AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065699


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065699.t1 MTR_1g107380 97.089 481 14 0 1 481 1 481 0.0 965
MS.gene065699.t1 MTR_4g095008 45.860 471 239 4 9 474 7 466 2.14e-155 452
MS.gene065699.t1 MTR_4g094920 46.285 471 237 4 9 474 22 481 9.00e-146 427
MS.gene065699.t1 MTR_5g016480 42.797 472 259 8 9 473 4 471 1.07e-132 392
MS.gene065699.t1 MTR_3g049970 41.509 477 248 12 12 472 8 469 4.33e-118 355
MS.gene065699.t1 MTR_1g032490 41.772 474 253 11 11 472 8 470 1.70e-114 346
MS.gene065699.t1 MTR_8g064870 39.158 475 270 10 9 472 7 473 3.08e-114 345
MS.gene065699.t1 MTR_6g038200 38.528 462 258 8 13 469 11 451 2.30e-113 342
MS.gene065699.t1 MTR_1g107375 40.733 464 255 8 12 472 7 453 1.09e-112 340
MS.gene065699.t1 MTR_6g038220 39.706 476 254 11 1 469 1 450 2.30e-112 340
MS.gene065699.t1 MTR_6g038230 39.177 462 255 9 13 469 11 451 4.21e-112 339
MS.gene065699.t1 MTR_6g038240 38.784 477 263 11 5 474 2 456 4.86e-112 339
MS.gene065699.t1 MTR_7g080935 39.706 476 257 11 4 473 2 453 1.36e-110 335
MS.gene065699.t1 MTR_7g080940 38.494 478 269 10 4 478 2 457 1.50e-110 335
MS.gene065699.t1 MTR_1g107315 40.530 491 256 14 13 480 8 485 3.38e-110 335
MS.gene065699.t1 MTR_8g083290 37.866 478 261 13 14 473 5 464 6.17e-110 333
MS.gene065699.t1 MTR_1g107350 39.662 474 261 11 12 472 7 468 9.15e-110 333
MS.gene065699.t1 MTR_1g107365 40.605 463 258 7 12 472 44 491 5.60e-109 332
MS.gene065699.t1 MTR_8g064880 39.112 473 271 8 12 472 8 475 5.72e-106 324
MS.gene065699.t1 MTR_6g038300 36.134 476 275 10 4 472 2 455 2.56e-105 322
MS.gene065699.t1 MTR_5g035580 36.765 476 270 10 12 481 12 462 2.06e-104 320
MS.gene065699.t1 MTR_7g080950 38.806 469 257 11 11 473 4 448 1.25e-103 317
MS.gene065699.t1 MTR_8g083280 37.759 482 257 14 14 476 8 465 4.19e-103 316
MS.gene065699.t1 MTR_3g084530 35.744 484 270 12 13 472 6 472 2.98e-102 314
MS.gene065699.t1 MTR_5g035560 36.247 469 266 11 12 473 10 452 5.72e-100 309
MS.gene065699.t1 MTR_8g088560 38.034 468 264 9 12 472 9 457 6.69e-100 308
MS.gene065699.t1 MTR_1g107360 37.844 473 263 12 12 472 8 461 7.70e-100 308
MS.gene065699.t1 MTR_3g084540 35.135 481 278 13 13 472 6 473 9.24e-99 305
MS.gene065699.t1 MTR_3g084520 36.042 480 274 12 13 472 6 472 2.05e-98 304
MS.gene065699.t1 MTR_1g107285 37.448 478 279 9 12 481 7 472 4.94e-97 301
MS.gene065699.t1 MTR_7g080900 36.674 469 267 11 12 473 11 456 1.64e-92 288
MS.gene065699.t1 MTR_6g014220 33.264 481 291 14 13 474 10 479 4.59e-81 259
MS.gene065699.t1 MTR_3g008010 32.106 489 286 12 13 474 10 479 1.62e-78 253
MS.gene065699.t1 MTR_6g013960 31.006 487 296 9 13 474 10 481 5.33e-78 252
MS.gene065699.t1 MTR_6g014040 31.174 494 287 13 13 474 10 482 1.39e-77 251
MS.gene065699.t1 MTR_6g014290 31.034 493 286 13 13 474 10 479 9.93e-77 248
MS.gene065699.t1 MTR_6g014250 31.809 481 298 14 13 474 10 479 9.44e-76 246
MS.gene065699.t1 MTR_5g464810 32.568 479 295 10 13 474 12 479 9.76e-76 246
MS.gene065699.t1 MTR_5g064240 32.568 479 295 10 13 474 12 479 9.76e-76 246
MS.gene065699.t1 MTR_6g013450 30.461 499 292 12 9 474 6 482 1.25e-75 246
MS.gene065699.t1 MTR_0036s0220 32.787 488 282 14 13 474 12 479 7.95e-75 243
MS.gene065699.t1 MTR_6g014020 31.138 501 289 14 6 474 5 481 1.73e-74 243
MS.gene065699.t1 MTR_6g014270 30.081 492 296 10 13 474 7 480 8.06e-74 241
MS.gene065699.t1 MTR_8g059425 30.567 494 287 10 13 474 10 479 1.04e-73 241
MS.gene065699.t1 MTR_6g014310 31.337 501 298 14 1 474 1 482 4.54e-73 239
MS.gene065699.t1 MTR_6g014170 32.114 492 266 15 13 474 10 463 1.00e-72 238
MS.gene065699.t1 MTR_6g014187 30.185 487 300 11 13 474 10 481 2.23e-72 237
