTGTTATTGT+AGG + chr2_1:648859-648878 Msa0186010:intron 25.0%
! AACTAACTTCCTAGTTTATA+GGG - chr2_1:648934-648953 None:intergenic 25.0%
! TAACTAACTTCCTAGTTTAT+AGG - chr2_1:648935-648954 None:intergenic 25.0%
! AATATTTATCATTCCAAGCT+TGG + chr2_1:649142-649161 Msa0186010:intron 25.0%
! GATATAAATTGGTTGAACTT+TGG + chr2_1:649164-649183 Msa0186010:intron 25.0%
! AATTCAAGATTAAGGATTTG+GGG - chr2_1:649991-650010 None:intergenic 25.0%
! AGATGCTAAATTCAAGATTA+AGG - chr2_1:649999-650018 None:intergenic 25.0%
!!! TTATGTTGATGACATCATAT+TGG - chr2_1:650065-650084 None:intergenic 25.0%
! ATGCATTGTTAACATCTAAT+TGG + chr2_1:650317-650336 Msa0186010:intron 25.0%
!!! AGAAAGTATCAAAAAAATCC+AGG + chr2_1:650410-650429 Msa0186010:intron 25.0%
! AGTACTTTGAGTAATAGAAA+TGG + chr2_1:650660-650679 Msa0186010:intron 25.0%
! AAAAGAGTGAAAATCAGTAA+TGG + chr2_1:650714-650733 Msa0186010:intron 25.0%
! AAAGAGTGAAAATCAGTAAT+GGG + chr2_1:650715-650734 Msa0186010:intron 25.0%
! CTTGTAGATTTATGTATAAC+AGG + chr2_1:650829-650848 Msa0186010:intron 25.0%
!! GAATTTGAAGTTGAATTGAA+AGG + chr2_1:650907-650926 Msa0186010:intron 25.0%
!!! CCAAAGAAATTTTTGTTTCT+AGG - chr2_1:651071-651090 None:intergenic 25.0%
! CCTAGAAACAAAAATTTCTT+TGG + chr2_1:651068-651087 Msa0186010:intron 25.0%
!! ATGCATCAATTGAAAGTTTT+TGG - chr2_1:651216-651235 None:intergenic 25.0%
! AGGTGTTTGATTGTTTAAAA+TGG + chr2_1:651266-651285 Msa0186010:intron 25.0%
!! GGTGTTTGATTGTTTAAAAT+GGG + chr2_1:651267-651286 Msa0186010:intron 25.0%
!! GTGTTTGATTGTTTAAAATG+GGG + chr2_1:651268-651287 Msa0186010:intron 25.0%
! TTCACCTTTAGATTTCATTA+AGG + chr2_1:651587-651606 Msa0186010:intron 25.0%
!!! ATGATTTTAGTAGATTCACT+TGG - chr2_1:651617-651636 None:intergenic 25.0%
! TGAACAGAAGAAATTGAAAT+AGG + chr2_1:651666-651685 Msa0186010:intron 25.0%
!!! ATTGATGCATTTTGACATTT+GGG - chr2_1:651694-651713 None:intergenic 25.0%
!!! AATTGATGCATTTTGACATT+TGG - chr2_1:651695-651714 None:intergenic 25.0%
! TCAAAATGCATCAATTCAAA+GGG + chr2_1:651699-651718 Msa0186010:intron 25.0%
! TTATTACAACTTTCAGGAAA+TGG + chr2_1:651732-651751 Msa0186010:intron 25.0%
! TTAGAATCTACATAGACAAA+AGG + chr2_1:651798-651817 Msa0186010:intron 25.0%
! ATGAGATTAAAGTGAAATTC+AGG + chr2_1:652086-652105 Msa0186010:intron 25.0%
! TGAGATTAAAGTGAAATTCA+GGG + chr2_1:652087-652106 Msa0186010:intron 25.0%
! ACTAACATAAAACTTCCTAA+TGG - chr2_1:652188-652207 None:intergenic 25.0%
!!! TTAGGAAGTTTTATGTTAGT+AGG + chr2_1:652188-652207 Msa0186010:intron 25.0%
! ACATTTGTGGAAATCTAAAA+TGG - chr2_1:652238-652257 None:intergenic 25.0%
!! ACAATTTTACTCTAAGTTCT+TGG - chr2_1:652286-652305 None:intergenic 25.0%
!! TTTGAATGAGAATTTTGCTA+TGG - chr2_1:652858-652877 None:intergenic 25.0%
!! TGCATTTTCCATGAAAATTA+TGG + chr2_1:653141-653160 Msa0186010:intron 25.0%
! GTTACAATGATCTCTTATAT+AGG + chr2_1:648846-648865 Msa0186010:intron 25.0%
!! CTTATATAGGTTGTTATTGT+AGG + chr2_1:648859-648878 Msa0186010:intron 25.0%
! AACTAACTTCCTAGTTTATA+GGG - chr2_1:648934-648953 None:intergenic 25.0%
! TAACTAACTTCCTAGTTTAT+AGG - chr2_1:648935-648954 None:intergenic 25.0%
! ATTAATTACATCCACAATTG+AGG + chr2_1:654055-654074 Msa0186010:intron 25.0%
! CTGCAATTAGAATAATGATA+TGG + chr2_1:654080-654099 Msa0186010:intron 25.0%
!!! TTAGGGATTTTTTTTGCATA+AGG + chr2_1:654547-654566 Msa0186010:intron 25.0%
! CATAAAGCCAAAAAACATTT+AGG - chr2_1:654583-654602 None:intergenic 25.0%
! TTTAATATATCGTTTCCTTC+CGG + chr2_1:654900-654919 Msa0186010:intron 25.0%
!!! TTTTTTAAAAAAAAGCCGGA+AGG - chr2_1:654918-654937 None:intergenic 25.0%
! AGATGAATGCAAATATACAA+TGG - chr2_1:655138-655157 None:intergenic 25.0%
!!! CAGTATTTTTGTGAAAATTC+GGG - chr2_1:655351-655370 None:intergenic 25.0%
!!! GCAGTATTTTTGTGAAAATT+CGG - chr2_1:655352-655371 None:intergenic 25.0%
! TTACCAAAGAAATTGAATGT+GGG - chr2_1:655476-655495 None:intergenic 25.0%
! TTTACCAAAGAAATTGAATG+TGG - chr2_1:655477-655496 None:intergenic 25.0%
!! GCCAAGTTAAGTTTTTATAT+TGG - chr2_1:655781-655800 None:intergenic 25.0%
! TGATCAAATCACAAAACTAA+AGG + chr2_1:656030-656049 Msa0186010:intron 25.0%
! GATCAAATCACAAAACTAAA+GGG + chr2_1:656031-656050 Msa0186010:intron 25.0%
! TATGGTCTACAATTAAAACT+TGG - chr2_1:656176-656195 None:intergenic 25.0%
!!! TTTTTTTTGTACAATGGAGA+CGG - chr2_1:656262-656281 None:intergenic 25.0%
!! ATTTTTGTATATCATCACAG+TGG + chr2_1:656285-656304 Msa0186010:intron 25.0%
! ATTTAATTCAGATACTTCGT+GGG - chr2_1:656566-656585 None:intergenic 25.0%
! TATTTAATTCAGATACTTCG+TGG - chr2_1:656567-656586 None:intergenic 25.0%
!! GAAGTATCTTATAAGTATCT+TGG - chr2_1:656645-656664 None:intergenic 25.0%
! ACATATCCTAGAAAAAATGA+AGG + chr2_1:656671-656690 Msa0186010:intron 25.0%
! CATATCCTAGAAAAAATGAA+GGG + chr2_1:656672-656691 Msa0186010:intron 25.0%
!!! TTTTACCCTTCATTTTTTCT+AGG - chr2_1:656680-656699 None:intergenic 25.0%
! ACAACACATAAAATTTACCT+TGG - chr2_1:657205-657224 None:intergenic 25.0%
! GTACGTGAAATAAAATGATT+GGG - chr2_1:657274-657293 None:intergenic 25.0%
! CACTAATAATAAAATGTTGG+AGG + chr2_1:657325-657344 Msa0186010:intron 25.0%
! CTAATAATAAAATGTTGGAG+GGG + chr2_1:657327-657346 Msa0186010:intron 25.0%
! TAATAATAAAATGTTGGAGG+GGG + chr2_1:657328-657347 Msa0186010:intron 25.0%
!! ATTGAAGCTATAGAAAGTAT+AGG + chr2_1:657379-657398 Msa0186010:intron 25.0%
!! TTGAAGCTATAGAAAGTATA+GGG + chr2_1:657380-657399 Msa0186010:intron 25.0%
! ATTTCTCAAGAAAAGGAAAA+AGG + chr2_1:657824-657843 Msa0186010:CDS 25.0%
! TTTCTCAAGAAAAGGAAAAA+GGG + chr2_1:657825-657844 Msa0186010:CDS 25.0%
!! TGTTTGTACTAGAAAACTTT+TGG + chr2_1:658263-658282 Msa0186010:intron 25.0%
!!! AATTTGATGAATTTTTCAGG+AGG + chr2_1:658438-658457 Msa0186010:intron 25.0%
!! TATGAGATTTTCTATTATGG+AGG + chr2_1:658561-658580 Msa0186010:CDS 25.0%
!! ATGAGATTTTCTATTATGGA+GGG + chr2_1:658562-658581 Msa0186010:CDS 25.0%
! ATTATTAGTTATCTGTTTCG+TGG + chr2_1:658856-658875 Msa0186010:three_prime_UTR 25.0%
! TTTCTTTTCCAAGAAAACCT+GGG - chr2_1:646895-646914 None:intergenic 30.0%
! TTTTCTTTTCCAAGAAAACC+TGG - chr2_1:646896-646915 None:intergenic 30.0%
AGAAAAGCAAAAATAAGGTC+TGG + chr2_1:646910-646929 Msa0186010:five_prime_UTR 30.0%
GAAGAAACAAACATAAGAAG+TGG - chr2_1:646983-647002 None:intergenic 30.0%
! TATGGATTATATTCTCCACT+AGG + chr2_1:647073-647092 Msa0186010:intron 30.0%
!!! AGGTTTTTTATTTCACCTAG+TGG - chr2_1:647091-647110 None:intergenic 30.0%
GGTGAAATAAAAAACCTACA+CGG + chr2_1:647094-647113 Msa0186010:intron 30.0%
GTGAAATAAAAAACCTACAC+GGG + chr2_1:647095-647114 Msa0186010:intron 30.0%
CAAGTGAGTTTAGATATACA+TGG + chr2_1:647387-647406 Msa0186010:intron 30.0%
TCTAATAAGGTTGGATATGA+CGG + chr2_1:647556-647575 Msa0186010:CDS 30.0%
GATAGTAGATTTGGATAAAG+AGG - chr2_1:647614-647633 None:intergenic 30.0%
!!! TGCTTTTTTAGAATGCCAAA+AGG + chr2_1:647634-647653 Msa0186010:CDS 30.0%
TATATATTGTGCATGAAGGT+TGG + chr2_1:647850-647869 Msa0186010:intron 30.0%
ATATATTGTGCATGAAGGTT+GGG + chr2_1:647851-647870 Msa0186010:intron 30.0%
CTTCTCTTCTTGAAGAAATA+GGG + chr2_1:647890-647909 Msa0186010:CDS 30.0%
AGTTCTTCATAGATACAAAG+AGG + chr2_1:648156-648175 Msa0186010:CDS 30.0%
TTAAGTTCTCTTTACCTGAA+CGG - chr2_1:648285-648304 None:intergenic 30.0%
