AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0667620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0667620 MtrunA17_Chr4g0006131 92.688 506 35 2 1 504 1 506 0.0 944
Msa0667620 MtrunA17_Chr4g0006111 80.498 482 91 2 20 498 43 524 0.0 805
Msa0667620 MtrunA17_Chr4g0033261 66.322 484 150 8 19 498 18 492 0.0 631
Msa0667620 MtrunA17_Chr4g0033231 63.900 482 161 9 21 498 20 492 0.0 617
Msa0667620 MtrunA17_Chr2g0329191 59.063 491 161 10 38 499 30 509 0.0 572
Msa0667620 MtrunA17_Chr2g0329201 57.746 497 171 8 32 499 21 507 0.0 568
Msa0667620 MtrunA17_Chr4g0033271 58.607 488 163 8 42 500 35 512 0.0 556
Msa0667620 MtrunA17_Chr4g0033191 57.290 487 169 9 41 498 42 518 0.0 553
Msa0667620 MtrunA17_Chr4g0033311 55.969 511 181 9 17 498 19 514 0.0 553
Msa0667620 MtrunA17_Chr4g0033201 56.033 489 176 7 41 500 35 513 0.0 552
Msa0667620 MtrunA17_Chr3g0088441 57.000 500 171 9 28 498 29 513 0.0 551
Msa0667620 MtrunA17_Chr4g0033321 57.938 485 165 8 42 497 33 507 0.0 547
Msa0667620 MtrunA17_Chr6g0482131 56.327 490 175 7 42 502 36 515 0.0 546
Msa0667620 MtrunA17_Chr4g0033401 57.732 485 166 8 42 497 34 508 0.0 546
Msa0667620 MtrunA17_Chr4g0033341 55.644 505 184 10 23 500 53 544 0.0 542
Msa0667620 MtrunA17_Chr6g0482071 55.489 501 182 9 33 502 26 516 0.0 534
Msa0667620 MtrunA17_Chr4g0033331 56.082 485 174 7 42 497 39 513 0.0 533
Msa0667620 MtrunA17_Chr2g0301231 66.076 395 125 3 109 498 1 391 0.0 520
Msa0667620 MtrunA17_Chr6g0482081 55.714 490 179 7 42 502 36 516 0.0 519
Msa0667620 MtrunA17_Chr2g0329321 53.427 496 166 10 32 498 28 487 3.94e-177 506
Msa0667620 MtrunA17_Chr4g0010501 50.704 497 200 9 31 498 13 493 4.39e-169 486
Msa0667620 MtrunA17_Chr5g0430451 49.237 524 179 10 20 499 18 498 2.15e-157 457
Msa0667620 MtrunA17_Chr4g0043091 47.143 490 217 7 39 498 25 502 1.45e-155 452
Msa0667620 MtrunA17_Chr3g0087261 48.317 505 215 9 23 497 19 507 3.12e-154 449
Msa0667620 MtrunA17_Chr3g0087271 48.200 500 216 10 26 497 24 508 8.87e-148 433
Msa0667620 MtrunA17_Chr4g0042171 43.487 499 237 8 32 498 14 499 1.60e-140 414
Msa0667620 MtrunA17_Chr3g0090111 44.118 476 235 7 41 498 18 480 2.94e-134 397
Msa0667620 MtrunA17_Chr4g0074561 43.776 482 229 11 47 497 40 510 8.34e-134 397
Msa0667620 MtrunA17_Chr3g0090131 43.487 476 239 8 41 498 20 483 9.78e-132 391
Msa0667620 MtrunA17_Chr2g0317841 43.093 485 236 10 41 497 31 503 2.20e-131 391
Msa0667620 MtrunA17_Chr4g0074551 44.286 490 236 8 39 501 47 526 2.50e-131 392
Msa0667620 MtrunA17_Chr2g0288021 41.870 492 246 10 42 504 35 515 5.58e-130 387
Msa0667620 MtrunA17_Chr2g0317821 42.680 485 238 10 41 497 31 503 1.15e-129 387
Msa0667620 MtrunA17_Chr2g0288071 42.570 498 248 9 32 501 57 544 1.96e-126 379
Msa0667620 MtrunA17_Chr6g0482941 42.315 501 241 12 31 501 32 514 7.27e-126 377
Msa0667620 MtrunA17_Chr6g0482951 40.763 498 253 10 31 501 32 514 5.04e-123 369
Msa0667620 MtrunA17_Chr7g0242691 37.795 508 267 8 20 499 9 495 1.78e-113 345
Msa0667620 MtrunA17_Chr7g0242681 40.286 489 240 9 39 498 35 500 2.01e-112 343
Msa0667620 MtrunA17_Chr7g0234131 40.462 519 254 16 9 497 39 532 4.80e-112 342
Msa0667620 MtrunA17_Chr4g0006971 40.373 483 237 8 44 497 29 489 8.06e-112 341
Msa0667620 MtrunA17_Chr1g0195611 38.934 488 245 9 43 501 28 491 4.83e-111 338
Msa0667620 MtrunA17_Chr5g0428831 38.934 488 246 9 43 501 28 492 8.44e-111 338
Msa0667620 MtrunA17_Chr7g0234091 39.020 510 269 10 9 497 43 531 2.73e-110 337
Msa0667620 MtrunA17_Chr7g0234111 39.300 514 266 11 10 500 44 534 3.07e-110 337
Msa0667620 MtrunA17_Chr3g0087201 46.064 343 142 8 185 499 17 344 3.08e-92 285
Msa0667620 MtrunA17_Chr5g0418871 47.059 306 132 5 61 338 2 305 1.83e-90 280
Msa0667620 MtrunA17_Chr1g0195641 38.832 394 195 7 44 409 29 404 1.09e-83 265
Msa0667620 MtrunA17_Chr7g0230651 38.874 373 182 7 88 436 18 368 6.93e-81 256
Msa0667620 MtrunA17_Chr3g0087191 62.500 152 56 1 34 184 14 165 1.23e-62 202
Msa0667620 MtrunA17_Chr7g0227561 38.225 293 131 7 16 285 18 283 1.33e-59 198
Msa0667620 MtrunA17_Chr7g0236731 44.196 224 103 5 130 331 28 251 2.00e-45 160
Msa0667620 MtrunA17_Chr4g0068871 27.700 426 209 13 105 502 183 537 2.95e-31 127
Msa0667620 MtrunA17_Chr5g0418861 51.111 90 43 1 409 497 1 90 5.15e-26 101
Msa0667620 MtrunA17_Chr8g0352881 42.697 89 50 1 246 333 62 150 5.04e-15 72.8
Msa0667620 MtrunA17_Chr2g0301221 71.795 39 11 0 47 85 70 108 1.26e-12 64.7
Msa0667620 MtrunA17_Chr7g0227591 46.429 56 30 0 445 500 13 68 8.41e-12 60.8
Msa0667620 MtrunA17_Chr1g0195651 51.852 54 25 1 449 501 1 54 8.46e-12 60.8
Msa0667620 MtrunA17_Chr7g0236741 37.931 58 36 0 445 502 10 67 8.72e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0667620 AT5G44640.1 47.705 501 217 9 31 501 20 505 1.26e-159 463
Msa0667620 AT2G44450.1 48.400 500 214 10 31 501 20 504 1.11e-158 461
Msa0667620 AT5G42260.1 47.667 493 213 9 31 493 20 497 4.19e-156 454
Msa0667620 AT3G60130.1 46.185 498 223 9 31 498 19 501 9.75e-151 441
Msa0667620 AT1G26560.1 47.433 487 215 9 41 497 31 506 1.27e-149 437
Msa0667620 AT2G44480.1 46.327 490 225 7 39 500 32 511 1.36e-147 433
Msa0667620 AT2G44480.3 46.327 490 225 7 39 500 63 542 4.65e-147 432
Msa0667620 AT2G25630.1 45.363 496 211 9 31 497 19 483 3.14e-145 426
Msa0667620 AT2G44490.1 44.082 490 233 8 44 501 16 496 1.03e-144 427
Msa0667620 AT5G24550.1 46.232 491 222 8 42 500 32 512 1.55e-143 423
Msa0667620 AT3G60120.1 44.821 502 225 9 34 499 6 491 1.96e-143 423
Msa0667620 AT5G54570.1 44.646 495 228 10 36 497 24 505 6.69e-143 421
Msa0667620 AT3G60140.1 45.951 494 222 10 38 498 22 503 8.52e-139 412
Msa0667620 AT5G24540.1 45.697 488 229 8 42 500 32 512 9.40e-139 411
Msa0667620 AT5G36890.2 44.421 475 234 7 43 498 17 480 3.45e-137 405
Msa0667620 AT5G36890.1 44.421 475 234 7 43 498 17 480 3.53e-137 405
Msa0667620 AT1G51470.1 45.155 485 225 10 38 497 41 509 6.21e-137 405
Msa0667620 AT1G47600.1 44.948 485 226 11 38 497 41 509 1.44e-135 402
Msa0667620 AT1G47600.2 44.948 485 225 12 38 497 41 508 3.06e-134 398
Msa0667620 AT3G18080.1 43.967 489 227 10 42 500 39 510 3.40e-134 398
Msa0667620 AT3G03640.1 42.969 512 245 9 19 498 17 513 1.67e-133 397
Msa0667620 AT2G44460.1 44.758 496 236 7 32 498 19 505 2.67e-131 393
Msa0667620 AT3G18070.3 42.857 511 236 13 22 501 9 494 9.17e-131 389
Msa0667620 AT3G18070.1 43.053 511 241 13 22 501 9 500 1.85e-130 388
Msa0667620 AT3G09260.1 42.245 490 245 6 39 499 32 512 7.27e-130 388
Msa0667620 AT1G75940.1 41.633 502 251 8 31 497 23 517 2.76e-129 387
Msa0667620 AT1G66280.1 43.532 487 234 8 41 497 35 510 3.98e-128 383
Msa0667620 AT2G44470.3 41.600 500 249 9 30 497 17 505 1.47e-127 384
Msa0667620 AT1G66270.1 43.117 494 226 10 41 497 35 510 1.73e-127 382
Msa0667620 AT3G60130.2 46.118 425 185 8 103 498 40 449 3.44e-127 379
Msa0667620 AT2G32860.2 40.476 504 258 10 32 503 84 577 1.20e-126 382
Msa0667620 AT2G32860.1 39.882 509 253 12 32 503 84 576 4.39e-126 381
Msa0667620 AT1G61820.1 40.909 506 259 11 24 500 13 507 1.22e-125 377
Msa0667620 AT1G66270.2 42.915 494 225 11 41 497 35 508 3.12e-125 376
Msa0667620 AT1G52400.3 41.317 501 249 10 30 498 29 516 9.60e-125 375
Msa0667620 AT1G52400.1 41.317 501 249 10 30 498 29 516 9.60e-125 375
Msa0667620 AT3G21370.1 41.955 491 240 11 42 498 33 512 9.93e-124 372
Msa0667620 AT2G44480.2 45.585 419 191 6 109 500 1 409 1.77e-123 367
Msa0667620 AT3G60130.3 45.283 424 179 8 103 498 40 438 8.66e-123 367
Msa0667620 AT5G28510.1 40.688 494 248 8 39 497 36 519 1.61e-122 369
Msa0667620 AT4G21760.2 41.529 484 241 11 47 503 59 527 5.43e-122 368
Msa0667620 AT5G25980.2 40.583 515 256 13 14 498 29 523 1.35e-120 365
Msa0667620 AT5G26000.1 42.094 487 238 10 42 497 38 511 7.93e-120 362
Msa0667620 AT4G21760.1 40.994 483 235 11 47 503 59 517 5.67e-119 360
Msa0667620 AT5G54570.3 42.177 441 210 9 36 444 24 451 1.07e-116 351
Msa0667620 AT5G54570.2 44.418 421 189 9 109 497 1 408 5.34e-116 349
Msa0667620 AT1G61810.1 39.754 488 255 9 42 500 33 510 6.76e-115 349
Msa0667620 AT1G02850.2 40.286 489 238 9 39 498 23 486 2.15e-113 345
Msa0667620 AT4G27830.1 39.192 495 251 10 31 497 12 484 1.26e-112 343
Msa0667620 AT5G24540.2 43.488 430 208 7 42 443 32 454 2.20e-111 338
Msa0667620 AT3G62750.1 38.477 486 254 11 31 497 14 473 3.68e-111 339
Msa0667620 AT3G62750.2 38.477 486 254 11 31 497 40 499 1.24e-110 338
Msa0667620 AT1G02850.5 38.477 512 238 9 39 498 23 509 6.57e-110 336
Msa0667620 AT1G61810.3 40.645 465 238 9 42 477 33 488 3.53e-109 335
Msa0667620 AT1G02850.4 38.402 513 238 10 39 498 23 510 4.31e-108 332
Msa0667620 AT4G27820.1 38.540 493 249 11 33 497 16 482 1.73e-107 330
Msa0667620 AT1G02850.1 39.344 488 217 9 39 498 23 459 5.97e-107 327
Msa0667620 AT3G60140.2 45.500 400 180 9 38 408 22 412 6.50e-105 321
Msa0667620 AT4G22100.1 38.969 485 247 11 43 500 23 485 2.76e-104 322
Msa0667620 AT2G44470.1 40.000 445 225 8 30 443 17 450 5.94e-104 318
Msa0667620 AT2G44450.2 46.196 368 155 9 162 501 1 353 1.54e-103 314
Msa0667620 AT3G62740.1 36.437 494 258 12 31 497 14 478 1.06e-101 315
Msa0667620 AT5G25980.3 39.216 459 231 11 14 444 29 467 3.08e-101 312
Msa0667620 AT5G25980.1 39.216 459 231 11 14 444 29 467 3.08e-101 312
Msa0667620 AT1G60090.2 37.810 484 250 11 42 498 24 483 7.04e-100 310