MS.gene065699.t1 MTR_6g013440 30.629 493 290 12 13 474 11 482 4.56e-72 236
MS.gene065699.t1 MTR_2g008210 30.561 481 302 12 13 474 11 478 5.79e-72 236
MS.gene065699.t1 MTR_5g058320 30.266 489 292 11 8 474 5 466 6.20e-72 235
MS.gene065699.t1 MTR_7g011470 32.000 475 289 11 13 474 10 463 6.80e-72 235
MS.gene065699.t1 MTR_4g094220 31.818 484 288 14 13 469 7 475 6.82e-72 236
MS.gene065699.t1 MTR_7g011470 31.733 479 289 11 13 474 10 467 1.02e-71 235
MS.gene065699.t1 MTR_5g464760 31.070 486 295 11 13 474 12 481 2.55e-70 231
MS.gene065699.t1 MTR_6g014150 30.595 487 298 10 13 474 7 478 7.41e-70 230
MS.gene065699.t1 MTR_0288s0020 30.162 494 272 12 13 474 10 462 1.29e-69 229
MS.gene065699.t1 MTR_6g014200 30.801 487 297 10 13 474 7 478 1.50e-69 229
MS.gene065699.t1 MTR_6g011340 30.800 500 292 12 6 474 5 481 2.28e-69 229
MS.gene065699.t1 MTR_6g014050 31.055 512 285 13 1 474 1 482 2.59e-68 226
MS.gene065699.t1 MTR_3g479520 29.209 493 313 12 3 473 5 483 1.24e-66 222
MS.gene065699.t1 MTR_6g013990 30.785 484 299 13 13 474 10 479 2.63e-66 221
MS.gene065699.t1 MTR_3g479490 29.132 484 309 13 11 473 4 474 4.74e-66 220
MS.gene065699.t1 MTR_6g014300 28.947 494 281 13 13 474 12 467 5.54e-65 217
MS.gene065699.t1 MTR_6g013900 28.257 499 305 11 6 474 5 480 1.66e-64 216
MS.gene065699.t1 MTR_6g014240 28.810 479 291 11 11 474 5 448 3.32e-64 215
MS.gene065699.t1 MTR_3g479470 31.677 483 289 15 13 471 13 478 3.56e-64 216
MS.gene065699.t1 MTR_3g069710 31.447 477 273 13 14 473 13 452 9.38e-64 214
MS.gene065699.t1 MTR_6g013920 28.685 502 305 11 6 477 5 483 1.65e-63 214
MS.gene065699.t1 MTR_7g013220 28.694 467 301 8 13 470 5 448 3.83e-63 212
MS.gene065699.t1 MTR_7g013200 28.510 463 296 8 13 470 5 437 2.64e-62 209
MS.gene065699.t1 MTR_7g013240 29.437 462 290 9 13 469 6 436 6.35e-61 206
MS.gene065699.t1 MTR_7g013260 28.694 467 288 10 13 469 6 437 1.73e-60 204
MS.gene065699.t1 MTR_3g079480 28.195 493 298 13 13 473 21 489 3.60e-60 205
MS.gene065699.t1 MTR_5g031840 30.608 477 294 13 13 472 5 461 1.51e-59 203
MS.gene065699.t1 MTR_5g004940 38.365 318 149 8 177 477 95 382 1.52e-59 201
MS.gene065699.t1 MTR_5g004940 38.384 198 112 5 13 206 17 208 3.81e-33 130
MS.gene065699.t1 MTR_6g014190 33.333 291 184 4 188 474 4 288 9.22e-59 196
MS.gene065699.t1 MTR_7g013180 30.000 470 285 17 13 470 5 442 1.02e-58 200
MS.gene065699.t1 MTR_4g485630 29.817 493 297 15 11 476 7 477 1.00e-57 198
MS.gene065699.t1 MTR_7g070610 28.600 507 306 15 1 472 1 486 2.87e-57 197
MS.gene065699.t1 MTR_5g031830 31.902 489 286 18 7 472 6 470 4.58e-55 191
MS.gene065699.t1 MTR_5g072860 29.774 487 278 16 13 473 18 466 6.50e-55 191
MS.gene065699.t1 MTR_5g075440 27.966 472 304 13 13 473 10 456 1.88e-53 186
MS.gene065699.t1 MTR_5g045970 29.821 503 288 17 12 473 15 493 2.87e-53 187
MS.gene065699.t1 MTR_3g069690 29.661 472 292 15 13 473 8 450 6.08e-53 185
MS.gene065699.t1 MTR_5g031860 31.092 476 294 15 13 472 12 469 8.08e-53 185
MS.gene065699.t1 MTR_7g102550 29.065 492 304 15 13 473 9 486 1.27e-52 185
MS.gene065699.t1 MTR_7g070940 28.571 483 307 15 11 472 7 472 1.36e-52 185
MS.gene065699.t1 MTR_8g066610 28.488 516 297 19 5 480 2 485 3.98e-52 184
MS.gene065699.t1 MTR_3g479610 31.667 300 190 6 182 473 21 313 4.61e-52 179
MS.gene065699.t1 MTR_3g031400 29.114 474 290 14 13 477 18 454 4.88e-52 183
MS.gene065699.t1 MTR_8g009050 34.232 371 202 11 123 468 109 462 7.62e-52 182
MS.gene065699.t1 MTR_8g008990 30.228 483 288 15 12 468 5 464 9.46e-52 182
MS.gene065699.t1 MTR_8g043470 29.288 379 219 6 106 474 40 379 1.47e-51 179
MS.gene065699.t1 MTR_3g031450 28.421 475 294 14 13 477 18 456 1.81e-51 181
MS.gene065699.t1 MTR_4g064987 29.487 468 274 17 22 473 17 444 2.07e-51 181
