AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0207670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207670 MtrunA17_Chr2g0306791 99.713 348 1 0 1 348 1 348 0.0 718
Msa0207670 MtrunA17_Chr7g0250671 92.442 172 12 1 167 337 1 172 4.18e-105 306
Msa0207670 MtrunA17_Chr2g0322171 30.841 321 190 8 9 301 3 319 2.82e-38 139
Msa0207670 MtrunA17_Chr1g0185501 25.685 292 203 9 15 297 26 312 2.47e-18 84.3
Msa0207670 MtrunA17_Chr8g0383711 26.087 276 193 8 30 299 29 299 1.23e-16 79.3
Msa0207670 MtrunA17_Chr4g0067151 23.567 314 213 10 4 297 15 321 5.85e-15 74.7
Msa0207670 MtrunA17_Chr7g0253861 26.000 300 160 9 10 296 92 342 6.49e-14 72.0
Msa0207670 MtrunA17_Chr6g0448921 28.042 189 130 6 112 297 27 212 1.48e-13 72.0
Msa0207670 MtrunA17_Chr3g0095501 23.711 291 201 9 21 297 272 555 2.32e-13 71.2
Msa0207670 MtrunA17_Chr3g0144511 25.843 267 174 8 56 299 60 325 9.95e-13 68.6
Msa0207670 MtrunA17_Chr5g0405851 28.571 203 138 5 14 213 251 449 1.72e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207670 AT3G15610.1 79.710 345 62 1 1 345 1 337 0.0 567
Msa0207670 AT1G52730.1 80.000 345 63 1 1 345 1 339 0.0 564
Msa0207670 AT1G52730.2 80.000 345 63 1 1 345 1 339 0.0 564
Msa0207670 AT1G15470.1 76.807 332 71 1 9 340 4 329 0.0 543
Msa0207670 AT1G52730.3 86.364 264 36 0 1 264 1 264 2.04e-168 470
Msa0207670 AT1G15470.2 83.137 255 43 0 9 263 4 258 1.16e-162 456
Msa0207670 AT2G46290.1 29.448 326 180 8 9 296 30 343 2.35e-39 143
Msa0207670 AT2G46280.2 30.189 318 188 8 9 296 3 316 2.76e-34 129
Msa0207670 AT2G46280.1 30.189 318 188 8 9 296 3 316 2.76e-34 129
Msa0207670 AT2G46280.3 30.488 246 150 7 9 237 3 244 7.01e-22 93.6
Msa0207670 AT3G49660.1 26.441 295 200 8 15 297 23 312 5.08e-21 92.4
Msa0207670 AT4G02730.1 30.078 256 161 12 54 297 36 285 6.15e-17 81.3
Msa0207670 AT4G02730.1 26.165 279 194 10 30 298 54 330 2.08e-15 76.6
Msa0207670 AT5G08560.1 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
Msa0207670 AT5G08560.2 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
Msa0207670 AT5G08560.3 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
Msa0207670 AT5G64730.1 22.993 274 202 7 30 298 29 298 1.38e-13 70.9
Msa0207670 AT2G43770.1 24.503 302 205 12 10 296 47 340 2.67e-13 70.5
Msa0207670 AT2G01330.1 23.167 341 197 12 15 297 187 520 1.74e-12 68.9
Msa0207670 AT1G71840.1 26.718 262 174 11 49 297 58 314 4.39e-12 67.4
Msa0207670 AT3G18130.1 24.068 295 185 9 14 300 61 324 7.09e-12 66.2
Msa0207670 AT1G48630.1 24.407 295 184 9 14 300 61 324 2.75e-11 64.3
Msa0207670 AT5G23430.1 26.984 189 132 6 112 297 27 212 8.21e-11 63.9
Msa0207670 AT5G23430.3 26.984 189 132 6 112 297 27 212 8.66e-11 63.9
Msa0207670 AT5G23430.2 26.984 189 132 6 112 297 27 212 8.66e-11 63.9

Find 152 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAAAGCTCTGGAAATTT+TGG 0.049365 2_1:-40303723 None:intergenic
AGTGCTGTTGTTGTTCCTTT+AGG 0.148846 2_1:+40303836 Msa0207670:five_prime_UTR
GTGCTGTTGTTGTTCCTTTA+GGG 0.200212 2_1:+40303837 Msa0207670:five_prime_UTR
CTCTTCCTTTCCTTTGGACT+TGG 0.240542 2_1:-40309698 None:intergenic
GTAAAACAATGGCAAGAAAA+AGG 0.249836 2_1:-40309754 None:intergenic
ATGGTTCTACTGTCAAGTTT+TGG 0.261085 2_1:+40308707 Msa0207670:CDS
CCCCGCCTCTTCCTTTCCTT+TGG 0.282864 2_1:-40309704 None:intergenic
GTTCAAATATCATGCTAAAA+TGG 0.284531 2_1:-40309776 None:intergenic
ATTGAGTTCATGTACTGATA+TGG 0.286538 2_1:+40308425 Msa0207670:CDS
GGGGATTTATCCACTTCTTT+AGG 0.292998 2_1:-40308357 None:intergenic
CTCCTCTTACGCTGTCGTTC+TGG 0.295788 2_1:-40303468 None:intergenic
TTTCCAGAGCTTTGAGGGTT+AGG 0.323955 2_1:+40303729 Msa0207670:five_prime_UTR
GGTTTGTGTGCAGCAAAGTT+TGG 0.345909 2_1:+40307594 Msa0207670:intron
AACAAACTTGTTACCAAACT+TGG 0.348142 2_1:-40308884 None:intergenic
ATTAGAACGATAAGATAAAA+TGG 0.353909 2_1:-40303621 None:intergenic
TCAGGGAGTTTGTGGGATAC+TGG 0.354569 2_1:+40309920 Msa0207670:three_prime_UTR
GAGAGGAAGGGCCAGGGCGC+AGG 0.355400 2_1:-40303558 None:intergenic
CACTGTGTCCGGTTCTCTCC+TGG 0.356259 2_1:+40309499 Msa0207670:CDS
AAAGTTTGGGATGCATTAAC+AGG 0.357474 2_1:+40307608 Msa0207670:CDS
TGCTGTTTGGAGTTGTTGTT+TGG 0.358064 2_1:+40304326 Msa0207670:CDS
GAGCTGGGAGAGGAAGGGCC+AGG 0.366606 2_1:-40303565 None:intergenic
AAGAAACCATCAGGAGTAAC+AGG 0.368685 2_1:-40303992 None:intergenic
CAAAATTTCCAGAGCTTTGA+GGG 0.370100 2_1:+40303724 Msa0207670:five_prime_UTR
TAGCATGATATTTGAACCTT+GGG 0.370757 2_1:+40309782 Msa0207670:three_prime_UTR
ACAAGAAATGAAATGATTGA+TGG 0.376047 2_1:-40303809 None:intergenic
TTTGGTAACAAGTTTGTTGC+TGG 0.381118 2_1:+40308889 Msa0207670:CDS
GCCGATTCAAATCATAAATT+CGG 0.388321 2_1:-40308323 None:intergenic
GTTTGTGTGCAGCAAAGTTT+GGG 0.396138 2_1:+40307595 Msa0207670:intron
GCTTCGTTAGAGCCCAAGTT+TGG 0.408433 2_1:+40308871 Msa0207670:CDS
AAGGGCATAAAGGTGCTGTT+TGG 0.408519 2_1:+40304313 Msa0207670:CDS
GGAACATTTGAAGGGCATAA+AGG 0.410447 2_1:+40304303 Msa0207670:CDS
AGGATGGAACCATCAGAATA+TGG 0.410704 2_1:+40309548 Msa0207670:CDS
TACAGTCCTGTTACTCCTGA+TGG 0.412838 2_1:+40303986 Msa0207670:CDS
ATGAATTGACGAGCTGGTTA+AGG 0.413167 2_1:+40309869 Msa0207670:three_prime_UTR
AAGGGCCAGGGCGCAGGGAT+TGG 0.419389 2_1:-40303552 None:intergenic
CCAAAATTTCCAGAGCTTTG+AGG 0.419724 2_1:+40303723 Msa0207670:five_prime_UTR
TCCGAATTTATGATTTGAAT+CGG 0.420073 2_1:+40308322 Msa0207670:CDS
ATACTAATCATGTATATTAG+AGG 0.421571 2_1:-40309806 None:intergenic
GATTGGATTGGAACATTTGA+AGG 0.427455 2_1:+40304294 Msa0207670:CDS
TTCCATACGGGCGATGAGAT+TGG 0.430232 2_1:+40308943 Msa0207670:CDS
GCGACTTGGTGTCAAGTGTC+TGG 0.437902 2_1:-40308633 None:intergenic
GAGGTTTCGCGCAGGATTGA+GGG 0.446305 2_1:+40309655 Msa0207670:CDS
GACTAGTGCTGAAGTGAGTC+AGG 0.452988 2_1:+40308660 Msa0207670:CDS
TATTCTGATGGTTCCATCCT+CGG 0.456186 2_1:-40309545 None:intergenic
GTCCAGAACGACAGCGTAAG+AGG 0.465943 2_1:+40303466 Msa0207670:five_prime_UTR
GTATAAGAGAGCAGGTCATA+AGG 0.467876 2_1:+40303525 Msa0207670:five_prime_UTR
TTAGCATGATATTTGAACCT+TGG 0.468326 2_1:+40309781 Msa0207670:three_prime_UTR
GCAACACTCCTGACTGAACC+AGG 0.469039 2_1:-40308378 None:intergenic
ACTTCTTTAGGAGGTGCATC+AGG 0.470919 2_1:-40308345 None:intergenic
GAAGGCAAATGCAGAGGAGG+AGG 0.475882 2_1:+40309636 Msa0207670:CDS
GGAATGGAGAGACTGGAGAT+TGG 0.482165 2_1:+40304277 Msa0207670:CDS
AGAGGAAGGGCCAGGGCGCA+GGG 0.482324 2_1:-40303557 None:intergenic
AACACAGAGCTGGGAGAGGA+AGG 0.483612 2_1:-40303571 None:intergenic
GGAGGAGAATCGTATGCATC+AGG 0.485943 2_1:+40309520 Msa0207670:CDS
GGAGGTTTCGCGCAGGATTG+AGG 0.486264 2_1:+40309654 Msa0207670:CDS
CTAATAAGAAAGAAACCATC+AGG 0.486855 2_1:-40304001 None:intergenic
TTGAGTTCATGTACTGATAT+GGG 0.489256 2_1:+40308426 Msa0207670:CDS
TTTAATTTCAGGGAGTTTGT+GGG 0.489273 2_1:+40309913 Msa0207670:three_prime_UTR
TTGGTAACAAGTTTGTTGCT+GGG 0.489658 2_1:+40308890 Msa0207670:CDS
GATGCATACGATTCTCCTCC+AGG 0.490054 2_1:-40309517 None:intergenic
AGCTGGGAGAGGAAGGGCCA+GGG 0.492838 2_1:-40303564 None:intergenic