Msa0667620 AT1G45191.4 37.888 483 245 9 43 498 30 484 2.39e-99 308
Msa0667620 AT1G52400.2 39.775 445 224 9 30 443 29 460 2.46e-99 307
Msa0667620 AT5G26000.2 40.509 432 215 8 42 444 38 456 4.22e-99 306
Msa0667620 AT1G45191.6 37.681 483 257 9 43 498 30 495 1.47e-97 304
Msa0667620 AT1G45191.2 37.681 483 252 10 43 498 30 490 1.56e-97 304
Msa0667620 AT1G60090.1 37.143 490 252 12 42 498 24 490 2.53e-97 303
Msa0667620 AT1G45191.1 37.475 491 259 10 43 498 30 507 3.11e-96 301
Msa0667620 AT3G62750.4 37.327 434 228 10 31 446 40 447 2.37e-93 291
Msa0667620 AT2G44480.4 49.502 301 125 5 39 312 63 363 9.18e-92 285
Msa0667620 AT2G44470.2 43.976 332 158 5 30 333 17 348 1.05e-91 285
Msa0667620 AT5G48375.1 38.851 435 193 12 41 462 37 411 3.15e-88 278
Msa0667620 AT1G61810.5 38.333 420 221 8 109 500 1 410 5.40e-88 276
Msa0667620 AT4G27830.2 37.650 417 211 9 109 497 1 396 3.37e-87 275
Msa0667620 AT3G62740.2 36.574 432 219 11 31 436 14 416 1.56e-86 273
Msa0667620 AT3G62750.7 42.769 325 160 7 31 337 14 330 4.56e-86 270
Msa0667620 AT3G62750.8 42.769 325 160 7 31 337 14 330 4.56e-86 270
Msa0667620 AT3G18070.4 43.068 339 162 7 22 333 9 343 5.61e-86 270
Msa0667620 AT1G02850.3 38.242 421 190 7 39 408 23 424 1.98e-85 270
Msa0667620 AT3G62750.3 42.769 325 160 7 31 337 40 356 1.05e-84 268
Msa0667620 AT3G62750.6 36.520 408 220 9 109 497 1 388 1.07e-83 265
Msa0667620 AT3G62750.5 36.520 408 220 9 109 497 1 388 1.07e-83 265
Msa0667620 AT1G61810.4 37.879 396 208 8 42 408 33 419 1.94e-83 265
Msa0667620 AT4G27820.2 36.691 417 216 9 109 497 1 397 3.33e-82 261
Msa0667620 AT4G27820.3 36.691 417 216 9 109 497 1 397 3.33e-82 261
Msa0667620 AT1G61820.3 38.770 374 192 8 155 500 4 368 2.30e-80 255
Msa0667620 AT2G44460.2 42.391 368 174 7 160 498 1 359 2.64e-80 257
Msa0667620 AT1G60270.1 41.641 329 160 6 42 344 24 346 2.84e-76 245
Msa0667620 AT1G45191.5 41.325 317 154 5 43 333 30 340 3.31e-75 243
Msa0667620 AT1G45191.3 41.325 317 154 5 43 333 30 340 4.14e-75 243
Msa0667620 AT3G18070.2 40.580 345 160 10 187 501 94 423 2.89e-70 231
Msa0667620 AT3G18070.2 46.988 83 43 1 22 103 9 91 6.23e-17 83.6
Msa0667620 AT2G44480.5 41.489 282 152 4 222 500 34 305 3.94e-69 224
Msa0667620 AT1G51490.1 39.466 337 173 7 49 361 27 356 1.60e-68 226
Msa0667620 AT3G18070.7 43.007 286 142 8 222 501 41 311 3.66e-65 214
Msa0667620 AT1G61810.2 40.892 269 132 4 42 284 33 300 5.34e-65 213
Msa0667620 AT1G60270.2 38.434 281 136 7 109 362 1 271 8.30e-51 175
Msa0667620 AT3G18070.5 37.008 254 118 8 187 410 94 335 7.85e-38 142
Msa0667620 AT3G18070.5 46.988 83 43 1 22 103 9 91 4.55e-17 83.2
Msa0667620 AT5G16580.1 33.219 292 152 10 187 454 27 299 5.29e-35 133
Msa0667620 AT3G06510.2 25.917 436 240 11 104 502 159 548 6.86e-33 133
Msa0667620 AT3G18070.6 39.487 195 100 6 222 410 41 223 7.93e-33 125
Msa0667620 AT3G06510.1 25.995 427 217 12 104 502 159 514 1.04e-30 126

Find 137 sgRNAs with CRISPR-Local

Find 615 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGATACATGGGGTGATTT+TGG 0.137457 4_4:+8094396 None:intergenic
CTTGAACATAATAGAATTAT+TGG 0.142938 4_4:-8094635 Msa0667620:CDS
GATATATGCTTCAAGGAATT+TGG 0.182257 4_4:-8096170 Msa0667620:CDS
GAGCAATCTAAGAGTCTTAT+TGG 0.231240 4_4:-8095725 Msa0667620:CDS
ACTGTTAATGTGACTTTAAC+AGG 0.248704 4_4:-8095584 Msa0667620:intron
GGGGAAGATCCCAATGAAAA+AGG 0.264707 4_4:+8097021 None:intergenic
CAGGCTCAAAATGGTATAAT+AGG 0.277472 4_4:-8096014 Msa0667620:CDS
ACGATTATCATAACAGAAAA+TGG 0.280720 4_4:-8095258 Msa0667620:intron
CAAAGCTCACACAGTATTAT+TGG 0.283200 4_4:+8094590 None:intergenic
CTTGTTTAAGTGCATGTATT+CGG 0.290606 4_4:+8104005 None:intergenic
ATACTTTGCATGGTCCCTTT+TGG 0.290939 4_4:-8094771 Msa0667620:CDS
TGATCACATTCCTCATTGTT+TGG 0.292631 4_4:+8103929 None:intergenic
TGTTTGTCCAAAGGGGATTC+AGG 0.305206 4_4:-8095319 Msa0667620:CDS
TACAAAACGTACCTGGTAAT+TGG 0.306037 4_4:+8099227 None:intergenic
AGCTCTCTGCCCGGTGGTTT+AGG 0.309537 4_4:-8094664 Msa0667620:CDS
GACGGATACACTGTGCGTTT+TGG 0.311280 4_4:-8094731 Msa0667620:CDS
CGTCCTCCACGTTGCAGATC+TGG 0.314713 4_4:-8094166 Msa0667620:three_prime_UTR
CAATAAAGAGGGGTGATTTA+AGG 0.315275 4_4:-8094431 Msa0667620:three_prime_UTR
GACGCCCTTGATTTCATGTT+TGG 0.322541 4_4:-8095924 Msa0667620:CDS
TGTGGTCTCTTTCTCTTTGA+AGG 0.337983 4_4:+8101251 None:intergenic
ACCACATATCAGGCTCAAAA+TGG 0.345183 4_4:-8096023 Msa0667620:CDS
TTCTTGTTTCGCTCAGGTCT+TGG 0.348865 4_4:-8094247 Msa0667620:three_prime_UTR
TCTAATGGGTCAGTTGAGTA+TGG 0.349718 4_4:+8095963 None:intergenic
CATGAAATCAAGGGCGTCTT+CGG 0.355937 4_4:+8095929 None:intergenic
GATCACATTCCTCATTGTTT+GGG 0.362382 4_4:+8103930 None:intergenic
GCAGTGAACGTTGGTAAATC+TGG 0.366493 4_4:+8095749 None:intergenic
ACATAAGACACCAAGCTTAC+TGG 0.377777 4_4:+8095773 None:intergenic
TGATCACTATCATCGTTATA+AGG 0.379609 4_4:-8097609 Msa0667620:intron
TTGTTTAAGTGCATGTATTC+GGG 0.382758 4_4:+8104006 None:intergenic
CAATATCCTTGGCCAAGATA+TGG 0.382965 4_4:+8097326 None:intergenic
GATCCAGACTGTATAGGAAT+TGG 0.386737 4_4:+8095641 None:intergenic
AGGCAAGGTGTGAATGTAAA+AGG 0.387936 4_4:-8094794 Msa0667620:CDS
CTATTACTTGGCAATATCCT+TGG 0.390771 4_4:+8097315 None:intergenic
CATGAAGACGGAAGAGGAAT+TGG 0.391004 4_4:-8098398 Msa0667620:CDS
TCCATTCAAAGTTGTCCAAA+AGG 0.405927 4_4:+8094756 None:intergenic
TGGCTATATGTTTGTCCAAA+GGG 0.410402 4_4:-8095327 Msa0667620:CDS
CAATAATACTGTGTGAGCTT+TGG 0.410863 4_4:-8094589 Msa0667620:three_prime_UTR
CATACAGATTCTCCATATCT+TGG 0.418726 4_4:-8097338 Msa0667620:CDS
GTGGTCTCTTTCTCTTTGAA+GGG 0.424614 4_4:+8101252 None:intergenic
TTTATACAGCCGCTAACAAC+AGG 0.426920 4_4:-8095803 Msa0667620:CDS
ATACTCATCTTGTAAGGCCT+GGG 0.427696 4_4:+8097001 None:intergenic
ATCAATGAGCTACTTGCTAA+TGG 0.429019 4_4:-8097152 Msa0667620:intron
TTCATTGATTGAATCTGCAT+TGG 0.431690 4_4:+8094194 None:intergenic
CAGGCCTTACAAGATGAGTA+TGG 0.435383 4_4:-8096999 Msa0667620:CDS
GCATAAATAGAGGCAATAAC+AGG 0.437739 4_4:+8099312 None:intergenic
ATTGTATAAAACCACATATC+AGG 0.437772 4_4:-8096033 Msa0667620:CDS
AACCACCGGGCAGAGAGCTT+AGG 0.450563 4_4:+8094668 None:intergenic
TTGCCTTTCTTGTTTCGCTC+AGG 0.451091 4_4:-8094253 Msa0667620:three_prime_UTR
CATACTCATCTTGTAAGGCC+TGG 0.455210 4_4:+8097000 None:intergenic
CTTCTTCTTCATCAATAAAG+AGG 0.457465 4_4:-8094443 Msa0667620:three_prime_UTR
ATGACAGATAAGAATAAAGA+TGG 0.458312 4_4:-8095451 Msa0667620:intron
CCGCCTGATCCAGACTGTAT+AGG 0.458956 4_4:+8095635 None:intergenic
TAGCAAGTAGCTCATTGATC+AGG 0.461889 4_4:+8097156 None:intergenic
ACACTTTGAATACATCAGAT+TGG 0.462336 4_4:-8096103 Msa0667620:CDS
CTCATTGTTTGGGACTGCCG+TGG 0.464701 4_4:+8103940 None:intergenic
ACCATCCAAACATGAAATCA+AGG 0.473106 4_4:+8095919 None:intergenic
CTTCGTGGATATATGCTTCA+AGG 0.473903 4_4:-8096177 Msa0667620:CDS
ACCACCGGGCAGAGAGCTTA+GGG 0.475465 4_4:+8094669 None:intergenic
ATCACTCGAAGAGGCGCTCA+TGG 0.478154 4_4:-8094989 Msa0667620:CDS
TCGTCAAGTACGGTGCAATC+AGG 0.479472 4_4:-8101218 Msa0667620:intron
TTGGAGACAGAGTAAAGCAT+TGG 0.480355 4_4:-8096151 Msa0667620:CDS
AATAAAGATGGGACATACAT+TGG 0.483048 4_4:-8095439 Msa0667620:CDS
ATTCCTATACAGTCTGGATC+AGG 0.483543 4_4:-8095638 Msa0667620:CDS
AGTAGGTCCTGAATCCCCTT+TGG 0.484753 4_4:+8095312 None:intergenic
CAAAATGGTATAATAGGCAT+TGG 0.486147 4_4:-8096008 Msa0667620:CDS
AAAATATATACCTGGTGTAT+GGG 0.489236 4_4:+8098358 None:intergenic
GCATTGGATTAAACTCTCAC+TGG 0.490284 4_4:-8095992 Msa0667620:CDS
AGCAATCTAAGAGTCTTATT+GGG 0.490733 4_4:-8095724 Msa0667620:CDS
AAACAATGAGGAATGTGATC+AGG 0.493545 4_4:-8103927 Msa0667620:intron
GCCTCCATACTCATCTTGTA+AGG 0.497866 4_4:+8096995 None:intergenic
GGATACTTTCCTGTTGTTAG+CGG 0.499196 4_4:+8095794 None:intergenic
CCATTCAAAGTTGTCCAAAA+GGG 0.499789 4_4:+8094757 None:intergenic
TTCTTCTTCATCAATAAAGA+GGG 0.501801 4_4:-8094442 Msa0667620:three_prime_UTR
CCCTTGATTTCATGTTTGGA+TGG 0.504970 4_4:-8095920 Msa0667620:intron
TGGAGACAGAGTAAAGCATT+GGG 0.508305 4_4:-8096150 Msa0667620:CDS
TCTGGATCAGGCGGCGCTGA+CGG 0.508743 4_4:-8095626 Msa0667620:CDS
CAGCTGCATGAGCAAGAAGT+TGG 0.509222 4_4:+8096063 None:intergenic
AGGAATTGGTTTCGTTGCAT+TGG 0.510612 4_4:+8095655 None:intergenic
AAACCAATTCCTATACAGTC+TGG 0.511299 4_4:-8095644 Msa0667620:CDS
AAAGAGAAAGAGACCACATT+CGG 0.513482 4_4:-8101246 Msa0667620:CDS
AAAACTGTCAGCATAAATAG+AGG 0.520509 4_4:+8099302 None:intergenic
ATATCTATGAAATATAACTA+AGG 0.524017 4_4:+8103964 None:intergenic
GACAACTTTGAATGGAATGA+CGG 0.527539 4_4:-8094749 Msa0667620:CDS
TGGTCTCTTTCTCTTTGAAG+GGG 0.531186 4_4:+8101253 None:intergenic
AGACCTGAGCGAAACAAGAA+AGG 0.536233 4_4:+8094250 None:intergenic
TACTGGCTCCTCCAATTACC+AGG 0.536244 4_4:-8099238 Msa0667620:intron
ACGGAAGAGGAATTGGTACA+TGG 0.537410 4_4:-8098391 Msa0667620:CDS
GAAGTTGGTTGTGTGTGGCC+TGG 0.537777 4_4:+8096078 None:intergenic
AATATGTGCAGGCTGCAACT+TGG 0.539391 4_4:-8095347 Msa0667620:intron
CAAGAAACTTCCTAAACCAC+CGG 0.545200 4_4:+8094654 None:intergenic
TTGGCTATATGTTTGTCCAA+AGG 0.547740 4_4:-8095328 Msa0667620:CDS
AGGAAAGTATCCAGTAAGCT+TGG 0.553174 4_4:-8095783 Msa0667620:CDS
TTTCCTTTGTGTACAACAGT+AGG 0.554600 4_4:+8095295 None:intergenic
TCATTGTTTGGGACTGCCGT+GGG 0.557175 4_4:+8103941 None:intergenic
GGTCTCTTTCTCTTTGAAGG+GGG 0.568914 4_4:+8101254 None:intergenic