TCAGGTAAAGAGAACTTAAT+TGG + chr2_1:648286-648305 Msa0186010:intron 30.0%
! TGGTTACTCAACATTCTTTT+TGG - chr2_1:648751-648770 None:intergenic 30.0%
! TCTCTTTTCTTCAATGTTCT+TGG - chr2_1:648771-648790 None:intergenic 30.0%
TGTTGAAACACAGTACAAAA+AGG - chr2_1:649097-649116 None:intergenic 30.0%
TTCCAAGCTTGGATATAAAT+TGG + chr2_1:649153-649172 Msa0186010:intron 30.0%
AACCAATTTATATCCAAGCT+TGG - chr2_1:649158-649177 None:intergenic 30.0%
ATAAATTGGTTGAACTTTGG+AGG + chr2_1:649167-649186 Msa0186010:intron 30.0%
TATATCAACACATGAGCAAT+TGG - chr2_1:649219-649238 None:intergenic 30.0%
! AATTGCTCATGTGTTGATAT+AGG + chr2_1:649218-649237 Msa0186010:intron 30.0%
GTCAGAGAAAAGATTCAAAA+AGG - chr2_1:649260-649279 None:intergenic 30.0%
! TTTGAATCTTTTCTCTGACA+AGG + chr2_1:649261-649280 Msa0186010:intron 30.0%
! TGACTTTCAAGTCCTTTAAA+AGG + chr2_1:649390-649409 Msa0186010:intron 30.0%
CTTTGTAATGTGTGATTGTT+GGG + chr2_1:649684-649703 Msa0186010:intron 30.0%
TTTGTAATGTGTGATTGTTG+GGG + chr2_1:649685-649704 Msa0186010:intron 30.0%
!! AACTTGAGAGAAGTATCTAA+AGG + chr2_1:649839-649858 Msa0186010:intron 30.0%
CCTCAAATATTTCTTAGGAT+TGG - chr2_1:649966-649985 None:intergenic 30.0%
CCAATCCTAAGAAATATTTG+AGG + chr2_1:649963-649982 Msa0186010:intron 30.0%
CTTGAATTTAGCATCTAGAA+TGG + chr2_1:650003-650022 Msa0186010:intron 30.0%
GTTATGTTGAAGAGTGAATA+AGG + chr2_1:650108-650127 Msa0186010:intron 30.0%
AAACTGCAGAAAAGTCTTTA+TGG - chr2_1:650220-650239 None:intergenic 30.0%
TATTCATGAGTATACCAGAA+GGG - chr2_1:650270-650289 None:intergenic 30.0%
GTTAACAATGCATTTCTTCA+TGG - chr2_1:650310-650329 None:intergenic 30.0%
!!! TAAATGCCAGTTTTGAATAG+AGG + chr2_1:650342-650361 Msa0186010:intron 30.0%
GGTATATAGAGTGAAACATA+AGG - chr2_1:650500-650519 None:intergenic 30.0%
GGCTATGAATGATGAATTAA+AGG - chr2_1:650593-650612 None:intergenic 30.0%
!!! GACTGATTTTGATGATGAAA+TGG + chr2_1:650756-650775 Msa0186010:intron 30.0%
ATGTAATCTTTCAAATAGCC+CGG + chr2_1:650793-650812 Msa0186010:intron 30.0%
GTAGATTTATGTATAACAGG+TGG + chr2_1:650832-650851 Msa0186010:intron 30.0%
TAATCCTTCAAATGTCTCAT+GGG - chr2_1:651010-651029 None:intergenic 30.0%
ATAATCCTTCAAATGTCTCA+TGG - chr2_1:651011-651030 None:intergenic 30.0%
GGTTATAAAAGTGGTATGAA+AGG - chr2_1:651117-651136 None:intergenic 30.0%
!! GCAAGAAAGTGTATTTTTCT+TGG - chr2_1:651138-651157 None:intergenic 30.0%
! GCATATGACCAAAAAGTTTT+AGG + chr2_1:651330-651349 Msa0186010:intron 30.0%
!!! ACCAAAAAGTTTTAGGTAAG+TGG + chr2_1:651337-651356 Msa0186010:intron 30.0%
!!! CCAAAAAGTTTTAGGTAAGT+GGG + chr2_1:651338-651357 Msa0186010:intron 30.0%
!! TTGATGCATTTTGACATTTG+GGG - chr2_1:651693-651712 None:intergenic 30.0%
GTCAAAATGCATCAATTCAA+AGG + chr2_1:651698-651717 Msa0186010:intron 30.0%
!! TCAGCTTTATTACAACTTTC+AGG + chr2_1:651726-651745 Msa0186010:intron 30.0%
! TAAGGACTTCATTCTAGAAA+AGG + chr2_1:651833-651852 Msa0186010:intron 30.0%
AAGAAAACCAAGAAGATGAT+TGG - chr2_1:651993-652012 None:intergenic 30.0%
TTAACTATGGCAAATCAATC+TGG - chr2_1:652161-652180 None:intergenic 30.0%
TCCTAATGGTCATTTAACTA+TGG - chr2_1:652174-652193 None:intergenic 30.0%
ATCTGCTAATCATATTGCAA+AGG - chr2_1:652537-652556 None:intergenic 30.0%
! AAGAACCAAAAGTCTTTTGA+AGG + chr2_1:652558-652577 Msa0186010:intron 30.0%
ATCAAAACTGAATCTTCACT+AGG + chr2_1:652737-652756 Msa0186010:intron 30.0%
! GTTTTACAACATGAAAGACA+AGG - chr2_1:652776-652795 None:intergenic 30.0%
TCTTTCATGTTGTAAAACCA+TGG + chr2_1:652778-652797 Msa0186010:intron 30.0%
! CATGAACAAAATCTTTTCCA+TGG - chr2_1:652798-652817 None:intergenic 30.0%
! CATGGAAAAGATTTTGTTCA+TGG + chr2_1:652796-652815 Msa0186010:intron 30.0%
! GAAAAGATTTTGTTCATGGA+AGG + chr2_1:652800-652819 Msa0186010:intron 30.0%
! ATTTTGTTCATGGAAGGTAA+TGG + chr2_1:652806-652825 Msa0186010:intron 30.0%
TATGCAATTAGATTTCTCAC+TGG - chr2_1:652881-652900 None:intergenic 30.0%
AATCTTCAACTCAGAGTAAA+AGG + chr2_1:653006-653025 Msa0186010:intron 30.0%
! AAGATTTTCTCAAGGAGATT+TGG - chr2_1:653095-653114 None:intergenic 30.0%
! CTGAAAGAAAGATTTTCTCA+AGG - chr2_1:653103-653122 None:intergenic 30.0%
! TGCACAATCCATAATTTTCA+TGG - chr2_1:653152-653171 None:intergenic 30.0%
AGATACAGAATTTACAATCC+AGG + chr2_1:653180-653199 Msa0186010:intron 30.0%
ATGAAGTTTGAATTCGTTGA+CGG - chr2_1:653280-653299 None:intergenic 30.0%
! TCTCTTTTCTTCAATGTTCT+TGG - chr2_1:648771-648790 None:intergenic 30.0%
TGTTGAAACACAGTACAAAA+AGG - chr2_1:649097-649116 None:intergenic 30.0%
! TACTTGCTGACAAAGTTATA+GGG - chr2_1:654190-654209 None:intergenic 30.0%
! ATACTTGCTGACAAAGTTAT+AGG - chr2_1:654191-654210 None:intergenic 30.0%
!!! GTGCCTAAATGATTTTGATT+TGG + chr2_1:654488-654507 Msa0186010:intron 30.0%
ACGCCAAATCAAAATCATTT+AGG - chr2_1:654494-654513 None:intergenic 30.0%
! TTTCTCACTAGTACTAGTTT+AGG + chr2_1:654529-654548 Msa0186010:intron 30.0%
! TTCTCACTAGTACTAGTTTA+GGG + chr2_1:654530-654549 Msa0186010:intron 30.0%
!!! AAAGCTCCCTAAATGTTTTT+TGG + chr2_1:654573-654592 Msa0186010:intron 30.0%
TAAAACTTCAGTTCTATTGG+TGG + chr2_1:654683-654702 Msa0186010:intron 30.0%
TCGACTTTGACTATCAATTA+TGG + chr2_1:654734-654753 Msa0186010:intron 30.0%
ACTTTGACTATCAATTATGG+AGG + chr2_1:654737-654756 Msa0186010:intron 30.0%
! TTTGTTGTCCGACAATAATA+TGG + chr2_1:654989-655008 Msa0186010:intron 30.0%
! ACAATGGTACTCATAGATTT+TGG - chr2_1:655122-655141 None:intergenic 30.0%
ACACACTAATATATAGGCAA+CGG + chr2_1:655287-655306 Msa0186010:intron 30.0%
!! TTTTTGTGAAAATTCGGGTT+GGG - chr2_1:655346-655365 None:intergenic 30.0%
! ATTTTTGTGAAAATTCGGGT+TGG - chr2_1:655347-655366 None:intergenic 30.0%
! AGTTTAGTTTAGTTGGGTTT+CGG + chr2_1:655501-655520 Msa0186010:intron 30.0%
! GTATAGGTTTGCTTTGAATT+TGG - chr2_1:655533-655552 None:intergenic 30.0%
AATGTATAGCTCTTCAATGA+AGG - chr2_1:655677-655696 None:intergenic 30.0%
TTGACTCATTCTTACATGAA+CGG - chr2_1:655756-655775 None:intergenic 30.0%
CAATCCAATCTCAAATACAT+GGG + chr2_1:655979-655998 Msa0186010:intron 30.0%
! AATTCCCATGTATTTGAGAT+TGG - chr2_1:655986-656005 None:intergenic 30.0%
AATCTCAAATACATGGGAAT+TGG + chr2_1:655985-656004 Msa0186010:intron 30.0%
! TTTACATGTGAGTTTTCCAA+TGG + chr2_1:656398-656417 Msa0186010:intron 30.0%
!! TGAAGTATTGGTATCTGATA+CGG - chr2_1:656479-656498 None:intergenic 30.0%
TATCAGATACCAATACTTCA+CGG + chr2_1:656479-656498 Msa0186010:intron 30.0%
! TAAGTATCTTGGTGTATATG+TGG - chr2_1:656634-656653 None:intergenic 30.0%
GACAATGATGTGAAATTCAA+TGG + chr2_1:656706-656725 Msa0186010:intron 30.0%
TTCTATAAAACAGTGGTTTC+TGG + chr2_1:657091-657110 Msa0186010:intron 30.0%
! GTAATGAAATGGGAATGTTT+TGG + chr2_1:657127-657146 Msa0186010:intron 30.0%
CTATTATATAGTTGCATGCA+TGG + chr2_1:657150-657169 Msa0186010:intron 30.0%
GGAATATACTTGAAATTCCA+AGG + chr2_1:657185-657204 Msa0186010:intron 30.0%
CGTACGTGAAATAAAATGAT+TGG - chr2_1:657275-657294 None:intergenic 30.0%
TGAAAGCGAAAGTTAATTGT+TGG + chr2_1:657295-657314 Msa0186010:intron 30.0%
AATAATAAAATGTTGGAGGG+GGG + chr2_1:657329-657348 Msa0186010:intron 30.0%
CTCATTCGGCATATAATAAT+TGG + chr2_1:657407-657426 Msa0186010:intron 30.0%
! TTTTGTTGAATGTGTGTACA+TGG - chr2_1:657482-657501 None:intergenic 30.0%