ATTCTCCTCCAGGAGAGAAC+CGG 0.492972 2_1:-40309507 None:intergenic
ACCAAATGGAACCCTGGAAA+AGG 0.496038 2_1:+40309612 Msa0207670:CDS
CCTCCTAACCCTCAAAGCTC+TGG 0.501548 2_1:-40303732 None:intergenic
CTCACTTCAGCACTAGTCAT+AGG 0.502533 2_1:-40308655 None:intergenic
TCAGAGGGTTTATCACCAAA+TGG 0.504610 2_1:+40309598 Msa0207670:CDS
TACATGAACTCAATATAGTC+TGG 0.504684 2_1:-40308416 None:intergenic
CTCAGCGAGATATTCTCTGC+AGG 0.504716 2_1:-40310035 None:intergenic
CCCTGTCTGCCATATTCTGA+TGG 0.507125 2_1:-40309557 None:intergenic
ATGCTGAGGAATGGAGAGAC+TGG 0.507216 2_1:+40304270 Msa0207670:CDS
TATCTCGCTGAGGGTAGGTT+GGG 0.509080 2_1:+40310046 Msa0207670:three_prime_UTR
ACCATCAGAATATGGCAGAC+AGG 0.510525 2_1:+40309556 Msa0207670:CDS
ATGGTCCTGTACACTGTGTC+CGG 0.512630 2_1:+40309488 Msa0207670:CDS
AGGCTATGGGATGTAAGAAC+TGG 0.513301 2_1:+40308601 Msa0207670:intron
GGGTAGAAGTAACACAGAGC+TGG 0.514465 2_1:-40303581 None:intergenic
TCTGATTCATCATGAGTCAA+TGG 0.518807 2_1:-40309580 None:intergenic
GTTCAGTCAGGAGTGTTGCA+TGG 0.523714 2_1:+40308382 Msa0207670:CDS
GTTGATAATTCACAGGCTAT+GGG 0.524204 2_1:+40308588 Msa0207670:intron
CCAGAGCTTTGAGGGTTAGG+AGG 0.524290 2_1:+40303732 Msa0207670:five_prime_UTR
AATGAAATGATTGATGGAAA+CGG 0.526606 2_1:-40303803 None:intergenic
GATTTATCCACTTCTTTAGG+AGG 0.527221 2_1:-40308354 None:intergenic
GGAGAGACTGGAGATTGGAT+TGG 0.528885 2_1:+40304282 Msa0207670:CDS
CAAGTCCAAAGGAAAGGAAG+AGG 0.530035 2_1:+40309699 Msa0207670:CDS
GCAAACCAATCCCTGCGCCC+TGG 0.535809 2_1:+40303547 Msa0207670:five_prime_UTR
CGCTATATTACAACTGCTGA+TGG 0.538929 2_1:+40308688 Msa0207670:CDS
TTTACTCAGATTCATTATGT+CGG 0.539687 2_1:-40309994 None:intergenic
ATATCTCGCTGAGGGTAGGT+TGG 0.540588 2_1:+40310045 Msa0207670:three_prime_UTR
ATGATTGATGGAAACGGTAA+CGG 0.543040 2_1:-40303797 None:intergenic
TACCAATCTCATCGCCCGTA+TGG 0.543083 2_1:-40308945 None:intergenic
TCCAAAGGAAAGGAAGAGGC+GGG 0.544199 2_1:+40309703 Msa0207670:CDS
CTGTAAAAGAGATCAACAAC+TGG 0.548288 2_1:-40303968 None:intergenic
GACTAGTCGGACGGACGAGA+TGG 0.549462 2_1:-40303499 None:intergenic
AAAGAAGTGGATAAATCCCC+TGG 0.551218 2_1:+40308360 Msa0207670:CDS
TACTAATCATGTATATTAGA+GGG 0.553998 2_1:-40309805 None:intergenic
GCATGCAACAAAGGACATCA+TGG 0.555607 2_1:+40309469 Msa0207670:intron
CAAAGGAAAGGAAGAGGCGG+GGG 0.556170 2_1:+40309705 Msa0207670:CDS
CCATCAGAATATGGCAGACA+GGG 0.557804 2_1:+40309557 Msa0207670:CDS
ATAAATCCCCTGGTTCAGTC+AGG 0.558779 2_1:+40308370 Msa0207670:CDS
GAGAACCGGACACAGTGTAC+AGG 0.559046 2_1:-40309493 None:intergenic
GGAGGCCAAGTCCAAAGGAA+AGG 0.561592 2_1:+40309693 Msa0207670:CDS
ACAAACTTGTTACCAAACTT+GGG 0.561688 2_1:-40308883 None:intergenic
GGTAGAAGTAACACAGAGCT+GGG 0.562530 2_1:-40303580 None:intergenic
TAGTCACAGTATAAGAGAGC+AGG 0.563549 2_1:+40303517 Msa0207670:five_prime_UTR
GAGAATATCTCGCTGAGGGT+AGG 0.568177 2_1:+40310041 Msa0207670:three_prime_UTR
GTACTGATATGGGAGGCGTC+AGG 0.570966 2_1:+40308436 Msa0207670:CDS
AGCACTAGTCATAGGCGACT+TGG 0.571425 2_1:-40308647 None:intergenic
ACACAGAGCTGGGAGAGGAA+GGG 0.576011 2_1:-40303570 None:intergenic
ACTGTACCTCTTGTTTGTCA+CGG 0.577286 2_1:+40303935 Msa0207670:CDS
AAGTAACACAGAGCTGGGAG+AGG 0.579612 2_1:-40303575 None:intergenic
TGGTAACAAGTTTGTTGCTG+GGG 0.580435 2_1:+40308891 Msa0207670:CDS
TTGATAGTATGAAACCCTAA+AGG 0.582489 2_1:-40303851 None:intergenic
CATGTATATTAGAGGGCCCA+AGG 0.588640 2_1:-40309798 None:intergenic
TGATGCACCTCCTAAAGAAG+TGG 0.589350 2_1:+40308347 Msa0207670:CDS
CATATAATGAATTGACGAGC+TGG 0.589827 2_1:+40309863 Msa0207670:three_prime_UTR
GGAGAAGGCAAATGCAGAGG+AGG 0.590265 2_1:+40309633 Msa0207670:CDS
GTCCAAAGGAAAGGAAGAGG+CGG 0.595374 2_1:+40309702 Msa0207670:CDS
ATTGGATTGGAACATTTGAA+GGG 0.596088 2_1:+40304295 Msa0207670:CDS
GCTAGTCCTATGCTGAGGAA+TGG 0.597073 2_1:+40304261 Msa0207670:CDS
GGTAACAAGTTTGTTGCTGG+GGG 0.598590 2_1:+40308892 Msa0207670:CDS
GAAGCTGATTCCACATTGCA+AGG 0.600142 2_1:-40308853 None:intergenic
GCAGAGGAGGCCAAGTCCAA+AGG 0.602036 2_1:+40309688 Msa0207670:CDS
TGGAACCCTGGAAAAGGAGA+AGG 0.603332 2_1:+40309618 Msa0207670:CDS
GTGATGGCAGCATGCAACAA+AGG 0.603771 2_1:+40309460 Msa0207670:intron
TTTCTTATTAGCGCAAGCAA+AGG 0.606556 2_1:+40304013 Msa0207670:CDS
TATGCATCAGGATCCGAGGA+TGG 0.610567 2_1:+40309532 Msa0207670:CDS
TGCAGAGAATATCTCGCTGA+GGG 0.613151 2_1:+40310037 Msa0207670:three_prime_UTR
ATGCTAAAATGGTAAAACAA+TGG 0.614652 2_1:-40309765 None:intergenic
CAACACTCCTGACTGAACCA+GGG 0.615920 2_1:-40308377 None:intergenic
TTTATCACCAAATGGAACCC+TGG 0.617473 2_1:+40309606 Msa0207670:CDS
ATTGACTCATGATGAATCAG+AGG 0.620794 2_1:+40309582 Msa0207670:CDS
TCTCTTATACTGTGACTAGT+CGG 0.625942 2_1:-40303512 None:intergenic
GTCTCTCCATTCCTCAGCAT+AGG 0.627751 2_1:-40304267 None:intergenic
TTGACTCATGATGAATCAGA+GGG 0.630585 2_1:+40309583 Msa0207670:CDS
CCAAAGGAAAGGAAGAGGCG+GGG 0.631518 2_1:+40309704 Msa0207670:CDS
ATCGTATGCATCAGGATCCG+AGG 0.634906 2_1:+40309528 Msa0207670:CDS
TCAGCGAGATATTCTCTGCA+GGG 0.640286 2_1:-40310034 None:intergenic
AGTGCTGAAGTGAGTCAGGA+TGG 0.642357 2_1:+40308664 Msa0207670:CDS
CAGAGGAGGAGGTTTCGCGC+AGG 0.644543 2_1:+40309647 Msa0207670:CDS
GAGTGACCGTGACAAACAAG+AGG 0.644753 2_1:-40303941 None:intergenic
AACACTCCTGACTGAACCAG+GGG 0.647227 2_1:-40308376 None:intergenic
CTGCAGAGAATATCTCGCTG+AGG 0.663217 2_1:+40310036 Msa0207670:three_prime_UTR
TTATACTGTGACTAGTCGGA+CGG 0.668732 2_1:-40303508 None:intergenic
AAAGGAGAAGGCAAATGCAG+AGG 0.668862 2_1:+40309630 Msa0207670:CDS
CTATGACATGCCTTGCAATG+TGG 0.670893 2_1:+40308843 Msa0207670:CDS
AATCTGAGTAAACAGAAATG+CGG 0.674121 2_1:+40310005 Msa0207670:three_prime_UTR
TGTGTCCGGTTCTCTCCTGG+AGG 0.681279 2_1:+40309502 Msa0207670:CDS
GTTACGAAAAGTAACACAGG+TGG 0.691010 2_1:-40303770 None:intergenic
TAGATGCTAGTCCTATGCTG+AGG 0.696428 2_1:+40304256 Msa0207670:intron
TTACGAAAAGTAACACAGGT+GGG 0.698511 2_1:-40303769 None:intergenic
AGTTCATGTACTGATATGGG+AGG 0.705266 2_1:+40308429 Msa0207670:CDS
GGTGTTACGAAAAGTAACAC+AGG 0.721694 2_1:-40303773 None:intergenic
ATTGATGGAAACGGTAACGG+CGG 0.741225 2_1:-40303794 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAAAAAAAAAAAAAAAGA+GGG - chr2_1:40303650-40303669 None:intergenic 10.0%
!!! TATAAACTCAATTTTTAAAT+TGG + chr2_1:40304760-40304779 Msa0207670:intron 10.0%
!! ATATATATTCTGTTAAAATT+TGG + chr2_1:40308172-40308191 Msa0207670:intron 10.0%
!! ATAAGAACAAATATTATAAA+CGG - chr2_1:40309148-40309167 None:intergenic 10.0%
!! TGTATATATTAAAAAATAGT+TGG - chr2_1:40309309-40309328 None:intergenic 10.0%
!! GTATATATTGATAAATATTA+CGG + chr2_1:40309426-40309445 Msa0207670:intron 10.0%
!! TGGTTAAAAAAGAAAAAAAT+GGG - chr2_1:40303604-40303623 None:intergenic 15.0%
!! ATGGTTAAAAAAGAAAAAAA+TGG - chr2_1:40303605-40303624 None:intergenic 15.0%
!! CCTAAAAAAAAAAAAAAAAG+AGG - chr2_1:40303651-40303670 None:intergenic 15.0%
!!! CCTCTTTTTTTTTTTTTTTT+AGG + chr2_1:40303648-40303667 Msa0207670:five_prime_UTR 15.0%