GCTGTACATGAAGACGGAAG+AGG 0.569110 4_4:-8098404 Msa0667620:CDS
ACTGCATACAGGGATGGTAA+AGG 0.570057 4_4:-8097657 Msa0667620:intron
GTATTCAAAGTGTAAGAGAA+TGG 0.570526 4_4:+8096113 None:intergenic
GATTCTCCATATCTTGGCCA+AGG 0.571513 4_4:-8097332 Msa0667620:CDS
GACACCCTAAGCTCTCTGCC+CGG 0.573913 4_4:-8094673 Msa0667620:CDS
CTTGACGATATTTCCGAATG+TGG 0.577303 4_4:+8101233 None:intergenic
GTGTTGATAATGTAGTATGA+AGG 0.577599 4_4:-8098428 Msa0667620:intron
GATATATTTGCCCATACACC+AGG 0.579641 4_4:-8098368 Msa0667620:intron
TGGGACATACATTGGAGCAT+GGG 0.581493 4_4:-8095431 Msa0667620:intron
ATGGGACATACATTGGAGCA+TGG 0.582897 4_4:-8095432 Msa0667620:CDS
TGTAAAATATGATTCCTGCT+TGG 0.587277 4_4:+8097183 None:intergenic
TTCGGAAATATCGTCAAGTA+CGG 0.592831 4_4:-8101228 Msa0667620:CDS
AGCTCACACAGTATTATTGG+TGG 0.593450 4_4:+8094593 None:intergenic
GAATACATCAGATTGGTACC+AGG 0.597455 4_4:-8096096 Msa0667620:CDS
AAAACGTACCTGGTAATTGG+AGG 0.599628 4_4:+8099230 None:intergenic
TATATTTCATAGATATCCCA+CGG 0.600055 4_4:-8103957 Msa0667620:five_prime_UTR
GATTGCTCTGCAGTGAACGT+TGG 0.602380 4_4:+8095740 None:intergenic
GGCTATATGTTTGTCCAAAG+GGG 0.602874 4_4:-8095326 Msa0667620:CDS
CATACAGGGATGGTAAAGGA+TGG 0.607856 4_4:-8097653 Msa0667620:intron
TGACAGATAAGAATAAAGAT+GGG 0.612129 4_4:-8095450 Msa0667620:intron
GTGTGTTTGTCGCATTTGTG+TGG 0.615318 4_4:-8094282 Msa0667620:three_prime_UTR
ATGTAAAAGGATACTTTGCA+TGG 0.622027 4_4:-8094781 Msa0667620:CDS
AGTGGCGGTGTAAACCAAGC+AGG 0.626808 4_4:-8097197 Msa0667620:CDS
TCTTCTTCATCAATAAAGAG+GGG 0.629116 4_4:-8094441 Msa0667620:three_prime_UTR
GAAGGTGCTGTACATGAAGA+CGG 0.631814 4_4:-8098410 Msa0667620:CDS
AGCAAGAAGTTGGTTGTGTG+TGG 0.636210 4_4:+8096073 None:intergenic
CACGGCAGTCCCAAACAATG+AGG 0.637240 4_4:-8103939 Msa0667620:exon
CCATCCAAACATGAAATCAA+GGG 0.640294 4_4:+8095920 None:intergenic
TACTCATCTTGTAAGGCCTG+GGG 0.645812 4_4:+8097002 None:intergenic
TGCATTGGCAGCATACATGC+TGG 0.650774 4_4:+8095670 None:intergenic
CCTATACAGTCTGGATCAGG+CGG 0.652705 4_4:-8095635 Msa0667620:CDS
TATGCAGAAGGAAAACTAAG+TGG 0.653344 4_4:-8097215 Msa0667620:intron
CGGAAGAGGAATTGGTACAT+GGG 0.654494 4_4:-8098390 Msa0667620:CDS
TCCTACACTATCACTCGAAG+AGG 0.658030 4_4:-8094998 Msa0667620:CDS
GGACCTACTGTTGTACACAA+AGG 0.659998 4_4:-8095298 Msa0667620:CDS
AAGAAACTTCCTAAACCACC+GGG 0.661886 4_4:+8094655 None:intergenic
ACCCTAAGCTCTCTGCCCGG+TGG 0.683098 4_4:-8094670 Msa0667620:CDS
GCAGAAGGAAAACTAAGTGG+CGG 0.686824 4_4:-8097212 Msa0667620:intron
GCCTTACAAGATGAGTATGG+AGG 0.687554 4_4:-8096996 Msa0667620:CDS
TATCCAGATCTGCAACGTGG+AGG 0.690239 4_4:+8094163 None:intergenic
GCCTCTTCGAGTGATAGTGT+AGG 0.709813 4_4:+8094997 None:intergenic
ATGTATCCAGATCTGCAACG+TGG 0.727755 4_4:+8094160 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAAATAATATAAAAA+TGG + chr4_4:8094974-8094993 None:intergenic 0.0%
!!! TTGTATTTTTTTTTAGTATA+TGG + chr4_4:8096268-8096287 None:intergenic 10.0%
!! TTATAATTTCCAAATAATTT+AGG - chr4_4:8096679-8096698 Msa0667620:intron 10.0%
!!! TAAAGGTTTAATTATTTTTT+AGG + chr4_4:8096707-8096726 None:intergenic 10.0%
!! AAAAAGCAAAATTATATTTA+AGG + chr4_4:8097028-8097047 None:intergenic 10.0%
!!! TTAAATATAATTTTGCTTTT+TGG - chr4_4:8097027-8097046 Msa0667620:CDS 10.0%
!! AAATAAAGAAAACAAATAAT+GGG + chr4_4:8097518-8097537 None:intergenic 10.0%
!! AAAATAAAGAAAACAAATAA+TGG + chr4_4:8097519-8097538 None:intergenic 10.0%
!!! TCAAAACTAATATATTTTTT+GGG + chr4_4:8097744-8097763 None:intergenic 10.0%
!!! TTCAAAACTAATATATTTTT+TGG + chr4_4:8097745-8097764 None:intergenic 10.0%
!! CATTTAAATGAAAAAAAAAT+TGG + chr4_4:8098467-8098486 None:intergenic 10.0%
!!! TAAAAATATTTTATTGTTCT+TGG + chr4_4:8098779-8098798 None:intergenic 10.0%
!!! ATTTCTTTAATGTTTATTTT+AGG - chr4_4:8098828-8098847 Msa0667620:intron 10.0%
!!! TTTCTTTAATGTTTATTTTA+GGG - chr4_4:8098829-8098848 Msa0667620:intron 10.0%
!! AATAGATAAAAAAAAATTGA+AGG + chr4_4:8100069-8100088 None:intergenic 10.0%
!!! TCAATTTTTTTTTATCTATT+TGG - chr4_4:8100069-8100088 Msa0667620:intron 10.0%
!!! ATATTTTTATTTTACACTAT+CGG + chr4_4:8100304-8100323 None:intergenic 10.0%
!! AAAAAAGATTTCAAATTATA+CGG + chr4_4:8102334-8102353 None:intergenic 10.0%
!! TTCTAATAAATTTAAATCAT+AGG - chr4_4:8103131-8103150 Msa0667620:intron 10.0%
!!! TCACTTATTTTAATAAAAAA+AGG + chr4_4:8103811-8103830 None:intergenic 10.0%
!! ATATCTATGAAATATAACTA+AGG + chr4_4:8094209-8094228 None:intergenic 15.0%
!!! ATATCAACTCTTTTTAATAT+TGG - chr4_4:8094299-8094318 Msa0667620:three_prime_UTR 15.0%
!! TCATTAATTAACCATTAATT+TGG - chr4_4:8094657-8094676 Msa0667620:CDS 15.0%
!! TAGTTTAAAAACCAAATTAA+TGG + chr4_4:8094671-8094690 None:intergenic 15.0%
!! TGTATTTCAAAAAAGTTTAT+TGG + chr4_4:8095257-8095276 None:intergenic 15.0%
!!! GCTTAAATATATTTTATTTG+TGG + chr4_4:8095492-8095511 None:intergenic 15.0%
!! AAATACTTATCATTTGATTA+TGG - chr4_4:8095524-8095543 Msa0667620:intron 15.0%
!!! ACAAACTTTTTTTTTGTTTA+GGG + chr4_4:8095586-8095605 None:intergenic 15.0%
!!! TACAAACTTTTTTTTTGTTT+AGG + chr4_4:8095587-8095606 None:intergenic 15.0%
!! ACAAAAAATATTGTAGTTTA+GGG + chr4_4:8095617-8095636 None:intergenic 15.0%
!! TACAAAAAATATTGTAGTTT+AGG + chr4_4:8095618-8095637 None:intergenic 15.0%
!! ATATGATAGAGATATAATAA+AGG - chr4_4:8095728-8095747 Msa0667620:CDS 15.0%
!! TATGATAGAGATATAATAAA+GGG - chr4_4:8095729-8095748 Msa0667620:CDS 15.0%
!! AAAATTTGGATTTCAAAATA+GGG + chr4_4:8096370-8096389 None:intergenic 15.0%
!! TAAAATTTGGATTTCAAAAT+AGG + chr4_4:8096371-8096390 None:intergenic 15.0%
!! TTGAAAATATATAATACAGT+GGG + chr4_4:8096396-8096415 None:intergenic 15.0%
!! TCCTGAAAAAATATATTATA+GGG + chr4_4:8096427-8096446 None:intergenic 15.0%
!! ATCCTGAAAAAATATATTAT+AGG + chr4_4:8096428-8096447 None:intergenic 15.0%
!!! ATATATTTTTTCAGGATTTT+AGG - chr4_4:8096431-8096450 Msa0667620:intron 15.0%
!!! TATATTTTTTCAGGATTTTA+GGG - chr4_4:8096432-8096451 Msa0667620:intron 15.0%
!! TTTCTATATTGTATAACATT+AGG - chr4_4:8097162-8097181 Msa0667620:CDS 15.0%
!!! TTATTTTTACCTTTTTAAGA+GGG + chr4_4:8097387-8097406 None:intergenic 15.0%
!!! TTTATTTTTACCTTTTTAAG+AGG + chr4_4:8097388-8097407 None:intergenic 15.0%
!! AAAATAAAGAAAACAAAGAA+AGG - chr4_4:8097400-8097419 Msa0667620:intron 15.0%
!! AAATAAAGAAAACAAAGAAA+GGG - chr4_4:8097401-8097420 Msa0667620:intron 15.0%
!!! CAAAACTAATATATTTTTTG+GGG + chr4_4:8097743-8097762 None:intergenic 15.0%
!!! TATATTAGTTTTGAATTAGT+TGG - chr4_4:8097750-8097769 Msa0667620:intron 15.0%
!! CAATGTTTATTAATTATTTG+AGG + chr4_4:8097796-8097815 None:intergenic 15.0%
!! ATAGTCATAAACATATTAAA+TGG - chr4_4:8097972-8097991 Msa0667620:intron 15.0%
!! TAGTCATAAACATATTAAAT+GGG - chr4_4:8097973-8097992 Msa0667620:intron 15.0%
!! AATAATCTAATTGTTTACAT+TGG - chr4_4:8098012-8098031 Msa0667620:intron 15.0%
!! CAATCAATTATAGATAAAAT+TGG - chr4_4:8098063-8098082 Msa0667620:intron 15.0%
!! CAATAACTATTTAAAAAAGT+TGG + chr4_4:8098109-8098128 None:intergenic 15.0%
!!! ATTGAATAAATTTTGTTTAG+AGG - chr4_4:8098324-8098343 Msa0667620:intron 15.0%
!!! TAAGGATAAAATACTTTTTT+AGG + chr4_4:8098355-8098374 None:intergenic 15.0%
!!! TTCTTTAATGTTTATTTTAG+GGG - chr4_4:8098830-8098849 Msa0667620:intron 15.0%
!!! GGAATTAAACATAATTTTTT+TGG + chr4_4:8099044-8099063 None:intergenic 15.0%
!!! TTTAATACATGTTTTTTCTT+TGG + chr4_4:8099084-8099103 None:intergenic 15.0%
!! TTAAATAAAGAGAAATTCTT+AGG - chr4_4:8099099-8099118 Msa0667620:intron 15.0%
!! TATTACTTTCTATAAATTTC+TGG + chr4_4:8099570-8099589 None:intergenic 15.0%
!!! TATTTTCTTATATTTTAGAC+CGG + chr4_4:8099599-8099618 None:intergenic 15.0%
!! AATAAAACTATAATTATCGA+AGG + chr4_4:8099842-8099861 None:intergenic 15.0%
!! ATATAAATCATTTGAAAGTT+TGG + chr4_4:8100170-8100189 None:intergenic 15.0%
!!! AAATAATTTTAGTGATCAAA+AGG - chr4_4:8100667-8100686 Msa0667620:intron 15.0%
!!! ATTAAACATTTTCTATTACT+TGG + chr4_4:8100870-8100889 None:intergenic 15.0%
!! GTAATAGAAAATGTTTAATT+TGG - chr4_4:8100871-8100890 Msa0667620:intron 15.0%
!! TATGATATACTAATAAAGTA+TGG + chr4_4:8101058-8101077 None:intergenic 15.0%
!! TTCATAATAATACAAATTGA+TGG - chr4_4:8101093-8101112 Msa0667620:intron 15.0%
!! AATATAATAACAACATAGAT+TGG + chr4_4:8101450-8101469 None:intergenic 15.0%
!! ATTCAAGAAATAATAAATTG+AGG - chr4_4:8101895-8101914 Msa0667620:intron 15.0%
!!! TTAACTATATTGTTGTTTTT+TGG - chr4_4:8103341-8103360 Msa0667620:intron 15.0%
!!! ATCGACTAATATTTTTACAA+AGG + chr4_4:8094281-8094300 None:intergenic 20.0%
!! AATGTTATTATGTATAGAGT+TGG - chr4_4:8094365-8094384 Msa0667620:three_prime_UTR 20.0%
!!! ATCTTTGGATCATTTTTAAA+AGG + chr4_4:8094942-8094961 None:intergenic 20.0%
!!! TTTTAAAAATGATCCAAAGA+TGG - chr4_4:8094941-8094960 Msa0667620:CDS 20.0%
!! TAAAACAAACGCTAATTTAA+GGG + chr4_4:8095050-8095069 None:intergenic 20.0%
!! TTAAAACAAACGCTAATTTA+AGG + chr4_4:8095051-8095070 None:intergenic 20.0%
!!! ATAAAGGTGCTTATTAATTA+CGG + chr4_4:8095133-8095152 None:intergenic 20.0%
!!! ATTTATTAACTTTTTTCCTG+AGG - chr4_4:8095303-8095322 Msa0667620:CDS 20.0%
!! TTATGGAGAATTAATTGTAT+CGG - chr4_4:8095461-8095480 Msa0667620:intron 20.0%
!!! ATGGCGTTTAATTATTTTAT+AGG - chr4_4:8095543-8095562 Msa0667620:intron 20.0%
!! TTTAGGGATAAAATATTTCA+AGG + chr4_4:8095570-8095589 None:intergenic 20.0%
!! ATTATCTAATTATCTGCAAA+AGG + chr4_4:8096169-8096188 None:intergenic 20.0%
