Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356320 | XP_013459315.1 | 71.429 | 154 | 44 | 0 | 1 | 154 | 1 | 154 | 1.92e-74 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356320 | sp|Q39837|ALB1_SOYBN | 56.140 | 114 | 46 | 2 | 9 | 122 | 1 | 110 | 6.23e-38 | 128 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356320 | I3T793 | 71.429 | 154 | 44 | 0 | 1 | 154 | 1 | 154 | 9.16e-75 | 229 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011010 | Msa0356320 | 0.811964 | 5.379107e-51 | -8.615850e-47 |
| Msa0011040 | Msa0356320 | 0.808476 | 3.039361e-50 | -8.615850e-47 |
| Msa0012800 | Msa0356320 | 0.814528 | 1.471823e-51 | -8.615850e-47 |
| Msa0021870 | Msa0356320 | 0.803746 | 3.009134e-49 | -8.615850e-47 |
| Msa0024650 | Msa0356320 | 0.812472 | 4.167075e-51 | -8.615850e-47 |
| Msa0025570 | Msa0356320 | 0.813361 | 2.660643e-51 | -8.615850e-47 |
| Msa0031650 | Msa0356320 | 0.849406 | 3.301433e-60 | -8.615850e-47 |
| Msa0036230 | Msa0356320 | 0.817399 | 3.365229e-52 | -8.615850e-47 |
| Msa0036580 | Msa0356320 | 0.809669 | 1.687902e-50 | -8.615850e-47 |
| Msa0038010 | Msa0356320 | 0.809151 | 2.180116e-50 | -8.615850e-47 |
| Msa0048380 | Msa0356320 | 0.817164 | 3.800706e-52 | -8.615850e-47 |
| Msa0073110 | Msa0356320 | 0.818978 | 1.477917e-52 | -8.615850e-47 |
| Msa0074620 | Msa0356320 | 0.804210 | 2.409516e-49 | -8.615850e-47 |
| Msa0080010 | Msa0356320 | 0.801954 | 7.054378e-49 | -8.615850e-47 |
| Msa0080620 | Msa0356320 | -0.811211 | 7.840637e-51 | -8.615850e-47 |
| Msa0084160 | Msa0356320 | 0.838041 | 3.638926e-57 | -8.615850e-47 |
| Msa0085710 | Msa0356320 | 0.819831 | 9.448483e-53 | -8.615850e-47 |
| Msa0093530 | Msa0356320 | 0.878174 | 3.475262e-69 | -8.615850e-47 |
| Msa0098380 | Msa0356320 | 0.805862 | 1.087579e-49 | -8.615850e-47 |
| Msa0120450 | Msa0356320 | 0.816514 | 5.316990e-52 | -8.615850e-47 |
| Msa0121320 | Msa0356320 | 0.811054 | 8.481425e-51 | -8.615850e-47 |
| Msa0126960 | Msa0356320 | 0.879987 | 7.949985e-70 | -8.615850e-47 |
| Msa0129270 | Msa0356320 | 0.804072 | 2.574299e-49 | -8.615850e-47 |
| Msa0130710 | Msa0356320 | 0.801377 | 9.264614e-49 | -8.615850e-47 |
| Msa0139270 | Msa0356320 | 0.821944 | 3.083685e-53 | -8.615850e-47 |
| Msa0154750 | Msa0356320 | 0.810674 | 1.025181e-50 | -8.615850e-47 |
| Msa0160580 | Msa0356320 | 0.828442 | 8.970508e-55 | -8.615850e-47 |
| Msa0163690 | Msa0356320 | 0.834261 | 3.319493e-56 | -8.615850e-47 |
| Msa0171740 | Msa0356320 | 0.848355 | 6.462176e-60 | -8.615850e-47 |
| Msa0175060 | Msa0356320 | 0.814743 | 1.318685e-51 | -8.615850e-47 |
| Msa0176620 | Msa0356320 | 0.818716 | 1.695185e-52 | -8.615850e-47 |
| Msa0184390 | Msa0356320 | 0.805390 | 1.366360e-49 | -8.615850e-47 |
| Msa0186510 | Msa0356320 | -0.817599 | 3.033316e-52 | -8.615850e-47 |
| Msa0195190 | Msa0356320 | 0.821446 | 4.020169e-53 | -8.615850e-47 |
| Msa0196280 | Msa0356320 | 0.800867 | 1.178394e-48 | -8.615850e-47 |
| Msa0218060 | Msa0356320 | 0.847365 | 1.210915e-59 | -8.615850e-47 |
| Msa0225910 | Msa0356320 | 0.806426 | 8.272392e-50 | -8.615850e-47 |
| Msa0225920 | Msa0356320 | 0.812260 | 4.636463e-51 | -8.615850e-47 |
| Msa0234130 | Msa0356320 | 0.817466 | 3.249245e-52 | -8.615850e-47 |
| Msa0240580 | Msa0356320 | 0.814788 | 1.288775e-51 | -8.615850e-47 |
| Msa0243970 | Msa0356320 | 0.854030 | 1.614906e-61 | -8.615850e-47 |
| Msa0243990 | Msa0356320 | 0.844086 | 9.401190e-59 | -8.615850e-47 |
| Msa0244310 | Msa0356320 | 0.818593 | 1.808009e-52 | -8.615850e-47 |
| Msa0245660 | Msa0356320 | 0.831672 | 1.461731e-55 | -8.615850e-47 |
| Msa0258010 | Msa0356320 | 0.844522 | 7.175534e-59 | -8.615850e-47 |
| Msa0266640 | Msa0356320 | 0.829404 | 5.245664e-55 | -8.615850e-47 |
| Msa0266650 | Msa0356320 | 0.806687 | 7.288318e-50 | -8.615850e-47 |
| Msa0267710 | Msa0356320 | 0.814624 | 1.401682e-51 | -8.615850e-47 |
| Msa0269710 | Msa0356320 | 0.804640 | 1.960403e-49 | -8.615850e-47 |
| Msa0275570 | Msa0356320 | 0.819484 | 1.133768e-52 | -8.615850e-47 |
| Msa0278940 | Msa0356320 | 0.830806 | 2.386806e-55 | -8.615850e-47 |
| Msa0278960 | Msa0356320 | 0.819184 | 1.326977e-52 | -8.615850e-47 |
| Msa0311540 | Msa0356320 | 0.829433 | 5.161559e-55 | -8.615850e-47 |
| Msa0318360 | Msa0356320 | 0.809250 | 2.076321e-50 | -8.615850e-47 |
| Msa0318370 | Msa0356320 | 0.805327 | 1.408469e-49 | -8.615850e-47 |
| Msa0322460 | Msa0356320 | 0.805922 | 1.056599e-49 | -8.615850e-47 |
| Msa0335340 | Msa0356320 | 0.846360 | 2.280465e-59 | -8.615850e-47 |
| Msa0336640 | Msa0356320 | 0.834816 | 2.408467e-56 | -8.615850e-47 |
| Msa0356180 | Msa0356320 | 0.870572 | 1.318979e-66 | -8.615850e-47 |
| Msa0356200 | Msa0356320 | 0.902850 | 6.358167e-79 | -8.615850e-47 |
| Msa0356240 | Msa0356320 | 0.875706 | 2.494973e-68 | -8.615850e-47 |
| Msa0356250 | Msa0356320 | 0.901233 | 3.295197e-78 | -8.615850e-47 |
| Msa0356270 | Msa0356320 | 0.897882 | 9.130409e-77 | -8.615850e-47 |
| Msa0356320 | Msa0356360 | 0.854444 | 1.225959e-61 | -8.615850e-47 |
| Msa0356320 | Msa0356380 | 0.899813 | 1.366149e-77 | -8.615850e-47 |