ATTGGAATTTGTATTACCGT+GGG - chr2_1:657918-657937 None:intergenic 30.0%
AATTGGAATTTGTATTACCG+TGG - chr2_1:657919-657938 None:intergenic 30.0%
GCATGTTGTGTGATATTAAT+TGG - chr2_1:657936-657955 None:intergenic 30.0%
! ATCCTGACTGGAATAATTTT+TGG + chr2_1:658065-658084 Msa0186010:intron 30.0%
! ATAATTGGTTCATCAATCAG+AGG + chr2_1:658512-658531 Msa0186010:CDS 30.0%
GAAAATCTCATATCTTCAGA+TGG - chr2_1:658553-658572 None:intergenic 30.0%
TCATGGATATGATATTAGCT+AGG + chr2_1:658695-658714 Msa0186010:three_prime_UTR 30.0%
ATATGATATTAGCTAGGCTT+CGG + chr2_1:658701-658720 Msa0186010:three_prime_UTR 30.0%
GAAAAATTAACATAGGGCAT+AGG - chr2_1:658758-658777 None:intergenic 30.0%
CGGTTCGAAAAATTAACATA+GGG - chr2_1:658764-658783 None:intergenic 30.0%
!! CCTATGTTAATTTTTCGAAC+CGG + chr2_1:658762-658781 Msa0186010:three_prime_UTR 30.0%
! AATTTGAAGTTTCTTGCTAG+AGG + chr2_1:658952-658971 Msa0186010:three_prime_UTR 30.0%
!!! TTTTAGATGATGATTAGCCT+TGG + chr2_1:658982-659001 Msa0186010:three_prime_UTR 30.0%
! TTCTTTTCCAAGAAAACCTG+GGG - chr2_1:646894-646913 None:intergenic 35.0%
ACAAACATAAGAAGTGGGAA+AGG - chr2_1:646977-646996 None:intergenic 35.0%
CAGTCAAACAAAAGGAGATT+AGG - chr2_1:647276-647295 None:intergenic 35.0%
TTGACTCAATGTTAACTGAC+AGG - chr2_1:647370-647389 None:intergenic 35.0%
GTAAAAGGACATTCAACTTG+TGG - chr2_1:647423-647442 None:intergenic 35.0%
! AGTTGAATGTCCTTTTACAG+TGG + chr2_1:647425-647444 Msa0186010:intron 35.0%
! GTTGAATGTCCTTTTACAGT+GGG + chr2_1:647426-647445 Msa0186010:intron 35.0%
TCAATATGACCCACTGTAAA+AGG - chr2_1:647438-647457 None:intergenic 35.0%
TTTACAGTGGGTCATATTGA+TGG + chr2_1:647438-647457 Msa0186010:intron 35.0%
GTTTATTCTTATTCTGCTGC+TGG + chr2_1:647471-647490 Msa0186010:five_prime_UTR 35.0%
ACAACCAATCGGATCTAATA+AGG + chr2_1:647543-647562 Msa0186010:CDS 35.0%
TATATTGTGCATGAAGGTTG+GGG + chr2_1:647852-647871 Msa0186010:intron 35.0%
GCTTCTCTTCTTGAAGAAAT+AGG + chr2_1:647889-647908 Msa0186010:CDS 35.0%
!!! TCTCACGGAAAGCATTATTT+TGG - chr2_1:647927-647946 None:intergenic 35.0%
AATAATGCTTTCCGTGAGAT+AGG + chr2_1:647928-647947 Msa0186010:CDS 35.0%
AATATACCATGAAGTGGTCA+AGG - chr2_1:647966-647985 None:intergenic 35.0%
ACAACTAAACGAACTTTGCA+AGG + chr2_1:648231-648250 Msa0186010:CDS 35.0%
CAACTAAACGAACTTTGCAA+GGG + chr2_1:648232-648251 Msa0186010:CDS 35.0%
AACTAAACGAACTTTGCAAG+GGG + chr2_1:648233-648252 Msa0186010:CDS 35.0%
TTTACCTGAACGGTTGTAAT+CGG - chr2_1:648275-648294 None:intergenic 35.0%
AGTAGCAAATCTTTCCATTG+AGG + chr2_1:648542-648561 Msa0186010:intron 35.0%
TCCTTCGAATTTAAATGCCT+TGG + chr2_1:648624-648643 Msa0186010:intron 35.0%
CCTTCGAATTTAAATGCCTT+GGG + chr2_1:648625-648644 Msa0186010:intron 35.0%
GTGTATCAACCCTATTACAT+TGG + chr2_1:648898-648917 Msa0186010:intron 35.0%
TGTTAGGGTCCAATGTAATA+GGG - chr2_1:648910-648929 None:intergenic 35.0%
ATGTTAGGGTCCAATGTAAT+AGG - chr2_1:648911-648930 None:intergenic 35.0%
CCTAGTTTATAGGGATGTTA+GGG - chr2_1:648925-648944 None:intergenic 35.0%
TCCTAGTTTATAGGGATGTT+AGG - chr2_1:648926-648945 None:intergenic 35.0%
ATTATTGAATGATGAGCAGC+AGG - chr2_1:649063-649082 None:intergenic 35.0%
TTTATCATGGTCAAGCTTGT+GGG - chr2_1:649124-649143 None:intergenic 35.0%
ATTTATCATGGTCAAGCTTG+TGG - chr2_1:649125-649144 None:intergenic 35.0%
TTGATATAGGAAGAAGTCTG+AGG + chr2_1:649231-649250 Msa0186010:intron 35.0%
TTTGTCCTTTCATGGAAAAC+TGG + chr2_1:649305-649324 Msa0186010:intron 35.0%
TAGGTTCTTCACTCATATCT+TGG - chr2_1:649511-649530 None:intergenic 35.0%
! ACTGGATTCTGCTTCTTTTT+AGG - chr2_1:649530-649549 None:intergenic 35.0%
AGATACCTTAAGAACAATCC+TGG - chr2_1:649647-649666 None:intergenic 35.0%
GCTTTGTAATGTGTGATTGT+TGG + chr2_1:649683-649702 Msa0186010:intron 35.0%
TAGCAAGACACATCTTCAAA+AGG + chr2_1:649797-649816 Msa0186010:intron 35.0%
TTGGATTTACTCGATTCTTC+TGG - chr2_1:649893-649912 None:intergenic 35.0%
CTCTCAAAGGAAATATTGCT+TGG - chr2_1:649912-649931 None:intergenic 35.0%
GGGATCCTCAAATATTTCTT+AGG - chr2_1:649971-649990 None:intergenic 35.0%
GAATAAGGAGTAATCAGATG+TGG + chr2_1:650123-650142 Msa0186010:intron 35.0%
TGAAACAAGCAAGCAGAAAA+TGG - chr2_1:650195-650214 None:intergenic 35.0%
ATTCATGAGTATACCAGAAG+GGG - chr2_1:650269-650288 None:intergenic 35.0%
GTATTCATGAGTATACCAGA+AGG - chr2_1:650271-650290 None:intergenic 35.0%
CTATTGCCTCTATTCAAAAC+TGG - chr2_1:650351-650370 None:intergenic 35.0%
AATAGAGGCAATAGCAAGAA+GGG + chr2_1:650357-650376 Msa0186010:intron 35.0%
!! AAGGGTTACAATCAAGTTGA+GGG - chr2_1:650436-650455 None:intergenic 35.0%
! TAAGGGTTACAATCAAGTTG+AGG - chr2_1:650437-650456 None:intergenic 35.0%
TATACCCATTTACTGCCAAT+TGG + chr2_1:650514-650533 Msa0186010:intron 35.0%
!! TTAAAGGCATTGACTGCTAA+TGG - chr2_1:650577-650596 None:intergenic 35.0%
! TCAGTCTGAACATTGGTTAA+AGG - chr2_1:650614-650633 None:intergenic 35.0%
! CATGCCTCTTTATAGGTTTT+AGG + chr2_1:650634-650653 Msa0186010:intron 35.0%
TGAGCCTAAAACCTATAAAG+AGG - chr2_1:650641-650660 None:intergenic 35.0%
TCATCAAAATCAGTCAACTC+AGG - chr2_1:650751-650770 None:intergenic 35.0%
TGTAATCTTTCAAATAGCCC+GGG + chr2_1:650794-650813 Msa0186010:intron 35.0%
TTTATGTATAACAGGTGGTG+AGG + chr2_1:650837-650856 Msa0186010:intron 35.0%
TTATGTATAACAGGTGGTGA+GGG + chr2_1:650838-650857 Msa0186010:intron 35.0%
TATTCCCATGAGACATTTGA+AGG + chr2_1:651003-651022 Msa0186010:intron 35.0%
! TTGATTGTTTAAAATGGGGC+TGG + chr2_1:651272-651291 Msa0186010:intron 35.0%
! TGATTGTTTAAAATGGGGCT+GGG + chr2_1:651273-651292 Msa0186010:intron 35.0%
TGCAGTCTTCATCATGAATA+GGG - chr2_1:651301-651320 None:intergenic 35.0%
ATGCAGTCTTCATCATGAAT+AGG - chr2_1:651302-651321 None:intergenic 35.0%
! CCCACTTACCTAAAACTTTT+TGG - chr2_1:651341-651360 None:intergenic 35.0%
!! CCTCAGTTTTATGCTTCTAA+AGG - chr2_1:651468-651487 None:intergenic 35.0%
! CCTTTAGAAGCATAAAACTG+AGG + chr2_1:651465-651484 Msa0186010:intron 35.0%
AACTGAGGCATATTGAATTC+AGG + chr2_1:651480-651499 Msa0186010:intron 35.0%
ACTGAGGCATATTGAATTCA+GGG + chr2_1:651481-651500 Msa0186010:intron 35.0%
AAAAGGAAACTGAGACTGTA+AGG + chr2_1:651815-651834 Msa0186010:intron 35.0%
! ACCTAGTCTAAAATGCCAAA+GGG + chr2_1:651863-651882 Msa0186010:intron 35.0%
!! GATTGGTTCTGGTGATAAAA+GGG - chr2_1:651976-651995 None:intergenic 35.0%
!! TGATTGGTTCTGGTGATAAA+AGG - chr2_1:651977-651996 None:intergenic 35.0%
TCTTGTCCTGAATAAAACAC+TGG + chr2_1:652009-652028 Msa0186010:intron 35.0%
!! TGGTTTCCAGTGTTTTATTC+AGG - chr2_1:652018-652037 None:intergenic 35.0%
GCCATAGTTAAATGACCATT+AGG + chr2_1:652170-652189 Msa0186010:intron 35.0%
!! AGTTCTTGGATCATTGATTC+AGG - chr2_1:652272-652291 None:intergenic 35.0%
CAGAATTCATCTCTTAACCA+AGG - chr2_1:652413-652432 None:intergenic 35.0%
TATTGCTCATGTGTAATAGC+TGG + chr2_1:652455-652474 Msa0186010:intron 35.0%
TGCTAATCATATTGCAAAGG+AGG - chr2_1:652534-652553 None:intergenic 35.0%
! ACGTACACCATGTTTAGAAT+TGG + chr2_1:652652-652671 Msa0186010:intron 35.0%
CAAGGAACCAATTCTAAACA+TGG - chr2_1:652662-652681 None:intergenic 35.0%
!! CTCTGAGTTGAAGATTTTGT+GGG - chr2_1:653002-653021 None:intergenic 35.0%
!! ACTCTGAGTTGAAGATTTTG+TGG - chr2_1:653003-653022 None:intergenic 35.0%