!! ATTTATATATATCGCATTGT+AGG - chr4_4:8096210-8096229 Msa0667620:intron 20.0%
!! CCAAAAAATATAATAGTTCA+AGG + chr4_4:8096297-8096316 None:intergenic 20.0%
!!! CCTTGAACTATTATATTTTT+TGG - chr4_4:8096294-8096313 Msa0667620:intron 20.0%
!! TGAAAATATATAATACAGTG+GGG + chr4_4:8096395-8096414 None:intergenic 20.0%
!! CTTGAAAATATATAATACAG+TGG + chr4_4:8096397-8096416 None:intergenic 20.0%
!! CTGAAAAAATATATTATAGG+GGG + chr4_4:8096425-8096444 None:intergenic 20.0%
!! CCTGAAAAAATATATTATAG+GGG + chr4_4:8096426-8096445 None:intergenic 20.0%
!!! ATATTTTTTCAGGATTTTAG+GGG - chr4_4:8096433-8096452 Msa0667620:intron 20.0%
!!! CTCACTGTTTTATAATTTTT+AGG + chr4_4:8096468-8096487 None:intergenic 20.0%
!! CTAAAAATTATAAAACAGTG+AGG - chr4_4:8096466-8096485 Msa0667620:intron 20.0%
!!! TAACTCGCTATTTTAAAATT+CGG + chr4_4:8096500-8096519 None:intergenic 20.0%
!!! GCAAGAAAAAAATTAGTTTA+AGG - chr4_4:8096621-8096640 Msa0667620:intron 20.0%
!!! TTTTAGGTTCCTAAATTATT+TGG + chr4_4:8096691-8096710 None:intergenic 20.0%
!!! AACATCACATGATTTTATTT+AGG + chr4_4:8096796-8096815 None:intergenic 20.0%
!! AAAATAACGTTATAAAGTTG+AGG + chr4_4:8096838-8096857 None:intergenic 20.0%
!!! TTAGGCATTTTAAATAGTTA+TGG + chr4_4:8096875-8096894 None:intergenic 20.0%
!!! ACTATTTAAAATGCCTAATT+TGG - chr4_4:8096877-8096896 Msa0667620:intron 20.0%
!!! TATTGTTTCATTCTTGTTTT+CGG - chr4_4:8097268-8097287 Msa0667620:intron 20.0%
!! AATAAAGAAAACAAAGAAAG+GGG - chr4_4:8097402-8097421 Msa0667620:intron 20.0%
!!! TTTATTTTGACCTTTTTAAG+AGG - chr4_4:8097531-8097550 Msa0667620:intron 20.0%
!!! TTATTTTGACCTTTTTAAGA+GGG - chr4_4:8097532-8097551 Msa0667620:intron 20.0%
!! TAGATTTATTTGTAATTGTC+TGG - chr4_4:8097887-8097906 Msa0667620:intron 20.0%
!!! TAAAAAAGTGTTTTTAGTCT+TGG + chr4_4:8098277-8098296 None:intergenic 20.0%
!! AATTTGAAAATGAATCTTCA+AGG + chr4_4:8098602-8098621 None:intergenic 20.0%
!! TTATTTAAGAAATGGAAACT+GGG + chr4_4:8099430-8099449 None:intergenic 20.0%
!! TTTATTTAAGAAATGGAAAC+TGG + chr4_4:8099431-8099450 None:intergenic 20.0%
!!! AATATGTGTCATGTTTTAAT+TGG - chr4_4:8099475-8099494 Msa0667620:intron 20.0%
!! GATGTATCAGATTTATATTA+TGG - chr4_4:8099646-8099665 Msa0667620:intron 20.0%
!! TATTGAATCTTAAGAATTTG+AGG - chr4_4:8099694-8099713 Msa0667620:intron 20.0%
!! AAGGAAAAAAAATATATACC+TGG + chr4_4:8099823-8099842 None:intergenic 20.0%
!! AAAAAAAAATTGAAGGTCTT+GGG + chr4_4:8100062-8100081 None:intergenic 20.0%
!! TAAAAAAAAATTGAAGGTCT+TGG + chr4_4:8100063-8100082 None:intergenic 20.0%
!!! ATCATATTTTTCTTCTAATG+TGG - chr4_4:8100479-8100498 Msa0667620:intron 20.0%
!! GAAATTATATATCACATTAG+AGG + chr4_4:8100589-8100608 None:intergenic 20.0%
!!! AACCATTTTTACATCTTAAT+AGG - chr4_4:8100773-8100792 Msa0667620:intron 20.0%
!! TTCCTATTAAGATGTAAAAA+TGG + chr4_4:8100778-8100797 None:intergenic 20.0%
!! GTTGGAAATATATAGAAAAA+TGG + chr4_4:8101557-8101576 None:intergenic 20.0%
!!! AATCTTTTTTATCTGTTTAC+AGG - chr4_4:8102344-8102363 Msa0667620:intron 20.0%
!! AAACAATTTATGTCAAACAA+GGG + chr4_4:8102686-8102705 None:intergenic 20.0%
!! AAAACAATTTATGTCAAACA+AGG + chr4_4:8102687-8102706 None:intergenic 20.0%
!! TTCTGATTTAAGTAAATAGA+GGG + chr4_4:8103271-8103290 None:intergenic 20.0%
!! ATTCTGATTTAAGTAAATAG+AGG + chr4_4:8103272-8103291 None:intergenic 20.0%
!! CTTGAACATAATAGAATTAT+TGG - chr4_4:8103535-8103554 Msa0667620:intron 20.0%
!!! TCTTTTATTTTGTGATTTAG+TGG - chr4_4:8103849-8103868 Msa0667620:intron 20.0%
! TATATTTCATAGATATCCCA+CGG - chr4_4:8094213-8094232 Msa0667620:three_prime_UTR 25.0%
!! TTTGTACAATCGATTGTTTT+AGG - chr4_4:8094539-8094558 Msa0667620:three_prime_UTR 25.0%
!!! TTGAGTGTCATTAATTTTAG+TGG + chr4_4:8094593-8094612 None:intergenic 25.0%
! AATCCAGTATATTCTCAATT+TGG + chr4_4:8094772-8094791 None:intergenic 25.0%
! CATTAAAGATGTGTTTAACA+TGG - chr4_4:8094915-8094934 Msa0667620:intron 25.0%
! AAAACAAACGCTAATTTAAG+GGG + chr4_4:8095049-8095068 None:intergenic 25.0%
!! TATTAATTACGGTGCTAAAT+AGG + chr4_4:8095122-8095141 None:intergenic 25.0%
! ATTAATAAGCACCTTTATTG+TGG - chr4_4:8095135-8095154 Msa0667620:intron 25.0%
! AACGACATTGAGTTATTAAT+AGG - chr4_4:8095276-8095295 Msa0667620:CDS 25.0%
! TAATTCTCCATAATGTTTAC+TGG + chr4_4:8095454-8095473 None:intergenic 25.0%
!! TATTTTGTCTTACTCTGATA+TGG + chr4_4:8095711-8095730 None:intergenic 25.0%
! TGGATATAGATGAAAGAATA+CGG - chr4_4:8095827-8095846 Msa0667620:intron 25.0%
! AAAGAGAATGTATAGAAGAT+AGG + chr4_4:8095897-8095916 None:intergenic 25.0%
! AGAAGAGAGAATATATGAAA+GGG + chr4_4:8096079-8096098 None:intergenic 25.0%
! TAGAAGAGAGAATATATGAA+AGG + chr4_4:8096080-8096099 None:intergenic 25.0%
! AAAAATCCTCAAGTAGTTTA+AGG + chr4_4:8096237-8096256 None:intergenic 25.0%
!! CTACTTGAGGATTTTTAAAT+AGG - chr4_4:8096241-8096260 Msa0667620:intron 25.0%
!!! CCCCTATAATATATTTTTTC+AGG - chr4_4:8096423-8096442 Msa0667620:intron 25.0%
! ATTTAGGCACATATATAGAT+GGG + chr4_4:8096780-8096799 None:intergenic 25.0%
! TATTTAGGCACATATATAGA+TGG + chr4_4:8096781-8096800 None:intergenic 25.0%
!!! ATTGTTTCATTCTTGTTTTC+GGG - chr4_4:8097269-8097288 Msa0667620:intron 25.0%
! TTATTAGAACCCTCTTAAAA+AGG - chr4_4:8097375-8097394 Msa0667620:CDS 25.0%
! ATAAAGAAAACAAAGAAAGG+GGG - chr4_4:8097403-8097422 Msa0667620:intron 25.0%
!!! AACAAGTTGATAATCCAAAT+CGG + chr4_4:8097474-8097493 None:intergenic 25.0%
!! TATATAGTTGTTATTGCGAT+TGG + chr4_4:8097918-8097937 None:intergenic 25.0%
! TATCCTTAAGTTTACTATGT+TGG - chr4_4:8098367-8098386 Msa0667620:intron 25.0%
! AAACCAACATAGTAAACTTA+AGG + chr4_4:8098373-8098392 None:intergenic 25.0%
! AAATAGAACATTGGAAGAAA+TGG + chr4_4:8098498-8098517 None:intergenic 25.0%
! CGAAAGAAAAAATAGAACAT+TGG + chr4_4:8098507-8098526 None:intergenic 25.0%
! ATCTTAGTAATAAGTGATCA+TGG + chr4_4:8098630-8098649 None:intergenic 25.0%
!!! TTTAATGTTTATTTTAGGGG+CGG - chr4_4:8098833-8098852 Msa0667620:intron 25.0%
!!! TATGCTTTTGCTTTTTGTAA+TGG - chr4_4:8099011-8099030 Msa0667620:intron 25.0%
! AATTCCTAATGCTATAAGAT+TGG - chr4_4:8099058-8099077 Msa0667620:intron 25.0%
!! AAACTTTTCAGTTTTTGCTT+TGG - chr4_4:8099183-8099202 Msa0667620:intron 25.0%
!! AACTTTTCAGTTTTTGCTTT+GGG - chr4_4:8099184-8099203 Msa0667620:intron 25.0%
! ATAGAAAGTAATACTTCTTC+CGG - chr4_4:8099577-8099596 Msa0667620:intron 25.0%
!! ATTTGAGGTTAATATGTCAA+CGG - chr4_4:8099709-8099728 Msa0667620:intron 25.0%
! AAAATATATACCTGGTGTAT+GGG + chr4_4:8099815-8099834 None:intergenic 25.0%
! AAAAATATATACCTGGTGTA+TGG + chr4_4:8099816-8099835 None:intergenic 25.0%
! TGTAGACTGATTATAATTGA+GGG + chr4_4:8100118-8100137 None:intergenic 25.0%
! ATGTAGACTGATTATAATTG+AGG + chr4_4:8100119-8100138 None:intergenic 25.0%
!! TCTTTTCTTCAATATCTAAC+AGG + chr4_4:8100387-8100406 None:intergenic 25.0%
!! TTTTCTTCTAATGTGGTAAT+TGG - chr4_4:8100486-8100505 Msa0667620:intron 25.0%
!! AGAGAAAGATTAGAATGTTT+TGG - chr4_4:8101265-8101284 Msa0667620:intron 25.0%
! TAACTAACTAGTTAGTTAGT+TGG + chr4_4:8101789-8101808 None:intergenic 25.0%
! ATTCTAATGTTAGTTAGTTG+TGG + chr4_4:8101849-8101868 None:intergenic 25.0%
!! TATATGCAGAGATGATTTTA+AGG - chr4_4:8101969-8101988 Msa0667620:intron 25.0%
! ATTGTATAAAACCACATATC+AGG - chr4_4:8102137-8102156 Msa0667620:intron 25.0%
!! ATTGGGTCATATGATTTTAT+TGG - chr4_4:8102463-8102482 Msa0667620:intron 25.0%
!! GTTTGACATAAATTGTTTTC+TGG - chr4_4:8102688-8102707 Msa0667620:intron 25.0%
! ATGACAGATAAGAATAAAGA+TGG - chr4_4:8102719-8102738 Msa0667620:intron 25.0%
! TGACAGATAAGAATAAAGAT+GGG - chr4_4:8102720-8102739 Msa0667620:intron 25.0%
!! TTTTCTGTTATGATAATCGT+AGG + chr4_4:8102912-8102931 None:intergenic 25.0%
! ACGATTATCATAACAGAAAA+TGG - chr4_4:8102912-8102931 Msa0667620:intron 25.0%
! GTTTATTAGACACTGAAAAA+AGG + chr4_4:8103098-8103117 None:intergenic 25.0%
!! ATTATCTTTTATCTGCAATG+AGG - chr4_4:8103240-8103259 Msa0667620:intron 25.0%
!!! TTTTTTGGTTTTTTGTGTGA+AGG - chr4_4:8103356-8103375 Msa0667620:intron 25.0%
! TTCTTCTTCATCAATAAAGA+GGG - chr4_4:8103728-8103747 Msa0667620:intron 25.0%
CTTGTTTAAGTGCATGTATT+CGG + chr4_4:8094168-8094187 None:intergenic 30.0%
!! TTAATTTTAGTGGCATAGGT+CGG + chr4_4:8094583-8094602 None:intergenic 30.0%
!! GTCATTAATTTTAGTGGCAT+AGG + chr4_4:8094587-8094606 None:intergenic 30.0%
GTCAAGATCAACATGAATTA+AGG + chr4_4:8094623-8094642 None:intergenic 30.0%
GAACCAAATTGAGAATATAC+TGG - chr4_4:8094766-8094785 Msa0667620:CDS 30.0%
TCATTATCATGTGTACCAAA+CGG + chr4_4:8094838-8094857 None:intergenic 30.0%
AAATGGAAAACTTCCATCTT+TGG + chr4_4:8094957-8094976 None:intergenic 30.0%
CTAATATATACCCAAACCAA+CGG + chr4_4:8095022-8095041 None:intergenic 30.0%
TGGATGCTCTAATATCATTT+GGG + chr4_4:8095082-8095101 None:intergenic 30.0%
! ACATTTTCTCTCCACAATAA+AGG + chr4_4:8095149-8095168 None:intergenic 30.0%
TATTGTGGAGAGAAAATGTT+TGG - chr4_4:8095150-8095169 Msa0667620:intron 30.0%
ACGAAAATTAAAGAGAGAGA+GGG + chr4_4:8095206-8095225 None:intergenic 30.0%
!! TCTCTCTCTTTAATTTTCGT+GGG - chr4_4:8095206-8095225 Msa0667620:intron 30.0%
AAAGAGAGAATGAGATAAAG+TGG - chr4_4:8095807-8095826 Msa0667620:CDS 30.0%
AAGAGAGAATATATGAAAGG+GGG + chr4_4:8096077-8096096 None:intergenic 30.0%
GAAGAGAGAATATATGAAAG+GGG + chr4_4:8096078-8096097 None:intergenic 30.0%
AATACAGTGGGGTTAAAATT+TGG + chr4_4:8096384-8096403 None:intergenic 30.0%