MS.gene065699.t1 MTR_7g070930 28.834 489 308 15 11 472 12 487 2.31e-51 182
MS.gene065699.t1 MTR_4g064987 29.211 469 280 16 22 473 17 450 4.06e-51 180
MS.gene065699.t1 MTR_7g046490 33.239 355 202 10 135 469 121 460 5.71e-51 180
MS.gene065699.t1 MTR_5g072830 28.092 477 288 14 13 472 10 448 1.65e-50 178
MS.gene065699.t1 MTR_0477s0010 30.717 293 167 2 182 474 62 318 4.16e-50 174
MS.gene065699.t1 MTR_6g033725 30.682 352 212 10 135 470 124 459 5.20e-50 177
MS.gene065699.t1 MTR_6g033625 28.571 469 294 14 14 461 5 453 6.00e-50 177
MS.gene065699.t1 MTR_8g007585 38.278 209 125 1 266 474 189 393 6.94e-50 175
MS.gene065699.t1 MTR_5g072810 28.602 472 295 15 13 472 12 453 7.25e-50 177
MS.gene065699.t1 MTR_7g055710 27.218 496 318 15 4 471 2 482 1.12e-49 177
MS.gene065699.t1 MTR_8g009073 30.550 491 272 17 12 468 5 460 1.21e-49 176
MS.gene065699.t1 MTR_8g009055 38.491 265 134 6 223 468 208 462 1.42e-49 176
MS.gene065699.t1 MTR_7g117405 28.457 499 290 18 13 473 12 481 2.23e-49 176
MS.gene065699.t1 MTR_7g071040 27.607 489 314 15 11 472 15 490 3.23e-49 176
MS.gene065699.t1 MTR_5g072840 28.361 476 290 14 13 473 10 449 3.23e-49 175
MS.gene065699.t1 MTR_0536s0020 28.425 489 296 12 14 474 19 481 4.66e-49 175
MS.gene065699.t1 MTR_6g033675 26.446 484 289 13 21 470 12 462 5.91e-49 175
MS.gene065699.t1 MTR_6g014186 26.078 487 282 12 13 474 7 440 8.61e-49 173
MS.gene065699.t1 MTR_0891s0010 29.932 294 191 6 188 473 4 290 1.22e-48 169
MS.gene065699.t1 MTR_8g009067 31.054 351 212 7 137 469 5 343 1.61e-48 171
MS.gene065699.t1 MTR_8g009063 29.339 484 289 17 12 468 12 469 1.70e-48 174
MS.gene065699.t1 MTR_7g070800 28.340 494 306 16 8 472 1 475 1.76e-48 174
MS.gene065699.t1 MTR_7g047030 27.755 490 295 19 13 472 6 466 2.05e-48 173
MS.gene065699.t1 MTR_7g047270 27.755 490 295 19 13 472 6 466 2.05e-48 173
MS.gene065699.t1 MTR_4g117960 28.427 496 311 13 4 472 2 480 2.35e-48 173
MS.gene065699.t1 MTR_8g009067 30.623 369 218 8 127 469 105 461 2.59e-48 173
MS.gene065699.t1 MTR_7g070910 27.092 502 314 14 4 472 2 484 4.77e-48 173
MS.gene065699.t1 MTR_8g027885 33.152 368 206 12 120 465 116 465 7.94e-48 172
MS.gene065699.t1 MTR_8g012650 30.851 376 220 12 123 472 110 471 8.06e-48 172
MS.gene065699.t1 MTR_6g033660 26.947 475 311 12 14 470 5 461 8.86e-48 172
MS.gene065699.t1 MTR_5g072820 28.330 473 292 14 13 472 10 448 1.12e-47 171
MS.gene065699.t1 MTR_0184s0030 29.508 366 232 7 123 472 112 467 1.46e-47 171
MS.gene065699.t1 MTR_5g090660 26.869 495 300 14 14 473 6 473 2.68e-47 172
MS.gene065699.t1 MTR_1g019510 29.745 353 213 9 137 469 123 460 3.28e-47 170
MS.gene065699.t1 MTR_7g070780 26.955 486 318 13 12 472 10 483 3.36e-47 171
MS.gene065699.t1 MTR_8g009073 35.740 277 151 6 210 469 66 332 3.48e-47 166
MS.gene065699.t1 MTR_4g031800 29.495 495 292 19 6 470 3 470 5.43e-47 169
MS.gene065699.t1 MTR_2g059240 27.869 488 320 11 1 474 1 470 5.87e-47 169
MS.gene065699.t1 MTR_4g117980 28.715 498 308 16 4 472 2 481 8.13e-47 169
MS.gene065699.t1 MTR_8g027870 31.818 374 203 11 120 465 116 465 1.35e-46 168
MS.gene065699.t1 MTR_7g070660 26.908 498 301 17 11 472 9 479 1.55e-46 169
MS.gene065699.t1 MTR_5g090670 26.518 494 307 14 14 473 6 477 2.61e-46 167
MS.gene065699.t1 MTR_8g465670 30.670 388 216 11 113 469 102 467 2.73e-46 167
MS.gene065699.t1 MTR_7g070810 25.620 484 323 14 11 472 7 475 2.79e-46 168
MS.gene065699.t1 MTR_4g024020 28.797 507 298 20 8 473 4 488 2.88e-46 168
MS.gene065699.t1 MTR_7g070740 26.694 487 320 13 11 472 9 483 3.26e-46 168
MS.gene065699.t1 MTR_0184s0040 27.310 487 300 12 12 471 20 479 3.80e-46 167
MS.gene065699.t1 MTR_0078s0190 27.310 487 300 12 12 471 20 479 3.80e-46 167
