AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0623750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0623750 MtrunA17_Chr4g0006131 93.083 506 33 2 1 504 1 506 0.0 949
Msa0623750 MtrunA17_Chr4g0006111 80.705 482 90 2 20 498 43 524 0.0 807
Msa0623750 MtrunA17_Chr4g0033261 66.116 484 151 8 19 498 18 492 0.0 633
Msa0623750 MtrunA17_Chr4g0033231 63.693 482 162 9 21 498 20 492 0.0 615
Msa0623750 MtrunA17_Chr2g0329191 58.859 491 162 10 38 499 30 509 0.0 571
Msa0623750 MtrunA17_Chr2g0329201 57.545 497 172 8 32 499 21 507 0.0 567
Msa0623750 MtrunA17_Chr4g0033271 58.811 488 162 8 42 500 35 512 0.0 559
Msa0623750 MtrunA17_Chr4g0033311 56.164 511 180 9 17 498 19 514 0.0 557
Msa0623750 MtrunA17_Chr3g0088441 57.200 500 170 9 28 498 29 513 0.0 555
Msa0623750 MtrunA17_Chr4g0033201 56.237 489 175 7 41 500 35 513 0.0 555
Msa0623750 MtrunA17_Chr4g0033321 58.351 485 163 8 42 497 33 507 0.0 552
Msa0623750 MtrunA17_Chr4g0033191 57.084 487 170 9 41 498 42 518 0.0 552
Msa0623750 MtrunA17_Chr4g0033401 58.144 485 164 8 42 497 34 508 0.0 551
Msa0623750 MtrunA17_Chr6g0482131 56.531 490 174 7 42 502 36 515 0.0 550
Msa0623750 MtrunA17_Chr4g0033341 55.842 505 183 10 23 500 53 544 0.0 545
Msa0623750 MtrunA17_Chr4g0033331 56.495 485 172 7 42 497 39 513 0.0 537
Msa0623750 MtrunA17_Chr6g0482071 55.489 501 182 9 33 502 26 516 0.0 535
Msa0623750 MtrunA17_Chr6g0482081 55.714 490 179 7 42 502 36 516 0.0 520
Msa0623750 MtrunA17_Chr2g0301231 66.076 395 125 3 109 498 1 391 0.0 519
Msa0623750 MtrunA17_Chr2g0329321 53.226 496 167 10 32 498 28 487 1.49e-176 505
Msa0623750 MtrunA17_Chr4g0010501 50.503 497 201 9 31 498 13 493 5.37e-168 484
Msa0623750 MtrunA17_Chr5g0430451 49.046 524 180 10 20 499 18 498 5.48e-157 456
Msa0623750 MtrunA17_Chr4g0043091 47.347 490 216 7 39 498 25 502 9.57e-157 455
Msa0623750 MtrunA17_Chr3g0087261 48.317 505 215 9 23 497 19 507 5.02e-155 451
Msa0623750 MtrunA17_Chr3g0087271 48.200 500 216 10 26 497 24 508 2.81e-148 434
Msa0623750 MtrunA17_Chr4g0042171 43.687 499 236 8 32 498 14 499 4.05e-141 416
Msa0623750 MtrunA17_Chr3g0090111 44.328 476 234 7 41 498 18 480 2.00e-135 400
Msa0623750 MtrunA17_Chr4g0074561 43.776 482 229 11 47 497 40 510 2.18e-134 399
Msa0623750 MtrunA17_Chr3g0090131 43.697 476 238 8 41 498 20 483 7.50e-133 394
Msa0623750 MtrunA17_Chr4g0074551 44.286 490 236 8 39 501 47 526 2.19e-131 392
Msa0623750 MtrunA17_Chr2g0317841 43.299 485 235 10 41 497 31 503 4.48e-131 390
Msa0623750 MtrunA17_Chr2g0288021 42.073 492 245 10 42 504 35 515 9.90e-130 387
Msa0623750 MtrunA17_Chr2g0317821 42.887 485 237 10 41 497 31 503 2.56e-129 386
Msa0623750 MtrunA17_Chr6g0482941 42.515 501 240 12 31 501 32 514 5.98e-127 379
Msa0623750 MtrunA17_Chr2g0288071 42.570 498 248 9 32 501 57 544 1.24e-125 377
Msa0623750 MtrunA17_Chr6g0482951 40.964 498 252 10 31 501 32 514 5.37e-124 372
Msa0623750 MtrunA17_Chr7g0242691 37.673 507 267 8 20 498 9 494 4.49e-113 344
Msa0623750 MtrunA17_Chr4g0006971 40.580 483 236 8 44 497 29 489 2.34e-112 342
Msa0623750 MtrunA17_Chr7g0242681 40.082 489 241 9 39 498 35 500 3.41e-112 342
Msa0623750 MtrunA17_Chr5g0428831 39.139 488 245 9 43 501 28 492 8.06e-112 341
Msa0623750 MtrunA17_Chr1g0195611 39.139 488 244 9 43 501 28 491 1.19e-111 340
Msa0623750 MtrunA17_Chr7g0234131 40.270 519 255 16 9 497 39 532 1.52e-110 338
Msa0623750 MtrunA17_Chr7g0234111 39.105 514 267 11 10 500 44 534 1.37e-108 333
Msa0623750 MtrunA17_Chr7g0234091 38.824 510 270 10 9 497 43 531 1.83e-108 333
Msa0623750 MtrunA17_Chr3g0087201 46.064 343 142 8 185 499 17 344 5.06e-92 284
Msa0623750 MtrunA17_Chr5g0418871 47.059 306 132 5 61 338 2 305 3.97e-91 281
Msa0623750 MtrunA17_Chr1g0195641 38.832 394 195 7 44 409 29 404 3.96e-84 266
Msa0623750 MtrunA17_Chr7g0230651 38.874 373 182 7 88 436 18 368 3.21e-81 258
Msa0623750 MtrunA17_Chr3g0087191 62.500 152 56 1 34 184 14 165 9.69e-63 202
Msa0623750 MtrunA17_Chr7g0227561 39.394 264 112 5 43 285 47 283 8.91e-58 194
Msa0623750 MtrunA17_Chr7g0236731 44.196 224 103 5 130 331 28 251 1.04e-45 161
Msa0623750 MtrunA17_Chr4g0068871 27.465 426 210 13 105 502 183 537 1.12e-30 125
Msa0623750 MtrunA17_Chr5g0418861 51.111 90 43 1 409 497 1 90 6.68e-26 101
Msa0623750 MtrunA17_Chr8g0352881 42.697 89 50 1 246 333 62 150 5.60e-15 72.8
Msa0623750 MtrunA17_Chr2g0301221 74.359 39 10 0 47 85 70 108 1.32e-13 67.4
Msa0623750 MtrunA17_Chr7g0227591 46.429 56 30 0 445 500 13 68 1.38e-11 60.1
Msa0623750 MtrunA17_Chr7g0236741 37.931 58 36 0 445 502 10 67 5.46e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0623750 AT5G44640.1 47.505 501 218 9 31 501 20 505 3.46e-158 459
Msa0623750 AT2G44450.1 48.200 500 215 10 31 501 20 504 1.71e-157 457
Msa0623750 AT5G42260.1 47.667 493 213 9 31 493 20 497 1.07e-154 451
Msa0623750 AT1G26560.1 47.639 487 214 9 41 497 31 506 7.93e-151 441
Msa0623750 AT3G60130.1 46.185 498 223 9 31 498 19 501 1.11e-149 438
Msa0623750 AT2G44480.1 46.122 490 226 7 39 500 32 511 2.95e-147 432
Msa0623750 AT2G44480.3 46.122 490 226 7 39 500 63 542 7.49e-147 432
Msa0623750 AT2G44490.1 44.286 490 232 8 44 501 16 496 3.24e-146 431
Msa0623750 AT2G25630.1 45.363 496 211 9 31 497 19 483 1.35e-145 427
Msa0623750 AT3G60120.1 45.219 502 223 9 34 499 6 491 6.29e-145 427
Msa0623750 AT5G24550.1 46.436 491 221 8 42 500 32 512 1.02e-144 426
Msa0623750 AT5G54570.1 45.051 495 226 10 36 497 24 505 2.22e-144 425
Msa0623750 AT3G60140.1 46.356 494 220 10 38 498 22 503 1.77e-140 417
Msa0623750 AT5G24540.1 45.902 488 228 8 42 500 32 512 6.43e-139 411
Msa0623750 AT5G36890.2 44.842 475 232 7 43 498 17 480 1.42e-138 409
Msa0623750 AT5G36890.1 44.842 475 232 7 43 498 17 480 1.67e-138 409
Msa0623750 AT1G51470.1 45.155 485 225 10 38 497 41 509 1.79e-135 402
Msa0623750 AT3G03640.1 43.164 512 244 9 19 498 17 513 2.14e-134 399
Msa0623750 AT1G47600.1 44.948 485 226 11 38 497 41 509 2.35e-134 399
Msa0623750 AT3G18080.1 43.763 489 228 10 42 500 39 510 2.78e-133 396
Msa0623750 AT1G47600.2 44.948 485 225 12 38 497 41 508 5.70e-133 395
Msa0623750 AT2G44460.1 44.960 496 235 7 32 498 19 505 1.10e-132 397
Msa0623750 AT3G09260.1 42.449 490 244 6 39 499 32 512 1.09e-130 390
Msa0623750 AT1G75940.1 41.948 503 248 8 31 497 23 517 2.02e-130 389
Msa0623750 AT2G44470.3 42.000 500 247 9 30 497 17 505 2.19e-129 389
Msa0623750 AT3G18070.3 42.466 511 238 13 22 501 9 494 3.13e-129 385
Msa0623750 AT1G66280.1 43.737 487 233 8 41 497 35 510 4.06e-129 386
Msa0623750 AT3G18070.1 42.661 511 243 13 22 501 9 500 6.57e-129 384
Msa0623750 AT1G66270.1 43.522 494 224 10 41 497 35 510 2.55e-128 384
Msa0623750 AT3G60130.2 46.353 425 184 8 103 498 40 449 4.56e-127 378
Msa0623750 AT2G32860.2 40.675 504 257 10 32 503 84 577 2.12e-126 382
Msa0623750 AT1G61820.1 41.107 506 258 11 24 500 13 507 4.30e-126 378
Msa0623750 AT1G52400.3 41.517 501 248 10 30 498 29 516 5.78e-126 378
Msa0623750 AT1G52400.1 41.517 501 248 10 30 498 29 516 5.78e-126 378
Msa0623750 AT1G66270.2 43.320 494 223 11 41 497 35 508 7.01e-126 377
Msa0623750 AT2G32860.1 40.079 509 252 12 32 503 84 576 7.05e-126 380
Msa0623750 AT3G21370.1 42.159 491 239 11 42 498 33 512 1.80e-124 374
Msa0623750 AT5G28510.1 40.891 494 247 8 39 497 36 519 2.33e-123 371
Msa0623750 AT3G60130.3 45.519 424 178 8 103 498 40 438 7.20e-123 367
Msa0623750 AT2G44480.2 45.346 419 192 6 109 500 1 409 8.53e-123 366
Msa0623750 AT4G21760.2 41.529 484 241 11 47 503 59 527 1.39e-121 367
Msa0623750 AT5G25980.2 40.583 515 256 13 14 498 29 523 7.72e-120 363
Msa0623750 AT5G26000.1 42.094 487 238 10 42 497 38 511 2.18e-119 361
Msa0623750 AT5G54570.3 42.630 441 208 9 36 444 24 451 1.60e-118 356
Msa0623750 AT4G21760.1 40.994 483 235 11 47 503 59 517 1.76e-118 359
Msa0623750 AT5G54570.2 44.893 421 187 9 109 497 1 408 3.85e-117 352
Msa0623750 AT1G61810.1 39.754 488 255 9 42 500 33 510 2.19e-114 348
Msa0623750 AT1G02850.2 40.082 489 239 9 39 498 23 486 1.95e-113 345
Msa0623750 AT4G27830.1 39.192 495 251 10 31 497 12 484 5.30e-113 344
Msa0623750 AT5G24540.2 43.721 430 207 7 42 443 32 454 1.41e-111 338
Msa0623750 AT3G62750.1 38.477 486 254 11 31 497 14 473 3.38e-111 339
Msa0623750 AT3G62750.2 38.477 486 254 11 31 497 40 499 1.52e-110 338
Msa0623750 AT1G02850.5 38.281 512 239 9 39 498 23 509 4.76e-110 337
Msa0623750 AT1G61810.3 40.430 465 239 9 42 477 33 488 1.01e-108 334
Msa0623750 AT1G02850.4 38.207 513 239 10 39 498 23 510 2.93e-108 332
Msa0623750 AT4G27820.1 38.540 493 249 11 33 497 16 482 5.70e-108 331