| Msa0356320 | Msa0356410 | 0.903249 | 4.214733e-79 | -8.615850e-47 |
| Msa0356320 | Msa0366510 | 0.804452 | 2.146004e-49 | -8.615850e-47 |
| Msa0356320 | Msa0385770 | -0.805273 | 1.445477e-49 | -8.615850e-47 |
| Msa0356320 | Msa0396700 | 0.809468 | 1.864201e-50 | -8.615850e-47 |
| Msa0356320 | Msa0396790 | 0.822857 | 1.892982e-53 | -8.615850e-47 |
| Msa0356320 | Msa0401420 | 0.804820 | 1.797555e-49 | -8.615850e-47 |
| Msa0356320 | Msa0414480 | 0.821305 | 4.334056e-53 | -8.615850e-47 |
| Msa0356320 | Msa0424240 | 0.816363 | 5.749081e-52 | -8.615850e-47 |
| Msa0356320 | Msa0430040 | -0.805774 | 1.134582e-49 | -8.615850e-47 |
| Msa0356320 | Msa0444400 | 0.839212 | 1.814168e-57 | -8.615850e-47 |
| Msa0356320 | Msa0449290 | 0.875584 | 2.746224e-68 | -8.615850e-47 |
| Msa0356320 | Msa0449360 | 0.890880 | 6.600073e-74 | -8.615850e-47 |
| Msa0356320 | Msa0449380 | 0.878055 | 3.826269e-69 | -8.615850e-47 |
| Msa0356320 | Msa0449940 | 0.840455 | 8.607063e-58 | -8.615850e-47 |
| Msa0356320 | Msa0464300 | 0.816008 | 6.901700e-52 | -8.615850e-47 |
| Msa0356320 | Msa0464310 | 0.811757 | 5.968743e-51 | -8.615850e-47 |
| Msa0356320 | Msa0478400 | 0.815675 | 8.188668e-52 | -8.615850e-47 |
| Msa0356320 | Msa0481050 | -0.800438 | 1.441308e-48 | -8.615850e-47 |
| Msa0356320 | Msa0487100 | 0.847016 | 1.509622e-59 | -8.615850e-47 |
| Msa0356320 | Msa0487110 | 0.832916 | 7.195572e-56 | -8.615850e-47 |
| Msa0356320 | Msa0491800 | 0.811958 | 5.394311e-51 | -8.615850e-47 |
| Msa0356320 | Msa0491950 | 0.809959 | 1.462367e-50 | -8.615850e-47 |
| Msa0356320 | Msa0493710 | 0.829213 | 5.838850e-55 | -8.615850e-47 |
| Msa0356320 | Msa0531040 | 0.839955 | 1.162169e-57 | -8.615850e-47 |
| Msa0356320 | Msa0531080 | 0.800044 | 1.733733e-48 | -8.615850e-47 |
| Msa0356320 | Msa0532670 | 0.802878 | 4.550997e-49 | -8.615850e-47 |
| Msa0356320 | Msa0532680 | 0.801970 | 7.002727e-49 | -8.615850e-47 |
| Msa0356320 | Msa0533510 | 0.833208 | 6.084791e-56 | -8.615850e-47 |
| Msa0356320 | Msa0533520 | 0.811353 | 7.303819e-51 | -8.615850e-47 |
| Msa0356320 | Msa0535570 | 0.810277 | 1.248798e-50 | -8.615850e-47 |
| Msa0356320 | Msa0538440 | 0.828226 | 1.011366e-54 | -8.615850e-47 |
| Msa0356320 | Msa0538530 | 0.818485 | 1.912303e-52 | -8.615850e-47 |
| Msa0356320 | Msa0539260 | 0.801185 | 1.014271e-48 | -8.615850e-47 |
| Msa0356320 | Msa0540640 | 0.827189 | 1.795055e-54 | -8.615850e-47 |
| Msa0356320 | Msa0543740 | 0.817120 | 3.887790e-52 | -8.615850e-47 |
| Msa0356320 | Msa0545680 | 0.804856 | 1.767057e-49 | -8.615850e-47 |
| Msa0356320 | Msa0546760 | 0.810071 | 1.383285e-50 | -8.615850e-47 |
| Msa0356320 | Msa0548760 | 0.807713 | 4.417855e-50 | -8.615850e-47 |
| Msa0356320 | Msa0549170 | 0.813198 | 2.889429e-51 | -8.615850e-47 |
| Msa0356320 | Msa0549970 | 0.827882 | 1.224013e-54 | -8.615850e-47 |
| Msa0356320 | Msa0550800 | -0.804877 | 1.749323e-49 | -8.615850e-47 |
| Msa0356320 | Msa0554660 | 0.824107 | 9.657142e-54 | -8.615850e-47 |
| Msa0356320 | Msa0561830 | 0.801599 | 8.346338e-49 | -8.615850e-47 |
| Msa0356320 | Msa0567570 | 0.801348 | 9.394282e-49 | -8.615850e-47 |
| Msa0356320 | Msa0587920 | 0.802200 | 6.279488e-49 | -8.615850e-47 |
| Msa0356320 | Msa0587930 | 0.816116 | 6.527491e-52 | -8.615850e-47 |
| Msa0356320 | Msa0589450 | 0.801039 | 1.086525e-48 | -8.615850e-47 |
| Msa0356320 | Msa0589460 | 0.807712 | 4.421825e-50 | -8.615850e-47 |
| Msa0356320 | Msa0589720 | 0.855593 | 5.687114e-62 | -8.615850e-47 |
| Msa0356320 | Msa0589730 | 0.813400 | 2.609779e-51 | -8.615850e-47 |
| Msa0356320 | Msa0589740 | 0.825100 | 5.634698e-54 | -8.615850e-47 |
| Msa0356320 | Msa0589750 | 0.821605 | 3.693419e-53 | -8.615850e-47 |
| Msa0356320 | Msa0591490 | 0.801065 | 1.073183e-48 | -8.615850e-47 |
| Msa0356320 | Msa0594330 | 0.837398 | 5.322471e-57 | -8.615850e-47 |
| Msa0356320 | Msa0597800 | 0.813847 | 2.080734e-51 | -8.615850e-47 |
| Msa0356320 | Msa0597820 | 0.821025 | 5.027445e-53 | -8.615850e-47 |
| Msa0356320 | Msa0601400 | 0.811599 | 6.460550e-51 | -8.615850e-47 |
| Msa0356320 | Msa0602100 | 0.803264 | 3.787270e-49 | -8.615850e-47 |
| Msa0356320 | Msa0604280 | 0.834951 | 2.226810e-56 | -8.615850e-47 |
| Msa0356320 | Msa0605480 | 0.828788 | 7.399351e-55 | -8.615850e-47 |
| Msa0356320 | Msa0622890 | 0.800803 | 1.214131e-48 | -8.615850e-47 |
| Msa0356320 | Msa0623750 | 0.826217 | 3.062991e-54 | -8.615850e-47 |
| Msa0356320 | Msa0624260 | -0.801610 | 8.300311e-49 | -8.615850e-47 |
| Msa0356320 | Msa0628200 | 0.803058 | 4.178381e-49 | -8.615850e-47 |
| Msa0356320 | Msa0630130 | 0.805094 | 1.575638e-49 | -8.615850e-47 |
| Msa0356320 | Msa0634290 | 0.826339 | 2.864008e-54 | -8.615850e-47 |
| Msa0356320 | Msa0639400 | 0.806623 | 7.518611e-50 | -8.615850e-47 |
| Msa0356320 | Msa0640290 | 0.823970 | 1.039428e-53 | -8.615850e-47 |
| Msa0356320 | Msa0645120 | 0.807404 | 5.139209e-50 | -8.615850e-47 |
| Msa0356320 | Msa0645370 | 0.801437 | 9.009486e-49 | -8.615850e-47 |