!!! ATTTAATTTTGGAATTTTAG+TGG + chr2_1:40304200-40304219 Msa0207670:intron 15.0%
!! AAAGAATAAAATGTTAAATG+GGG - chr2_1:40305696-40305715 None:intergenic 15.0%
!! CAAAGAATAAAATGTTAAAT+GGG - chr2_1:40305697-40305716 None:intergenic 15.0%
!! ACAAAGAATAAAATGTTAAA+TGG - chr2_1:40305698-40305717 None:intergenic 15.0%
!! AAACATTTCTTATAATAACT+GGG + chr2_1:40306873-40306892 Msa0207670:intron 15.0%
!!! TGGTATTTATTTTCTATTTA+CGG - chr2_1:40307803-40307822 None:intergenic 15.0%
!!! TTTATGTTTGTTTTAATTTC+AGG + chr2_1:40309902-40309921 Msa0207670:three_prime_UTR 15.0%
!!! TTATGTTTGTTTTAATTTCA+GGG + chr2_1:40309903-40309922 Msa0207670:three_prime_UTR 15.0%
!! ATTAGAACGATAAGATAAAA+TGG - chr2_1:40303624-40303643 None:intergenic 20.0%
!!! TAATAGATCTGATCAATTTT+AGG + chr2_1:40304101-40304120 Msa0207670:intron 20.0%
!!! TAAGACAATAAACATTTTCA+CGG - chr2_1:40304578-40304597 None:intergenic 20.0%
!!! TATTTAAATTGGACCTTTTT+GGG - chr2_1:40304685-40304704 None:intergenic 20.0%
!!! CTTCTTTTACGTATTTAAAT+TGG - chr2_1:40304696-40304715 None:intergenic 20.0%
!!! ATTTTTAAATTGGTAAGAGT+TGG + chr2_1:40304770-40304789 Msa0207670:intron 20.0%
!! TAAAATCCTCATATAGTATT+AGG - chr2_1:40304796-40304815 None:intergenic 20.0%
!!! TATCTCAAAATGTTTCATTT+TGG - chr2_1:40305061-40305080 None:intergenic 20.0%
!!! TACTAGTATTATCTTTGTTT+TGG + chr2_1:40305416-40305435 Msa0207670:intron 20.0%
!!! TAATTTTGTAGAACTGAAAA+GGG - chr2_1:40305491-40305510 None:intergenic 20.0%
!!! TTAATTTTGTAGAACTGAAA+AGG - chr2_1:40305492-40305511 None:intergenic 20.0%
!! TTCAGTTCTACAAAATTAAT+TGG + chr2_1:40305493-40305512 Msa0207670:intron 20.0%
!!! CTAAAAAACAGTAGATTTTA+AGG - chr2_1:40305607-40305626 None:intergenic 20.0%
!!! TTACTAATTTTGTTTCCTTT+TGG + chr2_1:40305738-40305757 Msa0207670:intron 20.0%
!! ACAAAGTGATTTAGATTAAA+TGG - chr2_1:40305815-40305834 None:intergenic 20.0%
!! GAAACATTTCTTATAATAAC+TGG + chr2_1:40306872-40306891 Msa0207670:intron 20.0%
!!! AGTCAATTCAATTTTTTCAA+TGG + chr2_1:40307265-40307284 Msa0207670:intron 20.0%
!!! ATATTTGTTGGTATTCATTT+TGG + chr2_1:40307731-40307750 Msa0207670:intron 20.0%
!!! AATTTTGTGTTTTTGTCATT+AGG - chr2_1:40307773-40307792 None:intergenic 20.0%
!!! GGTATTTATTTTCTATTTAC+GGG - chr2_1:40307802-40307821 None:intergenic 20.0%
!! ATTGATGTTTGTATATATCT+GGG + chr2_1:40308254-40308273 Msa0207670:intron 20.0%
!! AATTCCATATAGGTAATAAT+AGG + chr2_1:40309237-40309256 Msa0207670:intron 20.0%
!!! ACTAAACTGATTTTTAAGTT+TGG + chr2_1:40309387-40309406 Msa0207670:intron 20.0%
!! TACTAATCATGTATATTAGA+GGG - chr2_1:40309808-40309827 None:intergenic 20.0%
!! ATACTAATCATGTATATTAG+AGG - chr2_1:40309809-40309828 None:intergenic 20.0%
!!! TTGTAAGTTTTAGTTTGTAT+TGG + chr2_1:40309839-40309858 Msa0207670:three_prime_UTR 20.0%
! AACAAAAACAAGAAGCAAAT+TGG - chr2_1:40303695-40303714 None:intergenic 25.0%
! AATGAAATGATTGATGGAAA+CGG - chr2_1:40303806-40303825 None:intergenic 25.0%
! ACAAGAAATGAAATGATTGA+TGG - chr2_1:40303812-40303831 None:intergenic 25.0%
!! TTGTGAGATTTTACAAGAAA+TGG + chr2_1:40303898-40303917 Msa0207670:exon 25.0%
!!! AAAGGTATTATTCTTGGATT+TGG + chr2_1:40304031-40304050 Msa0207670:intron 25.0%
!! AAGGTATTATTCTTGGATTT+GGG + chr2_1:40304032-40304051 Msa0207670:intron 25.0%
! AATTAAATGTTATCACGTGT+CGG - chr2_1:40304188-40304207 None:intergenic 25.0%
!!! CACGTGATAACATTTAATTT+TGG + chr2_1:40304189-40304208 Msa0207670:intron 25.0%
! TTTGTTAATTCAATGTGCAT+AGG + chr2_1:40304510-40304529 Msa0207670:intron 25.0%
!! AAGACAATAAACATTTTCAC+GGG - chr2_1:40304577-40304596 None:intergenic 25.0%
! TTTATTGTCTTATGCTTTAC+CGG + chr2_1:40304586-40304605 Msa0207670:intron 25.0%
! CACACACATCTAATATAAAT+AGG + chr2_1:40304651-40304670 Msa0207670:intron 25.0%
!! GTATTTAAATTGGACCTTTT+TGG - chr2_1:40304686-40304705 None:intergenic 25.0%
!!! ACTCGTAAATTTTTTGTCAT+TGG - chr2_1:40304726-40304745 None:intergenic 25.0%
! AAACCTATAATGTAATGTGA+TGG - chr2_1:40305009-40305028 None:intergenic 25.0%
! AATTGGAACTTTGATACTTA+TGG - chr2_1:40305149-40305168 None:intergenic 25.0%
!!! GAAGATTTTGGGATTTAAAT+TGG - chr2_1:40305166-40305185 None:intergenic 25.0%
!! ATTGTTAACTCGAAGATTTT+GGG - chr2_1:40305177-40305196 None:intergenic 25.0%
!! AATTGTTAACTCGAAGATTT+TGG - chr2_1:40305178-40305197 None:intergenic 25.0%
! GCATAGTAATACTAGAATAA+GGG - chr2_1:40305389-40305408 None:intergenic 25.0%
! TGCATAGTAATACTAGAATA+AGG - chr2_1:40305390-40305409 None:intergenic 25.0%
!! AATTTTGTAGAACTGAAAAG+GGG - chr2_1:40305490-40305509 None:intergenic 25.0%
! ACAGAGAATAAAATGTTAAC+TGG - chr2_1:40305635-40305654 None:intergenic 25.0%
! AAATGGGGATTCATATTAAA+TGG - chr2_1:40305681-40305700 None:intergenic 25.0%
! TAAGAGCAGAAAATGTTAAA+TGG - chr2_1:40305786-40305805 None:intergenic 25.0%
! TGAGATTTACAATTCTGATT+GGG - chr2_1:40306201-40306220 None:intergenic 25.0%
! TTACATTATTGACAGAAGAA+AGG + chr2_1:40306566-40306585 Msa0207670:intron 25.0%
! TACATTATTGACAGAAGAAA+GGG + chr2_1:40306567-40306586 Msa0207670:intron 25.0%
! TTAATTGAATGCTGTACTAA+TGG - chr2_1:40306634-40306653 None:intergenic 25.0%
! TTAGTACAGCATTCAATTAA+TGG + chr2_1:40306634-40306653 Msa0207670:intron 25.0%
! ATAAAATGATGATCTTGGTT+AGG + chr2_1:40306674-40306693 Msa0207670:intron 25.0%
! TAAAATGATGATCTTGGTTA+GGG + chr2_1:40306675-40306694 Msa0207670:intron 25.0%
! TTCATGAGTGAATGTAAAAA+AGG + chr2_1:40307013-40307032 Msa0207670:intron 25.0%
! TCATGAGTGAATGTAAAAAA+GGG + chr2_1:40307014-40307033 Msa0207670:intron 25.0%
! AGGAATTCAATATTGAAAAG+TGG - chr2_1:40307215-40307234 None:intergenic 25.0%
! CAATATTGAATTCCTAAAAC+AGG + chr2_1:40307220-40307239 Msa0207670:intron 25.0%
!! GAAAGCATAATAATCCTAAT+GGG - chr2_1:40307297-40307316 None:intergenic 25.0%
!! TGAAAGCATAATAATCCTAA+TGG - chr2_1:40307298-40307317 None:intergenic 25.0%
! ACAATAATGACTAAGCAATA+TGG - chr2_1:40307349-40307368 None:intergenic 25.0%
! AATTAGCATGACATATTTGT+TGG + chr2_1:40307573-40307592 Msa0207670:intron 25.0%
!!! TTTATTTTCTATTTACGGGA+AGG - chr2_1:40307798-40307817 None:intergenic 25.0%
! ATGAAAATACTATAATCGCT+TGG - chr2_1:40307851-40307870 None:intergenic 25.0%
! CTTGCAGATACAATTTAATA+GGG - chr2_1:40308084-40308103 None:intergenic 25.0%
! CAATCAATTCATATGAACAA+AGG - chr2_1:40308238-40308257 None:intergenic 25.0%
! GATTGATGTTTGTATATATC+TGG + chr2_1:40308253-40308272 Msa0207670:intron 25.0%
! TCCGAATTTATGATTTGAAT+CGG + chr2_1:40308322-40308341 Msa0207670:CDS 25.0%
! ATATACAAAAACGACAACAA+CGG - chr2_1:40308497-40308516 None:intergenic 25.0%
! TTTGATATAAACATGAAGCT+TGG + chr2_1:40308543-40308562 Msa0207670:intron 25.0%
! GTAAGTAACAATAAGTTAGT+TGG + chr2_1:40308741-40308760 Msa0207670:intron 25.0%
! CATAACCTTAAAAAAGAACA+TGG - chr2_1:40308767-40308786 None:intergenic 25.0%
!!! TCATGTTTTTGATTTCCATA+CGG + chr2_1:40308930-40308949 Msa0207670:CDS 25.0%
! AGATCCTATTATTACCTATA+TGG - chr2_1:40309244-40309263 None:intergenic 25.0%
!! TAGGATCTAAAACCAAAATA+AGG + chr2_1:40309256-40309275 Msa0207670:intron 25.0%