TGGAAAATGCATGTGATGTT+TGG - chr2_1:653132-653151 None:intergenic 35.0%
GGATCAAAATCATCAGTGAT+AGG + chr2_1:653244-653263 Msa0186010:intron 35.0%
GAAGAAAGGACTAGATTGAT+CGG + chr2_1:653405-653424 Msa0186010:intron 35.0%
ATGTTCTTGGTTACTCAACA+TGG - chr2_1:648758-648777 None:intergenic 35.0%
GTGTATCAACCCTATTACAT+TGG + chr2_1:648898-648917 Msa0186010:intron 35.0%
TGTTAGGGTCCAATGTAATA+GGG - chr2_1:648910-648929 None:intergenic 35.0%
ATGTTAGGGTCCAATGTAAT+AGG - chr2_1:648911-648930 None:intergenic 35.0%
CCTAGTTTATAGGGATGTTA+GGG - chr2_1:648925-648944 None:intergenic 35.0%
TCCTAGTTTATAGGGATGTT+AGG - chr2_1:648926-648945 None:intergenic 35.0%
ATTATTGAATGATGAGCAGC+AGG - chr2_1:649063-649082 None:intergenic 35.0%
!! AATCCTACTTTAGAGTCACT+TGG - chr2_1:653903-653922 None:intergenic 35.0%
! ACTTGCTGACAAAGTTATAG+GGG - chr2_1:654189-654208 None:intergenic 35.0%
! TTTTGGTACCCCTGAAAATA+TGG + chr2_1:654278-654297 Msa0186010:intron 35.0%
AAGTGTATCTCATTTAGCTG+TGG - chr2_1:654341-654360 None:intergenic 35.0%
TTTAGGCTCACACACATAAA+AGG + chr2_1:654389-654408 Msa0186010:intron 35.0%
TTAGGCTCACACACATAAAA+GGG + chr2_1:654390-654409 Msa0186010:intron 35.0%
! GGGAAAAGTATGAAATAGCA+AGG + chr2_1:654410-654429 Msa0186010:intron 35.0%
! CGTAACAACGTATTTTCTAG+AGG + chr2_1:654626-654645 Msa0186010:intron 35.0%
!! ACAACGTATTTTCTAGAGGA+AGG + chr2_1:654630-654649 Msa0186010:intron 35.0%
ACTTACATGCTCTTTGTGAA+AGG + chr2_1:654659-654678 Msa0186010:intron 35.0%
CTTACATGCTCTTTGTGAAA+GGG + chr2_1:654660-654679 Msa0186010:intron 35.0%
GGGTAAAACTTCAGTTCTAT+TGG + chr2_1:654680-654699 Msa0186010:intron 35.0%
CTGTCTCGTAAACAGAAAAT+AGG - chr2_1:654769-654788 None:intergenic 35.0%
CTACACAGTATCTGAAAGAA+AGG - chr2_1:654817-654836 None:intergenic 35.0%
TCAGCCACACACTAATATAT+AGG + chr2_1:655281-655300 Msa0186010:intron 35.0%
GTTGCCTATATATTAGTGTG+TGG - chr2_1:655288-655307 None:intergenic 35.0%
CACACTAATATATAGGCAAC+GGG + chr2_1:655288-655307 Msa0186010:intron 35.0%
ACACTAATATATAGGCAACG+GGG + chr2_1:655289-655308 Msa0186010:intron 35.0%
!!! TTTTGTGAAAATTCGGGTTG+GGG - chr2_1:655345-655364 None:intergenic 35.0%
AAGAAATTGAATGTGGGTCT+CGG - chr2_1:655470-655489 None:intergenic 35.0%
AGACCCACATTCAATTTCTT+TGG + chr2_1:655470-655489 Msa0186010:intron 35.0%
! GTTTAGTTTAGTTGGGTTTC+GGG + chr2_1:655502-655521 Msa0186010:intron 35.0%
! TTTAGTTTAGTTGGGTTTCG+GGG + chr2_1:655503-655522 Msa0186010:intron 35.0%
! GAAGGTTGACTTAATTGACA+AGG - chr2_1:655659-655678 None:intergenic 35.0%
TGACTCATTCTTACATGAAC+GGG - chr2_1:655755-655774 None:intergenic 35.0%
! ATAGTGGAGTTTCCCTTAAA+CGG + chr2_1:655807-655826 Msa0186010:intron 35.0%
! CCATGTATTTGAGATTGGAT+TGG - chr2_1:655981-656000 None:intergenic 35.0%
CCAATCCAATCTCAAATACA+TGG + chr2_1:655978-655997 Msa0186010:intron 35.0%
!! CCTAAGAGTACTTATGGAAT+GGG - chr2_1:656095-656114 None:intergenic 35.0%
CCATTCCATAAGTACTCTTA+GGG + chr2_1:656093-656112 Msa0186010:intron 35.0%
AGTACTATGTATGAGATCCT+GGG + chr2_1:656230-656249 Msa0186010:intron 35.0%
GATGCATACACATAACACTA+GGG - chr2_1:656311-656330 None:intergenic 35.0%
TGATGCATACACATAACACT+AGG - chr2_1:656312-656331 None:intergenic 35.0%
GTCAGTTGAGTTAAGACTTA+TGG - chr2_1:656371-656390 None:intergenic 35.0%
GAAGAAACAACATTAGCCAT+TGG - chr2_1:656417-656436 None:intergenic 35.0%
!! GAAGTATTGGTATCTGATAC+GGG - chr2_1:656478-656497 None:intergenic 35.0%
GAAAAGAGTAATTCACTGCT+AGG - chr2_1:657020-657039 None:intergenic 35.0%
! TTTTCTTCCTTTCCATGACA+AGG + chr2_1:657035-657054 Msa0186010:intron 35.0%
TCCCTACTCAAGTAATGAAA+TGG + chr2_1:657116-657135 Msa0186010:intron 35.0%
CCCATTTCATTACTTGAGTA+GGG - chr2_1:657120-657139 None:intergenic 35.0%
CCCTACTCAAGTAATGAAAT+GGG + chr2_1:657117-657136 Msa0186010:intron 35.0%
TCCCATTTCATTACTTGAGT+AGG - chr2_1:657121-657140 None:intergenic 35.0%
ATAATAAAATGTTGGAGGGG+GGG + chr2_1:657330-657349 Msa0186010:intron 35.0%
TCGTGATCTAACCCAAAAAA+AGG - chr2_1:657645-657664 None:intergenic 35.0%
!!! TTTTTTTGGGTTAGATCACG+AGG + chr2_1:657644-657663 Msa0186010:intron 35.0%
TCTTTAAGCTCTTTATCACC+TGG - chr2_1:657756-657775 None:intergenic 35.0%
TTACCTTAGCAACTTAAGAC+AGG + chr2_1:657800-657819 Msa0186010:CDS 35.0%
! ATTCCTGTCTTAAGTTGCTA+AGG - chr2_1:657806-657825 None:intergenic 35.0%
GACAGGAATTTCTCAAGAAA+AGG + chr2_1:657817-657836 Msa0186010:CDS 35.0%
GAAAAAGGGTAAACTACCAA+AGG + chr2_1:657839-657858 Msa0186010:CDS 35.0%
! AATGCTTTTCTTGCATCCTT+TGG - chr2_1:657858-657877 None:intergenic 35.0%
!! CAAGAAAAGCATTGATGGAT+TGG + chr2_1:657865-657884 Msa0186010:CDS 35.0%
ATTTGTATTACCGTGGGATA+AGG - chr2_1:657912-657931 None:intergenic 35.0%
AATTTCCTCGAATCATTCGT+TGG - chr2_1:658036-658055 None:intergenic 35.0%
! ATTTGAGTTCAAATCCTGAC+TGG + chr2_1:658053-658072 Msa0186010:intron 35.0%
GACCAAAAATTATTCCAGTC+AGG - chr2_1:658070-658089 None:intergenic 35.0%
TTTAACTCTCAACTGAACTC+CGG + chr2_1:658098-658117 Msa0186010:intron 35.0%
TCCTTCATTTGGAAACAGAA+GGG + chr2_1:658133-658152 Msa0186010:intron 35.0%
! TAACACCAACAAAATGGACT+AGG - chr2_1:658236-658255 None:intergenic 35.0%
ACACTGTAACACCAACAAAA+TGG - chr2_1:658242-658261 None:intergenic 35.0%
! GTACTAGAAAACTTTTGGCA+TGG + chr2_1:658268-658287 Msa0186010:intron 35.0%
CAAATGCAAGTTAAGCTTGT+TGG - chr2_1:658313-658332 None:intergenic 35.0%
!! GCTTAACTTGCATTTGCAAA+AGG + chr2_1:658317-658336 Msa0186010:intron 35.0%
TGGAATTGACGTTGTTATCT+TGG - chr2_1:658355-658374 None:intergenic 35.0%
AGCAAAGAAGCTTGACAAAA+TGG - chr2_1:658375-658394 None:intergenic 35.0%
!!! TTGATGAATTTTTCAGGAGG+AGG + chr2_1:658441-658460 Msa0186010:intron 35.0%
CCTGCAGAATAAATTTACAG+AGG - chr2_1:658613-658632 None:intergenic 35.0%
CCTCTGTAAATTTATTCTGC+AGG + chr2_1:658610-658629 Msa0186010:exon 35.0%
CTGTAAATTTATTCTGCAGG+TGG + chr2_1:658613-658632 Msa0186010:exon 35.0%
TCCATGACATTCAAGCAAAA+GGG - chr2_1:658682-658701 None:intergenic 35.0%
ATCCATGACATTCAAGCAAA+AGG - chr2_1:658683-658702 None:intergenic 35.0%
! CCGGTTCGAAAAATTAACAT+AGG - chr2_1:658765-658784 None:intergenic 35.0%
!! ATGATGATTAGCCTTGGATT+TGG + chr2_1:658988-659007 Msa0186010:three_prime_UTR 35.0%
!! AATAAGGTCTGGTCTTTTCC+AGG + chr2_1:646921-646940 Msa0186010:five_prime_UTR 40.0%
AAAGGAAAGAGTGGAAAGCT+GGG - chr2_1:646959-646978 None:intergenic 40.0%
CTGGTAAGCAGTCAAACAAA+AGG - chr2_1:647284-647303 None:intergenic 40.0%
ATTGGTTGTGTTCCATGTGA+AGG - chr2_1:647532-647551 None:intergenic 40.0%
TCACATGGAACACAACCAAT+CGG + chr2_1:647532-647551 Msa0186010:exon 40.0%
CCAACCTTATTAGATCCGAT+TGG - chr2_1:647550-647569 None:intergenic 40.0%
CCAATCGGATCTAATAAGGT+TGG + chr2_1:647547-647566 Msa0186010:CDS 40.0%
AGAAGAGAAGCAAGTTCTGT+TGG - chr2_1:647880-647899 None:intergenic 40.0%
!!! CACGGAAAGCATTATTTTGG+TGG - chr2_1:647924-647943 None:intergenic 40.0%
GAAAAAGTCCTGAACATGAG+TGG + chr2_1:648406-648425 Msa0186010:intron 40.0%
GTTCTTTAACTGCTAGTAGC+AGG + chr2_1:648504-648523 Msa0186010:intron 40.0%
TGCTAACTTAAGAGGACAGA+TGG - chr2_1:648580-648599 None:intergenic 40.0%
ACTAGCAGTGCTAACTTAAG+AGG - chr2_1:648588-648607 None:intergenic 40.0%
TGCTAGTAATGAGATCAAGC+TGG + chr2_1:648601-648620 Msa0186010:intron 40.0%