Msa0623750 AT1G02850.1 39.139 488 218 9 39 498 23 459 5.91e-107 327
Msa0623750 AT3G60140.2 46.000 400 178 9 38 408 22 412 6.89e-107 327
Msa0623750 AT2G44470.1 40.449 445 223 8 30 443 17 450 5.18e-106 324
Msa0623750 AT4G22100.1 38.969 485 247 11 43 500 23 485 1.37e-104 322
Msa0623750 AT2G44450.2 46.196 368 155 9 162 501 1 353 1.80e-103 314
Msa0623750 AT3G62740.1 36.437 494 258 12 31 497 14 478 1.43e-101 314
Msa0623750 AT1G52400.2 40.000 445 223 9 30 443 29 460 1.27e-100 310
Msa0623750 AT1G60090.2 37.810 484 250 11 42 498 24 483 1.36e-100 312
Msa0623750 AT5G25980.3 39.216 459 231 11 14 444 29 467 2.40e-100 310
Msa0623750 AT5G25980.1 39.216 459 231 11 14 444 29 467 2.40e-100 310
Msa0623750 AT1G45191.4 37.888 483 245 9 43 498 30 484 1.25e-99 309
Msa0623750 AT5G26000.2 40.509 432 215 8 42 444 38 456 1.45e-98 305
Msa0623750 AT1G45191.6 37.681 483 257 9 43 498 30 495 1.91e-98 306
Msa0623750 AT1G45191.2 37.681 483 252 10 43 498 30 490 2.47e-98 306
Msa0623750 AT1G60090.1 37.143 490 252 12 42 498 24 490 4.27e-98 305
Msa0623750 AT1G45191.1 37.475 491 259 10 43 498 30 507 4.34e-97 303
Msa0623750 AT3G62750.4 37.327 434 228 10 31 446 40 447 1.30e-93 292
Msa0623750 AT2G44470.2 44.277 332 157 5 30 333 17 348 5.52e-93 288
Msa0623750 AT2G44480.4 49.502 301 125 5 39 312 63 363 3.27e-92 286
Msa0623750 AT1G61810.5 38.095 420 222 8 109 500 1 410 3.06e-88 277
Msa0623750 AT5G48375.1 38.851 435 193 12 41 462 37 411 1.29e-87 276
Msa0623750 AT4G27830.2 37.650 417 211 9 109 497 1 396 5.40e-87 274
Msa0623750 AT3G62740.2 36.574 432 219 11 31 436 14 416 1.53e-86 273
Msa0623750 AT3G62750.7 42.769 325 160 7 31 337 14 330 2.15e-86 271
Msa0623750 AT3G62750.8 42.769 325 160 7 31 337 14 330 2.15e-86 271
Msa0623750 AT1G02850.3 38.005 421 191 7 39 408 23 424 1.92e-85 270
Msa0623750 AT3G62750.3 42.769 325 160 7 31 337 40 356 3.03e-85 270
Msa0623750 AT3G18070.4 42.773 339 163 7 22 333 9 343 5.06e-85 268
Msa0623750 AT3G62750.6 36.520 408 220 9 109 497 1 388 1.97e-83 265
Msa0623750 AT3G62750.5 36.520 408 220 9 109 497 1 388 1.97e-83 265
Msa0623750 AT1G61810.4 37.879 396 208 8 42 408 33 419 4.66e-83 264
Msa0623750 AT4G27820.2 36.691 417 216 9 109 497 1 397 4.84e-82 261
Msa0623750 AT4G27820.3 36.691 417 216 9 109 497 1 397 4.84e-82 261
Msa0623750 AT1G61820.3 39.037 374 191 8 155 500 4 368 2.19e-81 258
Msa0623750 AT2G44460.2 42.391 368 174 7 160 498 1 359 1.32e-80 258
Msa0623750 AT1G60270.1 41.641 329 160 6 42 344 24 346 3.50e-77 247
Msa0623750 AT1G45191.5 41.325 317 154 5 43 333 30 340 7.61e-76 244
Msa0623750 AT1G45191.3 41.325 317 154 5 43 333 30 340 9.23e-76 244
Msa0623750 AT3G18070.2 40.290 345 161 10 187 501 94 423 7.20e-70 229
Msa0623750 AT3G18070.2 45.783 83 44 1 22 103 9 91 6.06e-16 80.5
Msa0623750 AT2G44480.5 41.135 282 153 4 222 500 34 305 1.37e-68 223
Msa0623750 AT1G51490.1 39.169 337 174 7 49 361 27 356 9.70e-67 221
Msa0623750 AT3G18070.7 42.657 286 143 8 222 501 41 311 1.26e-64 212
Msa0623750 AT1G61810.2 40.892 269 132 4 42 284 33 300 1.87e-64 212
Msa0623750 AT1G60270.2 38.434 281 136 7 109 362 1 271 4.39e-51 176
Msa0623750 AT3G18070.5 37.008 254 118 8 187 410 94 335 4.98e-38 142
Msa0623750 AT3G18070.5 45.783 83 44 1 22 103 9 91 4.04e-16 80.1
Msa0623750 AT5G16580.1 33.219 292 152 10 187 454 27 299 5.19e-35 133
Msa0623750 AT3G18070.6 39.487 195 100 6 222 410 41 223 4.55e-33 126
Msa0623750 AT3G06510.2 25.586 512 275 14 51 502 83 548 3.56e-32 130
Msa0623750 AT3G06510.1 25.646 503 252 15 51 502 83 514 6.05e-30 124

Find 138 sgRNAs with CRISPR-Local

Find 547 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGATACATGGGGTGATTT+TGG 0.137457 4_3:-1065762 None:intergenic
CTTGAACATAATAGAATTAT+TGG 0.142938 4_3:+1065523 Msa0623750:CDS
GATATATGCTTCAAGGAATT+TGG 0.182257 4_3:+1063989 Msa0623750:CDS
GAGCAATCTAAGAGTCTTAT+TGG 0.231240 4_3:+1064434 Msa0623750:CDS
ACTGTTAATGTGACTTTAAC+AGG 0.248704 4_3:+1064575 Msa0623750:CDS
GGGGAAGATCCCAATGAAAA+AGG 0.264707 4_3:-1063429 None:intergenic
CAGGCTCAAAATGGTATAAT+AGG 0.277472 4_3:+1064145 Msa0623750:CDS
ACGATTATCATAACAGAAAA+TGG 0.280720 4_3:+1064899 Msa0623750:CDS
CAAAGCTCACACAGTATTAT+TGG 0.283801 4_3:-1065568 None:intergenic
CTTGTTTAAGTGCATGTATT+CGG 0.290606 4_3:-1056486 None:intergenic
ATACTTTGCATGGTCCCTTT+TGG 0.290939 4_3:+1065387 Msa0623750:CDS
TGATCACATTCCTCATTGTT+TGG 0.292631 4_3:-1056562 None:intergenic
TACAAAACGTACCTGGTAAT+TGG 0.306037 4_3:-1061072 None:intergenic
AGCTCTCTGCCCGGTGGTTT+AGG 0.309537 4_3:+1065494 Msa0623750:CDS
GACGGATACACTGTGCGTTT+TGG 0.311280 4_3:+1065427 Msa0623750:CDS
CGTCCTCCACGTTGCAGATC+TGG 0.314713 4_3:+1065992 Msa0623750:three_prime_UTR
ATGTTTGTCCAAAGGGGATT+CGG 0.336791 4_3:+1064837 Msa0623750:CDS
TGTGGTCTCTTTCTCTTTGA+AGG 0.337983 4_3:-1059024 None:intergenic
ACCACATATCAGGCTCAAAA+TGG 0.345183 4_3:+1064136 Msa0623750:CDS
TTCTTGTTTCGCTCAGGTCT+TGG 0.348865 4_3:+1065911 Msa0623750:three_prime_UTR
TCTAATGGGTCAGTTGAGTA+TGG 0.349718 4_3:-1064196 None:intergenic
GACGCCCTTGATTTCATGTT+TGG 0.356653 4_3:+1064235 Msa0623750:CDS
GATCACATTCCTCATTGTTT+GGG 0.362382 4_3:-1056561 None:intergenic
GCAGTGAACGTTGGTAAATC+TGG 0.366493 4_3:-1064410 None:intergenic
TGATCACTATCATCGTTATA+AGG 0.379609 4_3:+1062841 Msa0623750:CDS
TTGTTTAAGTGCATGTATTC+GGG 0.382758 4_3:-1056485 None:intergenic
CAATATCCTTGGCCAAGATA+TGG 0.382965 4_3:-1063124 None:intergenic
GATCCAGACTGTATAGGAAT+TGG 0.386737 4_3:-1064518 None:intergenic
AGGCAAGGTGTGAATGTAAA+AGG 0.387936 4_3:+1065364 Msa0623750:intron
CTATTACTTGGCAATATCCT+TGG 0.390771 4_3:-1063135 None:intergenic
TGTTTGTCCAAAGGGGATTC+GGG 0.400286 4_3:+1064838 Msa0623750:CDS
TCCATTCAAAGTTGTCCAAA+AGG 0.405927 4_3:-1065402 None:intergenic
TGGCTATATGTTTGTCCAAA+GGG 0.410402 4_3:+1064830 Msa0623750:CDS
CATACAGATTCTCCATATCT+TGG 0.418726 4_3:+1063112 Msa0623750:CDS
GTGGTCTCTTTCTCTTTGAA+GGG 0.424614 4_3:-1059023 None:intergenic
TTTATACAGCCGCTAACAAC+AGG 0.426920 4_3:+1064356 Msa0623750:CDS
ATACTCATCTTGTAAGGCCT+GGG 0.427696 4_3:-1063449 None:intergenic
ATCAATGAGCTACTTGCTAA+TGG 0.429019 4_3:+1063298 Msa0623750:CDS
TTCATTGATTGAATCTGCAT+TGG 0.431690 4_3:-1065964 None:intergenic
CAGGCCTTACAAGATGAGTA+TGG 0.435383 4_3:+1063451 Msa0623750:CDS
GCATAAATAGAGGCAATAAC+AGG 0.437739 4_3:-1060987 None:intergenic
ATTGTATAAAACCACATATC+AGG 0.437772 4_3:+1064126 Msa0623750:CDS
ACATAAGACACCAAGCTTGC+TGG 0.447607 4_3:-1064386 None:intergenic
AACCACCGGGCAGAGAGCTT+AGG 0.450563 4_3:-1065490 None:intergenic
TTGCCTTTCTTGTTTCGCTC+AGG 0.451091 4_3:+1065905 Msa0623750:three_prime_UTR
AGTGAAGATGGAAGAGGAAA+GGG 0.452598 4_3:+1062053 Msa0623750:CDS
ATGGAAGAGGAAAGGGTACA+TGG 0.453182 4_3:+1062060 Msa0623750:CDS
CATACTCATCTTGTAAGGCC+TGG 0.455210 4_3:-1063450 None:intergenic
AGTAGGTCCCGAATCCCCTT+TGG 0.457019 4_3:-1064845 None:intergenic
CTTCTTCTTCATCAATAAAG+AGG 0.457465 4_3:+1065715 Msa0623750:three_prime_UTR
ATGACAGATAAGAATAAAGA+TGG 0.458312 4_3:+1064708 Msa0623750:intron
CCGCCTGATCCAGACTGTAT+AGG 0.458956 4_3:-1064524 None:intergenic
TAGCAAGTAGCTCATTGATC+AGG 0.461889 4_3:-1063294 None:intergenic
ACACTTTGAATACATCAGAT+TGG 0.462336 4_3:+1064056 Msa0623750:CDS
CTCATTGTTTGGGACTGCCG+TGG 0.464701 4_3:-1056551 None:intergenic
ACCATCCAAACATGAAATCA+AGG 0.473106 4_3:-1064240 None:intergenic
CTTCGTGGATATATGCTTCA+AGG 0.473903 4_3:+1063982 Msa0623750:CDS
ACCACCGGGCAGAGAGCTTA+GGG 0.475465 4_3:-1065489 None:intergenic
GTATATATGTACCTGGTGTA+TGG 0.475730 4_3:-1062094 None:intergenic
ATCACTCGAAGAGGCGCTCA+TGG 0.478154 4_3:+1065168 Msa0623750:CDS
TCGTCAAGTACGGTGCAATC+AGG 0.479472 4_3:+1059057 Msa0623750:CDS
TTGGAGACAGAGTAAAGCAT+TGG 0.480355 4_3:+1064008 Msa0623750:CDS
GAAGGTGCTGTAAGTGAAGA+TGG 0.482306 4_3:+1062041 Msa0623750:CDS
AATAAAGATGGGACATACAT+TGG 0.483048 4_3:+1064720 Msa0623750:CDS
ATTCCTATACAGTCTGGATC+AGG 0.483543 4_3:+1064521 Msa0623750:CDS
CAAAATGGTATAATAGGCAT+TGG 0.486147 4_3:+1064151 Msa0623750:CDS
GCATTGGATTAAACTCTCAC+TGG 0.490284 4_3:+1064167 Msa0623750:CDS
AGCAATCTAAGAGTCTTATT+GGG 0.490733 4_3:+1064435 Msa0623750:CDS
AAACAATGAGGAATGTGATC+AGG 0.493545 4_3:+1056564 Msa0623750:exon
CAATAAAGAGGGGTGATTGA+AGG 0.496497 4_3:+1065727 Msa0623750:three_prime_UTR
GCCTCCATACTCATCTTGTA+AGG 0.497866 4_3:-1063455 None:intergenic
CCATTCAAAGTTGTCCAAAA+GGG 0.499789 4_3:-1065401 None:intergenic
TTCTTCTTCATCAATAAAGA+GGG 0.501801 4_3:+1065716 Msa0623750:three_prime_UTR
CCCTTGATTTCATGTTTGGA+TGG 0.504970 4_3:+1064239 Msa0623750:CDS