!!! ATATGATTTGGTCCTTATTT+TGG - chr2_1:40309271-40309290 None:intergenic 25.0%
! AGAACATAGGAAATATGATT+TGG - chr2_1:40309283-40309302 None:intergenic 25.0%
! AAATCATATTTCCTATGTTC+TGG + chr2_1:40309282-40309301 Msa0207670:intron 25.0%
! TAAAACAATGGCAAGAAAAA+GGG - chr2_1:40309756-40309775 None:intergenic 25.0%
! ATGCTAAAATGGTAAAACAA+TGG - chr2_1:40309768-40309787 None:intergenic 25.0%
! GTTCAAATATCATGCTAAAA+TGG - chr2_1:40309779-40309798 None:intergenic 25.0%
! TTTACTCAGATTCATTATGT+CGG - chr2_1:40309997-40310016 None:intergenic 25.0%
! TTGATAGTATGAAACCCTAA+AGG - chr2_1:40303854-40303873 None:intergenic 30.0%
CTAATAAGAAAGAAACCATC+AGG - chr2_1:40304004-40304023 None:intergenic 30.0%
GATTTGGGAATTGTAGATTA+TGG + chr2_1:40304047-40304066 Msa0207670:intron 30.0%
! ATTGGATTGGAACATTTGAA+GGG + chr2_1:40304295-40304314 Msa0207670:CDS 30.0%
CACTAAACATACTGAAAGAA+AGG - chr2_1:40304419-40304438 None:intergenic 30.0%
ATAGGAAAGTTAACCCAAAA+AGG + chr2_1:40304669-40304688 Msa0207670:intron 30.0%
AAAAAATTTACGAGTCCTTG+TGG + chr2_1:40304731-40304750 Msa0207670:intron 30.0%
AAAAATTTACGAGTCCTTGT+GGG + chr2_1:40304732-40304751 Msa0207670:intron 30.0%
TTACCGTCATAAATGATATG+CGG + chr2_1:40304813-40304832 Msa0207670:intron 30.0%
GATTACTTGATCAATCCAAA+TGG - chr2_1:40304856-40304875 None:intergenic 30.0%
GTTCCATCACATTACATTAT+AGG + chr2_1:40305003-40305022 Msa0207670:intron 30.0%
!! ACATACTTGTTGTCTAAACT+TGG + chr2_1:40305116-40305135 Msa0207670:intron 30.0%
!! CATACTTGTTGTCTAAACTT+GGG + chr2_1:40305117-40305136 Msa0207670:intron 30.0%
!!! GTGTCACTTACACTATTTTT+GGG - chr2_1:40305263-40305282 None:intergenic 30.0%
!!! AGTGTCACTTACACTATTTT+TGG - chr2_1:40305264-40305283 None:intergenic 30.0%
!!! TATTTTTGGAGCAAAAAGAG+CGG - chr2_1:40305324-40305343 None:intergenic 30.0%
ATCTGTCATAAGATCGAAAT+GGG - chr2_1:40305570-40305589 None:intergenic 30.0%
GATTAAATGCTGAATCCAAA+AGG - chr2_1:40305756-40305775 None:intergenic 30.0%
TCAGTAAAGAACAAAGTGAA+GGG - chr2_1:40305880-40305899 None:intergenic 30.0%
TTCAGTAAAGAACAAAGTGA+AGG - chr2_1:40305881-40305900 None:intergenic 30.0%
GTCAATTATGAATACGATCA+AGG - chr2_1:40306030-40306049 None:intergenic 30.0%
AACCTTGTGAACTTATGATT+TGG - chr2_1:40306052-40306071 None:intergenic 30.0%
AAATCATAAGTTCACAAGGT+TGG + chr2_1:40306051-40306070 Msa0207670:intron 30.0%
GTGAGATTTACAATTCTGAT+TGG - chr2_1:40306202-40306221 None:intergenic 30.0%
ATCAGAATTGTAAATCTCAC+CGG + chr2_1:40306202-40306221 Msa0207670:intron 30.0%
GAAGGATTATAGTGTTCTTT+AGG - chr2_1:40306301-40306320 None:intergenic 30.0%
AAAGAACACTATAATCCTTC+TGG + chr2_1:40306301-40306320 Msa0207670:intron 30.0%
TGTGGTATGCAATTATGTTT+GGG - chr2_1:40306476-40306495 None:intergenic 30.0%
TAATTTCTATGTGTCTAGTG+TGG - chr2_1:40306494-40306513 None:intergenic 30.0%
GTTGCATAAAATGATGATCT+TGG + chr2_1:40306669-40306688 Msa0207670:intron 30.0%
!!! GAGTAGTGAGGTTTTAAAAA+AGG + chr2_1:40306729-40306748 Msa0207670:intron 30.0%
AAAATTGCATCAAATACACC+CGG - chr2_1:40306818-40306837 None:intergenic 30.0%
! TGCAATTTTCTGCAATATCA+AGG + chr2_1:40306829-40306848 Msa0207670:intron 30.0%
TATAAGAAATGTTTCCACCA+CGG - chr2_1:40306867-40306886 None:intergenic 30.0%
ATACTAGTTGAGAAGTCATT+TGG - chr2_1:40306925-40306944 None:intergenic 30.0%
! TCATGCATTTTACATGTTTC+AGG - chr2_1:40306963-40306982 None:intergenic 30.0%
! CAGAAATCAATTCCTGTTTT+AGG - chr2_1:40307235-40307254 None:intergenic 30.0%
TTCAATGGTTTAAACCCATT+AGG + chr2_1:40307280-40307299 Msa0207670:intron 30.0%
TAATGACTAAGCAATATGGA+AGG - chr2_1:40307345-40307364 None:intergenic 30.0%
ATATCAGAGTGTGATACTAA+AGG - chr2_1:40307450-40307469 None:intergenic 30.0%
TGCAAATTGTGAAAGAAACA+CGG - chr2_1:40307705-40307724 None:intergenic 30.0%
TTTGCATGACTGATATTTGT+TGG + chr2_1:40307719-40307738 Msa0207670:intron 30.0%
!!! TGGTATTCATTTTGGTTGAT+CGG + chr2_1:40307739-40307758 Msa0207670:intron 30.0%
ATAATCGCTTGGTAAATTCT+AGG - chr2_1:40307840-40307859 None:intergenic 30.0%
TTGGTAGATGAATTCAGTTA+TGG - chr2_1:40307878-40307897 None:intergenic 30.0%
CCATAAATGAATTCAGCTAT+TGG - chr2_1:40307897-40307916 None:intergenic 30.0%
CCAATAGCTGAATTCATTTA+TGG + chr2_1:40307894-40307913 Msa0207670:intron 30.0%
AAATCTTGATTCTTTGAGCA+AGG + chr2_1:40307992-40308011 Msa0207670:intron 30.0%
GCTTGCAGATACAATTTAAT+AGG - chr2_1:40308085-40308104 None:intergenic 30.0%
ATTACAAAACAAGCTTATCC+TGG + chr2_1:40308126-40308145 Msa0207670:intron 30.0%
ATTATCACTTAATCTATGCC+AGG - chr2_1:40308147-40308166 None:intergenic 30.0%
! TAAAGAACAAGGCATTAACA+AGG - chr2_1:40308201-40308220 None:intergenic 30.0%
CAATTCATATGAACAAAGGT+GGG - chr2_1:40308234-40308253 None:intergenic 30.0%
TCAATTCATATGAACAAAGG+TGG - chr2_1:40308235-40308254 None:intergenic 30.0%
! GCCGATTCAAATCATAAATT+CGG - chr2_1:40308326-40308345 None:intergenic 30.0%
TACATGAACTCAATATAGTC+TGG - chr2_1:40308419-40308438 None:intergenic 30.0%
! ATTGAGTTCATGTACTGATA+TGG + chr2_1:40308425-40308444 Msa0207670:CDS 30.0%
! TTGAGTTCATGTACTGATAT+GGG + chr2_1:40308426-40308445 Msa0207670:CDS 30.0%
!! GAATCTTGTTGATAATTCAC+AGG + chr2_1:40308581-40308600 Msa0207670:intron 30.0%
GATGTTGTCAATCATCAAAA+AGG - chr2_1:40308790-40308809 None:intergenic 30.0%
!! ACAAACTTGTTACCAAACTT+GGG - chr2_1:40308886-40308905 None:intergenic 30.0%
!! AACAAACTTGTTACCAAACT+TGG - chr2_1:40308887-40308906 None:intergenic 30.0%
!!! CATGTTTTTGATTTCCATAC+GGG + chr2_1:40308931-40308950 Msa0207670:CDS 30.0%
!!! GCATTTTTTTCGATTTCTCA+AGG - chr2_1:40309100-40309119 None:intergenic 30.0%
!!! AATGCTTCTGATTGTTGTTT+TGG + chr2_1:40309115-40309134 Msa0207670:intron 30.0%
ATTAATCCTTGCAATATCTG+TGG + chr2_1:40309172-40309191 Msa0207670:intron 30.0%
!! TCGCTATATGTTTTGTTCTA+GGG - chr2_1:40309215-40309234 None:intergenic 30.0%
TATAGCGACTAATTCCATAT+AGG + chr2_1:40309227-40309246 Msa0207670:intron 30.0%
TTTAGTTATCAAAAGATGCC+AGG - chr2_1:40309373-40309392 None:intergenic 30.0%
! GTTTGGTTTAATTCATTGTG+TGG + chr2_1:40309404-40309423 Msa0207670:intron 30.0%
AAATATTACGGTGTTCTATC+TGG + chr2_1:40309438-40309457 Msa0207670:intron 30.0%
GTAAAACAATGGCAAGAAAA+AGG - chr2_1:40309757-40309776 None:intergenic 30.0%
TTAGCATGATATTTGAACCT+TGG + chr2_1:40309781-40309800 Msa0207670:three_prime_UTR 30.0%
TAGCATGATATTTGAACCTT+GGG + chr2_1:40309782-40309801 Msa0207670:three_prime_UTR 30.0%
!!! TTTTAATTTCAGGGAGTTTG+TGG + chr2_1:40309912-40309931 Msa0207670:three_prime_UTR 30.0%
! TTTAATTTCAGGGAGTTTGT+GGG + chr2_1:40309913-40309932 Msa0207670:three_prime_UTR 30.0%
AATCTGAGTAAACAGAAATG+CGG + chr2_1:40310005-40310024 Msa0207670:three_prime_UTR 30.0%
TCTCTTATACTGTGACTAGT+CGG - chr2_1:40303515-40303534 None:intergenic 35.0%
!!! CTCAAAGCTCTGGAAATTTT+GGG - chr2_1:40303725-40303744 None:intergenic 35.0%
! CAAAATTTCCAGAGCTTTGA+GGG + chr2_1:40303724-40303743 Msa0207670:five_prime_UTR 35.0%
TTACGAAAAGTAACACAGGT+GGG - chr2_1:40303772-40303791 None:intergenic 35.0%