! CCCAAGGCATTTAAATTCGA+AGG - chr2_1:648628-648647 None:intergenic 40.0%
CCCTAACATCCCTATAAACT+AGG + chr2_1:648922-648941 Msa0186010:intron 40.0%
ACTTGCAGTGCAAGTAACTA+AGG + chr2_1:648993-649012 Msa0186010:intron 40.0%
!! TTGAACTTTGGAGGTGCTAA+AGG + chr2_1:649176-649195 Msa0186010:intron 40.0%
! CCATGAAAGGACAAAGCATT+TGG - chr2_1:649300-649319 None:intergenic 40.0%
CCAAATGCTTTGTCCTTTCA+TGG + chr2_1:649297-649316 Msa0186010:intron 40.0%
! CCAATCCAGTTTTCCATGAA+AGG - chr2_1:649313-649332 None:intergenic 40.0%
CCTTTCATGGAAAACTGGAT+TGG + chr2_1:649310-649329 Msa0186010:intron 40.0%
TGACTGTCACAATACATGAC+TGG + chr2_1:649353-649372 Msa0186010:intron 40.0%
TTCAGAGGAAGATCTGGAAA+TGG + chr2_1:649466-649485 Msa0186010:intron 40.0%
GAATCCAGTTGTTGATCTTC+TGG + chr2_1:649541-649560 Msa0186010:intron 40.0%
GATTCCAGAAGATCAACAAC+TGG - chr2_1:649548-649567 None:intergenic 40.0%
AGTTCAGAGAAGCAACTACT+GGG - chr2_1:649602-649621 None:intergenic 40.0%
AAGTTCAGAGAAGCAACTAC+TGG - chr2_1:649603-649622 None:intergenic 40.0%
AGTTGCTTCTCTGAACTTCT+AGG + chr2_1:649605-649624 Msa0186010:intron 40.0%
GTTGCTTCTCTGAACTTCTA+GGG + chr2_1:649606-649625 Msa0186010:intron 40.0%
CTTAAGAACAATCCTGGTCT+TGG - chr2_1:649641-649660 None:intergenic 40.0%
CAAGACCAGGATTGTTCTTA+AGG + chr2_1:649639-649658 Msa0186010:intron 40.0%
TTGTTGGGGAATTCAGAAAC+TGG + chr2_1:649699-649718 Msa0186010:intron 40.0%
TGTGTAGCTAAAGAGATGTC+AGG + chr2_1:649731-649750 Msa0186010:intron 40.0%
TTGAAGATGTGTCTTGCTAC+AGG - chr2_1:649796-649815 None:intergenic 40.0%
!! GTATCTAAAGGTGTTGATGC+AGG + chr2_1:649851-649870 Msa0186010:intron 40.0%
!! CTCGATTCTTCTGGTCTTTT+AGG - chr2_1:649884-649903 None:intergenic 40.0%
!! GTTGATGACATCATATTGGC+TGG - chr2_1:650061-650080 None:intergenic 40.0%
! ACTGCTTTGTTGCTTCATGA+AGG - chr2_1:650160-650179 None:intergenic 40.0%
! TCTTCATGGTGATTTGCAAG+AGG - chr2_1:650296-650315 None:intergenic 40.0%
GAATAGAGGCAATAGCAAGA+AGG + chr2_1:650356-650375 Msa0186010:intron 40.0%
! AAAGCCAGATTGGTAGCTAA+GGG - chr2_1:650454-650473 None:intergenic 40.0%
! TGAAAGGTACAAAGCCAGAT+TGG - chr2_1:650464-650483 None:intergenic 40.0%
AGAGTGAAACATAAGGCAGA+TGG - chr2_1:650493-650512 None:intergenic 40.0%
GAAGCCAATTGGCAGTAAAT+GGG - chr2_1:650521-650540 None:intergenic 40.0%
TGAAGCCAATTGGCAGTAAA+TGG - chr2_1:650522-650541 None:intergenic 40.0%
ATTGGGTGGTAAATCCACAA+TGG + chr2_1:650543-650562 Msa0186010:intron 40.0%
AGACTGACATGCCTCTTTAT+AGG + chr2_1:650627-650646 Msa0186010:intron 40.0%
GTAATCTTTCAAATAGCCCG+GGG + chr2_1:650795-650814 Msa0186010:intron 40.0%
! AGTGGAAGATGATGGTTCAT+TGG + chr2_1:650882-650901 Msa0186010:intron 40.0%
GAAGGAGGAGTTTCAATAAC+AGG + chr2_1:650946-650965 Msa0186010:intron 40.0%
AGCTTATGCATCAACTCTTC+AGG - chr2_1:651187-651206 None:intergenic 40.0%
! TTTCCACCCTTGCATTTTGT+TGG + chr2_1:651409-651428 Msa0186010:intron 40.0%
! TTCCACCCTTGCATTTTGTT+GGG + chr2_1:651410-651429 Msa0186010:intron 40.0%
AACACCCCAACAAAATGCAA+GGG - chr2_1:651418-651437 None:intergenic 40.0%
AAACACCCCAACAAAATGCA+AGG - chr2_1:651419-651438 None:intergenic 40.0%
!! TGTGTCACTTTGCTAAACAC+AGG - chr2_1:651764-651783 None:intergenic 40.0%
! GACCTAGTCTAAAATGCCAA+AGG + chr2_1:651862-651881 Msa0186010:intron 40.0%
TATCTGGTAAAGGAGCAAAG+TGG + chr2_1:651889-651908 Msa0186010:intron 40.0%
ATCTGGTAAAGGAGCAAAGT+GGG + chr2_1:651890-651909 Msa0186010:intron 40.0%
ACCAGAACCAATCATCTTCT+TGG + chr2_1:651983-652002 Msa0186010:intron 40.0%
! ACCAAGAAGATGATTGGTTC+TGG - chr2_1:651987-652006 None:intergenic 40.0%
GTTTCTTCTTCCATGTCTCT+TGG - chr2_1:652362-652381 None:intergenic 40.0%
AACTGCACATGCTTCTAATC+AGG - chr2_1:652384-652403 None:intergenic 40.0%
! CATGTGCAGTTTTTGAACCT+TGG + chr2_1:652393-652412 Msa0186010:intron 40.0%
TTGCTATCACCACATGATGA+AGG + chr2_1:652488-652507 Msa0186010:intron 40.0%
! CCTCACCTTCAAAAGACTTT+TGG - chr2_1:652566-652585 None:intergenic 40.0%
!! CCAAAAGTCTTTTGAAGGTG+AGG + chr2_1:652563-652582 Msa0186010:intron 40.0%
!! AAAGTCTTTTGAAGGTGAGG+TGG + chr2_1:652566-652585 Msa0186010:intron 40.0%
!! GAAACTTGTTGGCAGAAACA+TGG - chr2_1:652596-652615 None:intergenic 40.0%
ATCACACTGTGGAAACTTGT+TGG - chr2_1:652607-652626 None:intergenic 40.0%
TGGTAGAAAGAATCACACTG+TGG - chr2_1:652618-652637 None:intergenic 40.0%
!! GTACGTGTGTGTACTTTTTG+TGG - chr2_1:652638-652657 None:intergenic 40.0%
TCTGGCAAATCACAATCTCA+AGG - chr2_1:652680-652699 None:intergenic 40.0%
AAGTACAAGGGAGATTCTTC+TGG - chr2_1:652698-652717 None:intergenic 40.0%
AGAATCTCCCTTGTACTTTC+TGG + chr2_1:652700-652719 Msa0186010:intron 40.0%
! GCTGATTCCAGAAAGTACAA+GGG - chr2_1:652710-652729 None:intergenic 40.0%
!! TGCTGATTCCAGAAAGTACA+AGG - chr2_1:652711-652730 None:intergenic 40.0%
!! TGAGTTGAAGATTTTGTGGG+AGG - chr2_1:652999-653018 None:intergenic 40.0%
GTAAAAGGCAGTTACAGACT+TGG + chr2_1:653021-653040 Msa0186010:intron 40.0%
AAGTTGTTGCAACGATTCCA+AGG + chr2_1:653211-653230 Msa0186010:intron 40.0%
CGGTTCAAACTATCATTCCT+GGG - chr2_1:653335-653354 None:intergenic 40.0%
ACGGTTCAAACTATCATTCC+TGG - chr2_1:653336-653355 None:intergenic 40.0%
TAGTTTGAACCGTCCAAAAC+TGG + chr2_1:653343-653362 Msa0186010:intron 40.0%
!!! ACTGTTTCTCCAGTTTTGGA+CGG - chr2_1:653355-653374 None:intergenic 40.0%
!! TGTCACTGTTTCTCCAGTTT+TGG - chr2_1:653359-653378 None:intergenic 40.0%
TTCTTCGTTCATCCTAGTGA+TGG - chr2_1:653391-653410 None:intergenic 40.0%
TCACTAGGATGAACGAAGAA+AGG + chr2_1:653391-653410 Msa0186010:intron 40.0%
CCCTAACATCCCTATAAACT+AGG + chr2_1:648922-648941 Msa0186010:intron 40.0%
ACTTGCAGTGCAAGTAACTA+AGG + chr2_1:648993-649012 Msa0186010:intron 40.0%
!! GAACCAAGTGACTCTAAAGT+AGG + chr2_1:653897-653916 Msa0186010:intron 40.0%
CTTGATCCAAAGTCTACACT+CGG + chr2_1:653923-653942 Msa0186010:intron 40.0%
TAATTGCAGTGCCTCAATTG+TGG - chr2_1:654069-654088 None:intergenic 40.0%
!! ACGTATTTTCTAGAGGAAGG+AGG + chr2_1:654633-654652 Msa0186010:intron 40.0%
TATATTAGTGTGTGGCTGAG+TGG - chr2_1:655280-655299 None:intergenic 40.0%
TAATATATAGGCAACGGGGT+GGG + chr2_1:655293-655312 Msa0186010:intron 40.0%
!! TTTGTGAAAATTCGGGTTGG+GGG - chr2_1:655344-655363 None:intergenic 40.0%
TTTCAAACCCGGCAAAGTTT+GGG - chr2_1:655382-655401 None:intergenic 40.0%
! TTTTCAAACCCGGCAAAGTT+TGG - chr2_1:655383-655402 None:intergenic 40.0%
!! TGCGTGCTTATTTTCAAACC+CGG - chr2_1:655393-655412 None:intergenic 40.0%
! CGGAATTTTCTTGATAGGAG+CGG - chr2_1:655450-655469 None:intergenic 40.0%
! GGTCTCGGAATTTTCTTGAT+AGG - chr2_1:655455-655474 None:intergenic 40.0%
CATTCTTACATGAACGGGTA+AGG - chr2_1:655750-655769 None:intergenic 40.0%
! TTAACTTGGCCACATCATAG+TGG + chr2_1:655791-655810 Msa0186010:intron 40.0%
TAGTGGAGTTTCCCTTAAAC+GGG + chr2_1:655808-655827 Msa0186010:intron 40.0%
! ATCATAGAAAGCGCATGTCT+TGG - chr2_1:655932-655951 None:intergenic 40.0%
CCCATTCCATAAGTACTCTT+AGG + chr2_1:656092-656111 Msa0186010:intron 40.0%
!! CCCTAAGAGTACTTATGGAA+TGG - chr2_1:656096-656115 None:intergenic 40.0%
TTCCATAAGTACTCTTAGGG+AGG + chr2_1:656096-656115 Msa0186010:intron 40.0%
!! ATCCTCCCTAAGAGTACTTA+TGG - chr2_1:656101-656120 None:intergenic 40.0%