| Msa0356320 | Msa0646440 | 0.819702 | 1.011157e-52 | -8.615850e-47 |
| Msa0356320 | Msa0655370 | 0.803542 | 3.316742e-49 | -8.615850e-47 |
| Msa0356320 | Msa0659230 | 0.821734 | 3.448962e-53 | -8.615850e-47 |
| Msa0356320 | Msa0668210 | 0.829770 | 4.274524e-55 | -8.615850e-47 |
| Msa0356320 | Msa0668220 | 0.816267 | 6.039153e-52 | -8.615850e-47 |
| Msa0356320 | Msa0670360 | 0.801261 | 9.785366e-49 | -8.615850e-47 |
| Msa0356320 | Msa0677110 | -0.806477 | 8.072733e-50 | -8.615850e-47 |
| Msa0356320 | Msa0680460 | 0.806207 | 9.202284e-50 | -8.615850e-47 |
| Msa0356320 | Msa0682420 | 0.809099 | 2.237126e-50 | -8.615850e-47 |
| Msa0356320 | Msa0685080 | 0.814404 | 1.567262e-51 | -8.615850e-47 |
| Msa0356320 | Msa0715260 | 0.820657 | 6.108759e-53 | -8.615850e-47 |
| Msa0356320 | Msa0716600 | 0.830962 | 2.185168e-55 | -8.615850e-47 |
| Msa0356320 | Msa0716980 | 0.821109 | 4.809088e-53 | -8.615850e-47 |
| Msa0356320 | Msa0718770 | 0.821312 | 4.317454e-53 | -8.615850e-47 |
| Msa0356320 | Msa0728520 | 0.815344 | 9.702487e-52 | -8.615850e-47 |
| Msa0356320 | Msa0730890 | 0.831315 | 1.789789e-55 | -8.615850e-47 |
| Msa0356320 | Msa0735340 | 0.801613 | 8.291079e-49 | -8.615850e-47 |
| Msa0356320 | Msa0756570 | 0.809014 | 2.332615e-50 | -8.615850e-47 |
| Msa0356320 | Msa0757120 | 0.804526 | 2.070952e-49 | -8.615850e-47 |
| Msa0356320 | Msa0757240 | 0.819141 | 1.357231e-52 | -8.615850e-47 |
| Msa0356320 | Msa0758150 | 0.875788 | 2.338327e-68 | -8.615850e-47 |
| Msa0356320 | Msa0776540 | 0.814183 | 1.754274e-51 | -8.615850e-47 |
| Msa0356320 | Msa0776590 | -0.805689 | 1.182217e-49 | -8.615850e-47 |
| Msa0356320 | Msa0783580 | 0.802994 | 4.307738e-49 | -8.615850e-47 |
| Msa0356320 | Msa0787860 | 0.815063 | 1.120049e-51 | -8.615850e-47 |
| Msa0356320 | Msa0798230 | 0.808971 | 2.382113e-50 | -8.615850e-47 |
| Msa0356320 | Msa0813840 | 0.805666 | 1.195798e-49 | -8.615850e-47 |
| Msa0356320 | Msa0816140 | 0.830220 | 3.320539e-55 | -8.615850e-47 |
| Msa0356320 | Msa0817100 | 0.879539 | 1.147390e-69 | -8.615850e-47 |
| Msa0356320 | Msa0824850 | 0.832030 | 1.192487e-55 | -8.615850e-47 |
| Msa0356320 | Msa0824860 | 0.814737 | 1.323149e-51 | -8.615850e-47 |
| Msa0356320 | Msa0827800 | 0.822078 | 2.871605e-53 | -8.615850e-47 |
| Msa0356320 | Msa0836740 | 0.819859 | 9.310200e-53 | -8.615850e-47 |
| Msa0356320 | Msa0853080 | 0.803228 | 3.852307e-49 | -8.615850e-47 |
| Msa0356320 | Msa0854380 | 0.828001 | 1.145960e-54 | -8.615850e-47 |
| Msa0356320 | Msa0855260 | 0.818776 | 1.642508e-52 | -8.615850e-47 |
| Msa0356320 | Msa0863840 | 0.819700 | 1.012024e-52 | -8.615850e-47 |
| Msa0356320 | Msa0863850 | 0.800208 | 1.605547e-48 | -8.615850e-47 |
| Msa0356320 | Msa0863860 | 0.812792 | 3.546952e-51 | -8.615850e-47 |
| Msa0356320 | Msa0864160 | 0.827410 | 1.589085e-54 | -8.615850e-47 |
| Msa0356320 | Msa0886370 | 0.846162 | 2.582824e-59 | -8.615850e-47 |
| Msa0356320 | Msa0890210 | 0.813604 | 2.353301e-51 | -8.615850e-47 |
| Msa0356320 | Msa0896920 | 0.856408 | 3.283612e-62 | -8.615850e-47 |
| Msa0356320 | Msa0896950 | 0.836553 | 8.746154e-57 | -8.615850e-47 |
| Msa0356320 | Msa0902340 | 0.801889 | 7.274703e-49 | -8.615850e-47 |
| Msa0356320 | Msa0910590 | 0.813297 | 2.748801e-51 | -8.615850e-47 |
| Msa0356320 | Msa0913500 | 0.832291 | 1.028140e-55 | -8.615850e-47 |
| Msa0356320 | Msa0932910 | 0.809128 | 2.204726e-50 | -8.615850e-47 |
| Msa0356320 | Msa0932930 | 0.839494 | 1.532174e-57 | -8.615850e-47 |
| Msa0356320 | Msa0948430 | 0.804173 | 2.452807e-49 | -8.615850e-47 |
| Msa0356320 | Msa0951060 | 0.828138 | 1.062242e-54 | -8.615850e-47 |
| Msa0356320 | Msa0962290 | 0.816168 | 6.354830e-52 | -8.615850e-47 |
| Msa0356320 | Msa0964510 | 0.809549 | 1.791353e-50 | -8.615850e-47 |
| Msa0356320 | Msa0970790 | 0.810356 | 1.200476e-50 | -8.615850e-47 |
| Msa0356320 | Msa0987550 | 0.839183 | 1.845256e-57 | -8.615850e-47 |
| Msa0356320 | Msa0996980 | 0.809822 | 1.564421e-50 | -8.615850e-47 |
| Msa0356320 | Msa1005370 | 0.801493 | 8.772943e-49 | -8.615850e-47 |
| Msa0356320 | Msa1006030 | 0.805592 | 1.239445e-49 | -8.615850e-47 |
| Msa0356320 | Msa1007930 | 0.812054 | 5.142748e-51 | -8.615850e-47 |
| Msa0356320 | Msa1024420 | 0.812895 | 3.366933e-51 | -8.615850e-47 |
| Msa0356320 | Msa1024480 | 0.855497 | 6.064011e-62 | -8.615850e-47 |
| Msa0356320 | Msa1036020 | 0.839211 | 1.815058e-57 | -8.615850e-47 |
| Msa0356320 | Msa1040330 | 0.814321 | 1.634835e-51 | -8.615850e-47 |
| Msa0356320 | Msa1041910 | 0.814059 | 1.868615e-51 | -8.615850e-47 |
| Msa0356320 | Msa1046220 | 0.809120 | 2.213835e-50 | -8.615850e-47 |
| Msa0356320 | Msa1047300 | 0.802193 | 6.301759e-49 | -8.615850e-47 |
| Msa0356320 | Msa1047340 | 0.802585 | 5.232376e-49 | -8.615850e-47 |
| Msa0356320 | Msa1049400 | 0.820171 | 7.896858e-53 | -8.615850e-47 |
| Msa0356320 | Msa1057340 | -0.800170 | 1.634099e-48 | -8.615850e-47 |
| Msa0356320 | Msa1061670 | 0.817605 | 3.024018e-52 | -8.615850e-47 |
| Msa0356320 | Msa1061760 | 0.801738 | 7.815804e-49 | -8.615850e-47 |