TGGAGACAGAGTAAAGCATT+GGG 0.508305 4_3:+1064009 Msa0623750:CDS
TCTGGATCAGGCGGCGCTGA+CGG 0.508743 4_3:+1064533 Msa0623750:CDS
CAGCTGCATGAGCAAGAAGT+TGG 0.509222 4_3:-1064096 None:intergenic
AGGAATTGGTTTCGTTGCAT+TGG 0.510612 4_3:-1064504 None:intergenic
AAACCAATTCCTATACAGTC+TGG 0.511299 4_3:+1064515 Msa0623750:CDS
AAAGAGAAAGAGACCACATT+CGG 0.513482 4_3:+1059029 Msa0623750:CDS
AAAACTGTCAGCATAAATAG+AGG 0.520509 4_3:-1060997 None:intergenic
ATATCTATGAAATATAACTA+AGG 0.524017 4_3:-1056527 None:intergenic
AGGAAAGTATCCAGCAAGCT+TGG 0.526086 4_3:+1064376 Msa0623750:CDS
GACAACTTTGAATGGAATGA+CGG 0.527539 4_3:+1065409 Msa0623750:CDS
TGGTCTCTTTCTCTTTGAAG+GGG 0.531186 4_3:-1059022 None:intergenic
GGATACTTTCCTGTTGTTAG+CGG 0.535598 4_3:-1064365 None:intergenic
AGACCTGAGCGAAACAAGAA+AGG 0.536233 4_3:-1065908 None:intergenic
TACTGGCTCCTCCAATTACC+AGG 0.536244 4_3:+1061061 Msa0623750:CDS
GAAGTTGGTTGTGTGTGGCC+TGG 0.537777 4_3:-1064081 None:intergenic
AATATGTGCAGGCTGCAACT+TGG 0.539391 4_3:+1064810 Msa0623750:intron
AAGTGAAGATGGAAGAGGAA+AGG 0.544229 4_3:+1062052 Msa0623750:CDS
CAAGAAACTTCCTAAACCAC+CGG 0.545200 4_3:-1065504 None:intergenic
TTGGCTATATGTTTGTCCAA+AGG 0.547740 4_3:+1064829 Msa0623750:CDS
TTTCCTTTGTGTACAACAGT+AGG 0.554600 4_3:-1064862 None:intergenic
TCATTGTTTGGGACTGCCGT+GGG 0.557175 4_3:-1056550 None:intergenic
GGTCTCTTTCTCTTTGAAGG+GGG 0.568914 4_3:-1059021 None:intergenic
ACTGCATACAGGGATGGTAA+AGG 0.570057 4_3:+1062793 Msa0623750:intron
GTATTCAAAGTGTAAGAGAA+TGG 0.570526 4_3:-1064046 None:intergenic
GATTCTCCATATCTTGGCCA+AGG 0.571513 4_3:+1063118 Msa0623750:CDS
GACACCCTAAGCTCTCTGCC+CGG 0.573913 4_3:+1065485 Msa0623750:CDS
CTTGACGATATTTCCGAATG+TGG 0.577303 4_3:-1059042 None:intergenic
GTGTTGATAATGTAGTATGA+AGG 0.577599 4_3:+1062023 Msa0623750:intron
GCTGTAAGTGAAGATGGAAG+AGG 0.581432 4_3:+1062047 Msa0623750:CDS
TGGGACATACATTGGAGCAT+GGG 0.581493 4_3:+1064728 Msa0623750:CDS
ATGGGACATACATTGGAGCA+TGG 0.582897 4_3:+1064727 Msa0623750:CDS
TGGAAGAGGAAAGGGTACAT+GGG 0.585427 4_3:+1062061 Msa0623750:CDS
TGTAAAATATGATTCCTGCT+TGG 0.587277 4_3:-1063267 None:intergenic
TATATATGTACCTGGTGTAT+GGG 0.589583 4_3:-1062093 None:intergenic
TTCGGAAATATCGTCAAGTA+CGG 0.592831 4_3:+1059047 Msa0623750:CDS
GAATACATCAGATTGGTACC+AGG 0.597455 4_3:+1064063 Msa0623750:CDS
AAAACGTACCTGGTAATTGG+AGG 0.599628 4_3:-1061069 None:intergenic
TATATTTCATAGATATCCCA+CGG 0.600055 4_3:+1056534 Msa0623750:five_prime_UTR
GATATATTTGCCCATACACC+AGG 0.601896 4_3:+1062083 Msa0623750:CDS
GATTGCTCTGCAGTGAACGT+TGG 0.602380 4_3:-1064419 None:intergenic
GGCTATATGTTTGTCCAAAG+GGG 0.602874 4_3:+1064831 Msa0623750:CDS
AGCTCACACAGTATTATTGG+TGG 0.605868 4_3:-1065565 None:intergenic
CATACAGGGATGGTAAAGGA+TGG 0.607856 4_3:+1062797 Msa0623750:intron
TGACAGATAAGAATAAAGAT+GGG 0.612129 4_3:+1064709 Msa0623750:intron
GTGTGTTTGTCGCATTTGTG+TGG 0.615318 4_3:+1065876 Msa0623750:three_prime_UTR
ATGTAAAAGGATACTTTGCA+TGG 0.622027 4_3:+1065377 Msa0623750:CDS
AGTGGCGGTGTAAACCAAGC+AGG 0.626808 4_3:+1063253 Msa0623750:CDS
TCTTCTTCATCAATAAAGAG+GGG 0.629116 4_3:+1065717 Msa0623750:three_prime_UTR
AGCAAGAAGTTGGTTGTGTG+TGG 0.636210 4_3:-1064086 None:intergenic
CACGGCAGTCCCAAACAATG+AGG 0.637240 4_3:+1056552 Msa0623750:exon
CCATCCAAACATGAAATCAA+GGG 0.640294 4_3:-1064239 None:intergenic
TACTCATCTTGTAAGGCCTG+GGG 0.645812 4_3:-1063448 None:intergenic
TGCATTGGCAGCATACATGC+TGG 0.650774 4_3:-1064489 None:intergenic
CCTATACAGTCTGGATCAGG+CGG 0.652705 4_3:+1064524 Msa0623750:CDS
TATGCAGAAGGAAAACTAAG+TGG 0.653344 4_3:+1063235 Msa0623750:intron
TCCTACACTATCACTCGAAG+AGG 0.658030 4_3:+1065159 Msa0623750:CDS
AAGAAACTTCCTAAACCACC+GGG 0.661886 4_3:-1065503 None:intergenic
GGACCTACTGTTGTACACAA+AGG 0.673741 4_3:+1064859 Msa0623750:CDS
ACCCTAAGCTCTCTGCCCGG+TGG 0.683098 4_3:+1065488 Msa0623750:CDS
GCAGAAGGAAAACTAAGTGG+CGG 0.686824 4_3:+1063238 Msa0623750:intron
GCCTTACAAGATGAGTATGG+AGG 0.687554 4_3:+1063454 Msa0623750:CDS
TATCCAGATCTGCAACGTGG+AGG 0.690239 4_3:-1065995 None:intergenic
GCCTCTTCGAGTGATAGTGT+AGG 0.709813 4_3:-1065160 None:intergenic
ATGTATCCAGATCTGCAACG+TGG 0.727755 4_3:-1065998 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAAATAATATAAAAA+TGG - chr4_3:1057380-1057399 None:intergenic 0.0%
!!! TATTTTAAATAAATAAATAA+AGG - chr4_3:1058829-1058848 None:intergenic 0.0%
!!! TATTATTTTCCATTATTTTT+AGG + chr4_3:1057222-1057241 Msa0623750:intron 10.0%
!!! ATTATTTTCCATTATTTTTA+GGG + chr4_3:1057223-1057242 Msa0623750:intron 10.0%
!!! AAACTTTTTTTTTTTGTTTA+GGG - chr4_3:1057622-1057641 None:intergenic 10.0%
!!! TTGTATTTTTTTTTAGTATA+TGG - chr4_3:1058374-1058393 None:intergenic 10.0%
!!! TAAAGGTTTAATTATTTTTT+AGG - chr4_3:1058812-1058831 None:intergenic 10.0%
!! AAAAAGCAAAAATATATTTA+AGG - chr4_3:1059133-1059152 None:intergenic 10.0%
!!! TTAAATATATTTTTGCTTTT+TGG + chr4_3:1059132-1059151 Msa0623750:intron 10.0%
!! AAATAAAGAAAACAAATAAT+GGG - chr4_3:1059620-1059639 None:intergenic 10.0%
!! AAAATAAAGAAAACAAATAA+TGG - chr4_3:1059621-1059640 None:intergenic 10.0%
!!! ATTATTTGTTTTCTTTATTT+TGG + chr4_3:1059620-1059639 Msa0623750:intron 10.0%
!!! ATTGAATAAATTTTATTTAG+AGG + chr4_3:1060423-1060442 Msa0623750:intron 10.0%
!!! TTTATTCTTTTATTTATAGT+TGG + chr4_3:1060500-1060519 Msa0623750:intron 10.0%
!! TTAAATGAAGAAAAAAAATT+GGG - chr4_3:1060565-1060584 None:intergenic 10.0%
!! TTTAAATGAAGAAAAAAAAT+TGG - chr4_3:1060566-1060585 None:intergenic 10.0%
!!! ATTTTTTTTCTTCATTTAAA+TGG + chr4_3:1060566-1060585 Msa0623750:intron 10.0%
!!! ATTTCATTAATGTTTATTTT+AGG + chr4_3:1060957-1060976 Msa0623750:intron 10.0%
!!! TTTCATTAATGTTTATTTTA+GGG + chr4_3:1060958-1060977 Msa0623750:intron 10.0%
!! AAATAGATAAAAAAAATTGA+AGG - chr4_3:1062358-1062377 None:intergenic 10.0%
!!! TTCAATTTTTTTTATCTATT+TGG + chr4_3:1062357-1062376 Msa0623750:intron 10.0%
!!! AATATATTTTTTTACACTAT+CGG - chr4_3:1062582-1062601 None:intergenic 10.0%
!! AAAAAAGATTTCAAATTATA+CGG - chr4_3:1064323-1064342 None:intergenic 10.0%
!! TTCTAATAAATTTAAATCAT+AGG + chr4_3:1065118-1065137 Msa0623750:intron 10.0%
!!! TCACTTATTTTAATAAAAAA+AGG - chr4_3:1065799-1065818 None:intergenic 10.0%
!! ATATCTATGAAATATAACTA+AGG - chr4_3:1056530-1056549 None:intergenic 15.0%
!!! ATATCAACTCTTTTTAATAT+TGG + chr4_3:1056620-1056639 Msa0623750:intron 15.0%
!! GCTTAAATATAATTTATTTG+TGG - chr4_3:1057528-1057547 None:intergenic 15.0%
!! AAATACTTATCATTTGATTA+TGG + chr4_3:1057560-1057579 Msa0623750:intron 15.0%
!!! CAAACTTTTTTTTTTTGTTT+AGG - chr4_3:1057623-1057642 None:intergenic 15.0%
!! ACAAAAAATATTGTAGTTTA+GGG - chr4_3:1057655-1057674 None:intergenic 15.0%
!! TACAAAAAATATTGTAGTTT+AGG - chr4_3:1057656-1057675 None:intergenic 15.0%
!!! CTACAATATTTTTTGTAATT+AGG + chr4_3:1057659-1057678 Msa0623750:intron 15.0%
!! AAAATTTGGATTTCAAAATA+GGG - chr4_3:1058476-1058495 None:intergenic 15.0%
!! TAAAATTTGGATTTCAAAAT+AGG - chr4_3:1058477-1058496 None:intergenic 15.0%
!! TTGAAAATATATAATACAGT+GGG - chr4_3:1058502-1058521 None:intergenic 15.0%
!! TCCTGAAAAAATATATTATA+GGG - chr4_3:1058534-1058553 None:intergenic 15.0%
!! ATCCTGAAAAAATATATTAT+AGG - chr4_3:1058535-1058554 None:intergenic 15.0%
!!! ATATATTTTTTCAGGATTTT+AGG + chr4_3:1058538-1058557 Msa0623750:intron 15.0%
!!! TATATTTTTTCAGGATTTTA+GGG + chr4_3:1058539-1058558 Msa0623750:intron 15.0%
!!! CAAGAAAAAAAATTAGTTTA+AGG + chr4_3:1058726-1058745 Msa0623750:intron 15.0%
!!! TTTTAGGTTTCTAAATTATT+TGG - chr4_3:1058796-1058815 None:intergenic 15.0%
!! AAAATAAAGAAAACAAAGAA+AGG + chr4_3:1059503-1059522 Msa0623750:intron 15.0%
!! AAATAAAGAAAACAAAGAAA+GGG + chr4_3:1059504-1059523 Msa0623750:intron 15.0%
!! TCAAAACTAATATATTTGTT+GGG - chr4_3:1059846-1059865 None:intergenic 15.0%
!! TTCAAAACTAATATATTTGT+TGG - chr4_3:1059847-1059866 None:intergenic 15.0%
!!! TATATTAGTTTTGAATTAGT+TGG + chr4_3:1059852-1059871 Msa0623750:intron 15.0%
!! CAATCAATTATAGATAAAAT+TGG + chr4_3:1060161-1060180 Msa0623750:intron 15.0%
!!! CAATAACTATTTTAAAAAGT+TGG - chr4_3:1060207-1060226 None:intergenic 15.0%
!!! TAAAAAAGTGTTTTTATTCT+TGG - chr4_3:1060376-1060395 None:intergenic 15.0%
!!! TAATTAAGTTTTATTGTTCT+TGG - chr4_3:1060881-1060900 None:intergenic 15.0%
!!! TTCATTAATGTTTATTTTAG+GGG + chr4_3:1060959-1060978 Msa0623750:intron 15.0%
!!! GGAATTAAACATAATTTTTT+TGG - chr4_3:1061175-1061194 None:intergenic 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG - chr4_3:1061349-1061368 None:intergenic 15.0%
!! CATTTAATGATGTATATATA+TGG + chr4_3:1061276-1061295 Msa0623750:intron 15.0%