AGACCATAAGCCACTGAAAT+TGG + chr2_1:656188-656207 Msa0186010:intron 40.0%
GAGTACTATGTATGAGATCC+TGG + chr2_1:656229-656248 Msa0186010:intron 40.0%
TTCTTCTATCCTATGAAGCC+CGG + chr2_1:656431-656450 Msa0186010:intron 40.0%
CAATACTTCACGGATACTCT+CGG + chr2_1:656489-656508 Msa0186010:intron 40.0%
!! TGAAGTATCGGTATCCGATA+CGG - chr2_1:656523-656542 None:intergenic 40.0%
TATCGGATACCGATACTTCA+CGG + chr2_1:656523-656542 Msa0186010:intron 40.0%
TATGATACGACACAGGTACA+CGG - chr2_1:656900-656919 None:intergenic 40.0%
TAGATAGAAGCTATGAAGCC+CGG - chr2_1:656941-656960 None:intergenic 40.0%
! GATATAATGCAGCCTTGTCA+TGG - chr2_1:657050-657069 None:intergenic 40.0%
! CATGCATGGTGAGAATGTTT+TGG + chr2_1:657164-657183 Msa0186010:intron 40.0%
CGTACATACCATGAAAGAGA+TGG + chr2_1:657247-657266 Msa0186010:intron 40.0%
! AAGTATAGGGCTGACTCATT+CGG + chr2_1:657393-657412 Msa0186010:intron 40.0%
TCAGAGGATGAAATGAGTTG+TGG + chr2_1:657678-657697 Msa0186010:CDS 40.0%
GGATGAAATGAGTTGTGGAA+AGG + chr2_1:657683-657702 Msa0186010:CDS 40.0%
GAAATGCTCCTTCGTAAGTA+CGG + chr2_1:657774-657793 Msa0186010:CDS 40.0%
AAATGCTCCTTCGTAAGTAC+GGG + chr2_1:657775-657794 Msa0186010:CDS 40.0%
!! GGATGCAAGAAAAGCATTGA+TGG + chr2_1:657860-657879 Msa0186010:CDS 40.0%
!! GAAAAGCATTGATGGATTGG+TGG + chr2_1:657868-657887 Msa0186010:CDS 40.0%
TTTGTCCAACGAATGATTCG+AGG + chr2_1:658028-658047 Msa0186010:intron 40.0%
TTTCCAAATGAAGGAGACTC+CGG - chr2_1:658128-658147 None:intergenic 40.0%
CTCCTTCATTTGGAAACAGA+AGG + chr2_1:658132-658151 Msa0186010:intron 40.0%
ACCCTTCTGTTTCCAAATGA+AGG - chr2_1:658137-658156 None:intergenic 40.0%
! AGGTTCCTAGTCCATTTTGT+TGG + chr2_1:658228-658247 Msa0186010:intron 40.0%
! AGAAAACTTTTGGCATGGTG+AGG + chr2_1:658273-658292 Msa0186010:intron 40.0%
TCAATCAGAGGAAAAGACAC+TGG + chr2_1:658524-658543 Msa0186010:CDS 40.0%
CTTCTTTCGCAGATTAAGAC+AGG - chr2_1:658655-658674 None:intergenic 40.0%
! ACCCTTTTGCTTGAATGTCA+TGG + chr2_1:658678-658697 Msa0186010:three_prime_UTR 40.0%
!! TCTGGATTGGACTTTTGAGA+TGG - chr2_1:658727-658746 None:intergenic 40.0%
! ATAGGCGTATTGTTCTGGAT+TGG - chr2_1:658740-658759 None:intergenic 40.0%
! TCCTTTTCCCCAGGTTTTCT+TGG + chr2_1:646884-646903 Msa0186010:five_prime_UTR 45.0%
TCCAAGAAAACCTGGGGAAA+AGG - chr2_1:646888-646907 None:intergenic 45.0%
GAAAGGAAAGAGTGGAAAGC+TGG - chr2_1:646960-646979 None:intergenic 45.0%
AGAAGTGGGAAAGGAAAGAG+TGG - chr2_1:646968-646987 None:intergenic 45.0%
GTTTCTTCTCTAGCTAGCTG+AGG + chr2_1:646995-647014 Msa0186010:intron 45.0%
! AGTGGGTCATATTGATGGCA+AGG + chr2_1:647443-647462 Msa0186010:intron 45.0%
CAGGATCATCTCCTATCTCA+CGG - chr2_1:647942-647961 None:intergenic 45.0%
! TGTTGCTTCATTGAAGGGCT+TGG - chr2_1:648188-648207 None:intergenic 45.0%
TCATCCGATTACAACCGTTC+AGG + chr2_1:648268-648287 Msa0186010:CDS 45.0%
! TAAGGTGTAGTGTTAGCCTG+TGG + chr2_1:649011-649030 Msa0186010:intron 45.0%
TCCTCAATTACTTGTGCCAC+AGG - chr2_1:649030-649049 None:intergenic 45.0%
! GTGGCTGCTCTACCTTTTAA+AGG - chr2_1:649405-649424 None:intergenic 45.0%
TGTCAGGTCTAGTAGTGTTC+AGG + chr2_1:649747-649766 Msa0186010:intron 45.0%
AAGATGTGTCTTGCTACAGG+AGG - chr2_1:649793-649812 None:intergenic 45.0%
!! TAAAGGTGTTGATGCAGGCT+TGG + chr2_1:649856-649875 Msa0186010:intron 45.0%
CAGGCATTTCAGTCTCTCAA+AGG - chr2_1:649925-649944 None:intergenic 45.0%
!! GAAGTTGCTCACTCTAAAGC+AGG - chr2_1:649944-649963 None:intergenic 45.0%
ACTGTAGTGAGCTTAGCAAC+AGG + chr2_1:650385-650404 Msa0186010:intron 45.0%
!! TTACAATCAAGTTGAGGGCC+TGG - chr2_1:650431-650450 None:intergenic 45.0%
GTAACCCTTAGCTACCAATC+TGG + chr2_1:650447-650466 Msa0186010:intron 45.0%
! CAAAGCCAGATTGGTAGCTA+AGG - chr2_1:650455-650474 None:intergenic 45.0%
! AGGCAGATGGCTCTATTGAA+AGG - chr2_1:650480-650499 None:intergenic 45.0%
! ACTGCCAATTGGCTTCACAT+TGG + chr2_1:650525-650544 Msa0186010:intron 45.0%
! CTGCCAATTGGCTTCACATT+GGG + chr2_1:650526-650545 Msa0186010:intron 45.0%
TGGTAAATCCACAATGGACC+AGG + chr2_1:650549-650568 Msa0186010:intron 45.0%
TAATGGTACCTGGTCCATTG+TGG - chr2_1:650560-650579 None:intergenic 45.0%
! CATTGACTGCTAATGGTACC+TGG - chr2_1:650570-650589 None:intergenic 45.0%
AGGCATGTCAGTCTGAACAT+TGG - chr2_1:650621-650640 None:intergenic 45.0%
TACAAGAGTCAAATCTGCCC+CGG - chr2_1:650815-650834 None:intergenic 45.0%
! GGAAGATGATGGTTCATTGG+TGG + chr2_1:650885-650904 Msa0186010:intron 45.0%
TCTGACACAGTTTCAGAAGG+AGG + chr2_1:650931-650950 Msa0186010:intron 45.0%
! TCCACCCTTGCATTTTGTTG+GGG + chr2_1:651411-651430 Msa0186010:intron 45.0%
! GCCCTTTGGCATTTTAGACT+AGG - chr2_1:651867-651886 None:intergenic 45.0%
!! AAATGCCAAAGGGCACTATC+TGG + chr2_1:651873-651892 Msa0186010:intron 45.0%
CTTTACCAGATAGTGCCCTT+TGG - chr2_1:651881-651900 None:intergenic 45.0%
!! CAAAGGGCACTATCTGGTAA+AGG + chr2_1:651879-651898 Msa0186010:intron 45.0%
TCTGGTAAAGGAGCAAAGTG+GGG + chr2_1:651891-651910 Msa0186010:intron 45.0%
!! TGGTTCTGGTGATAAAAGGG+AGG - chr2_1:651973-651992 None:intergenic 45.0%
GGAGCTAGTGATCACATTTG+TGG - chr2_1:652251-652270 None:intergenic 45.0%
TTGGTCATTCACCAACTGAC+AGG - chr2_1:652343-652362 None:intergenic 45.0%
TGGTGAATGACCAAGAGACA+TGG + chr2_1:652349-652368 Msa0186010:intron 45.0%
GATGAGAAGCCTTCATCATG+TGG - chr2_1:652500-652519 None:intergenic 45.0%
CAAACTGTGTGTGCAGAGTA+CGG - chr2_1:652952-652971 None:intergenic 45.0%
GCAACAACTTAGTGCATTCC+TGG - chr2_1:653201-653220 None:intergenic 45.0%
TTGATCCTCTGTTTCGACCT+TGG - chr2_1:653231-653250 None:intergenic 45.0%
!! TCAATGCGAAGAGCTTTAGG+AGG - chr2_1:653307-653326 None:intergenic 45.0%
CGATCAATGCGAAGAGCTTT+AGG - chr2_1:653310-653329 None:intergenic 45.0%
GGAGAAACAGTGACAGATGA+AGG + chr2_1:653364-653383 Msa0186010:intron 45.0%
ACAGATGAAGGTCCATCACT+AGG + chr2_1:653376-653395 Msa0186010:intron 45.0%
GTGAGAACATCGTTGTTACG+AGG + chr2_1:653427-653446 Msa0186010:intron 45.0%
GCTTTCTCAAGCTCCATCAA+TGG - chr2_1:653455-653474 None:intergenic 45.0%
ATGGAGCTTGAGAAAGCTTG+CGG + chr2_1:653458-653477 Msa0186010:intron 45.0%
CTTGCGGAAGACGAATCAAA+AGG + chr2_1:653474-653493 Msa0186010:intron 45.0%
! TAAGGTGTAGTGTTAGCCTG+TGG + chr2_1:649011-649030 Msa0186010:intron 45.0%
TCCTCAATTACTTGTGCCAC+AGG - chr2_1:649030-649049 None:intergenic 45.0%
!! TCCAGGGCACCATATTTTCA+GGG - chr2_1:654290-654309 None:intergenic 45.0%
TCGGTACACTTTGTACGAGA+TGG + chr2_1:654863-654882 Msa0186010:intron 45.0%
AGTGGAATACGAGAGACACT+CGG - chr2_1:655262-655281 None:intergenic 45.0%
CTAATATATAGGCAACGGGG+TGG + chr2_1:655292-655311 Msa0186010:intron 45.0%
CATTTGTCCCCAAACTTTGC+CGG + chr2_1:655371-655390 Msa0186010:intron 45.0%
ATTTGTCCCCAAACTTTGCC+GGG + chr2_1:655372-655391 Msa0186010:intron 45.0%
TTCAAACCCGGCAAAGTTTG+GGG - chr2_1:655381-655400 None:intergenic 45.0%
GTACATATCACCCACCAAAG+AGG + chr2_1:655581-655600 Msa0186010:intron 45.0%
AGTCCTACCCACAACTTTGT+GGG + chr2_1:655623-655642 Msa0186010:intron 45.0%
TGACTCACCCACAAAGTTGT+GGG - chr2_1:655633-655652 None:intergenic 45.0%
TTGACTCACCCACAAAGTTG+TGG - chr2_1:655634-655653 None:intergenic 45.0%
TTACATGAACGGGTAAGGTG+AGG - chr2_1:655745-655764 None:intergenic 45.0%
AGGGAAACTCCACTATGATG+TGG - chr2_1:655803-655822 None:intergenic 45.0%