CTTCATTGAGAAGAATTTGA+AGG + chr4_4:8097142-8097161 None:intergenic 30.0%
TCATCCATAAACATCAAATG+TGG + chr4_4:8097245-8097264 None:intergenic 30.0%
!!! TTGTTTCATTCTTGTTTTCG+GGG - chr4_4:8097270-8097289 Msa0667620:intron 30.0%
! AAGAGGGTTCTAATAAAAAG+AGG + chr4_4:8097371-8097390 None:intergenic 30.0%
AAACCAAAACCCTCTTAAAA+AGG + chr4_4:8097544-8097563 None:intergenic 30.0%
TCTAATTGTTTACATTGGAG+AGG - chr4_4:8098017-8098036 Msa0667620:intron 30.0%
AAAACTGTCAGCATAAATAG+AGG + chr4_4:8098871-8098890 None:intergenic 30.0%
!!! AATTTTGATTTCCTCGTAAG+AGG - chr4_4:8099269-8099288 Msa0667620:CDS 30.0%
AGATGTAAGAATGATGTGTT+GGG - chr4_4:8099500-8099519 Msa0667620:intron 30.0%
!! GTGTTGATAATGTAGTATGA+AGG - chr4_4:8099742-8099761 Msa0667620:intron 30.0%
AGAGTTTATAGACAAGTCAT+AGG - chr4_4:8100224-8100243 Msa0667620:intron 30.0%
TGATCACTATCATCGTTATA+AGG - chr4_4:8100561-8100580 Msa0667620:intron 30.0%
GTTAGAGTTGTTAATGCATA+TGG + chr4_4:8100932-8100951 None:intergenic 30.0%
AACTCTAACAAATATGCAGA+AGG - chr4_4:8100943-8100962 Msa0667620:intron 30.0%
TGTAAAATATGATTCCTGCT+TGG + chr4_4:8100990-8101009 None:intergenic 30.0%
ATTGATGGAATTATTGATCC+AGG - chr4_4:8101108-8101127 Msa0667620:intron 30.0%
!! ATATGTGACCCTTTTTCATT+GGG - chr4_4:8101140-8101159 Msa0667620:intron 30.0%
! CTTTAGAGAGAAAACTACAA+AGG - chr4_4:8101630-8101649 Msa0667620:intron 30.0%
AAATCAACTATGTTGTTGGT+TGG + chr4_4:8101824-8101843 None:intergenic 30.0%
GGATAAATCAACTATGTTGT+TGG + chr4_4:8101828-8101847 None:intergenic 30.0%
GATATATGCTTCAAGGAATT+TGG - chr4_4:8102000-8102019 Msa0667620:intron 30.0%
GTATTCAAAGTGTAAGAGAA+TGG + chr4_4:8102060-8102079 None:intergenic 30.0%
ACACTTTGAATACATCAGAT+TGG - chr4_4:8102067-8102086 Msa0667620:intron 30.0%
CAAAATGGTATAATAGGCAT+TGG - chr4_4:8102162-8102181 Msa0667620:intron 30.0%
!! AGCAATCTAAGAGTCTTATT+GGG - chr4_4:8102446-8102465 Msa0667620:intron 30.0%
ACTGTTAATGTGACTTTAAC+AGG - chr4_4:8102586-8102605 Msa0667620:intron 30.0%
AATAAAGATGGGACATACAT+TGG - chr4_4:8102731-8102750 Msa0667620:intron 30.0%
AACAACTAAACAATATGTGC+AGG - chr4_4:8102812-8102831 Msa0667620:intron 30.0%
ATGTAAAAGGATACTTTGCA+TGG - chr4_4:8103389-8103408 Msa0667620:intron 30.0%
CTTCTTCTTCATCAATAAAG+AGG - chr4_4:8103727-8103746 Msa0667620:intron 30.0%
TCTTCTTCATCAATAAAGAG+GGG - chr4_4:8103729-8103748 Msa0667620:intron 30.0%
AAGAGAAAAACGAGATACAT+GGG + chr4_4:8103787-8103806 None:intergenic 30.0%
AAAGAGAAAAACGAGATACA+TGG + chr4_4:8103788-8103807 None:intergenic 30.0%
! TTCATTGATTGAATCTGCAT+TGG + chr4_4:8103979-8103998 None:intergenic 30.0%
GATCACATTCCTCATTGTTT+GGG + chr4_4:8094243-8094262 None:intergenic 35.0%
TGATCACATTCCTCATTGTT+TGG + chr4_4:8094244-8094263 None:intergenic 35.0%
AAACAATGAGGAATGTGATC+AGG - chr4_4:8094243-8094262 Msa0667620:three_prime_UTR 35.0%
AAGCAAAATTACTGTAACCG+TGG + chr4_4:8094479-8094498 None:intergenic 35.0%
! ACGGTTACAGTAATTTTGCT+TGG - chr4_4:8094478-8094497 Msa0667620:three_prime_UTR 35.0%
CTCAATTTCATGCTCTTTCT+CGG - chr4_4:8094508-8094527 Msa0667620:three_prime_UTR 35.0%
!!! AATCGATTGTTTTAGGACGT+GGG - chr4_4:8094546-8094565 Msa0667620:three_prime_UTR 35.0%
!!! CATTATTTTTAGGGTCCGTT+TGG - chr4_4:8094820-8094839 Msa0667620:intron 35.0%
AAAATATGATGATCCACCGT+TGG - chr4_4:8095003-8095022 Msa0667620:CDS 35.0%
ATGCTCTAATATCATTTGGG+AGG + chr4_4:8095079-8095098 None:intergenic 35.0%
GTGGATGCTCTAATATCATT+TGG + chr4_4:8095083-8095102 None:intergenic 35.0%
!! TGTTTGGTGCTTGTAAAGAA+TGG - chr4_4:8095166-8095185 Msa0667620:intron 35.0%
CACGAAAATTAAAGAGAGAG+AGG + chr4_4:8095207-8095226 None:intergenic 35.0%
!! CTCTCTCTCTTTAATTTTCG+TGG - chr4_4:8095205-8095224 Msa0667620:intron 35.0%
!! CTCTCTCTTTAATTTTCGTG+GGG - chr4_4:8095207-8095226 Msa0667620:intron 35.0%
AGATGTGCCAGTAAACATTA+TGG - chr4_4:8095444-8095463 Msa0667620:CDS 35.0%
TACGGTGAAAGAGATAAATG+AGG - chr4_4:8095845-8095864 Msa0667620:intron 35.0%
ACGGTGAAAGAGATAAATGA+GGG - chr4_4:8095846-8095865 Msa0667620:intron 35.0%
AGAAGAAATATGGTAGAGAG+AGG + chr4_4:8095930-8095949 None:intergenic 35.0%
AGAGAACAGATGAAATGAGA+GGG + chr4_4:8096013-8096032 None:intergenic 35.0%
! GAATCAACTTTAGAGAGGAT+GGG + chr4_4:8096044-8096063 None:intergenic 35.0%
! AGAATCAACTTTAGAGAGGA+TGG + chr4_4:8096045-8096064 None:intergenic 35.0%
! AGAGAGAATCAACTTTAGAG+AGG + chr4_4:8096049-8096068 None:intergenic 35.0%
TCTGTTGAAAGCTCCAAATT+AGG + chr4_4:8096893-8096912 None:intergenic 35.0%
AAAGAGAAAGAGACCACATT+CGG - chr4_4:8096924-8096943 Msa0667620:intron 35.0%
TTCGGAAATATCGTCAAGTA+CGG - chr4_4:8096942-8096961 Msa0667620:intron 35.0%
TAGACCAAAATTCTCCTCAA+TGG - chr4_4:8097099-8097118 Msa0667620:intron 35.0%
! AACTCCATTGAGGAGAATTT+TGG + chr4_4:8097106-8097125 None:intergenic 35.0%
ACTCTTAGAAAACTCCATTG+AGG + chr4_4:8097116-8097135 None:intergenic 35.0%
CATTGAGAAGAATTTGAAGG+TGG + chr4_4:8097139-8097158 None:intergenic 35.0%
TCGACCACATTTGATGTTTA+TGG - chr4_4:8097238-8097257 Msa0667620:intron 35.0%
GTGGACAAAGTAACTAATCA+TGG - chr4_4:8097308-8097327 Msa0667620:intron 35.0%
AGGCAATGAATCCTACAAAA+CGG + chr4_4:8097351-8097370 None:intergenic 35.0%
AGTTACAAAAAGCGAACAAG+AGG - chr4_4:8097435-8097454 Msa0667620:intron 35.0%
CGAACAAGAGGATTTCTTTA+GGG - chr4_4:8097447-8097466 Msa0667620:intron 35.0%
!! TGACCTTTTTAAGAGGGTTT+TGG - chr4_4:8097538-8097557 Msa0667620:intron 35.0%
!!! TATATTTTTTGGGGTAGCCA+AGG + chr4_4:8097734-8097753 None:intergenic 35.0%
TTCGACAACTGAACTTGATT+GGG + chr4_4:8097825-8097844 None:intergenic 35.0%
TTTCGACAACTGAACTTGAT+TGG + chr4_4:8097826-8097845 None:intergenic 35.0%
AGCTAGCAAAAAATTTGCAC+AGG + chr4_4:8098429-8098448 None:intergenic 35.0%
GCATAAATAGAGGCAATAAC+AGG + chr4_4:8098861-8098880 None:intergenic 35.0%
!!! CTGACAGTTTTGAGCTAAAT+CGG - chr4_4:8098880-8098899 Msa0667620:intron 35.0%
!!! TTTCCGGAAGGTTTTGTTTT+TGG - chr4_4:8098909-8098928 Msa0667620:intron 35.0%
GTACCAAAAACAAAACCTTC+CGG + chr4_4:8098915-8098934 None:intergenic 35.0%
!!! GAAGGTTTTGTTTTTGGTAC+TGG - chr4_4:8098915-8098934 Msa0667620:intron 35.0%
TACAAAACGTACCTGGTAAT+TGG + chr4_4:8098946-8098965 None:intergenic 35.0%
ACAATGTTACAAAACGTACC+TGG + chr4_4:8098953-8098972 None:intergenic 35.0%
! ATTGTGTGTTACTATGCATG+TGG - chr4_4:8098968-8098987 Msa0667620:intron 35.0%
TTGGCCAATCTTATAGCATT+AGG + chr4_4:8099065-8099084 None:intergenic 35.0%
AACACTTGGAATAGGAGAAA+GGG - chr4_4:8099298-8099317 Msa0667620:CDS 35.0%
! AAGGGCATAAAAGAAGGATT+TGG - chr4_4:8099316-8099335 Msa0667620:CDS 35.0%
GTTCATTCTGTCTCTAACAA+TGG + chr4_4:8099378-8099397 None:intergenic 35.0%
CAGATGTAAGAATGATGTGT+TGG - chr4_4:8099499-8099518 Msa0667620:intron 35.0%
! CTATCCACTAACTAGGTTTT+TGG + chr4_4:8099877-8099896 None:intergenic 35.0%
! CAAAAACCTAGTTAGTGGAT+AGG - chr4_4:8099875-8099894 Msa0667620:intron 35.0%
AAATCATGACCACACCTAAT+TGG - chr4_4:8099913-8099932 Msa0667620:intron 35.0%
CATACAGATTCTCCATATCT+TGG - chr4_4:8100832-8100851 Msa0667620:intron 35.0%
CTATTACTTGGCAATATCCT+TGG + chr4_4:8100858-8100877 None:intergenic 35.0%
TATGCAGAAGGAAAACTAAG+TGG - chr4_4:8100955-8100974 Msa0667620:intron 35.0%
! ATCAATGAGCTACTTGCTAA+TGG - chr4_4:8101018-8101037 Msa0667620:intron 35.0%
CAATGAAAAAGGGTCACATA+TGG + chr4_4:8101141-8101160 None:intergenic 35.0%
!! CATATGTGACCCTTTTTCAT+TGG - chr4_4:8101139-8101158 Msa0667620:intron 35.0%
!! TAAAGTGTGAGGCTTTGTTT+GGG + chr4_4:8101615-8101634 None:intergenic 35.0%
!!! AGTTTTCTCTCTAAAGTGTG+AGG + chr4_4:8101626-8101645 None:intergenic 35.0%
CTAGTTAGTTAGTTGGTTAG+TGG + chr4_4:8101782-8101801 None:intergenic 35.0%
!! AGATGATTTTAAGGACTTCG+TGG - chr4_4:8101978-8101997 Msa0667620:intron 35.0%
CAGGCTCAAAATGGTATAAT+AGG - chr4_4:8102156-8102175 Msa0667620:intron 35.0%
CCATCCAAACATGAAATCAA+GGG + chr4_4:8102253-8102272 None:intergenic 35.0%
ACCATCCAAACATGAAATCA+AGG + chr4_4:8102254-8102273 None:intergenic 35.0%
! GAAACGGTCAAAAAGTATAG+TGG + chr4_4:8102279-8102298 None:intergenic 35.0%
ATCCATGGTTGTTGTAGAAA+CGG + chr4_4:8102295-8102314 None:intergenic 35.0%
! GAGCAATCTAAGAGTCTTAT+TGG - chr4_4:8102445-8102464 Msa0667620:intron 35.0%
AAACCAATTCCTATACAGTC+TGG - chr4_4:8102526-8102545 Msa0667620:intron 35.0%
TTCATTAGGAGTGGTAAGAA+AGG + chr4_4:8102620-8102639 None:intergenic 35.0%
TGATGTATGCCATCTTCATT+AGG + chr4_4:8102634-8102653 None:intergenic 35.0%
TTGGCTATATGTTTGTCCAA+AGG - chr4_4:8102842-8102861 Msa0667620:intron 35.0%
TGGCTATATGTTTGTCCAAA+GGG - chr4_4:8102843-8102862 Msa0667620:intron 35.0%
TTTCCTTTGTGTACAACAGT+AGG + chr4_4:8102878-8102897 None:intergenic 35.0%
CCATTCAAAGTTGTCCAAAA+GGG + chr4_4:8103416-8103435 None:intergenic 35.0%
TCCATTCAAAGTTGTCCAAA+AGG + chr4_4:8103417-8103436 None:intergenic 35.0%
GACAACTTTGAATGGAATGA+CGG - chr4_4:8103421-8103440 Msa0667620:intron 35.0%
CAAAGCTCACACAGTATTAT+TGG + chr4_4:8103583-8103602 None:intergenic 35.0%
CAATAATACTGTGTGAGCTT+TGG - chr4_4:8103581-8103600 Msa0667620:intron 35.0%
! AGAAACTAGAGTTTTGCTGA+CGG + chr4_4:8103709-8103728 None:intergenic 35.0%
CAATAAAGAGGGGTGATTTA+AGG - chr4_4:8103739-8103758 Msa0667620:intron 35.0%
AGAGAAAAACGAGATACATG+GGG + chr4_4:8103786-8103805 None:intergenic 35.0%
!!! GAGTTGGTGATTTTCATTGC+TGG - chr4_4:8094381-8094400 Msa0667620:three_prime_UTR 40.0%