!! TATATATATGGTTCATAATA+TGG + chr4_3:1061288-1061307 Msa0623750:intron 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG + chr4_3:1061349-1061368 Msa0623750:intron 15.0%
!! TTATTTAAGAAATTGAAACT+GGG - chr4_3:1061712-1061731 None:intergenic 15.0%
!! TTTATTTAAGAAATTGAAAC+TGG - chr4_3:1061713-1061732 None:intergenic 15.0%
!! TATTATTGAATCTTAAGAAT+TGG + chr4_3:1061972-1061991 Msa0623750:intron 15.0%
!!! AAATAATTTTAGTGATCAAA+AGG + chr4_3:1062947-1062966 Msa0623750:intron 15.0%
!!! ATTAAACATTTTCTATTACT+TGG - chr4_3:1063150-1063169 None:intergenic 15.0%
!! GTAATAGAAAATGTTTAATT+TGG + chr4_3:1063151-1063170 Msa0623750:intron 15.0%
!! TATGATATACTAATAAAGTA+TGG - chr4_3:1063338-1063357 None:intergenic 15.0%
!! TTCATAATAATACAAATTGA+TGG + chr4_3:1063373-1063392 Msa0623750:intron 15.0%
!! ATTCAAGAAATAATAAATTG+AGG + chr4_3:1063884-1063903 Msa0623750:intron 15.0%
!!! TTAACTATATTGTTGTTTTT+TGG + chr4_3:1065329-1065348 Msa0623750:intron 15.0%
!!! ATCGACTAATATTTTTACAA+AGG - chr4_3:1056602-1056621 None:intergenic 20.0%
!! AATGTTATTATGTATAGAGT+TGG + chr4_3:1056701-1056720 Msa0623750:intron 20.0%
!! TTCCTTCAAAAAATAAAAGT+TGG + chr4_3:1056729-1056748 Msa0623750:intron 20.0%
!! TCATTATTTAACCATCAATT+TGG + chr4_3:1057021-1057040 Msa0623750:intron 20.0%
!! TAGTTTAAAAACCAAATTGA+TGG - chr4_3:1057035-1057054 None:intergenic 20.0%
!!! AAAACTTCCACATTTTTAAA+AGG - chr4_3:1057357-1057376 None:intergenic 20.0%
!!! AAAACAAACGCTAATTTTAA+GGG - chr4_3:1057456-1057475 None:intergenic 20.0%
!!! TAAAACAAACGCTAATTTTA+AGG - chr4_3:1057457-1057476 None:intergenic 20.0%
!! ATTATGGAGAATTAATTGTA+TGG + chr4_3:1057496-1057515 Msa0623750:intron 20.0%
!! TTATGGAGAATTAATTGTAT+GGG + chr4_3:1057497-1057516 Msa0623750:intron 20.0%
!! TTTAGGGATAAAATATTTCA+AGG - chr4_3:1057606-1057625 None:intergenic 20.0%
!! ATGATAGAGATATATGATAA+AGG + chr4_3:1057768-1057787 Msa0623750:intron 20.0%
!! TGATAGAGATATATGATAAA+GGG + chr4_3:1057769-1057788 Msa0623750:intron 20.0%
!! ATATAGAAAAAAGATGTACT+AGG + chr4_3:1057807-1057826 Msa0623750:intron 20.0%
!! TATAGAAAAAAGATGTACTA+GGG + chr4_3:1057808-1057827 Msa0623750:intron 20.0%
!! ATTATCTAATTATCTGCAAA+AGG - chr4_3:1058213-1058232 None:intergenic 20.0%
!! ATATATATATATCGCATTGT+AGG + chr4_3:1058316-1058335 Msa0623750:intron 20.0%
!! CCAAAAAATATAATAGTTCA+AGG - chr4_3:1058403-1058422 None:intergenic 20.0%
!!! CCTTGAACTATTATATTTTT+TGG + chr4_3:1058400-1058419 Msa0623750:intron 20.0%
!! TGAAAATATATAATACAGTG+GGG - chr4_3:1058501-1058520 None:intergenic 20.0%
!! CTTGAAAATATATAATACAG+TGG - chr4_3:1058503-1058522 None:intergenic 20.0%
!! CTGAAAAAATATATTATAGG+GGG - chr4_3:1058532-1058551 None:intergenic 20.0%
!! CCTGAAAAAATATATTATAG+GGG - chr4_3:1058533-1058552 None:intergenic 20.0%
!!! ATATTTTTTCAGGATTTTAG+GGG + chr4_3:1058540-1058559 Msa0623750:intron 20.0%
!!! CTCACTGTTTTATAATTTTT+AGG - chr4_3:1058575-1058594 None:intergenic 20.0%
!! CTAAAAATTATAAAACAGTG+AGG + chr4_3:1058573-1058592 Msa0623750:intron 20.0%
!! AAAATAACGTTATAAAGTTG+AGG - chr4_3:1058943-1058962 None:intergenic 20.0%
!!! TTAGGCATTTTAAATAGTTA+TGG - chr4_3:1058980-1058999 None:intergenic 20.0%
!!! ACTATTTAAAATGCCTAATT+TGG + chr4_3:1058982-1059001 Msa0623750:intron 20.0%
!! AGTTTCTATATTGTAACATT+AGG + chr4_3:1059265-1059284 Msa0623750:intron 20.0%
!!! TATTGTTTCATTCTTGTTTT+CGG + chr4_3:1059371-1059390 Msa0623750:intron 20.0%
!!! TTATTTTTGCCTTTTTAAGA+GGG - chr4_3:1059490-1059509 None:intergenic 20.0%
!!! TTTATTTTTGCCTTTTTAAG+AGG - chr4_3:1059491-1059510 None:intergenic 20.0%
!! AATAAAGAAAACAAAGAAAG+GGG + chr4_3:1059505-1059524 Msa0623750:intron 20.0%
!!! CAAAACTAATATATTTGTTG+GGG - chr4_3:1059845-1059864 None:intergenic 20.0%
!! AATAATCTATCTGTTTACAT+TGG + chr4_3:1060110-1060129 Msa0623750:intron 20.0%
!! TAAGGATAAAATACTTCTTT+AGG - chr4_3:1060454-1060473 None:intergenic 20.0%
!! CATAAAAAAAAATACCTTGA+AGG + chr4_3:1060686-1060705 Msa0623750:intron 20.0%
!!! ATAAGCAAAATTCACTTTTT+AGG - chr4_3:1061248-1061267 None:intergenic 20.0%
!! TTACATAAAGAGAAATTCTT+AGG + chr4_3:1061380-1061399 Msa0623750:intron 20.0%
!! TATTACTTTCTCTAAATTTC+TGG - chr4_3:1061852-1061871 None:intergenic 20.0%
!!! TCTTTTCTTATATTTTAGAC+CGG - chr4_3:1061881-1061900 None:intergenic 20.0%
!! GATGTATCTGATTTATATTA+TGG + chr4_3:1061928-1061947 Msa0623750:intron 20.0%
!! TATATATGTATATATGTACC+TGG - chr4_3:1062104-1062123 None:intergenic 20.0%
!! TAAAAAAAATTGAAGGTCTT+GGG - chr4_3:1062351-1062370 None:intergenic 20.0%
!! ATAAAAAAAATTGAAGGTCT+TGG - chr4_3:1062352-1062371 None:intergenic 20.0%
!! ATATAAATCATCTGAAAGTT+TGG - chr4_3:1062458-1062477 None:intergenic 20.0%
!!! ATCATATTTTTCTTCTAATG+TGG + chr4_3:1062759-1062778 Msa0623750:intron 20.0%
!! GAAATTATATATCACATTAG+AGG - chr4_3:1062869-1062888 None:intergenic 20.0%
!!! AACCATTTTTACATCTTAAT+AGG + chr4_3:1063053-1063072 Msa0623750:intron 20.0%
!! TTCCTATTAAGATGTAAAAA+TGG - chr4_3:1063058-1063077 None:intergenic 20.0%
!!! AGAGAAAAATTAGAATGTTT+TGG + chr4_3:1063545-1063564 Msa0623750:intron 20.0%
!!! AATCTTTTTTATCTGTTTAC+AGG + chr4_3:1064333-1064352 Msa0623750:intron 20.0%
!! AAAACAATTTATGTCAAACA+AGG - chr4_3:1064676-1064695 None:intergenic 20.0%
!! TTCTGATTTAAGTAAATAGA+GGG - chr4_3:1065258-1065277 None:intergenic 20.0%
!! ATTCTGATTTAAGTAAATAG+AGG - chr4_3:1065259-1065278 None:intergenic 20.0%
!! CTTGAACATAATAGAATTAT+TGG + chr4_3:1065523-1065542 Msa0623750:CDS 20.0%
!!! TCTTTTATTTTGTGATTTAG+TGG + chr4_3:1065837-1065856 Msa0623750:three_prime_UTR 20.0%
! TATATTTCATAGATATCCCA+CGG + chr4_3:1056534-1056553 Msa0623750:five_prime_UTR 25.0%
!!! CACCAACTTTTATTTTTTGA+AGG - chr4_3:1056734-1056753 None:intergenic 25.0%
!! TTTGTACAATCGATTGTTTT+AGG + chr4_3:1056903-1056922 Msa0623750:intron 25.0%
!! TTGACTGACATTAATTTTAG+TGG - chr4_3:1056957-1056976 None:intergenic 25.0%
! CATTAAAGATGTGTTTAACA+TGG + chr4_3:1057330-1057349 Msa0623750:intron 25.0%
!! AAACAAACGCTAATTTTAAG+GGG - chr4_3:1057455-1057474 None:intergenic 25.0%
!! TATTTTGTCTTACTCTGATA+TGG - chr4_3:1057749-1057768 None:intergenic 25.0%
! AGAAGAGAGAATATATGAAA+GGG - chr4_3:1058123-1058142 None:intergenic 25.0%
! TAGAAGAGAGAATATATGAA+AGG - chr4_3:1058124-1058143 None:intergenic 25.0%
! AAAAATCCTCAAGTAGTTTA+AGG - chr4_3:1058343-1058362 None:intergenic 25.0%
!! CTACTTGAGGATTTTTAAAT+AGG + chr4_3:1058347-1058366 Msa0623750:intron 25.0%
!!! CCCCTATAATATATTTTTTC+AGG + chr4_3:1058530-1058549 Msa0623750:intron 25.0%
!!! TAACTCGCTATTTTGAAATT+CGG - chr4_3:1058607-1058626 None:intergenic 25.0%
!! AACATCACATGATTTTATTG+AGG - chr4_3:1058901-1058920 None:intergenic 25.0%
!!! ATTGTTTCATTCTTGTTTTC+GGG + chr4_3:1059372-1059391 Msa0623750:intron 25.0%
! TTATTAGAACCCTCTTAAAA+AGG + chr4_3:1059478-1059497 Msa0623750:intron 25.0%
! ATAAAGAAAACAAAGAAAGG+GGG + chr4_3:1059506-1059525 Msa0623750:intron 25.0%
!!! AACAAGTTGATAATCCAAAT+CGG - chr4_3:1059576-1059595 None:intergenic 25.0%
!!! TTTATTTTGGCCTTTTTAAG+AGG + chr4_3:1059633-1059652 Msa0623750:intron 25.0%
!!! TTATTTTGGCCTTTTTAAGA+GGG + chr4_3:1059634-1059653 Msa0623750:intron 25.0%
! TAGATTTAGTTGTAATTGTC+TGG + chr4_3:1059985-1060004 Msa0623750:intron 25.0%
! TATCCTTAAGTTTACTATGT+TGG + chr4_3:1060466-1060485 Msa0623750:intron 25.0%
! AAACCAACATAGTAAACTTA+AGG - chr4_3:1060472-1060491 None:intergenic 25.0%
! AAATAGAACATTGGAAGAAA+TGG - chr4_3:1060599-1060618 None:intergenic 25.0%
! CGAAAGAAAAAATAGAACAT+TGG - chr4_3:1060608-1060627 None:intergenic 25.0%
! AATTTGAAAATGAACCTTCA+AGG - chr4_3:1060703-1060722 None:intergenic 25.0%
! ATCTTAGTAATAAGTGAACA+TGG - chr4_3:1060731-1060750 None:intergenic 25.0%
!!! ATTAATGTTTATTTTAGGGG+CGG + chr4_3:1060962-1060981 Msa0623750:intron 25.0%
!!! TATGCTTTTGCTTTTTGTAA+CGG + chr4_3:1061142-1061161 Msa0623750:intron 25.0%
! AATTCCTAATGCTATAAGAT+TGG + chr4_3:1061189-1061208 Msa0623750:intron 25.0%
! CATTCATTTAATGATGTATG+TGG - chr4_3:1061315-1061334 None:intergenic 25.0%
!!! GATATGTGTCATGTTTTAAT+TGG + chr4_3:1061757-1061776 Msa0623750:intron 25.0%
! TATTGAATCTTAAGAATTGG+AGG + chr4_3:1061975-1061994 Msa0623750:intron 25.0%
! ATGTAGACTGATTATAATTG+GGG - chr4_3:1062407-1062426 None:intergenic 25.0%
! CATGTAGACTGATTATAATT+GGG - chr4_3:1062408-1062427 None:intergenic 25.0%
! TCATGTAGACTGATTATAAT+TGG - chr4_3:1062409-1062428 None:intergenic 25.0%
! AAGATATATAGACAAGTCAT+AGG + chr4_3:1062503-1062522 Msa0623750:intron 25.0%
!! TCTTTTCTTCAATATCTAAC+AGG - chr4_3:1062667-1062686 None:intergenic 25.0%