MS.gene065699.t1 MTR_4g108250 25.904 498 314 15 11 472 9 487 5.19e-46 167
MS.gene065699.t1 MTR_6g023665 31.507 365 214 11 122 465 115 464 7.46e-46 166
MS.gene065699.t1 MTR_4g128690 28.298 470 291 13 12 469 14 449 9.32e-46 166
MS.gene065699.t1 MTR_7g117170 27.419 496 299 15 1 465 3 468 9.86e-46 166
MS.gene065699.t1 MTR_7g102560 27.856 499 305 15 10 473 6 484 1.96e-45 166
MS.gene065699.t1 MTR_7g102460 28.599 514 297 23 1 473 1 485 2.49e-45 166
MS.gene065699.t1 MTR_7g102450 28.571 483 302 17 13 473 11 472 2.52e-45 165
MS.gene065699.t1 MTR_7g070860 27.310 487 300 15 11 472 5 462 2.68e-45 165
MS.gene065699.t1 MTR_0078s0010 26.380 489 303 17 13 472 6 466 3.10e-45 164
MS.gene065699.t1 MTR_8g006260 30.871 379 200 13 120 463 109 460 4.51e-45 164
MS.gene065699.t1 MTR_8g012635 29.793 386 237 10 106 468 93 467 1.29e-44 163
MS.gene065699.t1 MTR_5g098930 28.571 392 228 10 116 473 95 468 1.33e-44 163
MS.gene065699.t1 MTR_8g012630 40.670 209 108 4 276 468 203 411 2.13e-44 161
MS.gene065699.t1 MTR_8g077590 29.539 369 219 10 123 468 112 462 2.64e-44 162
MS.gene065699.t1 MTR_7g102490 28.952 525 304 23 1 480 1 501 2.67e-44 162
MS.gene065699.t1 MTR_1g062380 27.823 496 308 17 12 473 15 494 4.51e-44 162
MS.gene065699.t1 MTR_4g485620 30.811 370 228 12 121 472 95 454 6.87e-44 160
MS.gene065699.t1 MTR_5g090700 27.179 390 232 12 117 473 107 477 7.06e-44 161
MS.gene065699.t1 MTR_2g034990 26.775 493 324 11 4 472 2 481 7.21e-44 161
MS.gene065699.t1 MTR_6g035185 26.465 495 324 12 4 472 2 482 7.84e-44 161
MS.gene065699.t1 MTR_2g035020 26.962 497 318 12 4 472 2 481 7.88e-44 161
MS.gene065699.t1 MTR_4g118000 28.364 483 289 13 16 472 15 466 1.28e-43 160
MS.gene065699.t1 MTR_8g006730 33.333 309 179 8 173 465 162 459 1.35e-43 160
MS.gene065699.t1 MTR_8g008970 29.539 369 222 8 127 469 105 461 1.42e-43 164
MS.gene065699.t1 MTR_8g008970 35.401 274 156 7 203 468 524 784 1.33e-38 150
MS.gene065699.t1 MTR_5g087620 28.850 513 303 23 3 473 2 494 1.76e-43 160
MS.gene065699.t1 MTR_5g070090 29.950 404 236 14 89 472 85 461 1.86e-43 159
MS.gene065699.t1 MTR_6g488280 30.357 392 240 11 92 465 81 457 1.98e-43 159
MS.gene065699.t1 MTR_0428s0010 30.357 392 240 11 92 465 81 457 1.98e-43 159
MS.gene065699.t1 MTR_2g098430 29.470 509 285 22 14 480 7 483 3.25e-43 159
MS.gene065699.t1 MTR_6g033615 28.919 370 218 12 113 461 94 439 3.76e-43 159
MS.gene065699.t1 MTR_5g090610 28.989 376 217 11 123 472 109 460 3.86e-43 159
MS.gene065699.t1 MTR_3g009510 28.250 400 234 11 109 469 88 473 4.85e-43 159
MS.gene065699.t1 MTR_4g117950 26.899 487 301 14 12 472 5 462 1.11e-42 157
MS.gene065699.t1 MTR_5g045960 27.381 504 299 16 12 473 8 486 1.49e-42 157
MS.gene065699.t1 MTR_4g485590 30.073 409 236 13 13 409 9 379 1.61e-42 155
MS.gene065699.t1 MTR_4g128720 26.695 472 301 13 11 469 13 452 1.79e-42 157
MS.gene065699.t1 MTR_6g035265 29.708 377 217 11 126 472 115 473 1.82e-42 157
MS.gene065699.t1 MTR_7g012120 26.962 497 309 13 7 472 10 483 2.11e-42 157
MS.gene065699.t1 MTR_5g098960 25.887 479 313 15 14 481 8 455 2.13e-42 156
MS.gene065699.t1 MTR_2g035040 29.570 372 229 9 125 472 24 386 2.61e-42 155
MS.gene065699.t1 MTR_8g012745 33.441 311 171 11 180 468 168 464 2.85e-42 157
MS.gene065699.t1 MTR_1g019520 36.667 210 118 3 276 471 3 211 3.64e-42 149
MS.gene065699.t1 MTR_8g006220 34.839 310 162 7 188 469 178 475 3.89e-42 156
MS.gene065699.t1 MTR_7g102520 28.313 498 308 20 11 475 10 491 1.17e-41 155
MS.gene065699.t1 MTR_5g029800 26.559 497 316 13 4 472 2 477 1.49e-41 155
MS.gene065699.t1 MTR_0536s0010 25.971 489 322 11 2 472 10 476 1.66e-41 155
MS.gene065699.t1 MTR_4g117890 26.104 498 313 13 1 470 2 472 1.98e-41 154