| Msa0356320 | Msa1064940 | 0.833982 | 3.899825e-56 | -8.615850e-47 |
| Msa0356320 | Msa1069440 | -0.809955 | 1.465248e-50 | -8.615850e-47 |
| Msa0356320 | Msa1075030 | 0.808351 | 3.231507e-50 | -8.615850e-47 |
| Msa0356320 | Msa1076280 | 0.837042 | 6.565403e-57 | -8.615850e-47 |
| Msa0356320 | Msa1083100 | 0.828097 | 1.086364e-54 | -8.615850e-47 |
| Msa0356320 | Msa1099640 | 0.843883 | 1.065220e-58 | -8.615850e-47 |
| Msa0356320 | Msa1100330 | 0.809187 | 2.141336e-50 | -8.615850e-47 |
| Msa0356320 | Msa1103450 | 0.823309 | 1.484719e-53 | -8.615850e-47 |
| Msa0356320 | Msa1106960 | 0.811614 | 6.410418e-51 | -8.615850e-47 |
| Msa0356320 | Msa1107520 | 0.812833 | 3.474222e-51 | -8.615850e-47 |
| Msa0356320 | Msa1109540 | 0.838601 | 2.610829e-57 | -8.615850e-47 |
| Msa0356320 | Msa1115900 | 0.816221 | 6.183700e-52 | -8.615850e-47 |
| Msa0356320 | Msa1120960 | 0.802984 | 4.328492e-49 | -8.615850e-47 |
| Msa0356320 | Msa1122550 | 0.800259 | 1.567472e-48 | -8.615850e-47 |
| Msa0356320 | Msa1127940 | 0.814789 | 1.288539e-51 | -8.615850e-47 |
| Msa0356320 | Msa1131300 | -0.800041 | 1.736222e-48 | -8.615850e-47 |
| Msa0356320 | Msa1136060 | 0.802630 | 5.120657e-49 | -8.615850e-47 |
| Msa0356320 | Msa1138110 | 0.816500 | 5.355138e-52 | -8.615850e-47 |
| Msa0356320 | Msa1147010 | 0.803651 | 3.148245e-49 | -8.615850e-47 |
| Msa0356320 | Msa1150860 | 0.805238 | 1.470286e-49 | -8.615850e-47 |
| Msa0356320 | Msa1152330 | 0.802375 | 5.781229e-49 | -8.615850e-47 |
| Msa0356320 | Msa1160540 | 0.825981 | 3.484645e-54 | -8.615850e-47 |
| Msa0356320 | Msa1162370 | 0.805471 | 1.313609e-49 | -8.615850e-47 |
| Msa0356320 | Msa1165860 | 0.818959 | 1.493274e-52 | -8.615850e-47 |
| Msa0356320 | Msa1167960 | 0.815435 | 9.260474e-52 | -8.615850e-47 |
| Msa0356320 | Msa1170340 | 0.803256 | 3.801683e-49 | -8.615850e-47 |
| Msa0356320 | Msa1179190 | 0.830743 | 2.472358e-55 | -8.615850e-47 |
| Msa0356320 | Msa1187750 | 0.801780 | 7.662787e-49 | -8.615850e-47 |
| Msa0356320 | Msa1190090 | 0.815593 | 8.537089e-52 | -8.615850e-47 |
| Msa0356320 | Msa1190300 | -0.809555 | 1.786046e-50 | -8.615850e-47 |
| Msa0356320 | Msa1191270 | 0.827601 | 1.429459e-54 | -8.615850e-47 |
| Msa0356320 | Msa1206330 | 0.833261 | 5.903787e-56 | -8.615850e-47 |
| Msa0356320 | Msa1206380 | 0.838625 | 2.573112e-57 | -8.615850e-47 |
| Msa0356320 | Msa1211160 | 0.823392 | 1.419545e-53 | -8.615850e-47 |
| Msa0356320 | Msa1211320 | 0.820704 | 5.959952e-53 | -8.615850e-47 |
| Msa0356320 | Msa1219780 | 0.809150 | 2.181519e-50 | -8.615850e-47 |
| Msa0356320 | Msa1220720 | 0.811485 | 6.838201e-51 | -8.615850e-47 |
| Msa0356320 | Msa1221170 | 0.800415 | 1.457117e-48 | -8.615850e-47 |
| Msa0356320 | Msa1223710 | 0.832627 | 8.487177e-56 | -8.615850e-47 |
| Msa0356320 | Msa1223990 | 0.816717 | 4.789218e-52 | -8.615850e-47 |
| Msa0356320 | Msa1233620 | 0.838063 | 3.592255e-57 | -8.615850e-47 |
| Msa0356320 | Msa1255710 | 0.814239 | 1.704840e-51 | -8.615850e-47 |
| Msa0356320 | Msa1258020 | 0.812592 | 3.922420e-51 | -8.615850e-47 |
| Msa0356320 | Msa1259570 | 0.822286 | 2.568673e-53 | -8.615850e-47 |
| Msa0356320 | Msa1263120 | 0.815893 | 7.319995e-52 | -8.615850e-47 |
| Msa0356320 | Msa1263370 | 0.841339 | 5.045743e-58 | -8.615850e-47 |
| Msa0356320 | Msa1265570 | 0.810424 | 1.160883e-50 | -8.615850e-47 |
| Msa0356320 | Msa1273320 | 0.820203 | 7.766367e-53 | -8.615850e-47 |
| Msa0356320 | Msa1275840 | 0.844830 | 5.929154e-59 | -8.615850e-47 |
| Msa0356320 | Msa1296490 | 0.804542 | 2.055196e-49 | -8.615850e-47 |
| Msa0356320 | Msa1299310 | 0.816595 | 5.099893e-52 | -8.615850e-47 |
| Msa0356320 | Msa1302630 | 0.822255 | 2.612316e-53 | -8.615850e-47 |
| Msa0356320 | Msa1314020 | 0.847948 | 8.371151e-60 | -8.615850e-47 |
| Msa0356320 | Msa1329770 | 0.807089 | 5.992190e-50 | -8.615850e-47 |
| Msa0356320 | Msa1334670 | 0.807444 | 5.038625e-50 | -8.615850e-47 |
| Msa0356320 | Msa1335500 | 0.804077 | 2.568046e-49 | -8.615850e-47 |
| Msa0356320 | Msa1339490 | 0.856934 | 2.298873e-62 | -8.615850e-47 |
| Msa0356320 | Msa1350490 | 0.815693 | 8.113274e-52 | -8.615850e-47 |
| Msa0356320 | Msa1355330 | 0.806478 | 8.069417e-50 | -8.615850e-47 |
| Msa0356320 | Msa1357840 | 0.810561 | 1.084013e-50 | -8.615850e-47 |
| Msa0356320 | Msa1362520 | 0.843098 | 1.726332e-58 | -8.615850e-47 |
| Msa0356320 | Msa1362590 | 0.810722 | 1.000964e-50 | -8.615850e-47 |
| Msa0356320 | Msa1363690 | 0.813861 | 2.066141e-51 | -8.615850e-47 |
| Msa0356320 | Msa1365230 | 0.812504 | 4.101198e-51 | -8.615850e-47 |
| Msa0356320 | Msa1377190 | 0.828657 | 7.957444e-55 | -8.615850e-47 |
| Msa0356320 | Msa1378950 | 0.884728 | 1.495945e-71 | -8.615850e-47 |
| Msa0356320 | Msa1380740 | 0.818664 | 1.742134e-52 | -8.615850e-47 |
| Msa0356320 | Msa1393440 | 0.805840 | 1.099326e-49 | -8.615850e-47 |
| Msa0356320 | Msa1395690 | 0.815601 | 8.503812e-52 | -8.615850e-47 |
| Msa0356320 | Msa1396550 | 0.808986 | 2.364981e-50 | -8.615850e-47 |
| Msa0356320 | Msa1401650 | 0.809510 | 1.825717e-50 | -8.615850e-47 |