!! TTTTCTTCTAATGTGGTAAT+TGG + chr4_3:1062766-1062785 Msa0623750:intron 25.0%
! TAACTAACTAGTTAGTTAGT+TGG - chr4_3:1063778-1063797 None:intergenic 25.0%
! ATTCTAATGTTAGTTAGTTG+TGG - chr4_3:1063838-1063857 None:intergenic 25.0%
!! AATATGCAGAGATGATTTTA+AGG + chr4_3:1063958-1063977 Msa0623750:intron 25.0%
! ATTGTATAAAACCACATATC+AGG + chr4_3:1064126-1064145 Msa0623750:CDS 25.0%
!! ATTGGGTCATATGATTTTAT+TGG + chr4_3:1064452-1064471 Msa0623750:CDS 25.0%
!! GTTTGACATAAATTGTTTTC+TGG + chr4_3:1064677-1064696 Msa0623750:intron 25.0%
! ATGACAGATAAGAATAAAGA+TGG + chr4_3:1064708-1064727 Msa0623750:intron 25.0%
! TGACAGATAAGAATAAAGAT+GGG + chr4_3:1064709-1064728 Msa0623750:intron 25.0%
!! TTTTCTGTTATGATAATCGT+AGG - chr4_3:1064899-1064918 None:intergenic 25.0%
! ACGATTATCATAACAGAAAA+TGG + chr4_3:1064899-1064918 Msa0623750:CDS 25.0%
! GTTTATTAGACACTGAAAAA+AGG - chr4_3:1065085-1065104 None:intergenic 25.0%
!! ATTATCTTTTATCTGCAATG+AGG + chr4_3:1065227-1065246 Msa0623750:CDS 25.0%
!!! TTTTTTGGTTTTTTGTGTGA+AGG + chr4_3:1065344-1065363 Msa0623750:intron 25.0%
! TTCTTCTTCATCAATAAAGA+GGG + chr4_3:1065716-1065735 Msa0623750:three_prime_UTR 25.0%
CTTGTTTAAGTGCATGTATT+CGG - chr4_3:1056489-1056508 None:intergenic 30.0%
!!! AAGTTGGTGATTTTCATTTC+TGG + chr4_3:1056745-1056764 Msa0623750:intron 30.0%
! CTCTATTTTATGCTCTTTCT+CGG + chr4_3:1056872-1056891 Msa0623750:intron 30.0%
!!! AATCGATTGTTTTAGGACAT+GGG + chr4_3:1056910-1056929 Msa0623750:intron 30.0%
!! TTAATTTTAGTGGCATAGGT+AGG - chr4_3:1056947-1056966 None:intergenic 30.0%
!! GACATTAATTTTAGTGGCAT+AGG - chr4_3:1056951-1056970 None:intergenic 30.0%
GTCAAGATCAACATGAATTA+AGG - chr4_3:1056987-1057006 None:intergenic 30.0%
AATCCAGTATATTCTCAACA+TGG - chr4_3:1057184-1057203 None:intergenic 30.0%
!! ACATGGACCTTTTAAAAATG+TGG + chr4_3:1057347-1057366 Msa0623750:intron 30.0%
CTAATATATACCCAAACCAA+CGG - chr4_3:1057428-1057447 None:intergenic 30.0%
! AATTCTCCATAATGTCGTTT+GGG - chr4_3:1057489-1057508 None:intergenic 30.0%
TAATTCTCCATAATGTCGTT+TGG - chr4_3:1057490-1057509 None:intergenic 30.0%
AGAAGAAATATGGTAGAAAG+AGG - chr4_3:1057974-1057993 None:intergenic 30.0%
AAGAGAGAATATATGAAAGG+GGG - chr4_3:1058121-1058140 None:intergenic 30.0%
GAAGAGAGAATATATGAAAG+GGG - chr4_3:1058122-1058141 None:intergenic 30.0%
ATTGAGGCACATATATAGAT+GGG - chr4_3:1058885-1058904 None:intergenic 30.0%
TATTGAGGCACATATATAGA+TGG - chr4_3:1058886-1058905 None:intergenic 30.0%
TAGACCAAAATTCTCTTCAA+TGG + chr4_3:1059204-1059223 Msa0623750:intron 30.0%
! AACTCCATTGAAGAGAATTT+TGG - chr4_3:1059211-1059230 None:intergenic 30.0%
! TCTTCAATGGAGTTTTCTAA+GGG + chr4_3:1059217-1059236 Msa0623750:intron 30.0%
CTTCATTGAGAAGAATTTGA+AGG - chr4_3:1059247-1059266 None:intergenic 30.0%
TCATCCATAAACATCAAATG+TGG - chr4_3:1059348-1059367 None:intergenic 30.0%
!!! TTGTTTCATTCTTGTTTTCG+GGG + chr4_3:1059373-1059392 Msa0623750:intron 30.0%
! AAGAGGGTTCTAATAAAAAG+AGG - chr4_3:1059474-1059493 None:intergenic 30.0%
AAACCAAAACCCTCTTAAAA+AGG - chr4_3:1059646-1059665 None:intergenic 30.0%
! TCTATAGTTGTTATTGCGAT+TGG - chr4_3:1060016-1060035 None:intergenic 30.0%
AAAACTGTCAGCATAAATAG+AGG - chr4_3:1061000-1061019 None:intergenic 30.0%
TTTGCCAATCTTATAGCATT+AGG - chr4_3:1061196-1061215 None:intergenic 30.0%
!!! TGCTTATATTTTGAAACGGA+GGG - chr4_3:1061353-1061372 None:intergenic 30.0%
!!! TTGCTTATATTTTGAAACGG+AGG - chr4_3:1061352-1061371 None:intergenic 30.0%
!!! TGCTTATATTTTGAAACGGA+TGG + chr4_3:1061353-1061372 Msa0623750:intron 30.0%
!!! AATTTTGATTTCCTCGTAAG+AGG + chr4_3:1061549-1061568 Msa0623750:intron 30.0%
AACACTTGAAATAGCAGAAA+GGG + chr4_3:1061578-1061597 Msa0623750:intron 30.0%
GTTCATTATGTCTCTAACAA+TGG - chr4_3:1061658-1061677 None:intergenic 30.0%
TAGAGACATAATGAACCATA+TGG + chr4_3:1061662-1061681 Msa0623750:intron 30.0%
AGATGTAAGAATGATGTGTT+GGG + chr4_3:1061782-1061801 Msa0623750:intron 30.0%
AGAGAAAGTAATACTTCTTC+CGG + chr4_3:1061859-1061878 Msa0623750:intron 30.0%
!! GTGTTGATAATGTAGTATGA+AGG + chr4_3:1062023-1062042 Msa0623750:intron 30.0%
TATATATGTACCTGGTGTAT+GGG - chr4_3:1062096-1062115 None:intergenic 30.0%
TGTAGACTGATTATAATTGG+GGG - chr4_3:1062406-1062425 None:intergenic 30.0%
TGATCACTATCATCGTTATA+AGG + chr4_3:1062841-1062860 Msa0623750:CDS 30.0%
GTTAGAGTTGTTAATGCATA+TGG - chr4_3:1063212-1063231 None:intergenic 30.0%
AACTCTAACAAATATGCAGA+AGG + chr4_3:1063223-1063242 Msa0623750:intron 30.0%
TGTAAAATATGATTCCTGCT+TGG - chr4_3:1063270-1063289 None:intergenic 30.0%
ATTGATGGAATTATTGATCC+AGG + chr4_3:1063388-1063407 Msa0623750:intron 30.0%
!! ATATGTGACCCTTTTTCATT+GGG + chr4_3:1063420-1063439 Msa0623750:CDS 30.0%
! CTTTAGAGAGAAAACTACAA+AGG + chr4_3:1063619-1063638 Msa0623750:intron 30.0%
AAATCAACTATGTTGTTGGT+TGG - chr4_3:1063813-1063832 None:intergenic 30.0%
GGATAAATCAACTATGTTGT+TGG - chr4_3:1063817-1063836 None:intergenic 30.0%
GATATATGCTTCAAGGAATT+TGG + chr4_3:1063989-1064008 Msa0623750:CDS 30.0%
GTATTCAAAGTGTAAGAGAA+TGG - chr4_3:1064049-1064068 None:intergenic 30.0%
ACACTTTGAATACATCAGAT+TGG + chr4_3:1064056-1064075 Msa0623750:CDS 30.0%
CAAAATGGTATAATAGGCAT+TGG + chr4_3:1064151-1064170 Msa0623750:CDS 30.0%
!! AGCAATCTAAGAGTCTTATT+GGG + chr4_3:1064435-1064454 Msa0623750:CDS 30.0%
ACTGTTAATGTGACTTTAAC+AGG + chr4_3:1064575-1064594 Msa0623750:CDS 30.0%
AATAAAGATGGGACATACAT+TGG + chr4_3:1064720-1064739 Msa0623750:CDS 30.0%
AACAACTAAACAATATGTGC+AGG + chr4_3:1064799-1064818 Msa0623750:intron 30.0%
ATGTAAAAGGATACTTTGCA+TGG + chr4_3:1065377-1065396 Msa0623750:CDS 30.0%
! AGAAACTAGAGTTTTGCTAA+CGG - chr4_3:1065697-1065716 None:intergenic 30.0%
CTTCTTCTTCATCAATAAAG+AGG + chr4_3:1065715-1065734 Msa0623750:three_prime_UTR 30.0%
TCTTCTTCATCAATAAAGAG+GGG + chr4_3:1065717-1065736 Msa0623750:three_prime_UTR 30.0%
AAGAGAAAAACGAGATACAT+GGG - chr4_3:1065775-1065794 None:intergenic 30.0%
AAAGAGAAAAACGAGATACA+TGG - chr4_3:1065776-1065795 None:intergenic 30.0%
! TTCATTGATTGAATCTGCAT+TGG - chr4_3:1065967-1065986 None:intergenic 30.0%
GATCACATTCCTCATTGTTT+GGG - chr4_3:1056564-1056583 None:intergenic 35.0%
TGATCACATTCCTCATTGTT+TGG - chr4_3:1056565-1056584 None:intergenic 35.0%
AAACAATGAGGAATGTGATC+AGG + chr4_3:1056564-1056583 Msa0623750:exon 35.0%
TTTCAGTTCTTAAGTGACCA+CGG + chr4_3:1056823-1056842 Msa0623750:intron 35.0%
AAGCAAAATTACTGTAACCG+TGG - chr4_3:1056843-1056862 None:intergenic 35.0%
! ACGGTTACAGTAATTTTGCT+TGG + chr4_3:1056842-1056861 Msa0623750:intron 35.0%
! TTTTATGCTCTTTCTCGGTT+TGG + chr4_3:1056877-1056896 Msa0623750:intron 35.0%
TTTATGCTCTTTCTCGGTTT+GGG + chr4_3:1056878-1056897 Msa0623750:intron 35.0%
!!! CAATCGATTGTTTTAGGACA+TGG + chr4_3:1056909-1056928 Msa0623750:intron 35.0%
GAACCATGTTGAGAATATAC+TGG + chr4_3:1057178-1057197 Msa0623750:intron 35.0%
AAAATATGATGATCCACCGT+TGG + chr4_3:1057409-1057428 Msa0623750:intron 35.0%
ACTAGGGATTAAAGAGAGAT+AGG + chr4_3:1057824-1057843 Msa0623750:intron 35.0%
ACAGTGAAAGAGATAAAGAG+AGG + chr4_3:1057889-1057908 Msa0623750:intron 35.0%
CAGTGAAAGAGATAAAGAGA+GGG + chr4_3:1057890-1057909 Msa0623750:intron 35.0%
AGTGAAAGAGATAAAGAGAG+GGG + chr4_3:1057891-1057910 Msa0623750:intron 35.0%
GGAGAGTTGAAAAAAGAGAA+AGG - chr4_3:1057953-1057972 None:intergenic 35.0%
ACTCAAAGGGAGAAGAAATA+TGG - chr4_3:1057984-1058003 None:intergenic 35.0%
ATATTTCTTCTCCCTTTGAG+TGG + chr4_3:1057983-1058002 Msa0623750:intron 35.0%
TATTTCTTCTCCCTTTGAGT+GGG + chr4_3:1057984-1058003 Msa0623750:intron 35.0%
TTGTTTATCTCCCACTCAAA+GGG - chr4_3:1057997-1058016 None:intergenic 35.0%
AGAGAAGAGATGAAATGAGA+GGG - chr4_3:1058057-1058076 None:intergenic 35.0%
! GAATCAACTTTAGAGAGGAT+GGG - chr4_3:1058088-1058107 None:intergenic 35.0%
! AGAATCAACTTTAGAGAGGA+TGG - chr4_3:1058089-1058108 None:intergenic 35.0%
! AGAGAGAATCAACTTTAGAG+AGG - chr4_3:1058093-1058112 None:intergenic 35.0%
AATACAGTGGGGCTAAAATT+TGG - chr4_3:1058490-1058509 None:intergenic 35.0%
TCTGTTGAAAGCTCCAAATT+AGG - chr4_3:1058998-1059017 None:intergenic 35.0%
AAAGAGAAAGAGACCACATT+CGG + chr4_3:1059029-1059048 Msa0623750:CDS 35.0%
TTCGGAAATATCGTCAAGTA+CGG + chr4_3:1059047-1059066 Msa0623750:CDS 35.0%
! CTCTTCAATGGAGTTTTCTA+AGG + chr4_3:1059216-1059235 Msa0623750:intron 35.0%
CATTGAGAAGAATTTGAAGG+TGG - chr4_3:1059244-1059263 None:intergenic 35.0%
TCGACCACATTTGATGTTTA+TGG + chr4_3:1059341-1059360 Msa0623750:intron 35.0%
GTGGACAAAGTAACTAATCA+TGG + chr4_3:1059411-1059430 Msa0623750:intron 35.0%
AGGCAATGAATCCTACAAAA+CGG - chr4_3:1059454-1059473 None:intergenic 35.0%