ATGATTGATGGAAACGGTAA+CGG - chr2_1:40303800-40303819 None:intergenic 35.0%
CTGTAAAAGAGATCAACAAC+TGG - chr2_1:40303971-40303990 None:intergenic 35.0%
TTTCTTATTAGCGCAAGCAA+AGG + chr2_1:40304013-40304032 Msa0207670:CDS 35.0%
!! GCAAGCAAAGGTATTATTCT+TGG + chr2_1:40304025-40304044 Msa0207670:intron 35.0%
! GATTGGATTGGAACATTTGA+AGG + chr2_1:40304294-40304313 Msa0207670:CDS 35.0%
GAGTTTATAAATGACCCACA+AGG - chr2_1:40304749-40304768 None:intergenic 35.0%
! AGTTGGCCTAATACTATATG+AGG + chr2_1:40304787-40304806 Msa0207670:intron 35.0%
! CACTATCTTTTTCCACCATT+TGG + chr2_1:40304838-40304857 Msa0207670:intron 35.0%
TACTTGATCAATCCAAATGG+TGG - chr2_1:40304853-40304872 None:intergenic 35.0%
GACTCTATGATAAGATGCAT+GGG - chr2_1:40304878-40304897 None:intergenic 35.0%
AGACTCTATGATAAGATGCA+TGG - chr2_1:40304879-40304898 None:intergenic 35.0%
TTATCATAGAGTCTCCATAC+TGG + chr2_1:40304885-40304904 Msa0207670:intron 35.0%
! ATGTAATGTGATGGAACAGT+AGG - chr2_1:40305000-40305019 None:intergenic 35.0%
! TTTTGGCGTGCATAATTATC+AGG - chr2_1:40305044-40305063 None:intergenic 35.0%
ATTCTATGTGTGGTCTAGAT+TGG - chr2_1:40305208-40305227 None:intergenic 35.0%
AGAATCCCGATTTAGTGTAA+TGG + chr2_1:40305223-40305242 Msa0207670:intron 35.0%
GAATCCCGATTTAGTGTAAT+GGG + chr2_1:40305224-40305243 Msa0207670:intron 35.0%
AATCCCGATTTAGTGTAATG+GGG + chr2_1:40305225-40305244 Msa0207670:intron 35.0%
!!! TTTTTTTTTTCTAACCCCCG+CGG + chr2_1:40305294-40305313 Msa0207670:intron 35.0%
!! GGTATTTTCGAGGAAAAAAG+TGG - chr2_1:40305368-40305387 None:intergenic 35.0%
!!! CTAGAATAAGGGTATTTTCG+AGG - chr2_1:40305378-40305397 None:intergenic 35.0%
! TTGGTAGCATCTTTCAATCT+TGG + chr2_1:40305435-40305454 Msa0207670:intron 35.0%
TGGATAAGATCATTCGATCT+TGG + chr2_1:40305513-40305532 Msa0207670:intron 35.0%
TCTGTCATAAGATCGAAATG+GGG - chr2_1:40305569-40305588 None:intergenic 35.0%
GATCTGTCATAAGATCGAAA+TGG - chr2_1:40305571-40305590 None:intergenic 35.0%
CAAAAGTCTACACAAACTCA+TGG - chr2_1:40305998-40306017 None:intergenic 35.0%
GACCAAATCATAAGTTCACA+AGG + chr2_1:40306047-40306066 Msa0207670:intron 35.0%
AAACAAAACTGCAGAAACTC+AGG + chr2_1:40306080-40306099 Msa0207670:intron 35.0%
! TTGTAATTTCTGGATGTGTC+CGG - chr2_1:40306224-40306243 None:intergenic 35.0%
AACACTATAATCCTTCTGGA+AGG + chr2_1:40306305-40306324 Msa0207670:intron 35.0%
TTATCTATTCACCTTCCAGA+AGG - chr2_1:40306319-40306338 None:intergenic 35.0%
CTGAGTTCATGATTGTAGAT+AGG - chr2_1:40306369-40306388 None:intergenic 35.0%
GTGTGGTATGCAATTATGTT+TGG - chr2_1:40306477-40306496 None:intergenic 35.0%
GTACAGCATTCAATTAATGG+TGG + chr2_1:40306637-40306656 Msa0207670:intron 35.0%
ACATCAAAAACCTAGACACT+GGG - chr2_1:40306775-40306794 None:intergenic 35.0%
TGAATATGCACTGTAATTCG+TGG - chr2_1:40306988-40307007 None:intergenic 35.0%
!!! TACACTAGCATTTTTTGCAG+TGG + chr2_1:40307381-40307400 Msa0207670:intron 35.0%
ATACTAAAGGACTAATGCAG+GGG - chr2_1:40307437-40307456 None:intergenic 35.0%
GATACTAAAGGACTAATGCA+GGG - chr2_1:40307438-40307457 None:intergenic 35.0%
TGATACTAAAGGACTAATGC+AGG - chr2_1:40307439-40307458 None:intergenic 35.0%
! AAAGTTTGGGATGCATTAAC+AGG + chr2_1:40307608-40307627 Msa0207670:CDS 35.0%
GCAAATTGTGAAAGAAACAC+GGG - chr2_1:40307704-40307723 None:intergenic 35.0%
! TTGTACTGTAGTTGTCACTT+TGG + chr2_1:40307956-40307975 Msa0207670:intron 35.0%
! AATGCCTTGTTCTTTATCTG+AGG + chr2_1:40308205-40308224 Msa0207670:intron 35.0%
GTATCCTCAGATAAAGAACA+AGG - chr2_1:40308212-40308231 None:intergenic 35.0%
GATTTATCCACTTCTTTAGG+AGG - chr2_1:40308357-40308376 None:intergenic 35.0%
AACAAGATTCAGTGCAATAG+AGG - chr2_1:40308571-40308590 None:intergenic 35.0%
!! TGTTGATAATTCACAGGCTA+TGG + chr2_1:40308587-40308606 Msa0207670:intron 35.0%
!! GTTGATAATTCACAGGCTAT+GGG + chr2_1:40308588-40308607 Msa0207670:intron 35.0%
!! ATGGTTCTACTGTCAAGTTT+TGG + chr2_1:40308707-40308726 Msa0207670:CDS 35.0%
!! TGGTTCTACTGTCAAGTTTT+GGG + chr2_1:40308708-40308727 Msa0207670:CDS 35.0%
!!! GTTGGCCATGTTCTTTTTTA+AGG + chr2_1:40308759-40308778 Msa0207670:intron 35.0%
AATCCATAGCTGAAAATCAC+AGG - chr2_1:40308814-40308833 None:intergenic 35.0%
! TGTGATTTTCAGCTATGGAT+TGG + chr2_1:40308813-40308832 Msa0207670:intron 35.0%
!! TTTGGTAACAAGTTTGTTGC+TGG + chr2_1:40308889-40308908 Msa0207670:CDS 35.0%
!! TTGGTAACAAGTTTGTTGCT+GGG + chr2_1:40308890-40308909 Msa0207670:CDS 35.0%
! TAACTGACTCATGCTTTGTA+GGG - chr2_1:40309069-40309088 None:intergenic 35.0%
!! GTCGCTATATGTTTTGTTCT+AGG - chr2_1:40309216-40309235 None:intergenic 35.0%
AAATAGTTGGTCCAGAACAT+AGG - chr2_1:40309296-40309315 None:intergenic 35.0%
!!! TTTGTTTTACACTTCTGACC+TGG + chr2_1:40309352-40309371 Msa0207670:intron 35.0%
TCTGATTCATCATGAGTCAA+TGG - chr2_1:40309583-40309602 None:intergenic 35.0%
! ATTGACTCATGATGAATCAG+AGG + chr2_1:40309582-40309601 Msa0207670:CDS 35.0%
TTGACTCATGATGAATCAGA+GGG + chr2_1:40309583-40309602 Msa0207670:CDS 35.0%
CATATAATGAATTGACGAGC+TGG + chr2_1:40309863-40309882 Msa0207670:three_prime_UTR 35.0%
! TTATACTGTGACTAGTCGGA+CGG - chr2_1:40303511-40303530 None:intergenic 40.0%
TAGTCACAGTATAAGAGAGC+AGG + chr2_1:40303517-40303536 Msa0207670:five_prime_UTR 40.0%
GTATAAGAGAGCAGGTCATA+AGG + chr2_1:40303525-40303544 Msa0207670:five_prime_UTR 40.0%
!!! CCTCAAAGCTCTGGAAATTT+TGG - chr2_1:40303726-40303745 None:intergenic 40.0%
CCAAAATTTCCAGAGCTTTG+AGG + chr2_1:40303723-40303742 Msa0207670:five_prime_UTR 40.0%
GTTACGAAAAGTAACACAGG+TGG - chr2_1:40303773-40303792 None:intergenic 40.0%
! GGTGTTACGAAAAGTAACAC+AGG - chr2_1:40303776-40303795 None:intergenic 40.0%
! AGTGCTGTTGTTGTTCCTTT+AGG + chr2_1:40303836-40303855 Msa0207670:five_prime_UTR 40.0%
! GTGCTGTTGTTGTTCCTTTA+GGG + chr2_1:40303837-40303856 Msa0207670:five_prime_UTR 40.0%
! ACTGTACCTCTTGTTTGTCA+CGG + chr2_1:40303935-40303954 Msa0207670:CDS 40.0%
AAGAAACCATCAGGAGTAAC+AGG - chr2_1:40303995-40304014 None:intergenic 40.0%
! GGAACATTTGAAGGGCATAA+AGG + chr2_1:40304303-40304322 Msa0207670:CDS 40.0%
! TGCTGTTTGGAGTTGTTGTT+TGG + chr2_1:40304326-40304345 Msa0207670:CDS 40.0%
GCACCGCATATCATTTATGA+CGG - chr2_1:40304819-40304838 None:intergenic 40.0%
CTAAATCGGGATTCTATGTG+TGG - chr2_1:40305218-40305237 None:intergenic 40.0%
CAACCCCATTACACTAAATC+GGG - chr2_1:40305231-40305250 None:intergenic 40.0%
CCAACCCCATTACACTAAAT+CGG - chr2_1:40305232-40305251 None:intergenic 40.0%
! CGATTTAGTGTAATGGGGTT+GGG + chr2_1:40305230-40305249 Msa0207670:intron 40.0%
AACAGTCAAAGTCTCGAGAA+GGG - chr2_1:40305849-40305868 None:intergenic 40.0%
TAACAGTCAAAGTCTCGAGA+AGG - chr2_1:40305850-40305869 None:intergenic 40.0%
! ACAGGGTGGTTTGTAATTTC+TGG - chr2_1:40306234-40306253 None:intergenic 40.0%
ATGTTATGCTACAAGTGGCT+GGG - chr2_1:40306263-40306282 None:intergenic 40.0%
AGCCACTTGTAGCATAACAT+GGG + chr2_1:40306263-40306282 Msa0207670:intron 40.0%
AAGTGAAACTTTGCTGCGAT+TGG - chr2_1:40306608-40306627 None:intergenic 40.0%