| Msa0356320 | Msa1409600 | 0.815885 | 7.349902e-52 | -8.615850e-47 |
| Msa0356320 | Msa1411550 | 0.833783 | 4.373947e-56 | -8.615850e-47 |
| Msa0356320 | Msa1417220 | 0.841260 | 5.291883e-58 | -8.615850e-47 |
| Msa0356320 | Msa1441300 | 0.828194 | 1.029439e-54 | -8.615850e-47 |
| Msa0356320 | Msa1445780 | 0.814329 | 1.628511e-51 | -8.615850e-47 |
| Msa0356320 | Msa1451690 | -0.806551 | 7.785269e-50 | -8.615850e-47 |
| Msa0356320 | Msa1452920 | 0.835512 | 1.607252e-56 | -8.615850e-47 |
| Msa0356320 | Msa1453650 | 0.810089 | 1.370608e-50 | -8.615850e-47 |
| Msa0356320 | Msa1459610 | 0.805028 | 1.626525e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356320 | MtrunA17_Chr3g0090571 | 71.429 | 154 | 44 | 0 | 1 | 154 | 1 | 154 | 1.76e-78 | 229 |
| Msa0356320 | MtrunA17_Chr7g0232011 | 52.903 | 155 | 62 | 6 | 1 | 154 | 1 | 145 | 9.41e-46 | 146 |
| Msa0356320 | MtrunA17_Chr7g0231991 | 53.600 | 125 | 55 | 2 | 33 | 154 | 8 | 132 | 4.83e-44 | 141 |
| Msa0356320 | MtrunA17_Chr6g0456951 | 47.887 | 142 | 67 | 5 | 1 | 140 | 1 | 137 | 1.55e-38 | 127 |
| Msa0356320 | MtrunA17_Chr3g0111281 | 43.791 | 153 | 68 | 5 | 1 | 150 | 1 | 138 | 1.72e-33 | 115 |
| Msa0356320 | MtrunA17_Chr8g0344771 | 49.550 | 111 | 53 | 3 | 36 | 145 | 11 | 119 | 2.74e-33 | 114 |
| Msa0356320 | MtrunA17_Chr8g0344791 | 54.455 | 101 | 43 | 3 | 37 | 136 | 12 | 110 | 1.23e-32 | 112 |
| Msa0356320 | MtrunA17_Chr7g0236791 | 45.652 | 138 | 69 | 4 | 1 | 136 | 1 | 134 | 1.32e-32 | 112 |
| Msa0356320 | MtrunA17_Chr3g0111111 | 43.836 | 146 | 64 | 7 | 1 | 137 | 1 | 137 | 2.66e-32 | 112 |
| Msa0356320 | MtrunA17_Chr7g0236801 | 45.714 | 140 | 67 | 6 | 1 | 136 | 1 | 135 | 9.63e-32 | 110 |
| Msa0356320 | MtrunA17_Chr3g0111131 | 45.324 | 139 | 61 | 4 | 1 | 134 | 1 | 129 | 3.78e-31 | 108 |
| Msa0356320 | MtrunA17_Chr3g0111351 | 42.857 | 140 | 70 | 5 | 1 | 137 | 9 | 141 | 4.65e-31 | 108 |
| Msa0356320 | MtrunA17_Chr8g0344801 | 54.639 | 97 | 40 | 4 | 42 | 136 | 1 | 95 | 3.62e-30 | 105 |
| Msa0356320 | MtrunA17_Chr3g0111261 | 46.795 | 156 | 55 | 8 | 1 | 150 | 1 | 134 | 4.05e-30 | 106 |
| Msa0356320 | MtrunA17_Chr3g0111071 | 42.336 | 137 | 71 | 4 | 1 | 136 | 1 | 130 | 1.32e-28 | 102 |
| Msa0356320 | MtrunA17_Chr6g0464071 | 45.255 | 137 | 67 | 5 | 1 | 136 | 1 | 130 | 2.39e-28 | 101 |
| Msa0356320 | MtrunA17_Chr3g0111241 | 41.259 | 143 | 68 | 5 | 1 | 140 | 1 | 130 | 2.66e-28 | 101 |
| Msa0356320 | MtrunA17_Chr6g0456991 | 55.435 | 92 | 38 | 3 | 37 | 127 | 16 | 105 | 4.91e-28 | 100 |
| Msa0356320 | MtrunA17_Chr8g0357331 | 54.321 | 81 | 37 | 0 | 74 | 154 | 21 | 101 | 3.23e-27 | 97.8 |
| Msa0356320 | MtrunA17_Chr3g0111081 | 43.056 | 144 | 60 | 6 | 1 | 136 | 1 | 130 | 3.41e-27 | 99.0 |
| Msa0356320 | MtrunA17_Chr3g0104571 | 43.478 | 138 | 68 | 7 | 1 | 135 | 1 | 131 | 8.20e-27 | 97.8 |
| Msa0356320 | MtrunA17_Chr3g0111191 | 41.129 | 124 | 60 | 4 | 1 | 118 | 1 | 117 | 1.88e-26 | 96.3 |
| Msa0356320 | MtrunA17_Chr6g0468621 | 40.972 | 144 | 63 | 6 | 1 | 136 | 1 | 130 | 2.04e-26 | 97.1 |
| Msa0356320 | MtrunA17_Chr6g0468601 | 37.838 | 148 | 65 | 4 | 1 | 136 | 1 | 133 | 2.52e-25 | 94.4 |
| Msa0356320 | MtrunA17_Chr3g0111221 | 56.923 | 65 | 27 | 1 | 73 | 136 | 46 | 110 | 4.99e-21 | 82.4 |
| Msa0356320 | MtrunA17_Chr4g0012121 | 39.873 | 158 | 78 | 5 | 1 | 154 | 1 | 145 | 3.24e-20 | 81.3 |
| Msa0356320 | MtrunA17_Chr1g0153591 | 39.516 | 124 | 58 | 5 | 1 | 124 | 1 | 107 | 3.51e-20 | 80.1 |
| Msa0356320 | MtrunA17_Chr3g0111311 | 51.136 | 88 | 33 | 5 | 35 | 119 | 10 | 90 | 3.59e-20 | 79.7 |
| Msa0356320 | MtrunA17_Chr3g0092701 | 68.519 | 54 | 17 | 0 | 1 | 54 | 1 | 54 | 8.91e-20 | 77.8 |
| Msa0356320 | MtrunA17_Chr7g0225821 | 36.220 | 127 | 73 | 5 | 1 | 125 | 1 | 121 | 9.39e-19 | 77.0 |
| Msa0356320 | MtrunA17_Chr3g0092851 | 65.455 | 55 | 18 | 1 | 1 | 54 | 1 | 55 | 3.61e-18 | 73.9 |
| Msa0356320 | MtrunA17_Chr8g0359071 | 34.286 | 140 | 68 | 5 | 3 | 132 | 4 | 129 | 8.10e-18 | 74.7 |
| Msa0356320 | MtrunA17_Chr3g0092841 | 59.420 | 69 | 27 | 1 | 1 | 68 | 1 | 69 | 1.00e-17 | 72.8 |
| Msa0356320 | MtrunA17_Chr3g0092801 | 59.420 | 69 | 27 | 1 | 1 | 68 | 1 | 69 | 1.00e-17 | 72.8 |
| Msa0356320 | MtrunA17_Chr3g0092881 | 56.522 | 69 | 29 | 1 | 1 | 68 | 1 | 69 | 1.80e-17 | 72.0 |
| Msa0356320 | MtrunA17_Chr3g0111711 | 39.344 | 122 | 56 | 5 | 1 | 117 | 1 | 109 | 2.29e-16 | 70.5 |
| Msa0356320 | MtrunA17_Chr3g0092704 | 82.500 | 40 | 7 | 0 | 1 | 40 | 1 | 40 | 2.77e-16 | 69.3 |
| Msa0356320 | MtrunA17_Chr3g0111201 | 49.206 | 63 | 21 | 1 | 88 | 150 | 3 | 54 | 1.03e-14 | 64.7 |
| Msa0356320 | MtrunA17_Chr3g0092771 | 87.879 | 33 | 4 | 0 | 1 | 33 | 1 | 33 | 2.10e-13 | 61.2 |
| Msa0356320 | MtrunA17_Chr3g0092901 | 56.140 | 57 | 24 | 1 | 1 | 57 | 1 | 56 | 3.38e-13 | 60.8 |
| Msa0356320 | MtrunA17_Chr3g0090581 | 57.143 | 49 | 21 | 0 | 21 | 69 | 22 | 70 | 1.43e-12 | 59.7 |
| Msa0356320 | MtrunA17_Chr3g0092941 | 75.676 | 37 | 8 | 1 | 1 | 36 | 1 | 37 | 3.57e-11 | 55.5 |
| Msa0356320 | MtrunA17_Chr6g0483481 | 62.500 | 40 | 15 | 0 | 91 | 130 | 73 | 112 | 9.29e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAATGCTGATATTGAATA+TGG | 0.285356 | 3_1:+34450541 | Msa0356320:CDS |