AGTTACAAAAAGCGAACAAG+AGG + chr4_3:1059537-1059556 Msa0623750:intron 35.0%
CGAACAAGAGGATTTCTTTA+GGG + chr4_3:1059549-1059568 Msa0623750:intron 35.0%
CTAAGGACATAATCACTTCA+GGG - chr4_3:1059778-1059797 None:intergenic 35.0%
! TTCGACAACTGAACTTGTTT+GGG - chr4_3:1059923-1059942 None:intergenic 35.0%
! TTTCGACAACTGAACTTGTT+TGG - chr4_3:1059924-1059943 None:intergenic 35.0%
TCTATCTGTTTACATTGGAG+AGG + chr4_3:1060115-1060134 Msa0623750:intron 35.0%
AGCTAGCAAAAAATTTGCAC+AGG - chr4_3:1060528-1060547 None:intergenic 35.0%
! CATTCTGAACTCTTTTGCAA+AGG + chr4_3:1060769-1060788 Msa0623750:intron 35.0%
GCATAAATAGAGGCAATAAC+AGG - chr4_3:1060990-1061009 None:intergenic 35.0%
!!! CTGACAGTTTTGAGCTAAAT+CGG + chr4_3:1061009-1061028 Msa0623750:CDS 35.0%
!!! TTTCCGGAAGGTTTTGTTTT+TGG + chr4_3:1061038-1061057 Msa0623750:CDS 35.0%
GTACCAAAAACAAAACCTTC+CGG - chr4_3:1061044-1061063 None:intergenic 35.0%
!!! GAAGGTTTTGTTTTTGGTAC+TGG + chr4_3:1061044-1061063 Msa0623750:CDS 35.0%
TACAAAACGTACCTGGTAAT+TGG - chr4_3:1061075-1061094 None:intergenic 35.0%
ACAATGTTACAAAACGTACC+TGG - chr4_3:1061082-1061101 None:intergenic 35.0%
TGTGTATGTTACTATGCATG+TGG + chr4_3:1061099-1061118 Msa0623750:intron 35.0%
ACCCAACATATCATTCTTTC+CGG + chr4_3:1061412-1061431 Msa0623750:intron 35.0%
TCCGGAAAGAATGATATGTT+GGG - chr4_3:1061416-1061435 None:intergenic 35.0%
TTCCGGAAAGAATGATATGT+TGG - chr4_3:1061417-1061436 None:intergenic 35.0%
AACATATCATTCTTTCCGGA+AGG + chr4_3:1061416-1061435 Msa0623750:intron 35.0%
! GTTTTCTTGTAGTGATTCAC+AGG - chr4_3:1061448-1061467 None:intergenic 35.0%
CAACACTTGAAATAGCAGAA+AGG + chr4_3:1061577-1061596 Msa0623750:intron 35.0%
! AAGGGCATAAAAGAAGGATT+TGG + chr4_3:1061596-1061615 Msa0623750:intron 35.0%
GCATTTACTTACTCTCTCTT+TGG - chr4_3:1061688-1061707 None:intergenic 35.0%
CAGATGTAAGAATGATGTGT+TGG + chr4_3:1061781-1061800 Msa0623750:intron 35.0%
ATTGGAGGTTAATCTGTCAA+CGG + chr4_3:1061990-1062009 Msa0623750:intron 35.0%
GTATATATGTACCTGGTGTA+TGG - chr4_3:1062097-1062116 None:intergenic 35.0%
AAATCATGACCACACCTAAT+TGG + chr4_3:1062202-1062221 Msa0623750:intron 35.0%
CATACAGATTCTCCATATCT+TGG + chr4_3:1063112-1063131 Msa0623750:CDS 35.0%
CTATTACTTGGCAATATCCT+TGG - chr4_3:1063138-1063157 None:intergenic 35.0%
TATGCAGAAGGAAAACTAAG+TGG + chr4_3:1063235-1063254 Msa0623750:intron 35.0%
! ATCAATGAGCTACTTGCTAA+TGG + chr4_3:1063298-1063317 Msa0623750:CDS 35.0%
CAATGAAAAAGGGTCACATA+TGG - chr4_3:1063421-1063440 None:intergenic 35.0%
!! CATATGTGACCCTTTTTCAT+TGG + chr4_3:1063419-1063438 Msa0623750:CDS 35.0%
CTAGTTAGTTAGTTGGTTAG+TGG - chr4_3:1063771-1063790 None:intergenic 35.0%
!! AGATGATTTTAAGGACTTCG+TGG + chr4_3:1063967-1063986 Msa0623750:CDS 35.0%
CAGGCTCAAAATGGTATAAT+AGG + chr4_3:1064145-1064164 Msa0623750:CDS 35.0%
! CAGCAGCTTTTAGATCTAAT+GGG - chr4_3:1064213-1064232 None:intergenic 35.0%
! TCAGCAGCTTTTAGATCTAA+TGG - chr4_3:1064214-1064233 None:intergenic 35.0%
CCATCCAAACATGAAATCAA+GGG - chr4_3:1064242-1064261 None:intergenic 35.0%
ACCATCCAAACATGAAATCA+AGG - chr4_3:1064243-1064262 None:intergenic 35.0%
! GAAACGGTCAAAAAGTATAG+TGG - chr4_3:1064268-1064287 None:intergenic 35.0%
ATCCATGGTTGTTGTAGAAA+CGG - chr4_3:1064284-1064303 None:intergenic 35.0%
! GAGCAATCTAAGAGTCTTAT+TGG + chr4_3:1064434-1064453 Msa0623750:CDS 35.0%
AAACCAATTCCTATACAGTC+TGG + chr4_3:1064515-1064534 Msa0623750:CDS 35.0%
TTCATTAGGAGTGGTAAGAA+AGG - chr4_3:1064609-1064628 None:intergenic 35.0%
TGATGTATGCCATCTTCATT+AGG - chr4_3:1064623-1064642 None:intergenic 35.0%
TTGGCTATATGTTTGTCCAA+AGG + chr4_3:1064829-1064848 Msa0623750:CDS 35.0%
TGGCTATATGTTTGTCCAAA+GGG + chr4_3:1064830-1064849 Msa0623750:CDS 35.0%
TTTCCTTTGTGTACAACAGT+AGG - chr4_3:1064865-1064884 None:intergenic 35.0%
CCATTCAAAGTTGTCCAAAA+GGG - chr4_3:1065404-1065423 None:intergenic 35.0%
TCCATTCAAAGTTGTCCAAA+AGG - chr4_3:1065405-1065424 None:intergenic 35.0%
GACAACTTTGAATGGAATGA+CGG + chr4_3:1065409-1065428 Msa0623750:CDS 35.0%
CAAAGCTCACACAGTATTAT+TGG - chr4_3:1065571-1065590 None:intergenic 35.0%
AGAGAAAAACGAGATACATG+GGG - chr4_3:1065774-1065793 None:intergenic 35.0%
!!! GATTGTTTTAGGACATGGGT+TGG + chr4_3:1056914-1056933 Msa0623750:intron 40.0%
CACACGGACCCTAAAAATAA+TGG - chr4_3:1057234-1057253 None:intergenic 40.0%
!!! CATTATTTTTAGGGTCCGTG+TGG + chr4_3:1057232-1057251 Msa0623750:intron 40.0%
ATATATACCCAAACCAACGG+TGG - chr4_3:1057425-1057444 None:intergenic 40.0%
GAGAGAATGAGATGAGATAG+TGG + chr4_3:1057850-1057869 Msa0623750:intron 40.0%
GTGAAAGAGATAAAGAGAGG+GGG + chr4_3:1057892-1057911 Msa0623750:intron 40.0%
CTTGTTTATCTCCCACTCAA+AGG - chr4_3:1057998-1058017 None:intergenic 40.0%
ATGAAATGAGAGGGAGAGTT+TGG - chr4_3:1058048-1058067 None:intergenic 40.0%
GAGAGAAGAGATGAAATGAG+AGG - chr4_3:1058058-1058077 None:intergenic 40.0%
GTAGGTCCTTAAACTACTTG+AGG + chr4_3:1058334-1058353 Msa0623750:intron 40.0%
! TGGTCTCTTTCTCTTTGAAG+GGG - chr4_3:1059025-1059044 None:intergenic 40.0%
GTGGTCTCTTTCTCTTTGAA+GGG - chr4_3:1059026-1059045 None:intergenic 40.0%
TGTGGTCTCTTTCTCTTTGA+AGG - chr4_3:1059027-1059046 None:intergenic 40.0%
CTTGACGATATTTCCGAATG+TGG - chr4_3:1059045-1059064 None:intergenic 40.0%
!!! TCATTCTTGTTTTCGGGGAA+AGG + chr4_3:1059378-1059397 Msa0623750:intron 40.0%
! TGTTCACGATACCGTTTTGT+AGG + chr4_3:1059440-1059459 Msa0623750:intron 40.0%
GCGAACAAGAGGATTTCTTT+AGG + chr4_3:1059548-1059567 Msa0623750:intron 40.0%
! GATTTCTTTAGGGACCGATT+TGG + chr4_3:1059559-1059578 Msa0623750:intron 40.0%
!! TGGCCTTTTTAAGAGGGTTT+TGG + chr4_3:1059640-1059659 Msa0623750:intron 40.0%
GCTAAGGACATAATCACTTC+AGG - chr4_3:1059779-1059798 None:intergenic 40.0%
! TATATTTGTTGGGGTAGCCA+AGG - chr4_3:1059836-1059855 None:intergenic 40.0%
! TCGACAACTGAACTTGTTTG+GGG - chr4_3:1059922-1059941 None:intergenic 40.0%
AAGAACTCCTCGATAGAATG+GGG - chr4_3:1060635-1060654 None:intergenic 40.0%
CAAGAACTCCTCGATAGAAT+GGG - chr4_3:1060636-1060655 None:intergenic 40.0%
AAAACGTACCTGGTAATTGG+AGG - chr4_3:1061072-1061091 None:intergenic 40.0%
ATTCACAGGACATATCCTTC+CGG - chr4_3:1061434-1061453 None:intergenic 40.0%
! TTTGATTTCCTCGTAAGAGG+AGG + chr4_3:1061552-1061571 Msa0623750:intron 40.0%
! AGCAGAAAGGGCATAAAAGA+AGG + chr4_3:1061590-1061609 Msa0623750:intron 40.0%
TTACTCTCTCTTTGGCCATA+TGG - chr4_3:1061680-1061699 None:intergenic 40.0%
AAGTGAAGATGGAAGAGGAA+AGG + chr4_3:1062052-1062071 Msa0623750:CDS 40.0%
AGTGAAGATGGAAGAGGAAA+GGG + chr4_3:1062053-1062072 Msa0623750:CDS 40.0%
GATATATTTGCCCATACACC+AGG + chr4_3:1062083-1062102 Msa0623750:CDS 40.0%
CTAGCCAAAAACCTAGATAG+TGG + chr4_3:1062159-1062178 Msa0623750:intron 40.0%
! CGATCCACTATCTAGGTTTT+TGG - chr4_3:1062166-1062185 None:intergenic 40.0%
! AGGTGTGGTCATGATTTGTA+AGG - chr4_3:1062199-1062218 None:intergenic 40.0%
GTTTGCATGGTGGTTTATCA+TGG + chr4_3:1062265-1062284 Msa0623750:intron 40.0%
GTGGTTTATCATGGTTGTAG+TGG + chr4_3:1062274-1062293 Msa0623750:intron 40.0%
ATGGTTGTAGTGGTGTGATT+TGG + chr4_3:1062284-1062303 Msa0623750:intron 40.0%
GGGGTATGAGTAGTTGAATA+GGG - chr4_3:1062387-1062406 None:intergenic 40.0%
TAATTGGTGCAACTGCATAC+AGG + chr4_3:1062782-1062801 Msa0623750:intron 40.0%
AATTGGTGCAACTGCATACA+GGG + chr4_3:1062783-1062802 Msa0623750:intron 40.0%
CAATATCCTTGGCCAAGATA+TGG - chr4_3:1063127-1063146 None:intergenic 40.0%
TAGCAAGTAGCTCATTGATC+AGG - chr4_3:1063297-1063316 None:intergenic 40.0%
GTCACATATGGTATTTGACC+TGG - chr4_3:1063409-1063428 None:intergenic 40.0%
GGGAAGATCCCAATGAAAAA+GGG - chr4_3:1063431-1063450 None:intergenic 40.0%
ATACTCATCTTGTAAGGCCT+GGG - chr4_3:1063452-1063471 None:intergenic 40.0%
!! CTCTCTAAAGTGTGAGTGTA+TGG - chr4_3:1063609-1063628 None:intergenic 40.0%
! CAACTATGTTGTTGGTTGGT+TGG - chr4_3:1063809-1063828 None:intergenic 40.0%
CTTCGTGGATATATGCTTCA+AGG + chr4_3:1063982-1064001 Msa0623750:CDS 40.0%
TTGGAGACAGAGTAAAGCAT+TGG + chr4_3:1064008-1064027 Msa0623750:CDS 40.0%
! TGGAGACAGAGTAAAGCATT+GGG + chr4_3:1064009-1064028 Msa0623750:CDS 40.0%
GAATACATCAGATTGGTACC+AGG + chr4_3:1064063-1064082 Msa0623750:CDS 40.0%
ACCACATATCAGGCTCAAAA+TGG + chr4_3:1064136-1064155 Msa0623750:CDS 40.0%
! ACCATTTTGAGCCTGATATG+TGG - chr4_3:1064140-1064159 None:intergenic 40.0%
GCATTGGATTAAACTCTCAC+TGG + chr4_3:1064167-1064186 Msa0623750:CDS 40.0%
! TCTAATGGGTCAGTTGAGTA+TGG - chr4_3:1064199-1064218 None:intergenic 40.0%
CCCTTGATTTCATGTTTGGA+TGG + chr4_3:1064239-1064258 Msa0623750:CDS 40.0%
ACCATGGATCACGACAAAAT+TGG + chr4_3:1064295-1064314 Msa0623750:intron 40.0%
CCATGGATCACGACAAAATT+GGG + chr4_3:1064296-1064315 Msa0623750:intron 40.0%