TTTCAGTTCTTTAGCGACCA+CGG - chr4_4:8094459-8094478 Msa0667620:three_prime_UTR 40.0%
TTTCATGCTCTTTCTCGGTT+TGG - chr4_4:8094513-8094532 Msa0667620:three_prime_UTR 40.0%
TTCATGCTCTTTCTCGGTTT+GGG - chr4_4:8094514-8094533 Msa0667620:three_prime_UTR 40.0%
!!! CAATCGATTGTTTTAGGACG+TGG - chr4_4:8094545-8094564 Msa0667620:three_prime_UTR 40.0%
ATATATACCCAAACCAACGG+TGG + chr4_4:8095019-8095038 None:intergenic 40.0%
! ATTAGAGCATCCACAATGCT+AGG - chr4_4:8095089-8095108 Msa0667620:intron 40.0%
! TTGGTGCTTGTAAAGAATGG+TGG - chr4_4:8095169-8095188 Msa0667620:intron 40.0%
!!! TAACTTTTTTCCTGAGGTGC+TGG - chr4_4:8095309-8095328 Msa0667620:CDS 40.0%
!!! AACTTTTTTCCTGAGGTGCT+GGG - chr4_4:8095310-8095329 Msa0667620:CDS 40.0%
CGGTGAAAGAGATAAATGAG+GGG - chr4_4:8095847-8095866 Msa0667620:intron 40.0%
ACTCAGAGGGAGAAGAAATA+TGG + chr4_4:8095940-8095959 None:intergenic 40.0%
ATATTTCTTCTCCCTCTGAG+TGG - chr4_4:8095939-8095958 Msa0667620:CDS 40.0%
TATTTCTTCTCCCTCTGAGT+GGG - chr4_4:8095940-8095959 Msa0667620:CDS 40.0%
TTGTTTATCTCCCACTCAGA+GGG + chr4_4:8095953-8095972 None:intergenic 40.0%
GAGAGAACAGATGAAATGAG+AGG + chr4_4:8096014-8096033 None:intergenic 40.0%
GTAGGTCCTTAAACTACTTG+AGG - chr4_4:8096228-8096247 Msa0667620:intron 40.0%
! TGGTCTCTTTCTCTTTGAAG+GGG + chr4_4:8096920-8096939 None:intergenic 40.0%
GTGGTCTCTTTCTCTTTGAA+GGG + chr4_4:8096921-8096940 None:intergenic 40.0%
TGTGGTCTCTTTCTCTTTGA+AGG + chr4_4:8096922-8096941 None:intergenic 40.0%
CTTGACGATATTTCCGAATG+TGG + chr4_4:8096940-8096959 None:intergenic 40.0%
!!! TCATTCTTGTTTTCGGGGAA+AGG - chr4_4:8097275-8097294 Msa0667620:intron 40.0%
CTACAAAACGGTATCGTGAA+CGG + chr4_4:8097339-8097358 None:intergenic 40.0%
GCGAACAAGAGGATTTCTTT+AGG - chr4_4:8097446-8097465 Msa0667620:intron 40.0%
! GATTTCTTTAGGGACCGATT+TGG - chr4_4:8097457-8097476 Msa0667620:intron 40.0%
TCAGTGTGAGAAGAACATCA+GGG + chr4_4:8097659-8097678 None:intergenic 40.0%
TTCAGTGTGAGAAGAACATC+AGG + chr4_4:8097660-8097679 None:intergenic 40.0%
TCGACAACTGAACTTGATTG+GGG + chr4_4:8097824-8097843 None:intergenic 40.0%
AAGAACTCCTCGATAGAATG+GGG + chr4_4:8098534-8098553 None:intergenic 40.0%
CAAGAACTCCTCGATAGAAT+GGG + chr4_4:8098535-8098554 None:intergenic 40.0%
AAAACGTACCTGGTAATTGG+AGG + chr4_4:8098943-8098962 None:intergenic 40.0%
ACCCAACACATCATTCTTTC+CGG - chr4_4:8099131-8099150 Msa0667620:intron 40.0%
TCCGGAAAGAATGATGTGTT+GGG + chr4_4:8099135-8099154 None:intergenic 40.0%
TTCCGGAAAGAATGATGTGT+TGG + chr4_4:8099136-8099155 None:intergenic 40.0%
AACACATCATTCTTTCCGGA+AGG - chr4_4:8099135-8099154 Msa0667620:intron 40.0%
ACACATCATTCTTTCCGGAA+GGG - chr4_4:8099136-8099155 Msa0667620:intron 40.0%
ATTCACAAGACATACCCTTC+CGG + chr4_4:8099153-8099172 None:intergenic 40.0%
! TTTGATTTCCTCGTAAGAGG+AGG - chr4_4:8099272-8099291 Msa0667620:CDS 40.0%
CAACACTTGGAATAGGAGAA+AGG - chr4_4:8099297-8099316 Msa0667620:CDS 40.0%
! AGGAGAAAGGGCATAAAAGA+AGG - chr4_4:8099310-8099329 Msa0667620:CDS 40.0%
GTTAGAGACAGAATGAACCA+TGG - chr4_4:8099380-8099399 Msa0667620:intron 40.0%
!! GCATTTACTGACTCTCTCTT+TGG + chr4_4:8099406-8099425 None:intergenic 40.0%
GATATATTTGCCCATACACC+AGG - chr4_4:8099802-8099821 Msa0667620:intron 40.0%
CTAGCCAAAAACCTAGTTAG+TGG - chr4_4:8099870-8099889 Msa0667620:intron 40.0%
! CATGATTTGTAAGGCACTTG+TGG + chr4_4:8099901-8099920 None:intergenic 40.0%
! AGGTGTGGTCATGATTTGTA+AGG + chr4_4:8099910-8099929 None:intergenic 40.0%
GTTTGCATGGTGGTTTATCA+TGG - chr4_4:8099976-8099995 Msa0667620:intron 40.0%
GTGGTTTATCATGGTTGTAG+TGG - chr4_4:8099985-8100004 Msa0667620:intron 40.0%
ATGGTTGTAGTGGTGTGATT+TGG - chr4_4:8099995-8100014 Msa0667620:intron 40.0%
! TTGTAGTGGTGTGATTTGGA+CGG - chr4_4:8099999-8100018 Msa0667620:intron 40.0%
AGGGTATGAGTAGCTGAATA+GGG + chr4_4:8100099-8100118 None:intergenic 40.0%
TAATTGGTGCAACTGCATAC+AGG - chr4_4:8100502-8100521 Msa0667620:intron 40.0%
AATTGGTGCAACTGCATACA+GGG - chr4_4:8100503-8100522 Msa0667620:intron 40.0%
CAATATCCTTGGCCAAGATA+TGG + chr4_4:8100847-8100866 None:intergenic 40.0%
TAGCAAGTAGCTCATTGATC+AGG + chr4_4:8101017-8101036 None:intergenic 40.0%
GTCACATATGGTATTTGACC+TGG + chr4_4:8101129-8101148 None:intergenic 40.0%
GGGAAGATCCCAATGAAAAA+GGG + chr4_4:8101151-8101170 None:intergenic 40.0%
ATACTCATCTTGTAAGGCCT+GGG + chr4_4:8101172-8101191 None:intergenic 40.0%
AGAATGATCTCCATACACTC+AGG - chr4_4:8101316-8101335 Msa0667620:intron 40.0%
!! CATACACTCAGGCTTTGTTT+GGG - chr4_4:8101327-8101346 Msa0667620:intron 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG - chr4_4:8101371-8101390 Msa0667620:intron 40.0%
!! CTAAAGTGTGAGGCTTTGTT+TGG + chr4_4:8101616-8101635 None:intergenic 40.0%
! CAACTATGTTGTTGGTTGGT+TGG + chr4_4:8101820-8101839 None:intergenic 40.0%
CTTCGTGGATATATGCTTCA+AGG - chr4_4:8101993-8102012 Msa0667620:intron 40.0%
TTGGAGACAGAGTAAAGCAT+TGG - chr4_4:8102019-8102038 Msa0667620:intron 40.0%
! TGGAGACAGAGTAAAGCATT+GGG - chr4_4:8102020-8102039 Msa0667620:intron 40.0%
GAATACATCAGATTGGTACC+AGG - chr4_4:8102074-8102093 Msa0667620:intron 40.0%
ACCACATATCAGGCTCAAAA+TGG - chr4_4:8102147-8102166 Msa0667620:intron 40.0%
! ACCATTTTGAGCCTGATATG+TGG + chr4_4:8102151-8102170 None:intergenic 40.0%
GCATTGGATTAAACTCTCAC+TGG - chr4_4:8102178-8102197 Msa0667620:intron 40.0%
! TCTAATGGGTCAGTTGAGTA+TGG + chr4_4:8102210-8102229 None:intergenic 40.0%
! CGGCAGCTTTTAGATCTAAT+GGG + chr4_4:8102224-8102243 None:intergenic 40.0%
! TCGGCAGCTTTTAGATCTAA+TGG + chr4_4:8102225-8102244 None:intergenic 40.0%
CCCTTGATTTCATGTTTGGA+TGG - chr4_4:8102250-8102269 Msa0667620:intron 40.0%
ACCATGGATCACGACAAAAT+TGG - chr4_4:8102306-8102325 Msa0667620:intron 40.0%
CCATGGATCACGACAAAATT+GGG - chr4_4:8102307-8102326 Msa0667620:intron 40.0%
TTTATACAGCCGCTAACAAC+AGG - chr4_4:8102367-8102386 Msa0667620:intron 40.0%
GGATACTTTCCTGTTGTTAG+CGG + chr4_4:8102379-8102398 None:intergenic 40.0%
!! AGGAAAGTATCCAGTAAGCT+TGG - chr4_4:8102387-8102406 Msa0667620:intron 40.0%
ACATAAGACACCAAGCTTAC+TGG + chr4_4:8102400-8102419 None:intergenic 40.0%
! AGGAATTGGTTTCGTTGCAT+TGG + chr4_4:8102518-8102537 None:intergenic 40.0%
GATCCAGACTGTATAGGAAT+TGG + chr4_4:8102532-8102551 None:intergenic 40.0%
ATTCCTATACAGTCTGGATC+AGG - chr4_4:8102532-8102551 Msa0667620:intron 40.0%
CTTACCACTCCTAATGAAGA+TGG - chr4_4:8102622-8102641 Msa0667620:intron 40.0%
TATGCCATCTTCATTAGGAG+TGG + chr4_4:8102629-8102648 None:intergenic 40.0%
GGCTATATGTTTGTCCAAAG+GGG - chr4_4:8102844-8102863 Msa0667620:intron 40.0%
!!! TGGTTTTTTGTGTGAAGGCA+AGG - chr4_4:8103361-8103380 Msa0667620:intron 40.0%
AGGCAAGGTGTGAATGTAAA+AGG - chr4_4:8103376-8103395 Msa0667620:intron 40.0%
! ATACTTTGCATGGTCCCTTT+TGG - chr4_4:8103399-8103418 Msa0667620:intron 40.0%
! CCCTTTTGGACAACTTTGAA+TGG - chr4_4:8103413-8103432 Msa0667620:intron 40.0%
AAGAAACTTCCTAAACCACC+GGG + chr4_4:8103518-8103537 None:intergenic 40.0%
CAAGAAACTTCCTAAACCAC+CGG + chr4_4:8103519-8103538 None:intergenic 40.0%
AGCTCACACAGTATTATTGG+TGG + chr4_4:8103580-8103599 None:intergenic 40.0%
!!! GATTGTTTTAGGACGTGGGT+TGG - chr4_4:8094550-8094569 Msa0667620:three_prime_UTR 45.0%
! ATGATGATCCACCGTTGGTT+TGG - chr4_4:8095008-8095027 Msa0667620:CDS 45.0%
!! TGATGATCCACCGTTGGTTT+GGG - chr4_4:8095009-8095028 Msa0667620:CDS 45.0%
!! GCAACAGAGCACTCCATTTT+GGG + chr4_4:8095414-8095433 None:intergenic 45.0%
!! AGCAACAGAGCACTCCATTT+TGG + chr4_4:8095415-8095434 None:intergenic 45.0%
CTTGTTTATCTCCCACTCAG+AGG + chr4_4:8095954-8095973 None:intergenic 45.0%
! ACTTTAGAGAGGATGGGAGA+GGG + chr4_4:8096038-8096057 None:intergenic 45.0%
! AACTTTAGAGAGGATGGGAG+AGG + chr4_4:8096039-8096058 None:intergenic 45.0%
AAAAGGAGAGAGCTGAGAGA+GGG + chr4_4:8096152-8096171 None:intergenic 45.0%
! GGTCTCTTTCTCTTTGAAGG+GGG + chr4_4:8096919-8096938 None:intergenic 45.0%
!! TTGTTTTCGGGGAAAGGTCA+TGG - chr4_4:8097281-8097300 Msa0667620:intron 45.0%
! CGTTCACGATACCGTTTTGT+AGG - chr4_4:8097337-8097356 Msa0667620:CDS 45.0%
CCATTCACTCATAAGAGGAG+GGG + chr4_4:8097583-8097602 None:intergenic 45.0%
GCCATTCACTCATAAGAGGA+GGG + chr4_4:8097584-8097603 None:intergenic 45.0%
TGCCATTCACTCATAAGAGG+AGG + chr4_4:8097585-8097604 None:intergenic 45.0%
GTCTGCCATTCACTCATAAG+AGG + chr4_4:8097588-8097607 None:intergenic 45.0%
TATGAGTGAATGGCAGACGA+AGG - chr4_4:8097590-8097609 Msa0667620:intron 45.0%
ATGAGTGAATGGCAGACGAA+GGG - chr4_4:8097591-8097610 Msa0667620:intron 45.0%
TGAAACTGGACATCCCAACT+AGG + chr4_4:8097636-8097655 None:intergenic 45.0%
GAAGAACATCAGGGTGAAAC+TGG + chr4_4:8097650-8097669 None:intergenic 45.0%
! TGATGATGTCCTTAGCCCTA+GGG - chr4_4:8097681-8097700 Msa0667620:intron 45.0%
GCGTAGCCCTTCATATACAA+GGG - chr4_4:8097704-8097723 Msa0667620:intron 45.0%
CGTAGCCCTTCATATACAAG+GGG - chr4_4:8097705-8097724 Msa0667620:intron 45.0%
GGCTACCCCTTGTATATGAA+GGG + chr4_4:8097713-8097732 None:intergenic 45.0%
AGGCTACCCCTTGTATATGA+AGG + chr4_4:8097714-8097733 None:intergenic 45.0%
TCATATACAAGGGGTAGCCT+TGG - chr4_4:8097714-8097733 Msa0667620:intron 45.0%
CCAAGAACTCCTCGATAGAA+TGG + chr4_4:8098536-8098555 None:intergenic 45.0%
CCATTCTATCGAGGAGTTCT+TGG - chr4_4:8098533-8098552 Msa0667620:intron 45.0%
TCTATCGAGGAGTTCTTGGA+TGG - chr4_4:8098537-8098556 Msa0667620:intron 45.0%
! GCTAAATCGGAGCAGTTTTC+CGG - chr4_4:8098893-8098912 Msa0667620:intron 45.0%