| GAGACTGTCGCTGTCTCATT+TGG | 0.289073 | 3_1:+34450383 | Msa0356320:CDS |
| TTTGTTTCCAATTGATCAAT+TGG | 0.321512 | 3_1:+34450776 | Msa0356320:three_prime_UTR |
| AGACTGTCGCTGTCTCATTT+GGG | 0.324258 | 3_1:+34450384 | Msa0356320:CDS |
| AAGAAATCCAATTGATCAAT+TGG | 0.360164 | 3_1:-34450783 | None:intergenic |
| TTATGTTAAGCTTGCTACTT+TGG | 0.363249 | 3_1:+34450031 | Msa0356320:CDS |
| AAAGGAACCCGCAGACGGAC+AGG | 0.371754 | 3_1:-34450323 | None:intergenic |
| AGCTTAACATAAGTCATTGT+TGG | 0.383649 | 3_1:-34450020 | None:intergenic |
| CGACTACTTGAAGATGGCTT+TGG | 0.383706 | 3_1:+34450666 | Msa0356320:CDS |
| GCAGAACGTTACTTCAAGAT+TGG | 0.399752 | 3_1:+34450589 | Msa0356320:CDS |
| AATGAGACAGCGACAGTCTC+TGG | 0.403366 | 3_1:-34450380 | None:intergenic |
| ATTGATCAATTGGATTTCTT+CGG | 0.409409 | 3_1:+34450786 | Msa0356320:three_prime_UTR |
| CCGCAAGGTGGCACCTCAAA+TGG | 0.416828 | 3_1:-34450352 | None:intergenic |
| CATCTTCAACGTTCTTCGCC+TGG | 0.418134 | 3_1:-34450297 | None:intergenic |
| CGAGACATATCATTCTTAAG+TGG | 0.433054 | 3_1:-34450695 | None:intergenic |
| CCATATTCAATATCAGCATT+AGG | 0.437256 | 3_1:-34450541 | None:intergenic |
| CACCTCAAATGGTGAACAAA+AGG | 0.457550 | 3_1:-34450341 | None:intergenic |
| GGTACTTGCATAAATCCAAC+TGG | 0.464601 | 3_1:+34450418 | Msa0356320:CDS |
| GATGGGCCCTGTCCGTCTGC+GGG | 0.473400 | 3_1:+34450316 | Msa0356320:CDS |
| GCCATTTGCAGTAATCGTCC+AGG | 0.474127 | 3_1:+34450279 | Msa0356320:intron |
| TCTTCGGTATGTATTGTGCA+TGG | 0.484118 | 3_1:+34450802 | Msa0356320:three_prime_UTR |
| CAGGCGAAGAACGTTGAAGA+TGG | 0.486221 | 3_1:+34450298 | Msa0356320:CDS |
| GAGTGCATCAAGAAGGGAAG+TGG | 0.522512 | 3_1:+34450499 | Msa0356320:CDS |
| CTTCGGTATGTATTGTGCAT+GGG | 0.523431 | 3_1:+34450803 | Msa0356320:three_prime_UTR |
| ATAGTATGTTCAGAACCAGT+TGG | 0.528893 | 3_1:-34450433 | None:intergenic |
| AAGGAACCCGCAGACGGACA+GGG | 0.536435 | 3_1:-34450322 | None:intergenic |
| AATTGATCAATTGGAAACAA+AGG | 0.536616 | 3_1:-34450774 | None:intergenic |
| TGAAAACGACTACTTGAAGA+TGG | 0.537160 | 3_1:+34450660 | Msa0356320:CDS |
| AGATGGGCCCTGTCCGTCTG+CGG | 0.541954 | 3_1:+34450315 | Msa0356320:CDS |
| TCATGCCGAGTGCATCAAGA+AGG | 0.559241 | 3_1:+34450492 | Msa0356320:CDS |
| CAGTCTCTGGCATTGCCGCA+AGG | 0.559864 | 3_1:-34450367 | None:intergenic |
| CCATTTGAGGTGCCACCTTG+CGG | 0.562830 | 3_1:+34450352 | Msa0356320:CDS |
| AGGCGAAGAACGTTGAAGAT+GGG | 0.564248 | 3_1:+34450299 | Msa0356320:CDS |
| GACTGTCGCTGTCTCATTTG+GGG | 0.567094 | 3_1:+34450385 | Msa0356320:CDS |
| ACTTCCCTTCTTGATGCACT+CGG | 0.605609 | 3_1:-34450497 | None:intergenic |
| GAACAAAAGGAACCCGCAGA+CGG | 0.605747 | 3_1:-34450328 | None:intergenic |
| ATAAATATACATACAGAATG+TGG | 0.608227 | 3_1:-34450069 | None:intergenic |
| CGTTCTGCTTCATCTACAGA+GGG | 0.621559 | 3_1:-34450574 | None:intergenic |
| CATGCCGAGTGCATCAAGAA+GGG | 0.625240 | 3_1:+34450493 | Msa0356320:CDS |
| ATGCTGATATTGAATATGGA+TGG | 0.639133 | 3_1:+34450545 | Msa0356320:CDS |
| AGTGCATCAAGAAGGGAAGT+GGG | 0.648471 | 3_1:+34450500 | Msa0356320:CDS |
| ACGTTCTGCTTCATCTACAG+AGG | 0.657683 | 3_1:-34450575 | None:intergenic |
| TCTCTGGCATTGCCGCAAGG+TGG | 0.681603 | 3_1:-34450364 | None:intergenic |
| ACATACTATGAAGATGATCG+AGG | 0.709642 | 3_1:+34450447 | Msa0356320:CDS |
| TAGATGCATGATAACATGCA+TGG | 0.728301 | 3_1:-34450733 | None:intergenic |
| CATGCACATGATAACATGCG+TGG | 0.735483 | 3_1:-34450853 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:34450116-34450135 | Msa0356320:intron | 15.0% |
| !! | TGAATAGAATGTATATATTT+AGG | - | chr3_1:34450227-34450246 | None:intergenic | 15.0% |
| !!! | TTAAGAAATTTTTAACTACA+GGG | - | chr3_1:34450621-34450640 | None:intergenic | 15.0% |
| !!! | TTTAAGAAATTTTTAACTAC+AGG | - | chr3_1:34450622-34450641 | None:intergenic | 15.0% |
| !! | TCGATATATATTTATATGTT+AGG | + | chr3_1:34450116-34450135 | Msa0356320:intron | 15.0% |
| !! | TGAATAGAATGTATATATTT+AGG | - | chr3_1:34450227-34450246 | None:intergenic | 15.0% |
| !!! | TTAAGAAATTTTTAACTACA+GGG | - | chr3_1:34450621-34450640 | None:intergenic | 15.0% |
| !!! | TTTAAGAAATTTTTAACTAC+AGG | - | chr3_1:34450622-34450641 | None:intergenic | 15.0% |
| !! | ATAAATATACATACAGAATG+TGG | - | chr3_1:34450072-34450091 | None:intergenic | 20.0% |
| !! | TGTATATATTTAGGAAAGTT+TGG | - | chr3_1:34450218-34450237 | None:intergenic | 20.0% |
| !! | ATAAATATACATACAGAATG+TGG | - | chr3_1:34450072-34450091 | None:intergenic | 20.0% |
| !! | TGTATATATTTAGGAAAGTT+TGG | - | chr3_1:34450218-34450237 | None:intergenic | 20.0% |
| ! | AATTGATCAATTGGAAACAA+AGG | - | chr3_1:34450777-34450796 | None:intergenic | 25.0% |
| ! | TTTGTTTCCAATTGATCAAT+TGG | + | chr3_1:34450776-34450795 | Msa0356320:three_prime_UTR | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:34450786-34450805 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:34450786-34450805 | Msa0356320:three_prime_UTR | 25.0% |
| ! | AATTGATCAATTGGAAACAA+AGG | - | chr3_1:34450777-34450796 | None:intergenic | 25.0% |