TTTATACAGCCGCTAACAAC+AGG + chr4_3:1064356-1064375 Msa0623750:CDS 40.0%
GGATACTTTCCTGTTGTTAG+CGG - chr4_3:1064368-1064387 None:intergenic 40.0%
! AGGAATTGGTTTCGTTGCAT+TGG - chr4_3:1064507-1064526 None:intergenic 40.0%
GATCCAGACTGTATAGGAAT+TGG - chr4_3:1064521-1064540 None:intergenic 40.0%
ATTCCTATACAGTCTGGATC+AGG + chr4_3:1064521-1064540 Msa0623750:CDS 40.0%
CTTACCACTCCTAATGAAGA+TGG + chr4_3:1064611-1064630 Msa0623750:intron 40.0%
TATGCCATCTTCATTAGGAG+TGG - chr4_3:1064618-1064637 None:intergenic 40.0%
GGCTATATGTTTGTCCAAAG+GGG + chr4_3:1064831-1064850 Msa0623750:CDS 40.0%
ATGTTTGTCCAAAGGGGATT+CGG + chr4_3:1064837-1064856 Msa0623750:CDS 40.0%
!!! TGGTTTTTTGTGTGAAGGCA+AGG + chr4_3:1065349-1065368 Msa0623750:intron 40.0%
AGGCAAGGTGTGAATGTAAA+AGG + chr4_3:1065364-1065383 Msa0623750:intron 40.0%
! ATACTTTGCATGGTCCCTTT+TGG + chr4_3:1065387-1065406 Msa0623750:CDS 40.0%
! CCCTTTTGGACAACTTTGAA+TGG + chr4_3:1065401-1065420 Msa0623750:CDS 40.0%
AAGAAACTTCCTAAACCACC+GGG - chr4_3:1065506-1065525 None:intergenic 40.0%
CAAGAAACTTCCTAAACCAC+CGG - chr4_3:1065507-1065526 None:intergenic 40.0%
AGCTCACACAGTATTATTGG+TGG - chr4_3:1065568-1065587 None:intergenic 40.0%
CAATAAAGAGGGGTGATTGA+AGG + chr4_3:1065727-1065746 Msa0623750:three_prime_UTR 40.0%
TCCTTATCATGTGCACCACA+CGG - chr4_3:1057250-1057269 None:intergenic 45.0%
! ATGATGATCCACCGTTGGTT+TGG + chr4_3:1057414-1057433 Msa0623750:intron 45.0%
!! TGATGATCCACCGTTGGTTT+GGG + chr4_3:1057415-1057434 Msa0623750:intron 45.0%
AGACCTCCCAAACGACATTA+TGG + chr4_3:1057480-1057499 Msa0623750:intron 45.0%
! TCTCCATAATGTCGTTTGGG+AGG - chr4_3:1057486-1057505 None:intergenic 45.0%
! ACTTTAGAGAGGATGGGAGA+GGG - chr4_3:1058082-1058101 None:intergenic 45.0%
! AACTTTAGAGAGGATGGGAG+AGG - chr4_3:1058083-1058102 None:intergenic 45.0%
AAAAGGAGAGAGCTGAGAGA+GGG - chr4_3:1058196-1058215 None:intergenic 45.0%
! GGTCTCTTTCTCTTTGAAGG+GGG - chr4_3:1059024-1059043 None:intergenic 45.0%
!! TTGTTTTCGGGGAAAGGTCA+TGG + chr4_3:1059384-1059403 Msa0623750:intron 45.0%
CCATTCACTCATAAGAGGAG+GGG - chr4_3:1059685-1059704 None:intergenic 45.0%
GCCATTCACTCATAAGAGGA+GGG - chr4_3:1059686-1059705 None:intergenic 45.0%
TGCCATTCACTCATAAGAGG+AGG - chr4_3:1059687-1059706 None:intergenic 45.0%
GTCTGCCATTCACTCATAAG+AGG - chr4_3:1059690-1059709 None:intergenic 45.0%
TATGAGTGAATGGCAGACGA+AGG + chr4_3:1059692-1059711 Msa0623750:intron 45.0%
ATGAGTGAATGGCAGACGAA+GGG + chr4_3:1059693-1059712 Msa0623750:intron 45.0%
GAAGAACATCAGGGTGAAAC+TGG - chr4_3:1059752-1059771 None:intergenic 45.0%
TCAGGGTGAGAAGAACATCA+GGG - chr4_3:1059761-1059780 None:intergenic 45.0%
TTCAGGGTGAGAAGAACATC+AGG - chr4_3:1059762-1059781 None:intergenic 45.0%
TGATTATGTCCTTAGCCCCA+GGG + chr4_3:1059783-1059802 Msa0623750:intron 45.0%
GCGTAGCCCTTCATATACAA+GGG + chr4_3:1059806-1059825 Msa0623750:intron 45.0%
CGTAGCCCTTCATATACAAG+GGG + chr4_3:1059807-1059826 Msa0623750:intron 45.0%
GGCTACCCCTTGTATATGAA+GGG - chr4_3:1059815-1059834 None:intergenic 45.0%
AGGCTACCCCTTGTATATGA+AGG - chr4_3:1059816-1059835 None:intergenic 45.0%
TCATATACAAGGGGTAGCCT+TGG + chr4_3:1059816-1059835 Msa0623750:intron 45.0%
CCAAGAACTCCTCGATAGAA+TGG - chr4_3:1060637-1060656 None:intergenic 45.0%
CCATTCTATCGAGGAGTTCT+TGG + chr4_3:1060634-1060653 Msa0623750:intron 45.0%
TCTATCGAGGAGTTCTTGGA+TGG + chr4_3:1060638-1060657 Msa0623750:intron 45.0%
! GCTAAATCGGAGCAGTTTTC+CGG + chr4_3:1061022-1061041 Msa0623750:CDS 45.0%
!! GAAGGTGCTGTAAGTGAAGA+TGG + chr4_3:1062041-1062060 Msa0623750:CDS 45.0%
GCTGTAAGTGAAGATGGAAG+AGG + chr4_3:1062047-1062066 Msa0623750:CDS 45.0%
! ATGGAAGAGGAAAGGGTACA+TGG + chr4_3:1062060-1062079 Msa0623750:CDS 45.0%
! TGGAAGAGGAAAGGGTACAT+GGG + chr4_3:1062061-1062080 Msa0623750:CDS 45.0%
! CATGATTTGTAAGGCGCTTG+TGG - chr4_3:1062190-1062209 None:intergenic 45.0%
CATGACCACACCTAATTGGT+AGG + chr4_3:1062206-1062225 Msa0623750:intron 45.0%
CACTACCTACCAATTAGGTG+TGG - chr4_3:1062214-1062233 None:intergenic 45.0%
CACACCTAATTGGTAGGTAG+TGG + chr4_3:1062212-1062231 Msa0623750:intron 45.0%
! ACCTAATTGGTAGGTAGTGG+TGG + chr4_3:1062215-1062234 Msa0623750:intron 45.0%
ACCACCACTACCTACCAATT+AGG - chr4_3:1062219-1062238 None:intergenic 45.0%
!! AATGGTGGTGTTGGTTTGCA+TGG + chr4_3:1062252-1062271 Msa0623750:intron 45.0%
! GGGGGTATGAGTAGTTGAAT+AGG - chr4_3:1062388-1062407 None:intergenic 45.0%
AACTCTAATGCCACTCCATG+TGG + chr4_3:1062724-1062743 Msa0623750:intron 45.0%
ACTGCATACAGGGATGGTAA+AGG + chr4_3:1062793-1062812 Msa0623750:intron 45.0%
CATACAGGGATGGTAAAGGA+TGG + chr4_3:1062797-1062816 Msa0623750:intron 45.0%
GATTCTCCATATCTTGGCCA+AGG + chr4_3:1063118-1063137 Msa0623750:CDS 45.0%
GCAGAAGGAAAACTAAGTGG+CGG + chr4_3:1063238-1063257 Msa0623750:intron 45.0%
GGGGAAGATCCCAATGAAAA+AGG - chr4_3:1063432-1063451 None:intergenic 45.0%
! TTTTCATTGGGATCTTCCCC+AGG + chr4_3:1063432-1063451 Msa0623750:CDS 45.0%
TACTCATCTTGTAAGGCCTG+GGG - chr4_3:1063451-1063470 None:intergenic 45.0%
CATACTCATCTTGTAAGGCC+TGG - chr4_3:1063453-1063472 None:intergenic 45.0%
CAGGCCTTACAAGATGAGTA+TGG + chr4_3:1063451-1063470 Msa0623750:CDS 45.0%
GCCTTACAAGATGAGTATGG+AGG + chr4_3:1063454-1063473 Msa0623750:CDS 45.0%
GCCTCCATACTCATCTTGTA+AGG - chr4_3:1063458-1063477 None:intergenic 45.0%
! AGCAAGAAGTTGGTTGTGTG+TGG - chr4_3:1064089-1064108 None:intergenic 45.0%
GACGCCCTTGATTTCATGTT+TGG + chr4_3:1064235-1064254 Msa0623750:CDS 45.0%
GACCGTTTCTACAACAACCA+TGG + chr4_3:1064279-1064298 Msa0623750:intron 45.0%
! CCCAATTTTGTCGTGATCCA+TGG - chr4_3:1064299-1064318 None:intergenic 45.0%
!! AGGAAAGTATCCAGCAAGCT+TGG + chr4_3:1064376-1064395 Msa0623750:CDS 45.0%
ACATAAGACACCAAGCTTGC+TGG - chr4_3:1064389-1064408 None:intergenic 45.0%
! GCAGTGAACGTTGGTAAATC+TGG - chr4_3:1064413-1064432 None:intergenic 45.0%
ATGGGACATACATTGGAGCA+TGG + chr4_3:1064727-1064746 Msa0623750:CDS 45.0%
TGGGACATACATTGGAGCAT+GGG + chr4_3:1064728-1064747 Msa0623750:CDS 45.0%
AATATGTGCAGGCTGCAACT+TGG + chr4_3:1064810-1064829 Msa0623750:intron 45.0%
TGTTTGTCCAAAGGGGATTC+GGG + chr4_3:1064838-1064857 Msa0623750:CDS 45.0%
GGACCTACTGTTGTACACAA+AGG + chr4_3:1064859-1064878 Msa0623750:CDS 45.0%
TCCTACACTATCACTCGAAG+AGG + chr4_3:1065159-1065178 Msa0623750:CDS 45.0%
! CGAGATACATGGGGTGATTT+TGG - chr4_3:1065765-1065784 None:intergenic 45.0%
GTGTGTTTGTCGCATTTGTG+TGG + chr4_3:1065876-1065895 Msa0623750:three_prime_UTR 45.0%
! TTGCCTTTCTTGTTTCGCTC+AGG + chr4_3:1065905-1065924 Msa0623750:three_prime_UTR 45.0%
AGACCTGAGCGAAACAAGAA+AGG - chr4_3:1065911-1065930 None:intergenic 45.0%
! TTCTTGTTTCGCTCAGGTCT+TGG + chr4_3:1065911-1065930 Msa0623750:three_prime_UTR 45.0%
!!! AAAATTATTTGATTTATTTA+AGG - chr4_3:1062937-1062956 None:intergenic 5.0%
! TCATTGTTTGGGACTGCCGT+GGG - chr4_3:1056553-1056572 None:intergenic 50.0%
TCCGTGTGGTGCACATGATA+AGG + chr4_3:1057246-1057265 Msa0623750:intron 50.0%
AAAGGAGAGAGCTGAGAGAG+GGG - chr4_3:1058195-1058214 None:intergenic 50.0%
CAAAAGGAGAGAGCTGAGAG+AGG - chr4_3:1058197-1058216 None:intergenic 50.0%
! CTCTTTCTCTTTGAAGGGGG+TGG - chr4_3:1059021-1059040 None:intergenic 50.0%
TCGTCAAGTACGGTGCAATC+AGG + chr4_3:1059057-1059076 Msa0623750:CDS 50.0%
TCACTCATAAGAGGAGGGGT+GGG - chr4_3:1059681-1059700 None:intergenic 50.0%
TTCACTCATAAGAGGAGGGG+TGG - chr4_3:1059682-1059701 None:intergenic 50.0%
CCCCTCCTCTTATGAGTGAA+TGG + chr4_3:1059682-1059701 Msa0623750:intron 50.0%
GCAGACGAAGGGAGTTTCTT+GGG + chr4_3:1059704-1059723 Msa0623750:intron 50.0%
CAGACGAAGGGAGTTTCTTG+GGG + chr4_3:1059705-1059724 Msa0623750:intron 50.0%
AGACGAAGGGAGTTTCTTGG+GGG + chr4_3:1059706-1059725 Msa0623750:intron 50.0%
TGAAACTGGACATCCCGACT+AGG - chr4_3:1059738-1059757 None:intergenic 50.0%
GTGATTATGTCCTTAGCCCC+AGG + chr4_3:1059782-1059801 Msa0623750:intron 50.0%
GATTATGTCCTTAGCCCCAG+GGG + chr4_3:1059784-1059803 Msa0623750:intron 50.0%
GGCGTAGCCCTTCATATACA+AGG + chr4_3:1059805-1059824 Msa0623750:intron 50.0%
TCGACAACCCCATTCTATCG+AGG + chr4_3:1060625-1060644 Msa0623750:intron 50.0%
! AATCGGAGCAGTTTTCCGGA+AGG + chr4_3:1061026-1061045 Msa0623750:CDS 50.0%
!! TACTGGCTCCTCCAATTACC+AGG + chr4_3:1061061-1061080 Msa0623750:CDS 50.0%
GTGTTGTACCTCCTCTTACG+AGG - chr4_3:1061563-1061582 None:intergenic 50.0%
ACACCACCATTGAACCACCT+GGG - chr4_3:1062243-1062262 None:intergenic 50.0%
AACACCACCATTGAACCACC+TGG - chr4_3:1062244-1062263 None:intergenic 50.0%
! AGGTGGTTCAATGGTGGTGT+TGG + chr4_3:1062243-1062262 Msa0623750:intron 50.0%