!! GAAGGTGCTGTACATGAAGA+CGG - chr4_4:8099760-8099779 Msa0667620:intron 45.0%
CATGAAGACGGAAGAGGAAT+TGG - chr4_4:8099772-8099791 Msa0667620:intron 45.0%
ACGGAAGAGGAATTGGTACA+TGG - chr4_4:8099779-8099798 Msa0667620:intron 45.0%
CGGAAGAGGAATTGGTACAT+GGG - chr4_4:8099780-8099799 Msa0667620:intron 45.0%
TTGTGGCCTATCCACTAACT+AGG + chr4_4:8099884-8099903 None:intergenic 45.0%
CATGACCACACCTAATTGGT+AGG - chr4_4:8099917-8099936 Msa0667620:intron 45.0%
CACTACCTACCAATTAGGTG+TGG + chr4_4:8099925-8099944 None:intergenic 45.0%
CACACCTAATTGGTAGGTAG+TGG - chr4_4:8099923-8099942 Msa0667620:intron 45.0%
! ACCTAATTGGTAGGTAGTGG+TGG - chr4_4:8099926-8099945 Msa0667620:intron 45.0%
ACCACCACTACCTACCAATT+AGG + chr4_4:8099930-8099949 None:intergenic 45.0%
!! AATGGTGGTGTTGGTTTGCA+TGG - chr4_4:8099963-8099982 Msa0667620:intron 45.0%
! GAGGGTATGAGTAGCTGAAT+AGG + chr4_4:8100100-8100119 None:intergenic 45.0%
AACTCTAATGCCACTCCATG+TGG - chr4_4:8100444-8100463 Msa0667620:intron 45.0%
ACTGCATACAGGGATGGTAA+AGG - chr4_4:8100513-8100532 Msa0667620:intron 45.0%
CATACAGGGATGGTAAAGGA+TGG - chr4_4:8100517-8100536 Msa0667620:intron 45.0%
GATTCTCCATATCTTGGCCA+AGG - chr4_4:8100838-8100857 Msa0667620:intron 45.0%
GCAGAAGGAAAACTAAGTGG+CGG - chr4_4:8100958-8100977 Msa0667620:intron 45.0%
GGGGAAGATCCCAATGAAAA+AGG + chr4_4:8101152-8101171 None:intergenic 45.0%
! TTTTCATTGGGATCTTCCCC+AGG - chr4_4:8101152-8101171 Msa0667620:intron 45.0%
TACTCATCTTGTAAGGCCTG+GGG + chr4_4:8101171-8101190 None:intergenic 45.0%
CATACTCATCTTGTAAGGCC+TGG + chr4_4:8101173-8101192 None:intergenic 45.0%
CAGGCCTTACAAGATGAGTA+TGG - chr4_4:8101171-8101190 Msa0667620:intron 45.0%
GCCTTACAAGATGAGTATGG+AGG - chr4_4:8101174-8101193 Msa0667620:intron 45.0%
GCCTCCATACTCATCTTGTA+AGG + chr4_4:8101178-8101197 None:intergenic 45.0%
CCAAACAAAGCCTGAGTGTA+TGG + chr4_4:8101329-8101348 None:intergenic 45.0%
!! CCATACACTCAGGCTTTGTT+TGG - chr4_4:8101326-8101345 Msa0667620:intron 45.0%
!! TCAGGCTTTGTTTGGGAGTT+TGG - chr4_4:8101334-8101353 Msa0667620:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr4_4:8101338-8101357 Msa0667620:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr4_4:8101339-8101358 Msa0667620:intron 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG - chr4_4:8101367-8101386 Msa0667620:intron 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG - chr4_4:8101380-8101399 Msa0667620:intron 45.0%
AAAAAGGAAGGAGCAAGTGG+AGG - chr4_4:8101383-8101402 Msa0667620:intron 45.0%
AAAAGGAAGGAGCAAGTGGA+GGG - chr4_4:8101384-8101403 Msa0667620:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr4_4:8101339-8101358 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr4_4:8101338-8101357 None:intergenic 45.0%
!! TGAGGCTTTGTTTGGGAGTT+TGG + chr4_4:8101608-8101627 None:intergenic 45.0%
! AGCAAGAAGTTGGTTGTGTG+TGG + chr4_4:8102100-8102119 None:intergenic 45.0%
!! CATGAAATCAAGGGCGTCTT+CGG + chr4_4:8102244-8102263 None:intergenic 45.0%
GACGCCCTTGATTTCATGTT+TGG - chr4_4:8102246-8102265 Msa0667620:intron 45.0%
GACCGTTTCTACAACAACCA+TGG - chr4_4:8102290-8102309 Msa0667620:intron 45.0%
! CCCAATTTTGTCGTGATCCA+TGG + chr4_4:8102310-8102329 None:intergenic 45.0%
! GCAGTGAACGTTGGTAAATC+TGG + chr4_4:8102424-8102443 None:intergenic 45.0%
ATGGGACATACATTGGAGCA+TGG - chr4_4:8102738-8102757 Msa0667620:intron 45.0%
TGGGACATACATTGGAGCAT+GGG - chr4_4:8102739-8102758 Msa0667620:intron 45.0%
AATATGTGCAGGCTGCAACT+TGG - chr4_4:8102823-8102842 Msa0667620:intron 45.0%
TGTTTGTCCAAAGGGGATTC+AGG - chr4_4:8102851-8102870 Msa0667620:intron 45.0%
GGACCTACTGTTGTACACAA+AGG - chr4_4:8102872-8102891 Msa0667620:intron 45.0%
TCCTACACTATCACTCGAAG+AGG - chr4_4:8103172-8103191 Msa0667620:intron 45.0%
! CGAGATACATGGGGTGATTT+TGG + chr4_4:8103777-8103796 None:intergenic 45.0%
GTGTGTTTGTCGCATTTGTG+TGG - chr4_4:8103888-8103907 Msa0667620:intron 45.0%
! TTGCCTTTCTTGTTTCGCTC+AGG - chr4_4:8103917-8103936 Msa0667620:intron 45.0%
AGACCTGAGCGAAACAAGAA+AGG + chr4_4:8103923-8103942 None:intergenic 45.0%
! TTCTTGTTTCGCTCAGGTCT+TGG - chr4_4:8103923-8103942 Msa0667620:intron 45.0%
!!! TATTATTTTTCATTATTTTT+AGG - chr4_4:8094810-8094829 Msa0667620:intron 5.0%
!!! ATTATTTTTCATTATTTTTA+GGG - chr4_4:8094811-8094830 Msa0667620:intron 5.0%
!! TATTGTAAATAAATAAATAA+AGG + chr4_4:8096724-8096743 None:intergenic 5.0%
!!! TTTATTTTTTTATTTATAGT+TGG - chr4_4:8098401-8098420 Msa0667620:CDS 5.0%
!! ATTTAAATGAAAAAAAAATT+GGG + chr4_4:8098466-8098485 None:intergenic 5.0%
!!! TATAATTTTTATTTAAGAAA+TGG + chr4_4:8099438-8099457 None:intergenic 5.0%
!!! AAAATTATTTGATTTATTTA+AGG + chr4_4:8100657-8100676 None:intergenic 5.0%
! TCATTGTTTGGGACTGCCGT+GGG + chr4_4:8094232-8094251 None:intergenic 50.0%
! AGGTGAAGCACCTAGCATTG+TGG + chr4_4:8095102-8095121 None:intergenic 50.0%
!!! TTTTTCCTGAGGTGCTGGGT+TGG - chr4_4:8095314-8095333 Msa0667620:CDS 50.0%
! ATGGAGTGCTCTGTTGCTGA+TGG - chr4_4:8095417-8095436 Msa0667620:intron 50.0%
AAAGGAGAGAGCTGAGAGAG+GGG + chr4_4:8096151-8096170 None:intergenic 50.0%
CAAAAGGAGAGAGCTGAGAG+AGG + chr4_4:8096153-8096172 None:intergenic 50.0%
! CTCTTTCTCTTTGAAGGGGG+TGG + chr4_4:8096916-8096935 None:intergenic 50.0%
TCGTCAAGTACGGTGCAATC+AGG - chr4_4:8096952-8096971 Msa0667620:intron 50.0%
TCACTCATAAGAGGAGGGGT+GGG + chr4_4:8097579-8097598 None:intergenic 50.0%
TTCACTCATAAGAGGAGGGG+TGG + chr4_4:8097580-8097599 None:intergenic 50.0%
CCCCTCCTCTTATGAGTGAA+TGG - chr4_4:8097580-8097599 Msa0667620:intron 50.0%
GCAGACGAAGGGAGTTTCTT+GGG - chr4_4:8097602-8097621 Msa0667620:intron 50.0%
CAGACGAAGGGAGTTTCTTG+GGG - chr4_4:8097603-8097622 Msa0667620:intron 50.0%
AGACGAAGGGAGTTTCTTGG+GGG - chr4_4:8097604-8097623 Msa0667620:intron 50.0%
ACTGGACATCCCAACTAGGT+CGG + chr4_4:8097632-8097651 None:intergenic 50.0%
! GTGATGATGTCCTTAGCCCT+AGG - chr4_4:8097680-8097699 Msa0667620:intron 50.0%
GATGATGTCCTTAGCCCTAG+GGG - chr4_4:8097682-8097701 Msa0667620:intron 50.0%
GGCGTAGCCCTTCATATACA+AGG - chr4_4:8097703-8097722 Msa0667620:intron 50.0%
TCGACAACCCCATTCTATCG+AGG - chr4_4:8098524-8098543 Msa0667620:intron 50.0%
! AATCGGAGCAGTTTTCCGGA+AGG - chr4_4:8098897-8098916 Msa0667620:intron 50.0%
!! TACTGGCTCCTCCAATTACC+AGG - chr4_4:8098932-8098951 Msa0667620:intron 50.0%
! GTAAGAGGAGGCACAACACT+TGG - chr4_4:8099284-8099303 Msa0667620:CDS 50.0%
! GGAGGCACAACACTTGGAAT+AGG - chr4_4:8099290-8099309 Msa0667620:CDS 50.0%
! ACTGACTCTCTCTTTGGCCA+TGG + chr4_4:8099400-8099419 None:intergenic 50.0%
GCTGTACATGAAGACGGAAG+AGG - chr4_4:8099766-8099785 Msa0667620:intron 50.0%
ACACCACCATTGAACCACCT+GGG + chr4_4:8099954-8099973 None:intergenic 50.0%
AACACCACCATTGAACCACC+TGG + chr4_4:8099955-8099974 None:intergenic 50.0%
! AGGTGGTTCAATGGTGGTGT+TGG - chr4_4:8099954-8099973 Msa0667620:intron 50.0%
ATGCCACTCCATGTGGCTAA+TGG - chr4_4:8100451-8100470 Msa0667620:intron 50.0%
TGCCACTCCATGTGGCTAAT+GGG - chr4_4:8100452-8100471 Msa0667620:intron 50.0%
GATTCCACCCATTAGCCACA+TGG + chr4_4:8100462-8100481 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr4_4:8101337-8101356 Msa0667620:intron 50.0%
! AAGGAGCAAGTGGAGGGTTT+TGG - chr4_4:8101390-8101409 Msa0667620:intron 50.0%
! AGGAGCAAGTGGAGGGTTTT+GGG - chr4_4:8101391-8101410 Msa0667620:intron 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG + chr4_4:8101598-8101617 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr4_4:8101337-8101356 None:intergenic 50.0%
CAGCTGCATGAGCAAGAAGT+TGG + chr4_4:8102110-8102129 None:intergenic 50.0%
GATTGCTCTGCAGTGAACGT+TGG + chr4_4:8102433-8102452 None:intergenic 50.0%
! TGCATTGGCAGCATACATGC+TGG + chr4_4:8102503-8102522 None:intergenic 50.0%
CCTATACAGTCTGGATCAGG+CGG - chr4_4:8102535-8102554 Msa0667620:intron 50.0%
AGTAGGTCCTGAATCCCCTT+TGG + chr4_4:8102861-8102880 None:intergenic 50.0%
! GCCTCTTCGAGTGATAGTGT+AGG + chr4_4:8103176-8103195 None:intergenic 50.0%
! GACGGATACACTGTGCGTTT+TGG - chr4_4:8103439-8103458 Msa0667620:intron 50.0%
! CTCATTGTTTGGGACTGCCG+TGG + chr4_4:8094233-8094252 None:intergenic 55.0%
CACGGCAGTCCCAAACAATG+AGG - chr4_4:8094231-8094250 Msa0667620:three_prime_UTR 55.0%
!! AGGTGCTGGGTTGGAGAGAT+TGG - chr4_4:8095323-8095342 Msa0667620:CDS 55.0%
! GGTGCTGGGTTGGAGAGATT+GGG - chr4_4:8095324-8095343 Msa0667620:CDS 55.0%
GCATGACCTAGCGCCCAAAA+TGG - chr4_4:8095398-8095417 Msa0667620:intron 55.0%
! AGCACTCCATTTTGGGCGCT+AGG + chr4_4:8095407-8095426 None:intergenic 55.0%
GGGGAAAGGTCATGGTTGTG+TGG - chr4_4:8097289-8097308 Msa0667620:intron 55.0%
ACTCATAAGAGGAGGGGTGG+GGG + chr4_4:8097577-8097596 None:intergenic 55.0%
CACTCATAAGAGGAGGGGTG+GGG + chr4_4:8097578-8097597 None:intergenic 55.0%
GGCAGACGAAGGGAGTTTCT+TGG - chr4_4:8097601-8097620 Msa0667620:intron 55.0%
TATGAAGGGCTACGCCCCTA+GGG + chr4_4:8097699-8097718 None:intergenic 55.0%
ATATGAAGGGCTACGCCCCT+AGG + chr4_4:8097700-8097719 None:intergenic 55.0%
GTGTTGTGCCTCCTCTTACG+AGG + chr4_4:8099283-8099302 None:intergenic 55.0%
GTGGTTCCCAGGTGGTTCAA+TGG - chr4_4:8099945-8099964 Msa0667620:intron 55.0%
GTTCCCAGGTGGTTCAATGG+TGG - chr4_4:8099948-8099967 Msa0667620:intron 55.0%
!! GGTGGTGTTGGTTTGCATGG+TGG - chr4_4:8099966-8099985 Msa0667620:intron 55.0%
! GTGTGATTTGGACGGTGTCG+TGG - chr4_4:8100007-8100026 Msa0667620:intron 55.0%