MS.gene065699.t1 MTR_0078s0060 27.140 479 290 16 12 460 5 454 3.56e-41 153
MS.gene065699.t1 MTR_8g006710 34.783 276 155 6 212 472 200 465 3.78e-41 153
MS.gene065699.t1 MTR_5g090580 24.847 491 317 13 14 473 6 475 1.53e-40 152
MS.gene065699.t1 MTR_8g012730 39.320 206 109 4 279 468 99 304 1.66e-40 148
MS.gene065699.t1 MTR_5g090620 25.852 499 303 16 14 473 6 476 1.78e-40 152
MS.gene065699.t1 MTR_5g090630 25.553 497 299 15 13 473 5 466 2.66e-40 151
MS.gene065699.t1 MTR_5g067170 26.501 483 312 11 16 472 14 479 2.75e-40 151
MS.gene065699.t1 MTR_4g082820 28.310 491 283 19 12 469 6 460 4.43e-40 150
MS.gene065699.t1 MTR_1g029540 32.340 235 142 5 248 472 232 459 6.24e-40 150
MS.gene065699.t1 MTR_8g006270 29.867 375 221 12 120 469 103 460 6.48e-40 150
MS.gene065699.t1 MTR_4g008630 24.390 492 305 17 9 472 10 462 9.51e-40 149
MS.gene065699.t1 MTR_5g090600 26.615 387 231 11 111 473 97 454 1.38e-39 149
MS.gene065699.t1 MTR_2g040530 27.427 412 247 14 91 472 75 464 1.57e-39 149
MS.gene065699.t1 MTR_4g485640 31.319 364 221 12 126 469 309 663 2.18e-39 151
MS.gene065699.t1 MTR_6g005600 29.945 364 219 9 120 461 107 456 2.42e-39 149
MS.gene065699.t1 MTR_7g071050 25.210 476 285 12 1 457 1 424 2.57e-39 147
MS.gene065699.t1 MTR_5g016660 25.800 500 321 14 5 472 2 483 3.35e-39 148
MS.gene065699.t1 MTR_0009s0240 28.512 477 299 14 13 472 7 458 4.02e-39 148
MS.gene065699.t1 MTR_2g046750 26.423 492 303 17 11 472 3 465 4.77e-39 147
MS.gene065699.t1 MTR_5g040030 24.797 492 322 15 12 472 13 487 9.61e-39 147
MS.gene065699.t1 MTR_6g013680 28.392 398 198 11 106 474 37 376 1.24e-38 144
MS.gene065699.t1 MTR_2g046820 27.073 410 249 13 91 472 75 462 1.77e-38 146
MS.gene065699.t1 MTR_7g070870 25.208 480 303 15 11 472 17 458 4.04e-38 145
MS.gene065699.t1 MTR_5g072850 30.671 313 181 9 170 478 107 387 7.22e-37 140
MS.gene065699.t1 MTR_8g466240 25.309 486 303 14 10 472 5 453 8.13e-37 141
MS.gene065699.t1 MTR_1g107340 36.364 242 147 5 12 250 7 244 1.47e-36 135
MS.gene065699.t1 MTR_1g040310 26.719 509 310 21 1 472 1 483 1.63e-36 141
MS.gene065699.t1 MTR_2086s0010 35.227 176 109 2 299 473 1 172 1.68e-36 133
MS.gene065699.t1 MTR_1996s0010 35.227 176 109 2 299 473 1 172 1.68e-36 133
MS.gene065699.t1 MTR_8g032950 25.562 489 317 12 12 472 11 480 3.21e-36 140
MS.gene065699.t1 MTR_5g070040 35.424 271 145 10 221 475 213 469 4.50e-36 139
MS.gene065699.t1 MTR_8g090095 33.014 209 127 4 277 472 271 479 6.71e-36 139
MS.gene065699.t1 MTR_4g082810 28.230 418 244 15 12 401 6 395 7.85e-36 137
MS.gene065699.t1 MTR_1g107325 48.507 134 67 1 341 472 219 352 8.25e-36 136
MS.gene065699.t1 MTR_1g107325 28.824 170 113 5 124 289 62 227 2.39e-15 77.8
MS.gene065699.t1 MTR_6g078320 26.233 507 309 17 1 471 1 478 1.06e-35 139
MS.gene065699.t1 MTR_5g066390 38.509 161 95 1 313 473 59 215 1.07e-35 132
MS.gene065699.t1 MTR_6g014160 26.777 422 191 14 81 474 63 394 1.43e-35 136
MS.gene065699.t1 MTR_8g071070 26.250 480 314 12 11 469 5 465 8.67e-35 136
MS.gene065699.t1 MTR_8g044140 27.882 373 232 12 126 472 87 448 8.76e-35 135
MS.gene065699.t1 MTR_6g014185 32.031 256 132 9 223 473 127 345 1.39e-34 133
MS.gene065699.t1 MTR_5g019580 24.118 510 325 14 8 480 2 486 1.90e-34 135
MS.gene065699.t1 MTR_5g019580 23.866 507 306 15 6 480 52 510 5.57e-34 134
MS.gene065699.t1 MTR_5g039900 24.082 490 325 13 12 472 12 483 1.78e-33 132
MS.gene065699.t1 MTR_7g080960 33.333 228 99 5 248 473 295 471 2.74e-33 132
MS.gene065699.t1 MTR_7g080960 33.051 236 132 7 12 241 11 226 1.89e-27 115
MS.gene065699.t1 MTR_7g470610 37.306 193 115 3 223 409 75 267 2.85e-33 127
MS.gene065699.t1 MTR_7g070583 37.306 193 115 3 223 409 75 267 2.85e-33 127