! GTGTGATTTGGACAGTGTCG+TGG + chr4_3:1062296-1062315 Msa0623750:intron 50.0%
! TGATTTGGACAGTGTCGTGG+TGG + chr4_3:1062299-1062318 Msa0623750:intron 50.0%
ATGCCACTCCATGTGGCTAA+TGG + chr4_3:1062731-1062750 Msa0623750:intron 50.0%
TGCCACTCCATGTGGCTAAT+GGG + chr4_3:1062732-1062751 Msa0623750:intron 50.0%
GATTCCACCCATTAGCCACA+TGG - chr4_3:1062742-1062761 None:intergenic 50.0%
CAGCTGCATGAGCAAGAAGT+TGG - chr4_3:1064099-1064118 None:intergenic 50.0%
GATTGCTCTGCAGTGAACGT+TGG - chr4_3:1064422-1064441 None:intergenic 50.0%
! TGCATTGGCAGCATACATGC+TGG - chr4_3:1064492-1064511 None:intergenic 50.0%
CCTATACAGTCTGGATCAGG+CGG + chr4_3:1064524-1064543 Msa0623750:CDS 50.0%
! GCCTCTTCGAGTGATAGTGT+AGG - chr4_3:1065163-1065182 None:intergenic 50.0%
! GACGGATACACTGTGCGTTT+TGG + chr4_3:1065427-1065446 Msa0623750:CDS 50.0%
! CTCATTGTTTGGGACTGCCG+TGG - chr4_3:1056554-1056573 None:intergenic 55.0%
CACGGCAGTCCCAAACAATG+AGG + chr4_3:1056552-1056571 Msa0623750:exon 55.0%
GGGGAAAGGTCATGGTTGTG+TGG + chr4_3:1059392-1059411 Msa0623750:intron 55.0%
ACTCATAAGAGGAGGGGTGG+GGG - chr4_3:1059679-1059698 None:intergenic 55.0%
CACTCATAAGAGGAGGGGTG+GGG - chr4_3:1059680-1059699 None:intergenic 55.0%
GGCAGACGAAGGGAGTTTCT+TGG + chr4_3:1059703-1059722 Msa0623750:intron 55.0%
ACTGGACATCCCGACTAGGT+CGG - chr4_3:1059734-1059753 None:intergenic 55.0%
ATATGAAGGGCTACGCCCCT+GGG - chr4_3:1059802-1059821 None:intergenic 55.0%
TATATGAAGGGCTACGCCCC+TGG - chr4_3:1059803-1059822 None:intergenic 55.0%
GTGGTTCCCAGGTGGTTCAA+TGG + chr4_3:1062234-1062253 Msa0623750:intron 55.0%
GTTCCCAGGTGGTTCAATGG+TGG + chr4_3:1062237-1062256 Msa0623750:intron 55.0%
!! GGTGGTGTTGGTTTGCATGG+TGG + chr4_3:1062255-1062274 Msa0623750:intron 55.0%
! CAGTGTCGTGGTGGAAACTC+TGG + chr4_3:1062308-1062327 Msa0623750:intron 55.0%
CACCCATTAGCCACATGGAG+TGG - chr4_3:1062737-1062756 None:intergenic 55.0%
CACTCCATGTGGCTAATGGG+TGG + chr4_3:1062735-1062754 Msa0623750:intron 55.0%
GGTGCAACTGCATACAGGGA+TGG + chr4_3:1062787-1062806 Msa0623750:intron 55.0%
AGTGGCGGTGTAAACCAAGC+AGG + chr4_3:1063253-1063272 Msa0623750:CDS 55.0%
! GAAGTTGGTTGTGTGTGGCC+TGG - chr4_3:1064084-1064103 None:intergenic 55.0%
CCGCCTGATCCAGACTGTAT+AGG - chr4_3:1064527-1064546 None:intergenic 55.0%
AGTAGGTCCCGAATCCCCTT+TGG - chr4_3:1064848-1064867 None:intergenic 55.0%
!! ATCACTCGAAGAGGCGCTCA+TGG + chr4_3:1065168-1065187 Msa0623750:CDS 55.0%
TATGAAGGGCTACGCCCCTG+GGG - chr4_3:1059801-1059820 None:intergenic 60.0%
! GGTAGGTAGTGGTGGTTCCC+AGG + chr4_3:1062223-1062242 Msa0623750:intron 60.0%
! AGGTAGTGGTGGTTCCCAGG+TGG + chr4_3:1062226-1062245 Msa0623750:intron 60.0%
GACACCCTAAGCTCTCTGCC+CGG + chr4_3:1065485-1065504 Msa0623750:CDS 60.0%
ACCACCGGGCAGAGAGCTTA+GGG - chr4_3:1065492-1065511 None:intergenic 60.0%
AACCACCGGGCAGAGAGCTT+AGG - chr4_3:1065493-1065512 None:intergenic 60.0%
AGCTCTCTGCCCGGTGGTTT+AGG + chr4_3:1065494-1065513 Msa0623750:CDS 60.0%
CGTCCTCCACGTTGCAGATC+TGG + chr4_3:1065992-1066011 Msa0623750:three_prime_UTR 60.0%
CATAAGAGGAGGGGTGGGGG+TGG - chr4_3:1059676-1059695 None:intergenic 65.0%
!! CTTGGGGGTGCCGACCTAGT+CGG + chr4_3:1059721-1059740 Msa0623750:intron 65.0%
!! TTGGGGGTGCCGACCTAGTC+GGG + chr4_3:1059722-1059741 Msa0623750:intron 65.0%
! TCTGGATCAGGCGGCGCTGA+CGG + chr4_3:1064533-1064552 Msa0623750:CDS 65.0%
ACCCTAAGCTCTCTGCCCGG+TGG + chr4_3:1065488-1065507 Msa0623750:CDS 65.0%
GGGCTACGCCCCTGGGGCTA+AGG - chr4_3:1059795-1059814 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 1056486 1066015 1056486 ID=Msa0623750;Name=Msa0623750
chr4_3 mRNA 1056486 1066015 1056486 ID=Msa0623750-mRNA-1;Parent=Msa0623750;Name=Msa0623750-mRNA-1;_AED=0.13;_eAED=0.13;_QI=83|1|1|1|0.84|0.85|14|466|504
chr4_3 exon 1056486 1056585 1056486 ID=Msa0623750-mRNA-1:exon:307;Parent=Msa0623750-mRNA-1
chr4_3 exon 1059017 1059078 1059017 ID=Msa0623750-mRNA-1:exon:308;Parent=Msa0623750-mRNA-1
chr4_3 exon 1060979 1061082 1060979 ID=Msa0623750-mRNA-1:exon:309;Parent=Msa0623750-mRNA-1
chr4_3 exon 1062038 1062104 1062038 ID=Msa0623750-mRNA-1:exon:310;Parent=Msa0623750-mRNA-1
chr4_3 exon 1062804 1062862 1062804 ID=Msa0623750-mRNA-1:exon:311;Parent=Msa0623750-mRNA-1
chr4_3 exon 1063075 1063150 1063075 ID=Msa0623750-mRNA-1:exon:312;Parent=Msa0623750-mRNA-1
chr4_3 exon 1063242 1063319 1063242 ID=Msa0623750-mRNA-1:exon:313;Parent=Msa0623750-mRNA-1
chr4_3 exon 1063410 1063497 1063410 ID=Msa0623750-mRNA-1:exon:314;Parent=Msa0623750-mRNA-1
chr4_3 exon 1063967 1064260 1063967 ID=Msa0623750-mRNA-1:exon:315;Parent=Msa0623750-mRNA-1
chr4_3 exon 1064355 1064596 1064355 ID=Msa0623750-mRNA-1:exon:316;Parent=Msa0623750-mRNA-1
chr4_3 exon 1064715 1064749 1064715 ID=Msa0623750-mRNA-1:exon:317;Parent=Msa0623750-mRNA-1
chr4_3 exon 1064821 1064920 1064821 ID=Msa0623750-mRNA-1:exon:318;Parent=Msa0623750-mRNA-1
chr4_3 exon 1065140 1065248 1065140 ID=Msa0623750-mRNA-1:exon:319;Parent=Msa0623750-mRNA-1
chr4_3 exon 1065366 1066015 1065366 ID=Msa0623750-mRNA-1:exon:320;Parent=Msa0623750-mRNA-1
chr4_3 five_prime_UTR 1056486 1056568 1056486 ID=Msa0623750-mRNA-1:five_prime_utr;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1056569 1056585 1056569 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1059017 1059078 1059017 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1060979 1061082 1060979 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1062038 1062104 1062038 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1062804 1062862 1062804 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1063075 1063150 1063075 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1063242 1063319 1063242 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1063410 1063497 1063410 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1063967 1064260 1063967 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1064355 1064596 1064355 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1064715 1064749 1064715 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1064821 1064920 1064821 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1065140 1065248 1065140 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 CDS 1065366 1065549 1065366 ID=Msa0623750-mRNA-1:cds;Parent=Msa0623750-mRNA-1
chr4_3 three_prime_UTR 1065550 1066015 1065550 ID=Msa0623750-mRNA-1:three_prime_utr;Parent=Msa0623750-mRNA-1
Gene Sequence

>Msa0623750

ATGAGGAATGTGATCAGACCACCCCCTTCAAAGAGAAAGAGACCACATTCGGAAATATCGTCAAGTACGGTGCAATCAGGGGCGGAACCTGTTATTGCCTCTATTTATGCTGACAGTTTTGAGCTAAATCGGAGCAGTTTTCCGGAAGGTTTTGTTTTTGGTACTGGCTCCTCCAATTACCAGTATGAAGGTGCTGTAAGTGAAGATGGAAGAGGAAAGGGTACATGGGATATATTTGCCCATACACCAGGGATGGTAAAGGATGGAAAGAATGCAGATGTAGCTATTGATCACTATCATCGTTATAAGGAAGATGTTCAAATCATGAAGAATATGAATACAGATGCATACAGATTCTCCATATCTTGGCCAAGGATATTGCCAAAAGGAAAACTAAGTGGCGGTGTAAACCAAGCAGGAATCATATTTTACAACAACCTGATCAATGAGCTACTTGCTAATGGTCAAATACCATATGTGACCCTTTTTCATTGGGATCTTCCCCAGGCCTTACAAGATGAGTATGGAGGCTTTGTCAGCACGAATATTTTAGATGATTTTAAGGACTTCGTGGATATATGCTTCAAGGAATTTGGAGACAGAGTAAAGCATTGGGTTACTTTTAATGAGCCATTCTCTTACACTTTGAATACATCAGATTGGTACCAGGCCACACACAACCAACTTCTTGCTCATGCAGCTGTTTTCGAATTGTATAAAACCACATATCAGGCTCAAAATGGTATAATAGGCATTGGATTAAACTCTCACTGGTTTAAACCATACTCAACTGACCCATTAGATCTAAAAGCTGCTGAAGACGCCCTTGATTTCATGTTTGGATGGTTTATACAGCCGCTAACAACAGGAAAGTATCCAGCAAGCTTGGTGTCTTATGTGCCAGATTTACCAACGTTCACTGCAGAGCAATCTAAGAGTCTTATTGGGTCATATGATTTTATTGGAATCAATTACTACACCAGCATGTATGCTGCCAATGCAACGAAACCAATTCCTATACAGTCTGGATCAGGCGGCGCTGACGGTGTCAATAGTGTTTTCAATACTGTTAATGTGACTTTAACAGATAAGAATAAAGATGGGACATACATTGGAGCATGGGCTGCAACTTGGCTATATGTTTGTCCAAAGGGGATTCGGGACCTACTGTTGTACACAAAGGAAAAGTATAACAATCCTACGATTATCATAACAGAAAATGGTATGAATGAAGTCAATGATCCTACACTATCACTCGAAGAGGCGCTCATGGATACTAACAGAATTGATTACTTTTATCGTCATCTATATTATCTTTTATCTGCAATGAGGCAAGGTGTGAATGTAAAAGGATACTTTGCATGGTCCCTTTTGGACAACTTTGAATGGAATGACGGATACACTGTGCGTTTTGGAATTAACTTTGTTGATTATGACAATGAACTTAGAAGACACCCTAAGCTCTCTGCCCGGTGGTTTAGGAAGTTTCTTGAACATAATAGAATTATTGGTTGA
Protein sequence

>Msa0623750

MRNVIRPPPSKRKRPHSEISSSTVQSGAEPVIASIYADSFELNRSSFPEGFVFGTGSSNYQYEGAVSEDGRGKGTWDIFAHTPGMVKDGKNADVAIDHYHRYKEDVQIMKNMNTDAYRFSISWPRILPKGKLSGGVNQAGIIFYNNLINELLANGQIPYVTLFHWDLPQALQDEYGGFVSTNILDDFKDFVDICFKEFGDRVKHWVTFNEPFSYTLNTSDWYQATHNQLLAHAAVFELYKTTYQAQNGIIGIGLNSHWFKPYSTDPLDLKAAEDALDFMFGWFIQPLTTGKYPASLVSYVPDLPTFTAEQSKSLIGSYDFIGINYYTSMYAANATKPIPIQSGSGGADGVNSVFNTVNVTLTDKNKDGTYIGAWAATWLYVCPKGIRDLLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQGVNVKGYFAWSLLDNFEWNDGYTVRFGINFVDYDNELRRHPKLSARWFRKFLEHNRIIG*