| ! | TTTGTTTCCAATTGATCAAT+TGG | + | chr3_1:34450776-34450795 | Msa0356320:three_prime_UTR | 25.0% |
| ! | AAGAAATCCAATTGATCAAT+TGG | - | chr3_1:34450786-34450805 | None:intergenic | 25.0% |
| ! | ATTGATCAATTGGATTTCTT+CGG | + | chr3_1:34450786-34450805 | Msa0356320:three_prime_UTR | 25.0% |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:34450023-34450042 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:34450031-34450050 | Msa0356320:CDS | 30.0% |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:34450544-34450563 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:34450541-34450560 | Msa0356320:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:34450545-34450564 | Msa0356320:CDS | 30.0% | |
| !! | GAAATTTTTAACTACAGGGT+TGG | - | chr3_1:34450617-34450636 | None:intergenic | 30.0% |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:34450023-34450042 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:34450031-34450050 | Msa0356320:CDS | 30.0% |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:34450544-34450563 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:34450541-34450560 | Msa0356320:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:34450545-34450564 | Msa0356320:CDS | 30.0% | |
| !! | GAAATTTTTAACTACAGGGT+TGG | - | chr3_1:34450617-34450636 | None:intergenic | 30.0% |
| CATTCTATTCACACGTGTAT+TGG | + | chr3_1:34450236-34450255 | Msa0356320:intron | 35.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:34450264-34450283 | None:intergenic | 35.0% | |
| ! | TTCCTTTTGTTCACCATTTG+AGG | + | chr3_1:34450339-34450358 | Msa0356320:CDS | 35.0% |
| !! | CTCATTTGGGGTATAGTTTT+TGG | + | chr3_1:34450397-34450416 | Msa0356320:CDS | 35.0% |
| ATAGTATGTTCAGAACCAGT+TGG | - | chr3_1:34450436-34450455 | None:intergenic | 35.0% | |
| ACATACTATGAAGATGATCG+AGG | + | chr3_1:34450447-34450466 | Msa0356320:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:34450478-34450497 | None:intergenic | 35.0% |
| !! | GTCGTTTTCATTAGAGTTTG+AGG | - | chr3_1:34450650-34450669 | None:intergenic | 35.0% |
| TGAAAACGACTACTTGAAGA+TGG | + | chr3_1:34450660-34450679 | Msa0356320:CDS | 35.0% | |
| CGAGACATATCATTCTTAAG+TGG | - | chr3_1:34450698-34450717 | None:intergenic | 35.0% | |
| TAGATGCATGATAACATGCA+TGG | - | chr3_1:34450736-34450755 | None:intergenic | 35.0% | |
| CATTCTATTCACACGTGTAT+TGG | + | chr3_1:34450236-34450255 | Msa0356320:intron | 35.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:34450264-34450283 | None:intergenic | 35.0% | |
| ! | TTCCTTTTGTTCACCATTTG+AGG | + | chr3_1:34450339-34450358 | Msa0356320:CDS | 35.0% |
| !! | CTCATTTGGGGTATAGTTTT+TGG | + | chr3_1:34450397-34450416 | Msa0356320:CDS | 35.0% |
| ATAGTATGTTCAGAACCAGT+TGG | - | chr3_1:34450436-34450455 | None:intergenic | 35.0% | |
| ACATACTATGAAGATGATCG+AGG | + | chr3_1:34450447-34450466 | Msa0356320:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:34450478-34450497 | None:intergenic | 35.0% |
| !! | GTCGTTTTCATTAGAGTTTG+AGG | - | chr3_1:34450650-34450669 | None:intergenic | 35.0% |
| TGAAAACGACTACTTGAAGA+TGG | + | chr3_1:34450660-34450679 | Msa0356320:CDS | 35.0% | |
| CGAGACATATCATTCTTAAG+TGG | - | chr3_1:34450698-34450717 | None:intergenic | 35.0% | |
| TAGATGCATGATAACATGCA+TGG | - | chr3_1:34450736-34450755 | None:intergenic | 35.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:34450277-34450296 | None:intergenic | 40.0% | |
| CACCTCAAATGGTGAACAAA+AGG | - | chr3_1:34450344-34450363 | None:intergenic | 40.0% | |
| GGTACTTGCATAAATCCAAC+TGG | + | chr3_1:34450418-34450437 | Msa0356320:CDS | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:34450589-34450608 | Msa0356320:CDS | 40.0% | |
| TCTTCGGTATGTATTGTGCA+TGG | + | chr3_1:34450802-34450821 | Msa0356320:three_prime_UTR | 40.0% | |
| CTTCGGTATGTATTGTGCAT+GGG | + | chr3_1:34450803-34450822 | Msa0356320:three_prime_UTR | 40.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:34450277-34450296 | None:intergenic | 40.0% | |
| CACCTCAAATGGTGAACAAA+AGG | - | chr3_1:34450344-34450363 | None:intergenic | 40.0% | |
| GGTACTTGCATAAATCCAAC+TGG | + | chr3_1:34450418-34450437 | Msa0356320:CDS | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:34450589-34450608 | Msa0356320:CDS | 40.0% | |
| TCTTCGGTATGTATTGTGCA+TGG | + | chr3_1:34450802-34450821 | Msa0356320:three_prime_UTR | 40.0% | |
| CTTCGGTATGTATTGTGCAT+GGG | + | chr3_1:34450803-34450822 | Msa0356320:three_prime_UTR | 40.0% | |
| AGGCGAAGAACGTTGAAGAT+GGG | + | chr3_1:34450299-34450318 | Msa0356320:CDS | 45.0% | |
| AGACTGTCGCTGTCTCATTT+GGG | + | chr3_1:34450384-34450403 | Msa0356320:CDS | 45.0% | |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:34450500-34450519 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:34450500-34450519 | Msa0356320:CDS | 45.0% | |
| CGTTCTGCTTCATCTACAGA+GGG | - | chr3_1:34450577-34450596 | None:intergenic | 45.0% | |
| ACGTTCTGCTTCATCTACAG+AGG | - | chr3_1:34450578-34450597 | None:intergenic | 45.0% | |
| CGACTACTTGAAGATGGCTT+TGG | + | chr3_1:34450666-34450685 | Msa0356320:CDS | 45.0% | |