AGTGGAGTTTCCCTTAAACG+GGG + chr2_1:655809-655828 Msa0186010:intron 45.0%
GGACCAATTTCAGTGGCTTA+TGG - chr2_1:656194-656213 None:intergenic 45.0%
AGCCACTGAAATTGGTCCAA+TGG + chr2_1:656196-656215 Msa0186010:intron 45.0%
CACCATTGGACCAATTTCAG+TGG - chr2_1:656201-656220 None:intergenic 45.0%
CTGAAATTGGTCCAATGGTG+AGG + chr2_1:656201-656220 Msa0186010:intron 45.0%
GTACTCAAACTCCTCACCAT+TGG - chr2_1:656215-656234 None:intergenic 45.0%
!! CGAGAGTATCCGTGAAGTAT+TGG - chr2_1:656491-656510 None:intergenic 45.0%
!! GAAGTATCGGTATCCGATAC+GGG - chr2_1:656522-656541 None:intergenic 45.0%
!! CGAGAGTATCCGTGAAGTAT+CGG - chr2_1:656491-656510 None:intergenic 45.0%
CGATACTTCACGGATACTCT+CGG + chr2_1:656533-656552 Msa0186010:intron 45.0%
ACCCGCACTCATATAGTATC+CGG + chr2_1:656919-656938 Msa0186010:intron 45.0%
! AATGCAGCCTTGTCATGGAA+AGG - chr2_1:657045-657064 None:intergenic 45.0%
GATTGGGACCATCTCTTTCA+TGG - chr2_1:657258-657277 None:intergenic 45.0%
GGAAAGGTTGAAGCAGTAGA+AGG + chr2_1:657699-657718 Msa0186010:CDS 45.0%
AAGGTTGAAGCAGTAGAAGG+TGG + chr2_1:657702-657721 Msa0186010:CDS 45.0%
GGTGGTCATGATGAACTTTG+TGG + chr2_1:657720-657739 Msa0186010:CDS 45.0%
AATGCTCCTTCGTAAGTACG+GGG + chr2_1:657776-657795 Msa0186010:CDS 45.0%
ATTGGTGGAACGTCCACTAT+AGG + chr2_1:657883-657902 Msa0186010:CDS 45.0%
TCAACTGAACTCCGGATTAC+CGG + chr2_1:658106-658125 Msa0186010:intron 45.0%
TTACCGGAGTCTCCTTCATT+TGG + chr2_1:658122-658141 Msa0186010:intron 45.0%
ACAGACCTACTCAGTGACAT+AGG - chr2_1:658790-658809 None:intergenic 45.0%
! AAGTTTCTTGCTAGAGGTGC+AGG + chr2_1:658958-658977 Msa0186010:three_prime_UTR 45.0%
!! TATATTATTGTTTAAATTAT+TGG + chr2_1:647211-647230 Msa0186010:intron 5.0%
!!! ATTTAAAAAATTTGTTAATT+TGG + chr2_1:652055-652074 Msa0186010:intron 5.0%
!!! TTTTATTAAATATTTTATAG+TGG - chr2_1:654033-654052 None:intergenic 5.0%
AGGCACACACTCTCACAACA+AGG - chr2_1:646855-646874 None:intergenic 50.0%
GGGGAAAAGGAAAGAGAGGA+AGG - chr2_1:646875-646894 None:intergenic 50.0%
! TCCTCTCTTTCCTTTTCCCC+AGG + chr2_1:646875-646894 Msa0186010:five_prime_UTR 50.0%
ACCTGGGGAAAAGGAAAGAG+AGG - chr2_1:646879-646898 None:intergenic 50.0%
GAAAGAGTGGAAAGCTGGGT+TGG - chr2_1:646955-646974 None:intergenic 50.0%
TACAGCATCAAGACCCGTGT+AGG - chr2_1:647111-647130 None:intergenic 50.0%
TCTGCTGCTGGATTGCATCT+AGG + chr2_1:647483-647502 Msa0186010:five_prime_UTR 50.0%
AAAGAGGGTGAGTTGCGATC+TGG - chr2_1:647598-647617 None:intergenic 50.0%
TCCTGACCTTGACCACTTCA+TGG + chr2_1:647957-647976 Msa0186010:CDS 50.0%
ACCATGAAGTGGTCAAGGTC+AGG - chr2_1:647961-647980 None:intergenic 50.0%
GAAAAGGGCCACTCATGTTC+AGG - chr2_1:648417-648436 None:intergenic 50.0%
ACCATCTCATGATTCGCCCA+AGG - chr2_1:648644-648663 None:intergenic 50.0%
AGCTGGCACTAGTTCAGAGT+TGG - chr2_1:648967-648986 None:intergenic 50.0%
GCACTGCAAGTTACATGAGC+TGG - chr2_1:648984-649003 None:intergenic 50.0%
GCCTGTGGCACAAGTAATTG+AGG + chr2_1:649026-649045 Msa0186010:intron 50.0%
ATCATGGTCAAGCTTGTGGG+AGG - chr2_1:649121-649140 None:intergenic 50.0%
CTGCTACATGTGAGCTTCAG+TGG - chr2_1:649424-649443 None:intergenic 50.0%
CTGAAGCTCACATGTAGCAG+TGG + chr2_1:649424-649443 Msa0186010:intron 50.0%
AGCTCTGTACTCAGCTTCAG+AGG + chr2_1:649451-649470 Msa0186010:intron 50.0%
CTCAGCTTCAGAGGAAGATC+TGG + chr2_1:649460-649479 Msa0186010:intron 50.0%
ATGTTGATGCAGACTGGGCA+GGG - chr2_1:649577-649596 None:intergenic 50.0%
TATGTTGATGCAGACTGGGC+AGG - chr2_1:649578-649597 None:intergenic 50.0%
GGGCTATGTTGATGCAGACT+GGG - chr2_1:649582-649601 None:intergenic 50.0%
TGGGCTATGTTGATGCAGAC+TGG - chr2_1:649583-649602 None:intergenic 50.0%
GGGAAGAAAAGACCAAGACC+AGG + chr2_1:649626-649645 Msa0186010:intron 50.0%
TCTTGCTACAGGAGGCTCAT+TGG - chr2_1:649785-649804 None:intergenic 50.0%
TGCAGTTTGCAGACTTTGCC+AGG + chr2_1:650232-650251 Msa0186010:intron 50.0%
GCAGTTTGCAGACTTTGCCA+GGG + chr2_1:650233-650252 Msa0186010:intron 50.0%
!! GAAGGGGTTTCTAGTTTCCC+TGG - chr2_1:650253-650272 None:intergenic 50.0%
GGGAAACTAGAAACCCCTTC+TGG + chr2_1:650253-650272 Msa0186010:intron 50.0%
CCACCCAATGTGAAGCCAAT+TGG - chr2_1:650532-650551 None:intergenic 50.0%
! CCAATTGGCTTCACATTGGG+TGG + chr2_1:650529-650548 Msa0186010:intron 50.0%
ACAAGAGTCAAATCTGCCCC+GGG - chr2_1:650814-650833 None:intergenic 50.0%
ATAACAGGTGGTGAGGGAAG+AGG + chr2_1:650844-650863 Msa0186010:intron 50.0%
GGGATGGAAGTGGAAGATGA+TGG + chr2_1:650874-650893 Msa0186010:intron 50.0%
GGGTCTGACACAGTTTCAGA+AGG + chr2_1:650928-650947 Msa0186010:intron 50.0%
ACCCCAACAAAATGCAAGGG+TGG - chr2_1:651415-651434 None:intergenic 50.0%
CTAGTACCTTGCCTGTCAGT+TGG + chr2_1:652329-652348 Msa0186010:intron 50.0%
CATTCACCAACTGACAGGCA+AGG - chr2_1:652338-652357 None:intergenic 50.0%
CGTACTCTGCACACACAGTT+TGG + chr2_1:652950-652969 Msa0186010:intron 50.0%
CTGCACACACAGTTTGGTAC+AGG + chr2_1:652956-652975 Msa0186010:intron 50.0%
CGATTCCAAGGTCGAAACAG+AGG + chr2_1:653223-653242 Msa0186010:intron 50.0%
! TTGTTACGAGGCGCCATTGA+TGG + chr2_1:653439-653458 Msa0186010:intron 50.0%
AGCTGGCACTAGTTCAGAGT+TGG - chr2_1:648967-648986 None:intergenic 50.0%
GCACTGCAAGTTACATGAGC+TGG - chr2_1:648984-649003 None:intergenic 50.0%
GCCTGTGGCACAAGTAATTG+AGG + chr2_1:649026-649045 Msa0186010:intron 50.0%
!! CAAGTGCCGAGTGTAGACTT+TGG - chr2_1:653932-653951 None:intergenic 50.0%
!! CCAGGGCACCATATTTTCAG+GGG - chr2_1:654289-654308 None:intergenic 50.0%
!! GTCCAGGGCACCATATTTTC+AGG - chr2_1:654291-654310 None:intergenic 50.0%
TTAGCTGTGGTCCTGAGCAT+GGG - chr2_1:654328-654347 None:intergenic 50.0%
TTTAGCTGTGGTCCTGAGCA+TGG - chr2_1:654329-654348 None:intergenic 50.0%
TTCTTGATAGGAGCGGTACG+AGG - chr2_1:655443-655462 None:intergenic 50.0%
AATGCGAGGACCTCTTTGGT+GGG - chr2_1:655594-655613 None:intergenic 50.0%
TACCAATGCGAGGACCTCTT+TGG - chr2_1:655598-655617 None:intergenic 50.0%
GAGTCCTACCCACAACTTTG+TGG + chr2_1:655622-655641 Msa0186010:intron 50.0%
TCACCCACAAAGTTGTGGGT+AGG - chr2_1:655629-655648 None:intergenic 50.0%
ACCAAATCCGCCCCGTTTAA+GGG - chr2_1:655822-655841 None:intergenic 50.0%
! TTAAACGGGGCGGATTTGGT+CGG + chr2_1:655822-655841 Msa0186010:intron 50.0%
AATGGAGACGGTTTGAACCC+AGG - chr2_1:656250-656269 None:intergenic 50.0%
! TTGGAGTATCCGGGCTTCAT+AGG - chr2_1:656443-656462 None:intergenic 50.0%
GAAGCCCGGATACTCCAAAA+CGG + chr2_1:656445-656464 Msa0186010:intron 50.0%
!!! GTGTCCGTTTTGGAGTATCC+GGG - chr2_1:656452-656471 None:intergenic 50.0%
!!! CGTGTCCGTTTTGGAGTATC+CGG - chr2_1:656453-656472 None:intergenic 50.0%
! ATACGGGTACGTGTCCGTTT+TGG - chr2_1:656462-656481 None:intergenic 50.0%
TCTCGGATACGTACCCGTAT+CGG + chr2_1:656506-656525 Msa0186010:intron 50.0%
CCCGGATACTATATGAGTGC+GGG - chr2_1:656923-656942 None:intergenic 50.0%
CCCGCACTCATATAGTATCC+GGG + chr2_1:656920-656939 Msa0186010:intron 50.0%
GCCCGGATACTATATGAGTG+CGG - chr2_1:656924-656943 None:intergenic 50.0%
CTTTGTGGCACATCATGTCC+AGG + chr2_1:657735-657754 Msa0186010:CDS 50.0%
ATGCTCCTTCGTAAGTACGG+GGG + chr2_1:657777-657796 Msa0186010:CDS 50.0%
TGGGATAAGGCCACCTATAG+TGG - chr2_1:657899-657918 None:intergenic 50.0%
!! CTATAGGTGGCCTTATCCCA+CGG + chr2_1:657899-657918 Msa0186010:CDS 50.0%