MS.gene065699.t1 MTR_8g074550 26.358 497 291 20 13 461 8 477 1.09e-32 130
MS.gene065699.t1 MTR_6g035295 26.423 492 313 17 12 472 11 484 3.08e-32 129
MS.gene065699.t1 MTR_3g009490 34.973 183 103 4 303 469 3 185 3.51e-31 119
MS.gene065699.t1 MTR_7g067330 30.686 277 161 11 210 476 176 431 3.91e-30 122
MS.gene065699.t1 MTR_6g042310 24.798 496 304 17 12 481 17 469 6.18e-30 122
MS.gene065699.t1 MTR_8g009840 35.079 191 106 3 294 468 333 521 9.17e-30 122
MS.gene065699.t1 MTR_7g039550 29.119 261 169 5 227 472 2 261 3.60e-29 116
MS.gene065699.t1 MTR_4g123553 25.708 459 299 16 3 447 6 436 5.84e-29 119
MS.gene065699.t1 MTR_7g067120 30.417 240 143 9 245 481 216 434 1.25e-28 117
MS.gene065699.t1 MTR_8g068360 26.782 463 283 15 12 448 11 443 4.33e-28 117
MS.gene065699.t1 MTR_8g068340 25.806 465 286 13 12 448 11 444 2.29e-27 114
MS.gene065699.t1 MTR_2g008226 24.477 478 292 16 5 447 2 445 2.36e-27 114
MS.gene065699.t1 MTR_6g014000 40.000 125 71 1 344 468 31 151 5.52e-27 114
MS.gene065699.t1 MTR_2g046620 27.757 263 175 8 223 481 216 467 9.17e-27 113
MS.gene065699.t1 MTR_2g008225 25.478 471 290 17 3 447 6 441 9.50e-27 113
MS.gene065699.t1 MTR_2g008220 31.739 230 142 7 224 447 220 440 2.10e-26 112
MS.gene065699.t1 MTR_6g013890 27.586 261 125 7 182 438 40 240 9.39e-26 106
MS.gene065699.t1 MTR_7g070760 32.536 209 115 3 213 418 23 208 1.15e-25 104
MS.gene065699.t1 MTR_8g068330 35.429 175 108 4 278 448 267 440 1.65e-25 109
MS.gene065699.t1 MTR_6g036650 24.449 499 309 19 12 481 17 476 2.66e-25 108
MS.gene065699.t1 MTR_5g027210 24.109 477 275 16 14 435 5 449 8.11e-25 107
MS.gene065699.t1 MTR_6g013435 23.810 336 198 9 147 474 23 308 1.33e-24 104
MS.gene065699.t1 MTR_5g090690 26.685 356 189 12 123 461 69 369 4.39e-24 103
MS.gene065699.t1 MTR_4g077960 28.384 229 153 7 224 448 193 414 1.67e-22 100
MS.gene065699.t1 MTR_8g056740 36.126 191 113 6 223 409 114 299 2.95e-22 99.0
MS.gene065699.t1 MTR_4g059370 30.435 230 138 7 212 432 133 349 5.65e-22 98.2
MS.gene065699.t1 MTR_8g007565 27.668 253 169 6 221 469 213 455 1.96e-21 97.1
MS.gene065699.t1 MTR_7g070995 31.944 144 88 2 339 472 1 144 2.47e-21 90.9
MS.gene065699.t1 MTR_8g007650 27.668 253 169 6 221 469 213 455 3.84e-21 96.3
MS.gene065699.t1 MTR_0536s0030 33.333 162 90 5 329 472 190 351 4.05e-21 95.1
MS.gene065699.t1 MTR_3g435310 27.317 205 140 5 279 481 228 425 5.06e-20 92.4
MS.gene065699.t1 MTR_5g066410 28.378 222 140 7 221 430 185 399 1.83e-19 91.3
MS.gene065699.t1 MTR_1g090270 26.809 235 149 7 212 436 206 427 5.16e-18 86.7
MS.gene065699.t1 MTR_4g079270 29.032 217 137 8 230 441 220 424 2.43e-17 84.7
MS.gene065699.t1 MTR_2g014900 29.016 193 123 5 271 459 250 432 4.52e-17 84.0
MS.gene065699.t1 MTR_4g079250 28.161 174 121 3 279 448 261 434 1.31e-16 82.4
MS.gene065699.t1 MTR_2g083430 23.667 469 289 21 10 448 5 434 2.89e-15 78.2
MS.gene065699.t1 MTR_6g052375 26.948 308 148 12 175 465 21 268 3.57e-15 76.6
MS.gene065699.t1 MTR_8g083300 30.612 147 86 4 14 157 8 141 8.43e-15 72.4
MS.gene065699.t1 MTR_1g090280 28.972 107 74 2 334 438 172 278 3.18e-11 64.7
MS.gene065699.t1 MTR_2g083420 27.273 220 115 10 230 442 220 401 3.52e-11 65.5
MS.gene065699.t1 MTR_0184s0010 32.222 90 61 0 382 471 4 93 3.88e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065699.t1 AT2G23250 45.336 461 228 9 16 475 1 438 3.30e-135 397
MS.gene065699.t1 AT2G23260 44.492 472 232 10 11 475 8 456 6.94e-135 397
MS.gene065699.t1 AT4G15490 40.710 479 255 9 13 477 8 471 8.89e-123 367
MS.gene065699.t1 AT3G21560 40.638 470 260 9 13 472 12 472 1.60e-121 364
MS.gene065699.t1 AT4G15480 39.400 467 271 7 12 472 18 478 7.83e-120 360
MS.gene065699.t1 AT4G15500 40.860 465 261 5 13 473 9 463 1.57e-118 356