!! TGATTTGGACGGTGTCGTGG+TGG - chr4_4:8100010-8100029 Msa0667620:intron 55.0%
CACCCATTAGCCACATGGAG+TGG + chr4_4:8100457-8100476 None:intergenic 55.0%
CACTCCATGTGGCTAATGGG+TGG - chr4_4:8100455-8100474 Msa0667620:intron 55.0%
GGTGCAACTGCATACAGGGA+TGG - chr4_4:8100507-8100526 Msa0667620:intron 55.0%
AGTGGCGGTGTAAACCAAGC+AGG - chr4_4:8100973-8100992 Msa0667620:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr4_4:8101342-8101361 Msa0667620:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr4_4:8101343-8101362 Msa0667620:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr4_4:8101344-8101363 Msa0667620:intron 55.0%
! GGAGCAAGTGGAGGGTTTTG+GGG - chr4_4:8101392-8101411 Msa0667620:intron 55.0%
!! GAGCAAGTGGAGGGTTTTGG+GGG - chr4_4:8101393-8101412 Msa0667620:intron 55.0%
!!! AGCAAGTGGAGGGTTTTGGG+GGG - chr4_4:8101394-8101413 Msa0667620:intron 55.0%
!!! TGGAGGGTTTTGGGGGGTTA+TGG - chr4_4:8101400-8101419 Msa0667620:intron 55.0%
!!! AGGGTTTTGGGGGGTTATGG+AGG - chr4_4:8101403-8101422 Msa0667620:intron 55.0%
!!! GGGTTTTGGGGGGTTATGGA+GGG - chr4_4:8101404-8101423 Msa0667620:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG + chr4_4:8101343-8101362 None:intergenic 55.0%
! GAAGTTGGTTGTGTGTGGCC+TGG + chr4_4:8102095-8102114 None:intergenic 55.0%
CCGCCTGATCCAGACTGTAT+AGG + chr4_4:8102538-8102557 None:intergenic 55.0%
!! ATCACTCGAAGAGGCGCTCA+TGG - chr4_4:8103181-8103200 Msa0667620:intron 55.0%
TCTCTCCAACCCAGCACCTC+AGG + chr4_4:8095322-8095341 None:intergenic 60.0%
!! TTGGGGGTGCCGACCTAGTT+GGG - chr4_4:8097620-8097639 Msa0667620:CDS 60.0%
! GGTAGGTAGTGGTGGTTCCC+AGG - chr4_4:8099934-8099953 Msa0667620:intron 60.0%
! AGGTAGTGGTGGTTCCCAGG+TGG - chr4_4:8099937-8099956 Msa0667620:intron 60.0%
!! CGGTGTCGTGGTGGAAACTC+TGG - chr4_4:8100019-8100038 Msa0667620:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + chr4_4:8101593-8101612 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG + chr4_4:8101594-8101613 None:intergenic 60.0%
GACACCCTAAGCTCTCTGCC+CGG - chr4_4:8103497-8103516 Msa0667620:intron 60.0%
ACCACCGGGCAGAGAGCTTA+GGG + chr4_4:8103504-8103523 None:intergenic 60.0%
AACCACCGGGCAGAGAGCTT+AGG + chr4_4:8103505-8103524 None:intergenic 60.0%
AGCTCTCTGCCCGGTGGTTT+AGG - chr4_4:8103506-8103525 Msa0667620:intron 60.0%
CGTCCTCCACGTTGCAGATC+TGG - chr4_4:8104004-8104023 Msa0667620:five_prime_UTR 60.0%
CATAAGAGGAGGGGTGGGGG+TGG + chr4_4:8097574-8097593 None:intergenic 65.0%
!! CTTGGGGGTGCCGACCTAGT+TGG - chr4_4:8097619-8097638 Msa0667620:CDS 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG - chr4_4:8101348-8101367 Msa0667620:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG - chr4_4:8101349-8101368 Msa0667620:intron 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG + chr4_4:8101580-8101599 None:intergenic 65.0%
GAAGGGAGGGGAGGGCTTTG+GGG + chr4_4:8101581-8101600 None:intergenic 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG + chr4_4:8101582-8101601 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG + chr4_4:8101589-8101608 None:intergenic 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG + chr4_4:8101590-8101609 None:intergenic 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG + chr4_4:8101595-8101614 None:intergenic 65.0%
! TCTGGATCAGGCGGCGCTGA+CGG - chr4_4:8102544-8102563 Msa0667620:intron 65.0%
ACCCTAAGCTCTCTGCCCGG+TGG - chr4_4:8103500-8103519 Msa0667620:intron 65.0%
GGGCTACGCCCCTAGGGCTA+AGG + chr4_4:8097693-8097712 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG - chr4_4:8101347-8101366 Msa0667620:intron 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG - chr4_4:8101352-8101371 Msa0667620:intron 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG - chr4_4:8101353-8101372 Msa0667620:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG - chr4_4:8101359-8101378 Msa0667620:intron 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG + chr4_4:8101575-8101594 None:intergenic 70.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG + chr4_4:8101579-8101598 None:intergenic 70.0%
GGGAAGGGAGGGGAGGGCTT+TGG + chr4_4:8101583-8101602 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 8094165 8104027 8094165 ID=Msa0667620;Name=Msa0667620
chr4_4 mRNA 8094165 8104027 8094165 ID=Msa0667620-mRNA-1;Parent=Msa0667620;Name=Msa0667620-mRNA-1;_AED=0.14;_eAED=0.14;_QI=83|1|1|1|0.84|0.85|14|466|504
chr4_4 exon 8094165 8094814 8094165 ID=Msa0667620-mRNA-1:exon:2657;Parent=Msa0667620-mRNA-1
chr4_4 exon 8094931 8095039 8094931 ID=Msa0667620-mRNA-1:exon:2656;Parent=Msa0667620-mRNA-1
chr4_4 exon 8095259 8095358 8095259 ID=Msa0667620-mRNA-1:exon:2655;Parent=Msa0667620-mRNA-1
chr4_4 exon 8095432 8095466 8095432 ID=Msa0667620-mRNA-1:exon:2654;Parent=Msa0667620-mRNA-1
chr4_4 exon 8095585 8095826 8095585 ID=Msa0667620-mRNA-1:exon:2653;Parent=Msa0667620-mRNA-1
chr4_4 exon 8095921 8096214 8095921 ID=Msa0667620-mRNA-1:exon:2652;Parent=Msa0667620-mRNA-1
chr4_4 exon 8096975 8097062 8096975 ID=Msa0667620-mRNA-1:exon:2651;Parent=Msa0667620-mRNA-1
chr4_4 exon 8097153 8097230 8097153 ID=Msa0667620-mRNA-1:exon:2650;Parent=Msa0667620-mRNA-1
chr4_4 exon 8097322 8097397 8097322 ID=Msa0667620-mRNA-1:exon:2649;Parent=Msa0667620-mRNA-1
chr4_4 exon 8097610 8097668 8097610 ID=Msa0667620-mRNA-1:exon:2648;Parent=Msa0667620-mRNA-1
chr4_4 exon 8098369 8098435 8098369 ID=Msa0667620-mRNA-1:exon:2647;Parent=Msa0667620-mRNA-1
chr4_4 exon 8099239 8099342 8099239 ID=Msa0667620-mRNA-1:exon:2646;Parent=Msa0667620-mRNA-1
chr4_4 exon 8101219 8101280 8101219 ID=Msa0667620-mRNA-1:exon:2645;Parent=Msa0667620-mRNA-1
chr4_4 exon 8103928 8104027 8103928 ID=Msa0667620-mRNA-1:exon:2644;Parent=Msa0667620-mRNA-1
chr4_4 five_prime_UTR 8103945 8104027 8103945 ID=Msa0667620-mRNA-1:five_prime_utr;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8103928 8103944 8103928 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8101219 8101280 8101219 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8099239 8099342 8099239 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8098369 8098435 8098369 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8097610 8097668 8097610 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8097322 8097397 8097322 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8097153 8097230 8097153 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8096975 8097062 8096975 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8095921 8096214 8095921 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8095585 8095826 8095585 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8095432 8095466 8095432 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8095259 8095358 8095259 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8094931 8095039 8094931 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 CDS 8094631 8094814 8094631 ID=Msa0667620-mRNA-1:cds;Parent=Msa0667620-mRNA-1
chr4_4 three_prime_UTR 8094165 8094630 8094165 ID=Msa0667620-mRNA-1:three_prime_utr;Parent=Msa0667620-mRNA-1
Gene Sequence

>Msa0667620

ATGAGGAATGTGATCAGACCACCCCCTTCAAAGAGAAAGAGACCACATTCGGAAATATCGTCAAGTACGGTGCAATCAGGGGCGGAACCTGTTATTGCCTCTATTTATGCTGACAGTTTTGAGCTAAATCGGAGCAGTTTTCCGGAAGGTTTTGTTTTTGGTACTGGCTCCTCCAATTACCAGTATGAAGGTGCTGTACATGAAGACGGAAGAGGAATTGGTACATGGGATATATTTGCCCATACACCAGGGATGGTAAAGGATGGAAAGAATGCAGATGTAGCTATTGATCACTATCATCGTTATAAGGAAGATGTTCAAATCATGAAGAATATGAATACAGATGCATACAGATTCTCCATATCTTGGCCAAGGATATTGCCAAAAGGAAAACTAAGTGGCGGTGTAAACCAAGCAGGAATCATATTTTACAACAACCTGATCAATGAGCTACTTGCTAATGGTCAAATACCATATGTGACCCTTTTTCATTGGGATCTTCCCCAGGCCTTACAAGATGAGTATGGAGGCTTTGTCAGCACGAATATTTTAGATGATTTTAAGGACTTCGTGGATATATGCTTCAAGGAATTTGGAGACAGAGTAAAGCATTGGGTTACTTTTAATGAGCCATTCTCTTACACTTTGAATACATCAGATTGGTACCAGGCCACACACAACCAACTTCTTGCTCATGCAGCTGTTTTCGAATTGTATAAAACCACATATCAGGCTCAAAATGGTATAATAGGCATTGGATTAAACTCTCACTGGTTTAAACCATACTCAACTGACCCATTAGATCTAAAAGCTGCCGAAGACGCCCTTGATTTCATGTTTGGATGGTTTATACAGCCGCTAACAACAGGAAAGTATCCAGTAAGCTTGGTGTCTTATGTGCCAGATTTACCAACGTTCACTGCAGAGCAATCTAAGAGTCTTATTGGGTCATATGATTTTATTGGAATCAATTACTACACCAGCATGTATGCTGCCAATGCAACGAAACCAATTCCTATACAGTCTGGATCAGGCGGCGCTGACGGTGTCAATAGTGTTTTCAATACTGTTAATGTGACTTTAACAGATAAGAATAAAGATGGGACATACATTGGAGCATGGGCTGCAACTTGGCTATATGTTTGTCCAAAGGGGATTCAGGACCTACTGTTGTACACAAAGGAAAAGTATAACAATCCTACGATTATCATAACAGAAAATGGTATGAATGAAGTCAATGATCCTACACTATCACTCGAAGAGGCGCTCATGGATACTAACAGAATTGATTACTTTTATCGTCATCTATATTATCTTTTATCTGCAATGAGGCAAGGTGTGAATGTAAAAGGATACTTTGCATGGTCCCTTTTGGACAACTTTGAATGGAATGACGGATACACTGTGCGTTTTGGAATTAACTTTGTTGATTATGACAATGATCTTAGAAGACACCCTAAGCTCTCTGCCCGGTGGTTTAGGAAGTTTCTTGAACATAATAGAATTATTGGTTGA
Protein sequence

>Msa0667620

MRNVIRPPPSKRKRPHSEISSSTVQSGAEPVIASIYADSFELNRSSFPEGFVFGTGSSNYQYEGAVHEDGRGIGTWDIFAHTPGMVKDGKNADVAIDHYHRYKEDVQIMKNMNTDAYRFSISWPRILPKGKLSGGVNQAGIIFYNNLINELLANGQIPYVTLFHWDLPQALQDEYGGFVSTNILDDFKDFVDICFKEFGDRVKHWVTFNEPFSYTLNTSDWYQATHNQLLAHAAVFELYKTTYQAQNGIIGIGLNSHWFKPYSTDPLDLKAAEDALDFMFGWFIQPLTTGKYPVSLVSYVPDLPTFTAEQSKSLIGSYDFIGINYYTSMYAANATKPIPIQSGSGGADGVNSVFNTVNVTLTDKNKDGTYIGAWAATWLYVCPKGIQDLLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQGVNVKGYFAWSLLDNFEWNDGYTVRFGINFVDYDNDLRRHPKLSARWFRKFLEHNRIIG*