TGAAGGAGACTCCGGTAATC+CGG - chr2_1:658120-658139 None:intergenic 50.0%
CTGCAGCTGTCAGATATGAC+TGG + chr2_1:658469-658488 Msa0186010:CDS 50.0%
GTAAGTAGCACCAGCATAGC+AGG + chr2_1:658586-658605 Msa0186010:CDS 50.0%
TTACAGAGGTCCTGCTATGC+TGG - chr2_1:658599-658618 None:intergenic 50.0%
AGGGCATAGGCGTATTGTTC+TGG - chr2_1:658745-658764 None:intergenic 50.0%
CTACTCAGTGACATAGGTGC+CGG - chr2_1:658784-658803 None:intergenic 50.0%
GCTGCTGGATTGCATCTAGG+AGG + chr2_1:647486-647505 Msa0186010:five_prime_UTR 55.0%
GCCTTGGGCGAATCATGAGA+TGG + chr2_1:648640-648659 Msa0186010:intron 55.0%
GTGAGGGAAGAGGAGGGTTA+GGG + chr2_1:650854-650873 Msa0186010:intron 55.0%
AGGAGGGTTAGGGATGGAAG+TGG + chr2_1:650864-650883 Msa0186010:intron 55.0%
! TCTTCGCATTGATCGAGCCC+AGG + chr2_1:653315-653334 Msa0186010:intron 55.0%
CCCCTGAAAATATGGTGCCC+TGG + chr2_1:654286-654305 Msa0186010:intron 55.0%
! TATAGGCAACGGGGTGGGTT+AGG + chr2_1:655298-655317 Msa0186010:intron 55.0%
!! ATAGGCAACGGGGTGGGTTA+GGG + chr2_1:655299-655318 Msa0186010:intron 55.0%
AGGAAACTCAGCCCCGATTG+GGG - chr2_1:655423-655442 None:intergenic 55.0%
GAGGAAACTCAGCCCCGATT+GGG - chr2_1:655424-655443 None:intergenic 55.0%
CAATGCGAGGACCTCTTTGG+TGG - chr2_1:655595-655614 None:intergenic 55.0%
CACCAAAGAGGTCCTCGCAT+TGG + chr2_1:655593-655612 Msa0186010:intron 55.0%
GGACTCATGCTACCAATGCG+AGG - chr2_1:655608-655627 None:intergenic 55.0%
GGAGTTTCCCTTAAACGGGG+CGG + chr2_1:655812-655831 Msa0186010:intron 55.0%
! TCCCTTAAACGGGGCGGATT+TGG + chr2_1:655818-655837 Msa0186010:intron 55.0%
GACCAAATCCGCCCCGTTTA+AGG - chr2_1:655823-655842 None:intergenic 55.0%
! TAAACGGGGCGGATTTGGTC+GGG + chr2_1:655823-655842 Msa0186010:intron 55.0%
! GGATTTGGTCGGGTTTGGGT+AGG + chr2_1:655833-655852 Msa0186010:intron 55.0%
TTTGGTCGGGTTTGGGTAGG+TGG + chr2_1:655836-655855 Msa0186010:intron 55.0%
TTGGTCGGGTTTGGGTAGGT+GGG + chr2_1:655837-655856 Msa0186010:intron 55.0%
GTGCGGGTATGATACGACAC+AGG - chr2_1:656907-656926 None:intergenic 55.0%
GGTTAGATCACGAGGCAGCA+GGG + chr2_1:657652-657671 Msa0186010:intron 55.0%
GGTAACCCCCGTACTTACGA+AGG - chr2_1:657785-657804 None:intergenic 55.0%
GGTGGAACGTCCACTATAGG+TGG + chr2_1:657886-657905 Msa0186010:CDS 55.0%
CGGCACCTATGTCACTGAGT+AGG + chr2_1:658782-658801 Msa0186010:three_prime_UTR 55.0%
AGGACAGATGGTCGTGACGC+GGG - chr2_1:648568-648587 None:intergenic 60.0%
GAGGACAGATGGTCGTGACG+CGG - chr2_1:648569-648588 None:intergenic 60.0%
ACAGGTGGTGAGGGAAGAGG+AGG + chr2_1:650847-650866 Msa0186010:intron 60.0%
CAGGTGGTGAGGGAAGAGGA+GGG + chr2_1:650848-650867 Msa0186010:intron 60.0%
GGTGAGGGAAGAGGAGGGTT+AGG + chr2_1:650853-650872 Msa0186010:intron 60.0%
GGGAAGAGGAGGGTTAGGGA+TGG + chr2_1:650858-650877 Msa0186010:intron 60.0%
!! TAGGCAACGGGGTGGGTTAG+GGG + chr2_1:655300-655319 Msa0186010:intron 60.0%
CACGCATTTCCGCCCCCAAT+CGG + chr2_1:655407-655426 Msa0186010:intron 60.0%
ACGCATTTCCGCCCCCAATC+GGG + chr2_1:655408-655427 Msa0186010:intron 60.0%
GGAAACTCAGCCCCGATTGG+GGG - chr2_1:655422-655441 None:intergenic 60.0%
CGAGGAAACTCAGCCCCGAT+TGG - chr2_1:655425-655444 None:intergenic 60.0%
! GGGCGGATTTGGTCGGGTTT+GGG + chr2_1:655829-655848 Msa0186010:intron 60.0%
GGGTTAGATCACGAGGCAGC+AGG + chr2_1:657651-657670 Msa0186010:intron 60.0%
!! GCTGGGTTGGCTACAGCACC+TGG - chr2_1:646942-646961 None:intergenic 65.0%
TGCAGACTGGGCAGGGTGTG+TGG - chr2_1:649570-649589 None:intergenic 65.0%
TGGTCCTGAGCATGGGCCGA+GGG - chr2_1:654321-654340 None:intergenic 65.0%
CGCATTTCCGCCCCCAATCG+GGG + chr2_1:655409-655428 Msa0186010:intron 65.0%
AACTCAGCCCCGATTGGGGG+CGG - chr2_1:655419-655438 None:intergenic 65.0%
! GGGGCGGATTTGGTCGGGTT+TGG + chr2_1:655828-655847 Msa0186010:intron 65.0%
CGAGGCAGCAGGGACATCAG+AGG + chr2_1:657662-657681 Msa0186010:CDS 65.0%
GGTCGTGACGCGGGCCTCAA+TGG - chr2_1:648559-648578 None:intergenic 70.0%
GTCCTGAGCATGGGCCGAGG+GGG - chr2_1:654319-654338 None:intergenic 70.0%
GGTCCTGAGCATGGGCCGAG+GGG - chr2_1:654320-654339 None:intergenic 70.0%
GTGGTCCTGAGCATGGGCCG+AGG - chr2_1:654322-654341 None:intergenic 70.0%
GCCCTGGACTGCCTCCCCCT+CGG + chr2_1:654302-654321 Msa0186010:intron 75.0%
GCCGAGGGGGAGGCAGTCCA+GGG - chr2_1:654306-654325 None:intergenic 75.0%
CTGAGCATGGGCCGAGGGGG+AGG - chr2_1:654316-654335 None:intergenic 75.0%
CTCCCCCTCGGCCCATGCTC+AGG + chr2_1:654314-654333 Msa0186010:intron 75.0%
! GGCCGAGGGGGAGGCAGTCC+AGG - chr2_1:654307-654326 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 646789 659011 646789 ID=Msa0186010;Name=Msa0186010
chr2_1 mRNA 646789 659011 646789 ID=Msa0186010-mRNA-1;Parent=Msa0186010;Name=Msa0186010-mRNA-1;_AED=0.04;_eAED=0.04;_QI=293|1|1|1|0.8|0.66|6|393|267
chr2_1 exon 646789 646990 646789 ID=Msa0186010-mRNA-1:exon:98;Parent=Msa0186010-mRNA-1
chr2_1 exon 647445 647655 647445 ID=Msa0186010-mRNA-1:exon:99;Parent=Msa0186010-mRNA-1
chr2_1 exon 647868 647978 647868 ID=Msa0186010-mRNA-1:exon:100;Parent=Msa0186010-mRNA-1
chr2_1 exon 648142 648289 648142 ID=Msa0186010-mRNA-1:exon:101;Parent=Msa0186010-mRNA-1
chr2_1 exon 657658 657920 657658 ID=Msa0186010-mRNA-1:exon:102;Parent=Msa0186010-mRNA-1
chr2_1 exon 658457 659011 658457 ID=Msa0186010-mRNA-1:exon:103;Parent=Msa0186010-mRNA-1
chr2_1 five_prime_UTR 646789 646990 646789 ID=Msa0186010-mRNA-1:five_prime_utr;Parent=Msa0186010-mRNA-1
chr2_1 five_prime_UTR 647445 647535 647445 ID=Msa0186010-mRNA-1:five_prime_utr;Parent=Msa0186010-mRNA-1
chr2_1 CDS 647536 647655 647536 ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1
chr2_1 CDS 647868 647978 647868 ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1
chr2_1 CDS 648142 648289 648142 ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1
chr2_1 CDS 657658 657920 657658 ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1
chr2_1 CDS 658457 658618 658457 ID=Msa0186010-mRNA-1:cds;Parent=Msa0186010-mRNA-1
chr2_1 three_prime_UTR 658619 659011 658619 ID=Msa0186010-mRNA-1:three_prime_utr;Parent=Msa0186010-mRNA-1
Gene Sequence

>Msa0186010

ATGGAACACAACCAATCGGATCTAATAAGGTTGGATATGACGGATCGAATTATCAAGAACCAGATCGCAACTCACCCTCTTTATCCAAATCTACTATCTGCTTTTTTAGAATGCCAAAAGGTTGGGGCACCAACAGAACTTGCTTCTCTTCTTGAAGAAATAGGGCGTGAAAACCACCAAAATAATGCTTTCCGTGAGATAGGAGATGATCCTGACCTTGACCACTTCATGGAATCATACTGTGAAGTTCTTCATAGATACAAAGAGGAGTTATCCAAGCCCTTCAATGAAGCAACATTATTTTTGTGCAATATTGAATCACAACTAAACGAACTTTGCAAGGGGACACAAACAATGTCATCCGATTACAACCGTTCAGATCACGAGGCAGCAGGGACATCAGAGGATGAAATGAGTTGTGGAAAGGTTGAAGCAGTAGAAGGTGGTCATGATGAACTTTGTGGCACATCATGTCCAGGTGATAAAGAGCTTAAAGAAATGCTCCTTCGTAAGTACGGGGGTTACCTTAGCAACTTAAGACAGGAATTTCTCAAGAAAAGGAAAAAGGGTAAACTACCAAAGGATGCAAGAAAAGCATTGATGGATTGGTGGAACGTCCACTATAGGTGGCCTTATCCCACGGAGGAGGAGAAACTGCAGCTGTCAGATATGACTGGACTTGATATAAAGCAGATAAATAATTGGTTCATCAATCAGAGGAAAAGACACTGGAAACCATCTGAAGATATGAGATTTTCTATTATGGAGGGTGTAAGTAGCACCAGCATAGCAGGACCTCTGTAA

Protein sequence

>Msa0186010

MEHNQSDLIRLDMTDRIIKNQIATHPLYPNLLSAFLECQKVGAPTELASLLEEIGRENHQNNAFREIGDDPDLDHFMESYCEVLHRYKEELSKPFNEATLFLCNIESQLNELCKGTQTMSSDYNRSDHEAAGTSEDEMSCGKVEAVEGGHDELCGTSCPGDKELKEMLLRKYGGYLSNLRQEFLKKRKKGKLPKDARKALMDWWNVHYRWPYPTEEEKLQLSDMTGLDIKQINNWFINQRKRHWKPSEDMRFSIMEGVSSTSIAGPL*