MS.gene065699.t1 AT1G05680 35.853 463 272 8 13 469 6 449 9.21e-104 317
MS.gene065699.t1 AT1G05675 37.229 462 267 9 13 469 6 449 3.05e-103 316
MS.gene065699.t1 AT2G31750 36.017 472 275 11 9 473 4 455 1.05e-97 302
MS.gene065699.t1 AT4G15550 37.053 475 268 11 13 471 13 472 1.14e-97 302
MS.gene065699.t1 AT2G31750 36.076 474 276 11 9 475 4 457 2.45e-97 302
MS.gene065699.t1 AT2G31790 36.052 466 269 10 13 469 8 453 2.38e-96 298
MS.gene065699.t1 AT4G14090 37.100 469 258 14 13 471 13 454 5.36e-96 298
MS.gene065699.t1 AT2G43820 37.100 469 257 12 13 472 7 446 1.92e-94 293
MS.gene065699.t1 AT2G43840 34.322 472 270 13 13 474 7 448 1.65e-93 291
MS.gene065699.t1 AT2G43840 34.110 472 271 13 13 474 7 448 2.39e-92 288
MS.gene065699.t1 AT1G05530 34.664 476 271 12 13 473 5 455 1.13e-90 284
MS.gene065699.t1 AT1G05560 34.025 482 277 13 13 480 5 459 4.33e-89 280
MS.gene065699.t1 AT1G05560 34.025 482 277 13 13 480 55 509 1.33e-88 280
MS.gene065699.t1 AT1G24100 34.511 481 277 14 5 472 3 458 4.53e-83 264
MS.gene065699.t1 AT1G22380 30.642 483 307 10 13 477 13 485 5.15e-76 247
MS.gene065699.t1 AT1G22340 31.106 479 305 10 13 474 13 483 1.91e-75 245
MS.gene065699.t1 AT1G22360 30.561 481 306 11 13 475 10 480 4.99e-74 241
MS.gene065699.t1 AT1G22400 30.977 481 305 9 13 475 13 484 5.14e-73 239
MS.gene065699.t1 AT2G28080 30.297 472 299 13 22 481 27 480 3.85e-70 231
MS.gene065699.t1 AT2G36970 28.964 473 311 11 13 472 10 470 3.49e-69 229
MS.gene065699.t1 AT1G22360 29.522 481 299 11 13 475 10 468 1.95e-68 226
MS.gene065699.t1 AT1G78270 30.061 489 294 12 13 473 13 481 2.50e-68 226
MS.gene065699.t1 AT1G22370 29.424 486 324 9 1 475 1 478 1.46e-67 224
MS.gene065699.t1 AT2G23210 42.308 286 142 7 11 292 8 274 6.23e-67 217
MS.gene065699.t1 AT5G59590 31.417 487 277 16 4 472 2 449 9.72e-64 213
MS.gene065699.t1 AT5G59580 30.962 478 273 16 13 472 9 447 4.83e-63 212
MS.gene065699.t1 AT2G36770 28.400 500 320 15 1 473 1 489 1.12e-59 204
MS.gene065699.t1 AT3G46660 30.316 475 281 13 14 472 15 455 3.08e-57 196
MS.gene065699.t1 AT3G46680 28.866 485 284 14 7 470 3 447 3.54e-57 196
MS.gene065699.t1 AT2G36780 27.811 507 328 15 1 480 1 496 1.17e-56 196
MS.gene065699.t1 AT5G38010 30.737 475 277 13 13 469 10 450 4.55e-56 193
MS.gene065699.t1 AT5G05870 30.000 480 291 11 11 474 6 456 1.27e-55 192
MS.gene065699.t1 AT2G15480 28.000 500 307 17 5 472 2 480 2.40e-55 192
MS.gene065699.t1 AT4G34131 29.630 486 304 15 11 472 8 479 6.63e-55 191
MS.gene065699.t1 AT3G46670 29.958 474 278 15 13 469 9 445 1.49e-54 189
MS.gene065699.t1 AT5G38040 28.785 469 274 14 21 469 18 446 1.94e-54 189
MS.gene065699.t1 AT3G46690 30.508 472 279 15 13 469 9 446 2.61e-54 189
MS.gene065699.t1 AT2G15490 29.175 497 297 17 9 472 3 477 3.14e-54 189
MS.gene065699.t1 AT4G34138 30.505 495 286 16 11 472 9 478 4.37e-54 189
MS.gene065699.t1 AT2G15480 27.843 510 305 17 5 472 2 490 7.48e-54 188
MS.gene065699.t1 AT2G36800 29.102 512 300 19 1 473 1 488 1.04e-53 188
MS.gene065699.t1 AT2G36750 29.259 499 305 19 6 473 3 484 1.10e-53 188
MS.gene065699.t1 AT4G01070 29.832 476 288 17 13 465 8 460 1.43e-53 187
MS.gene065699.t1 AT2G15490 28.800 500 298 17 9 472 3 480 3.26e-53 186
MS.gene065699.t1 AT2G36790 29.482 502 304 18 12 481 12 495 8.38e-53 186
MS.gene065699.t1 AT2G30150 28.964 473 290 13 13 472 13 452 1.15e-52 184
MS.gene065699.t1 AT2G36760 27.000 500 327 14 1 473 1 489 1.51e-52 185
MS.gene065699.t1 AT3G02100 26.844 488 312 14 1 472 1 459 1.84e-52 184
MS.gene065699.t1 AT3G46650 28.964 473 281 14 5 468 2 428 7.67e-52 181
MS.gene065699.t1 AT1G22370 33.779 299 189 4 182 475 14 308 9.06e-52 178