AGCATTCAATTAATGGTGGC+AGG + chr2_1:40306641-40306660 Msa0207670:intron 40.0%
GCATTCAATTAATGGTGGCA+GGG + chr2_1:40306642-40306661 Msa0207670:intron 40.0%
ATGATGATCTTGGTTAGGGA+TGG + chr2_1:40306679-40306698 Msa0207670:intron 40.0%
TGATGATCTTGGTTAGGGAT+GGG + chr2_1:40306680-40306699 Msa0207670:intron 40.0%
!! GTGTTGACGAATGTTTTCAG+AGG + chr2_1:40306705-40306724 Msa0207670:intron 40.0%
CATCAAAAACCTAGACACTG+GGG - chr2_1:40306774-40306793 None:intergenic 40.0%
GACATCAAAAACCTAGACAC+TGG - chr2_1:40306776-40306795 None:intergenic 40.0%
TAGTTGAGAAGTCATTTGGC+TGG - chr2_1:40306921-40306940 None:intergenic 40.0%
GAATGTAAAAAAGGGCAACC+CGG + chr2_1:40307022-40307041 Msa0207670:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr2_1:40307088-40307107 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - chr2_1:40307114-40307133 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG + chr2_1:40307112-40307131 Msa0207670:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG - chr2_1:40307119-40307138 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - chr2_1:40307120-40307139 None:intergenic 40.0%
GTTTGTGTGCAGCAAAGTTT+GGG + chr2_1:40307595-40307614 Msa0207670:intron 40.0%
TCTAGGCATGCACACTTTAA+TGG - chr2_1:40307823-40307842 None:intergenic 40.0%
GTTTGTATATATCTGGGAGC+AGG + chr2_1:40308260-40308279 Msa0207670:intron 40.0%
GGGGATTTATCCACTTCTTT+AGG - chr2_1:40308360-40308379 None:intergenic 40.0%
AAAGAAGTGGATAAATCCCC+TGG + chr2_1:40308360-40308379 Msa0207670:CDS 40.0%
! AGTTCATGTACTGATATGGG+AGG + chr2_1:40308429-40308448 Msa0207670:CDS 40.0%
GACCATACTATGTTGACAGT+TGG + chr2_1:40308471-40308490 Msa0207670:intron 40.0%
CGCTATATTACAACTGCTGA+TGG + chr2_1:40308688-40308707 Msa0207670:CDS 40.0%
! TCACCTGTGATTTTCAGCTA+TGG + chr2_1:40308808-40308827 Msa0207670:intron 40.0%
!! TGGTAACAAGTTTGTTGCTG+GGG + chr2_1:40308891-40308910 Msa0207670:CDS 40.0%
GTGAACTTGTGTATGCTACA+CGG - chr2_1:40309029-40309048 None:intergenic 40.0%
! AACTGACTCATGCTTTGTAG+GGG - chr2_1:40309068-40309087 None:intergenic 40.0%
! CTAACTGACTCATGCTTTGT+AGG - chr2_1:40309070-40309089 None:intergenic 40.0%
CATGATCCACAGATATTGCA+AGG - chr2_1:40309181-40309200 None:intergenic 40.0%
TATTCTGATGGTTCCATCCT+CGG - chr2_1:40309548-40309567 None:intergenic 40.0%
AGGATGGAACCATCAGAATA+TGG + chr2_1:40309548-40309567 Msa0207670:CDS 40.0%
TCAGAGGGTTTATCACCAAA+TGG + chr2_1:40309598-40309617 Msa0207670:CDS 40.0%
TTTATCACCAAATGGAACCC+TGG + chr2_1:40309606-40309625 Msa0207670:CDS 40.0%
! ATTTGCCTTCTCCTTTTCCA+GGG - chr2_1:40309626-40309645 None:intergenic 40.0%
! TGAGGGTTTTCATATTGCAG+AGG + chr2_1:40309672-40309691 Msa0207670:CDS 40.0%
ATGAATTGACGAGCTGGTTA+AGG + chr2_1:40309869-40309888 Msa0207670:three_prime_UTR 40.0%
GGTAGAAGTAACACAGAGCT+GGG - chr2_1:40303583-40303602 None:intergenic 45.0%
!! TTTCCAGAGCTTTGAGGGTT+AGG + chr2_1:40303729-40303748 Msa0207670:five_prime_UTR 45.0%
! ATTGATGGAAACGGTAACGG+CGG - chr2_1:40303797-40303816 None:intergenic 45.0%
TACAGTCCTGTTACTCCTGA+TGG + chr2_1:40303986-40304005 Msa0207670:CDS 45.0%
TAGATGCTAGTCCTATGCTG+AGG + chr2_1:40304256-40304275 Msa0207670:intron 45.0%
!! AAGGGCATAAAGGTGCTGTT+TGG + chr2_1:40304313-40304332 Msa0207670:CDS 45.0%
GCACGTGTTGGATGTTTATC+CGG - chr2_1:40304608-40304627 None:intergenic 45.0%
! ATGTGATGGAACAGTAGGCT+AGG - chr2_1:40304995-40305014 None:intergenic 45.0%
GGCGTGCATAATTATCAGGT+TGG - chr2_1:40305040-40305059 None:intergenic 45.0%
! CCGATTTAGTGTAATGGGGT+TGG + chr2_1:40305229-40305248 Msa0207670:intron 45.0%
GAAAAAAGTGGACGTGGTTG+GGG - chr2_1:40305356-40305375 None:intergenic 45.0%
GGAAAAAAGTGGACGTGGTT+GGG - chr2_1:40305357-40305376 None:intergenic 45.0%
AGGAAAAAAGTGGACGTGGT+TGG - chr2_1:40305358-40305377 None:intergenic 45.0%
TTCGAGGAAAAAAGTGGACG+TGG - chr2_1:40305362-40305381 None:intergenic 45.0%
CATGTTATGCTACAAGTGGC+TGG - chr2_1:40306264-40306283 None:intergenic 45.0%
CAGCCACTTGTAGCATAACA+TGG + chr2_1:40306262-40306281 Msa0207670:intron 45.0%
GACCCATGTTATGCTACAAG+TGG - chr2_1:40306268-40306287 None:intergenic 45.0%
TTGGGCACTACATCTCTTCA+TGG - chr2_1:40306458-40306477 None:intergenic 45.0%
CACCTTCCAGAAGCAATGTT+GGG - chr2_1:40306536-40306555 None:intergenic 45.0%
CATTTGGCTGGAATCACTGT+GGG - chr2_1:40306909-40306928 None:intergenic 45.0%
TCATTTGGCTGGAATCACTG+TGG - chr2_1:40306910-40306929 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr2_1:40307089-40307108 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr2_1:40307092-40307111 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr2_1:40307123-40307142 Msa0207670:intron 45.0%
GGTTTGTGTGCAGCAAAGTT+TGG + chr2_1:40307594-40307613 Msa0207670:intron 45.0%
!!! CAGAGCATGTGCTTTTTCTG+AGG + chr2_1:40307667-40307686 Msa0207670:CDS 45.0%
TTGAGCAAGGACTGAGTGTA+TGG + chr2_1:40308005-40308024 Msa0207670:intron 45.0%
TGAGCAAGGACTGAGTGTAT+GGG + chr2_1:40308006-40308025 Msa0207670:intron 45.0%
! ATACCCACCTTTTGCTCACT+GGG + chr2_1:40308283-40308302 Msa0207670:CDS 45.0%
! ACTTCTTTAGGAGGTGCATC+AGG - chr2_1:40308348-40308367 None:intergenic 45.0%
TGATGCACCTCCTAAAGAAG+TGG + chr2_1:40308347-40308366 Msa0207670:CDS 45.0%
ATAAATCCCCTGGTTCAGTC+AGG + chr2_1:40308370-40308389 Msa0207670:CDS 45.0%
GGCCAACTGTCAACATAGTA+TGG - chr2_1:40308476-40308495 None:intergenic 45.0%
AGGCTATGGGATGTAAGAAC+TGG + chr2_1:40308601-40308620 Msa0207670:intron 45.0%
CTCACTTCAGCACTAGTCAT+AGG - chr2_1:40308658-40308677 None:intergenic 45.0%
CTATGACATGCCTTGCAATG+TGG + chr2_1:40308843-40308862 Msa0207670:CDS 45.0%
! GAAGCTGATTCCACATTGCA+AGG - chr2_1:40308856-40308875 None:intergenic 45.0%
!! GGTAACAAGTTTGTTGCTGG+GGG + chr2_1:40308892-40308911 Msa0207670:CDS 45.0%
TAGGGGGGAAAAGTTGAAAC+TGG - chr2_1:40309051-40309070 None:intergenic 45.0%
! ACTGACTCATGCTTTGTAGG+GGG - chr2_1:40309067-40309086 None:intergenic 45.0%
TACGGTGTTCTATCTGGTGA+TGG + chr2_1:40309444-40309463 Msa0207670:intron 45.0%
GCATGCAACAAAGGACATCA+TGG + chr2_1:40309469-40309488 Msa0207670:intron 45.0%
ACCATCAGAATATGGCAGAC+AGG + chr2_1:40309556-40309575 Msa0207670:CDS 45.0%
CCATCAGAATATGGCAGACA+GGG + chr2_1:40309557-40309576 Msa0207670:CDS 45.0%
ACCAAATGGAACCCTGGAAA+AGG + chr2_1:40309612-40309631 Msa0207670:CDS 45.0%
! TCCTTTTCCAGGGTTCCATT+TGG - chr2_1:40309616-40309635 None:intergenic 45.0%
! CATTTGCCTTCTCCTTTTCC+AGG - chr2_1:40309627-40309646 None:intergenic 45.0%
AAAGGAGAAGGCAAATGCAG+AGG + chr2_1:40309630-40309649 Msa0207670:CDS 45.0%
! GGGTTTTCATATTGCAGAGG+AGG + chr2_1:40309675-40309694 Msa0207670:CDS 45.0%
CTCTTCCTTTCCTTTGGACT+TGG - chr2_1:40309701-40309720 None:intergenic 45.0%
CAAGTCCAAAGGAAAGGAAG+AGG + chr2_1:40309699-40309718 Msa0207670:CDS 45.0%
CATGTATATTAGAGGGCCCA+AGG - chr2_1:40309801-40309820 None:intergenic 45.0%
TCAGCGAGATATTCTCTGCA+GGG - chr2_1:40310037-40310056 None:intergenic 45.0%
TGCAGAGAATATCTCGCTGA+GGG + chr2_1:40310037-40310056 Msa0207670:three_prime_UTR 45.0%