| AGGCGAAGAACGTTGAAGAT+GGG | + | chr3_1:34450299-34450318 | Msa0356320:CDS | 45.0% | |
| AGACTGTCGCTGTCTCATTT+GGG | + | chr3_1:34450384-34450403 | Msa0356320:CDS | 45.0% | |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:34450500-34450519 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:34450500-34450519 | Msa0356320:CDS | 45.0% | |
| CGTTCTGCTTCATCTACAGA+GGG | - | chr3_1:34450577-34450596 | None:intergenic | 45.0% | |
| ACGTTCTGCTTCATCTACAG+AGG | - | chr3_1:34450578-34450597 | None:intergenic | 45.0% | |
| CGACTACTTGAAGATGGCTT+TGG | + | chr3_1:34450666-34450685 | Msa0356320:CDS | 45.0% | |
| GCCATTTGCAGTAATCGTCC+AGG | + | chr3_1:34450279-34450298 | Msa0356320:intron | 50.0% | |
| GCCTGGACGATTACTGCAAA+TGG | - | chr3_1:34450283-34450302 | None:intergenic | 50.0% | |
| CATCTTCAACGTTCTTCGCC+TGG | - | chr3_1:34450300-34450319 | None:intergenic | 50.0% | |
| CAGGCGAAGAACGTTGAAGA+TGG | + | chr3_1:34450298-34450317 | Msa0356320:CDS | 50.0% | |
| GAACAAAAGGAACCCGCAGA+CGG | - | chr3_1:34450331-34450350 | None:intergenic | 50.0% | |
| AATGAGACAGCGACAGTCTC+TGG | - | chr3_1:34450383-34450402 | None:intergenic | 50.0% | |
| GAGACTGTCGCTGTCTCATT+TGG | + | chr3_1:34450383-34450402 | Msa0356320:CDS | 50.0% | |
| GACTGTCGCTGTCTCATTTG+GGG | + | chr3_1:34450385-34450404 | Msa0356320:CDS | 50.0% | |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:34450492-34450511 | Msa0356320:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:34450493-34450512 | Msa0356320:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:34450499-34450518 | Msa0356320:CDS | 50.0% | |
| GCCATTTGCAGTAATCGTCC+AGG | + | chr3_1:34450279-34450298 | Msa0356320:intron | 50.0% | |
| GCCTGGACGATTACTGCAAA+TGG | - | chr3_1:34450283-34450302 | None:intergenic | 50.0% | |
| CATCTTCAACGTTCTTCGCC+TGG | - | chr3_1:34450300-34450319 | None:intergenic | 50.0% | |
| CAGGCGAAGAACGTTGAAGA+TGG | + | chr3_1:34450298-34450317 | Msa0356320:CDS | 50.0% | |
| GAACAAAAGGAACCCGCAGA+CGG | - | chr3_1:34450331-34450350 | None:intergenic | 50.0% | |
| AATGAGACAGCGACAGTCTC+TGG | - | chr3_1:34450383-34450402 | None:intergenic | 50.0% | |
| GAGACTGTCGCTGTCTCATT+TGG | + | chr3_1:34450383-34450402 | Msa0356320:CDS | 50.0% | |
| GACTGTCGCTGTCTCATTTG+GGG | + | chr3_1:34450385-34450404 | Msa0356320:CDS | 50.0% | |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:34450492-34450511 | Msa0356320:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:34450493-34450512 | Msa0356320:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:34450499-34450518 | Msa0356320:CDS | 50.0% | |
| ! | CCATTTGAGGTGCCACCTTG+CGG | + | chr3_1:34450352-34450371 | Msa0356320:CDS | 55.0% |
| ! | CCATTTGAGGTGCCACCTTG+CGG | + | chr3_1:34450352-34450371 | Msa0356320:CDS | 55.0% |
| AAGGAACCCGCAGACGGACA+GGG | - | chr3_1:34450325-34450344 | None:intergenic | 60.0% | |
| AAAGGAACCCGCAGACGGAC+AGG | - | chr3_1:34450326-34450345 | None:intergenic | 60.0% | |
| CCGCAAGGTGGCACCTCAAA+TGG | - | chr3_1:34450355-34450374 | None:intergenic | 60.0% | |
| TCTCTGGCATTGCCGCAAGG+TGG | - | chr3_1:34450367-34450386 | None:intergenic | 60.0% | |
| CAGTCTCTGGCATTGCCGCA+AGG | - | chr3_1:34450370-34450389 | None:intergenic | 60.0% | |
| AAGGAACCCGCAGACGGACA+GGG | - | chr3_1:34450325-34450344 | None:intergenic | 60.0% | |
| AAAGGAACCCGCAGACGGAC+AGG | - | chr3_1:34450326-34450345 | None:intergenic | 60.0% | |
| CCGCAAGGTGGCACCTCAAA+TGG | - | chr3_1:34450355-34450374 | None:intergenic | 60.0% | |
| TCTCTGGCATTGCCGCAAGG+TGG | - | chr3_1:34450367-34450386 | None:intergenic | 60.0% | |
| CAGTCTCTGGCATTGCCGCA+AGG | - | chr3_1:34450370-34450389 | None:intergenic | 60.0% | |
| AGATGGGCCCTGTCCGTCTG+CGG | + | chr3_1:34450315-34450334 | Msa0356320:CDS | 65.0% | |
| AGATGGGCCCTGTCCGTCTG+CGG | + | chr3_1:34450315-34450334 | Msa0356320:CDS | 65.0% | |
| GATGGGCCCTGTCCGTCTGC+GGG | + | chr3_1:34450316-34450335 | Msa0356320:CDS | 70.0% | |
| GATGGGCCCTGTCCGTCTGC+GGG | + | chr3_1:34450316-34450335 | Msa0356320:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 34449968 | 34450867 | 34449968 | ID=Msa0356320;Name=Msa0356320 |
| chr3_1 | mRNA | 34449968 | 34450867 | 34449968 | ID=Msa0356320-mRNA-1;Parent=Msa0356320;Name=Msa0356320-mRNA-1;_AED=0.04;_eAED=0.04;_QI=58|1|1|1|1|1|2|165|154 |
| chr3_1 | exon | 34449968 | 34450077 | 34449968 | ID=Msa0356320-mRNA-1:exon:6512;Parent=Msa0356320-mRNA-1 |
| chr3_1 | exon | 34450290 | 34450867 | 34450290 | ID=Msa0356320-mRNA-1:exon:6513;Parent=Msa0356320-mRNA-1 |
| chr3_1 | five_prime_UTR | 34449968 | 34450025 | 34449968 | ID=Msa0356320-mRNA-1:five_prime_utr;Parent=Msa0356320-mRNA-1 |
| chr3_1 | CDS | 34450026 | 34450077 | 34450026 | ID=Msa0356320-mRNA-1:cds;Parent=Msa0356320-mRNA-1 |
| chr3_1 | CDS | 34450290 | 34450702 | 34450290 | ID=Msa0356320-mRNA-1:cds;Parent=Msa0356320-mRNA-1 |
| chr3_1 | three_prime_UTR | 34450703 | 34450867 | 34450703 | ID=Msa0356320-mRNA-1:three_prime_utr;Parent=Msa0356320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