!!! ACAATTTTTTTTTTTTTTTT+CGG - chr2_1:40303448-40303467 None:intergenic 5.0%
AAGTAACACAGAGCTGGGAG+AGG - chr2_1:40303578-40303597 None:intergenic 50.0%
GGGTAGAAGTAACACAGAGC+TGG - chr2_1:40303584-40303603 None:intergenic 50.0%
GAGTGACCGTGACAAACAAG+AGG - chr2_1:40303944-40303963 None:intergenic 50.0%
GCTAGTCCTATGCTGAGGAA+TGG + chr2_1:40304261-40304280 Msa0207670:CDS 50.0%
GTCTCTCCATTCCTCAGCAT+AGG - chr2_1:40304270-40304289 None:intergenic 50.0%
ATGCTGAGGAATGGAGAGAC+TGG + chr2_1:40304270-40304289 Msa0207670:CDS 50.0%
GGAATGGAGAGACTGGAGAT+TGG + chr2_1:40304277-40304296 Msa0207670:CDS 50.0%
GGAGAGACTGGAGATTGGAT+TGG + chr2_1:40304282-40304301 Msa0207670:CDS 50.0%
ATGAATGCGAGTGCACGTGT+TGG - chr2_1:40304620-40304639 None:intergenic 50.0%
TGAGGAAGTGGGATCCAGTA+TGG - chr2_1:40304902-40304921 None:intergenic 50.0%
CAAGCGCATGATGAGGAAGT+GGG - chr2_1:40304913-40304932 None:intergenic 50.0%
AGCAAAGCAAGCGCATGATG+AGG - chr2_1:40304920-40304939 None:intergenic 50.0%
CATGCGCTTGCTTTGCTCAT+TGG + chr2_1:40304923-40304942 Msa0207670:intron 50.0%
!!! TGGGGAAAGGGGGGTATTTT+TGG - chr2_1:40305338-40305357 None:intergenic 50.0%
CCAGAAGCAATGTTGGGTGT+GGG - chr2_1:40306530-40306549 None:intergenic 50.0%
TCCAGAAGCAATGTTGGGTG+TGG - chr2_1:40306531-40306550 None:intergenic 50.0%
CACCCAACATTGCTTCTGGA+AGG + chr2_1:40306531-40306550 Msa0207670:intron 50.0%
CCACCTTCCAGAAGCAATGT+TGG - chr2_1:40306537-40306556 None:intergenic 50.0%
! CCAACATTGCTTCTGGAAGG+TGG + chr2_1:40306534-40306553 Msa0207670:intron 50.0%
ACAGAAGAAAGGGACCAGAC+TGG + chr2_1:40306577-40306596 Msa0207670:intron 50.0%
! TGCGATTGGTTGTTCCAGTC+TGG - chr2_1:40306594-40306613 None:intergenic 50.0%
! GTTTTCAGAGGCGAGTAGTG+AGG + chr2_1:40306717-40306736 Msa0207670:intron 50.0%
TGGGGTCACAATCACTGTTG+TGG - chr2_1:40306756-40306775 None:intergenic 50.0%
TGATTGTGACCCCAGTGTCT+AGG + chr2_1:40306762-40306781 Msa0207670:intron 50.0%
TGCATCAAATACACCCGGTG+TGG - chr2_1:40306813-40306832 None:intergenic 50.0%
CACTCGTGAAGTTCAAGTCC+TGG - chr2_1:40307144-40307163 None:intergenic 50.0%
CGGCAGAATGCAATGTGTAG+CGG - chr2_1:40307407-40307426 None:intergenic 50.0%
! GATACCCACCTTTTGCTCAC+TGG + chr2_1:40308282-40308301 Msa0207670:CDS 50.0%
! TACCCACCTTTTGCTCACTG+GGG + chr2_1:40308284-40308303 Msa0207670:CDS 50.0%
AACACTCCTGACTGAACCAG+GGG - chr2_1:40308379-40308398 None:intergenic 50.0%
CAACACTCCTGACTGAACCA+GGG - chr2_1:40308380-40308399 None:intergenic 50.0%
!! GTTCAGTCAGGAGTGTTGCA+TGG + chr2_1:40308382-40308401 Msa0207670:CDS 50.0%
AGCACTAGTCATAGGCGACT+TGG - chr2_1:40308650-40308669 None:intergenic 50.0%
! GACTAGTGCTGAAGTGAGTC+AGG + chr2_1:40308660-40308679 Msa0207670:CDS 50.0%
! AGTGCTGAAGTGAGTCAGGA+TGG + chr2_1:40308664-40308683 Msa0207670:CDS 50.0%
GCTTCGTTAGAGCCCAAGTT+TGG + chr2_1:40308871-40308890 Msa0207670:CDS 50.0%
TTCCATACGGGCGATGAGAT+TGG + chr2_1:40308943-40308962 Msa0207670:CDS 50.0%
TACCAATCTCATCGCCCGTA+TGG - chr2_1:40308948-40308967 None:intergenic 50.0%
CTGACTCATGCTTTGTAGGG+GGG - chr2_1:40309066-40309085 None:intergenic 50.0%
GTGATGGCAGCATGCAACAA+AGG + chr2_1:40309460-40309479 Msa0207670:intron 50.0%
ATGGTCCTGTACACTGTGTC+CGG + chr2_1:40309488-40309507 Msa0207670:CDS 50.0%
ATTCTCCTCCAGGAGAGAAC+CGG - chr2_1:40309510-40309529 None:intergenic 50.0%
GATGCATACGATTCTCCTCC+AGG - chr2_1:40309520-40309539 None:intergenic 50.0%
GGAGGAGAATCGTATGCATC+AGG + chr2_1:40309520-40309539 Msa0207670:CDS 50.0%
ATCGTATGCATCAGGATCCG+AGG + chr2_1:40309528-40309547 Msa0207670:CDS 50.0%
TATGCATCAGGATCCGAGGA+TGG + chr2_1:40309532-40309551 Msa0207670:CDS 50.0%
CCCTGTCTGCCATATTCTGA+TGG - chr2_1:40309560-40309579 None:intergenic 50.0%
TGGAACCCTGGAAAAGGAGA+AGG + chr2_1:40309618-40309637 Msa0207670:CDS 50.0%
GTCCAAAGGAAAGGAAGAGG+CGG + chr2_1:40309702-40309721 Msa0207670:CDS 50.0%
TCCAAAGGAAAGGAAGAGGC+GGG + chr2_1:40309703-40309722 Msa0207670:CDS 50.0%
TCAGGGAGTTTGTGGGATAC+TGG + chr2_1:40309920-40309939 Msa0207670:three_prime_UTR 50.0%
CTCAGCGAGATATTCTCTGC+AGG - chr2_1:40310038-40310057 None:intergenic 50.0%
CTGCAGAGAATATCTCGCTG+AGG + chr2_1:40310036-40310055 Msa0207670:three_prime_UTR 50.0%
GAGAATATCTCGCTGAGGGT+AGG + chr2_1:40310041-40310060 Msa0207670:three_prime_UTR 50.0%
ATATCTCGCTGAGGGTAGGT+TGG + chr2_1:40310045-40310064 Msa0207670:three_prime_UTR 50.0%
TATCTCGCTGAGGGTAGGTT+GGG + chr2_1:40310046-40310065 Msa0207670:three_prime_UTR 50.0%
GTCCAGAACGACAGCGTAAG+AGG + chr2_1:40303466-40303485 Msa0207670:five_prime_UTR 55.0%
CTCCTCTTACGCTGTCGTTC+TGG - chr2_1:40303471-40303490 None:intergenic 55.0%
ACACAGAGCTGGGAGAGGAA+GGG - chr2_1:40303573-40303592 None:intergenic 55.0%
AACACAGAGCTGGGAGAGGA+AGG - chr2_1:40303574-40303593 None:intergenic 55.0%
CCTCCTAACCCTCAAAGCTC+TGG - chr2_1:40303735-40303754 None:intergenic 55.0%
!! CCAGAGCTTTGAGGGTTAGG+AGG + chr2_1:40303732-40303751 Msa0207670:five_prime_UTR 55.0%
GCAAGCGCATGATGAGGAAG+TGG - chr2_1:40304914-40304933 None:intergenic 55.0%
ACTGTGTCCCTTCCTCCTAG+TGG + chr2_1:40304969-40304988 Msa0207670:intron 55.0%
GAACAGTAGGCTAGGCCACT+AGG - chr2_1:40304987-40305006 None:intergenic 55.0%
AGTGGACGTGGTTGGGGAAA+GGG - chr2_1:40305350-40305369 None:intergenic 55.0%
AAGTGGACGTGGTTGGGGAA+AGG - chr2_1:40305351-40305370 None:intergenic 55.0%
TGCTACAAGTGGCTGGGTGT+GGG - chr2_1:40306257-40306276 None:intergenic 55.0%
ATGCTACAAGTGGCTGGGTG+TGG - chr2_1:40306258-40306277 None:intergenic 55.0%
CCCACACCCAACATTGCTTC+TGG + chr2_1:40306527-40306546 Msa0207670:intron 55.0%
TCCACGCATAGTGACCACAC+CGG + chr2_1:40306796-40306815 Msa0207670:intron 55.0%
GGCTGGAATCACTGTGGGAT+TGG - chr2_1:40306904-40306923 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG + chr2_1:40307048-40307067 Msa0207670:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG + chr2_1:40307049-40307068 Msa0207670:intron 55.0%
! ACCCACCTTTTGCTCACTGG+GGG + chr2_1:40308285-40308304 Msa0207670:CDS 55.0%
TCCCCCAGTGAGCAAAAGGT+GGG - chr2_1:40308289-40308308 None:intergenic 55.0%
GCAACACTCCTGACTGAACC+AGG - chr2_1:40308381-40308400 None:intergenic 55.0%
!! GTACTGATATGGGAGGCGTC+AGG + chr2_1:40308436-40308455 Msa0207670:CDS 55.0%
!! GCGACTTGGTGTCAAGTGTC+TGG - chr2_1:40308636-40308655 None:intergenic 55.0%
TTGCTGGGGGAGAAGACTTG+TGG + chr2_1:40308905-40308924 Msa0207670:CDS 55.0%
TGCTGGGGGAGAAGACTTGT+GGG + chr2_1:40308906-40308925 Msa0207670:CDS 55.0%
GAGAACCGGACACAGTGTAC+AGG - chr2_1:40309496-40309515 None:intergenic 55.0%
GGAGAAGGCAAATGCAGAGG+AGG + chr2_1:40309633-40309652 Msa0207670:CDS 55.0%
GAAGGCAAATGCAGAGGAGG+AGG + chr2_1:40309636-40309655 Msa0207670:CDS 55.0%
GAGGTTTCGCGCAGGATTGA+GGG + chr2_1:40309655-40309674 Msa0207670:CDS 55.0%
GGAGGCCAAGTCCAAAGGAA+AGG + chr2_1:40309693-40309712 Msa0207670:CDS 55.0%
CCAAAGGAAAGGAAGAGGCG+GGG + chr2_1:40309704-40309723 Msa0207670:CDS 55.0%
CAAAGGAAAGGAAGAGGCGG+GGG + chr2_1:40309705-40309724 Msa0207670:CDS 55.0%
! GACTAGTCGGACGGACGAGA+TGG - chr2_1:40303502-40303521 None:intergenic 60.0%
GGCTAGGCCACTAGGAGGAA+GGG - chr2_1:40304979-40304998 None:intergenic 60.0%
AGGCTAGGCCACTAGGAGGA+AGG - chr2_1:40304980-40304999 None:intergenic 60.0%
CAGTAGGCTAGGCCACTAGG+AGG - chr2_1:40304984-40305003 None:intergenic 60.0%
! GTGTAATGGGGTTGGGCGCT+CGG + chr2_1:40305237-40305256 Msa0207670:intron 60.0%
TGGACGTGGTTGGGGAAAGG+GGG - chr2_1:40305348-40305367 None:intergenic 60.0%
GTGGACGTGGTTGGGGAAAG+GGG - chr2_1:40305349-40305368 None:intergenic 60.0%
AAGTGGCTGGGTGTGGGACA+GGG - chr2_1:40306251-40306270 None:intergenic 60.0%
CCACGCATAGTGACCACACC+GGG + chr2_1:40306797-40306816 Msa0207670:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG - chr2_1:40307044-40307063 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr2_1:40307060-40307079 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr2_1:40307061-40307080 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr2_1:40307060-40307079 Msa0207670:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr2_1:40307061-40307080 Msa0207670:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr2_1:40307076-40307095 None:intergenic 60.0%
CTCCCCCAGTGAGCAAAAGG+TGG - chr2_1:40308290-40308309 None:intergenic 60.0%
CTGCTCCCCCAGTGAGCAAA+AGG - chr2_1:40308293-40308312 None:intergenic 60.0%
CACTGTGTCCGGTTCTCTCC+TGG + chr2_1:40309499-40309518 Msa0207670:CDS 60.0%
TGTGTCCGGTTCTCTCCTGG+AGG + chr2_1:40309502-40309521 Msa0207670:CDS 60.0%
GGAGGTTTCGCGCAGGATTG+AGG + chr2_1:40309654-40309673 Msa0207670:CDS 60.0%
GCAGAGGAGGCCAAGTCCAA+AGG + chr2_1:40309688-40309707 Msa0207670:CDS 60.0%
CCCCGCCTCTTCCTTTCCTT+TGG - chr2_1:40309707-40309726 None:intergenic 60.0%
GCAAACCAATCCCTGCGCCC+TGG + chr2_1:40303547-40303566 Msa0207670:five_prime_UTR 65.0%
AGCTGGGAGAGGAAGGGCCA+GGG - chr2_1:40303567-40303586 None:intergenic 65.0%
AAAAAGAGCGGCGAGCCGCG+GGG - chr2_1:40305312-40305331 None:intergenic 65.0%
CAAAAAGAGCGGCGAGCCGC+GGG - chr2_1:40305313-40305332 None:intergenic 65.0%
GCAAAAAGAGCGGCGAGCCG+CGG - chr2_1:40305314-40305333 None:intergenic 65.0%
GGACGTGGTTGGGGAAAGGG+GGG - chr2_1:40305347-40305366 None:intergenic 65.0%
CAAGTGGCTGGGTGTGGGAC+AGG - chr2_1:40306252-40306271 None:intergenic 65.0%
CCCGGTGTGGTCACTATGCG+TGG - chr2_1:40306800-40306819 None:intergenic 65.0%
CAAGGATCACAGCGCAGCCG+TGG + chr2_1:40306847-40306866 Msa0207670:intron 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG - chr2_1:40307043-40307062 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr2_1:40307054-40307073 Msa0207670:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr2_1:40307055-40307074 Msa0207670:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr2_1:40307059-40307078 Msa0207670:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr2_1:40307074-40307093 Msa0207670:intron 65.0%
CAGAGGAGGAGGTTTCGCGC+AGG + chr2_1:40309647-40309666 Msa0207670:CDS 65.0%
AGGAAAGGAAGAGGCGGGGG+TGG + chr2_1:40309708-40309727 Msa0207670:CDS 65.0%
AAGGGCCAGGGCGCAGGGAT+TGG - chr2_1:40303555-40303574 None:intergenic 70.0%
AGAGGAAGGGCCAGGGCGCA+GGG - chr2_1:40303560-40303579 None:intergenic 70.0%
GAGCTGGGAGAGGAAGGGCC+AGG - chr2_1:40303568-40303587 None:intergenic 70.0%
AAAAGAGCGGCGAGCCGCGG+GGG - chr2_1:40305311-40305330 None:intergenic 70.0%
TGGCTGGGTGTGGGACAGGG+TGG - chr2_1:40306248-40306267 None:intergenic 70.0%
GGATCACAGCGCAGCCGTGG+TGG + chr2_1:40306850-40306869 Msa0207670:intron 70.0%
GAGAGGAAGGGCCAGGGCGC+AGG - chr2_1:40303561-40303580 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 40303429 40310074 40303429 ID=Msa0207670;Name=Msa0207670
chr2_1 mRNA 40303429 40310074 40303429 ID=Msa0207670-mRNA-1;Parent=Msa0207670;Name=Msa0207670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=488|1|1|1|1|1|7|336|352
chr2_1 exon 40303429 40304034 40303429 ID=Msa0207670-mRNA-1:exon:12467;Parent=Msa0207670-mRNA-1
chr2_1 exon 40304259 40304394 40304259 ID=Msa0207670-mRNA-1:exon:12468;Parent=Msa0207670-mRNA-1
chr2_1 exon 40307607 40307688 40307607 ID=Msa0207670-mRNA-1:exon:12469;Parent=Msa0207670-mRNA-1
chr2_1 exon 40308282 40308457 40308282 ID=Msa0207670-mRNA-1:exon:12470;Parent=Msa0207670-mRNA-1
chr2_1 exon 40308603 40308740 40308603 ID=Msa0207670-mRNA-1:exon:12471;Parent=Msa0207670-mRNA-1
chr2_1 exon 40308825 40308964 40308825 ID=Msa0207670-mRNA-1:exon:12472;Parent=Msa0207670-mRNA-1
chr2_1 exon 40309470 40310074 40309470 ID=Msa0207670-mRNA-1:exon:12473;Parent=Msa0207670-mRNA-1
chr2_1 five_prime_UTR 40303429 40303916 40303429 ID=Msa0207670-mRNA-1:five_prime_utr;Parent=Msa0207670-mRNA-1
chr2_1 CDS 40303917 40304034 40303917 ID=Msa0207670-mRNA-1:cds;Parent=Msa0207670-mRNA-1
chr2_1 CDS 40304259 40304394 40304259 ID=Msa0207670-mRNA-1:cds;Parent=Msa0207670-mRNA-1
chr2_1 CDS 40307607 40307688 40307607 ID=Msa0207670-mRNA-1:cds;Parent=Msa0207670-mRNA-1
chr2_1 CDS 40308282 40308457 40308282 ID=Msa0207670-mRNA-1:cds;Parent=Msa0207670-mRNA-1
chr2_1 CDS 40308603 40308740 40308603 ID=Msa0207670-mRNA-1:cds;Parent=Msa0207670-mRNA-1
chr2_1 CDS 40308825 40308964 40308825 ID=Msa0207670-mRNA-1:cds;Parent=Msa0207670-mRNA-1
chr2_1 CDS 40309470 40309738 40309470 ID=Msa0207670-mRNA-1:cds;Parent=Msa0207670-mRNA-1
chr2_1 three_prime_UTR 40309739 40310074 40309739 ID=Msa0207670-mRNA-1:three_prime_utr;Parent=Msa0207670-mRNA-1
Gene Sequence

>Msa0207670

ATGGAAAAGAAAAAAGTTACTGTACCTCTTGTTTGTCACGGTCACTCTCGTCCAGTTGTTGATCTCTTTTACAGTCCTGTTACTCCTGATGGTTTCTTTCTTATTAGCGCAAGCAAAGATGCTAGTCCTATGCTGAGGAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCATAAAGGTGCTGTTTGGAGTTGTTGTTTGGATGCTAATGCTTTGCGCGCTGCTACTGCTTCTGCTGATTTCTCAACCAAAGTTTGGGATGCATTAACAGGTGACGCGTTACATTCTTTTGAGCATAAGCACATTGTCAGAGCATGTGCTTTTTCTGAGGATACCCACCTTTTGCTCACTGGGGGAGCAGAGAAAATTCTCCGAATTTATGATTTGAATCGGCCTGATGCACCTCCTAAAGAAGTGGATAAATCCCCTGGTTCAGTCAGGAGTGTTGCATGGCTTCATAGTGACCAGACTATATTGAGTTCATGTACTGATATGGGAGGCGTCAGGCTATGGGATGTAAGAACTGGTAAAATTGTCCAGACACTTGACACCAAGTCGCCTATGACTAGTGCTGAAGTGAGTCAGGATGGTCGCTATATTACAACTGCTGATGGTTCTACTGTCAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGACATGCCTTGCAATGTGGAATCAGCTTCGTTAGAGCCCAAGTTTGGTAACAAGTTTGTTGCTGGGGGAGAAGACTTGTGGGTTCATGTTTTTGATTTCCATACGGGCGATGAGATTGCATGCAACAAAGGACATCATGGTCCTGTACACTGTGTCCGGTTCTCTCCTGGAGGAGAATCGTATGCATCAGGATCCGAGGATGGAACCATCAGAATATGGCAGACAGGGCCATTGACTCATGATGAATCAGAGGGTTTATCACCAAATGGAACCCTGGAAAAGGAGAAGGCAAATGCAGAGGAGGAGGTTTCGCGCAGGATTGAGGGTTTTCATATTGCAGAGGAGGCCAAGTCCAAAGGAAAGGAAGAGGCGGGGGTGGAATTATGA

Protein sequence

>Msa0207670

MEKKKVTVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDASPMLRNGETGDWIGTFEGHKGAVWSCCLDANALRAATASADFSTKVWDALTGDALHSFEHKHIVRACAFSEDTHLLLTGGAEKILRIYDLNRPDAPPKEVDKSPGSVRSVAWLHSDQTILSSCTDMGGVRLWDVRTGKIVQTLDTKSPMTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCNVESASLEPKFGNKFVAGGEDLWVHVFDFHTGDEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHDESEGLSPNGTLEKEKANAEEEVSRRIEGFHIAEEAKSKGKEEAGVEL*