MS.gene065699.t1 AT3G53160 29.800 500 290 18 12 473 7 483 1.09e-51 182
MS.gene065699.t1 AT3G11340 28.216 482 296 15 4 473 2 445 2.03e-51 181
MS.gene065699.t1 AT2G30150 29.247 465 283 14 21 472 5 436 2.22e-51 181
MS.gene065699.t1 AT4G34135 29.175 497 293 13 11 472 9 481 3.93e-51 181
MS.gene065699.t1 AT2G30140 28.302 477 286 14 13 472 13 450 8.16e-51 179
MS.gene065699.t1 AT2G30140 28.243 478 286 14 13 472 13 451 1.31e-50 179
MS.gene065699.t1 AT3G16520 32.070 343 208 9 131 462 121 449 3.80e-50 177
MS.gene065699.t1 AT3G46700 28.067 481 280 16 13 472 9 444 4.00e-50 177
MS.gene065699.t1 AT5G05880 28.632 475 292 14 12 472 7 448 4.30e-50 177
MS.gene065699.t1 AT3G16520 32.653 343 204 10 131 458 121 451 1.79e-49 176
MS.gene065699.t1 AT3G46720 28.908 467 284 12 13 469 9 437 3.76e-49 174
MS.gene065699.t1 AT3G16520 33.133 332 195 10 131 447 121 440 1.80e-48 173
MS.gene065699.t1 AT4G15280 26.052 499 315 14 7 473 30 506 9.50e-48 172
MS.gene065699.t1 AT4G15280 25.859 495 313 14 11 473 2 474 2.03e-47 171
MS.gene065699.t1 AT5G05860 27.521 476 298 13 12 474 8 449 5.68e-47 169
MS.gene065699.t1 AT1G30530 27.564 468 304 12 13 473 12 451 2.13e-46 167
MS.gene065699.t1 AT5G17050 27.215 474 304 13 13 473 12 457 9.19e-46 166
MS.gene065699.t1 AT3G22250 26.947 475 276 15 7 445 2 441 9.56e-46 166
MS.gene065699.t1 AT3G55700 27.409 467 290 18 23 473 18 451 2.35e-45 165
MS.gene065699.t1 AT5G05900 27.883 477 292 14 12 472 7 447 2.59e-45 164
MS.gene065699.t1 AT3G21790 29.610 385 222 9 120 472 111 478 2.76e-45 165
MS.gene065699.t1 AT1G07260 27.016 496 308 16 8 473 1 472 3.68e-45 164
MS.gene065699.t1 AT5G17040 25.427 468 310 11 13 473 5 440 5.27e-44 160
MS.gene065699.t1 AT3G55710 26.327 490 305 17 4 473 2 455 1.11e-43 160
MS.gene065699.t1 AT1G01420 28.571 476 293 15 13 465 8 459 1.35e-43 160
MS.gene065699.t1 AT1G01420 28.571 476 293 15 13 465 11 462 1.40e-43 160
MS.gene065699.t1 AT1G07250 28.851 409 259 14 83 473 79 473 3.34e-43 159
MS.gene065699.t1 AT1G73880 27.126 494 307 18 3 473 4 467 4.21e-43 159
MS.gene065699.t1 AT3G21800 24.435 487 323 11 14 472 6 475 5.10e-42 156
MS.gene065699.t1 AT2G16890 27.859 481 310 15 13 475 9 470 9.99e-42 155
MS.gene065699.t1 AT2G29740 26.556 482 317 16 11 470 6 472 1.13e-41 155
MS.gene065699.t1 AT5G05890 26.526 475 306 12 12 472 7 452 4.34e-41 153
MS.gene065699.t1 AT1G10400 25.466 483 312 15 11 471 5 461 6.51e-41 153
MS.gene065699.t1 AT5G03490 28.632 475 291 16 13 471 19 461 6.69e-41 152
MS.gene065699.t1 AT5G17040 30.717 293 189 6 182 473 59 338 2.55e-40 148
MS.gene065699.t1 AT1G01390 35.206 267 141 5 218 464 205 459 7.78e-40 150
MS.gene065699.t1 AT4G15260 27.174 368 229 8 131 473 2 355 8.01e-40 147
MS.gene065699.t1 AT5G14860 26.939 490 312 18 13 475 8 478 8.20e-40 150
MS.gene065699.t1 AT1G01390 35.206 267 141 5 218 464 222 476 9.01e-40 150
MS.gene065699.t1 AT5G66690 26.430 507 289 22 13 473 7 475 2.13e-39 149
MS.gene065699.t1 AT3G21750 28.125 384 227 12 122 473 103 469 4.19e-39 148
MS.gene065699.t1 AT3G53150 25.626 519 322 15 1 473 10 510 9.41e-39 147
MS.gene065699.t1 AT5G26310 25.692 506 283 20 13 471 7 466 1.21e-38 147
MS.gene065699.t1 AT3G50740 26.946 501 289 20 13 471 7 472 1.34e-38 147
MS.gene065699.t1 AT3G21780 24.025 487 325 10 11 472 2 468 1.49e-38 146
MS.gene065699.t1 AT2G26480 27.536 483 286 16 13 474 8 447 1.63e-38 146
MS.gene065699.t1 AT3G21760 26.632 383 241 10 117 472 111 480 4.60e-38 145
MS.gene065699.t1 AT2G29750 25.466 483 326 16 11 473 6 474 2.87e-37 143
MS.gene065699.t1 AT5G17030 26.271 472 310 13 13 473 12 456 6.91e-37 141
MS.gene065699.t1 AT2G29730 27.077 325 202 10 158 473 165 463 1.87e-36 140
MS.gene065699.t1 AT5G37950 28.075 374 225 11 28 387 1 344 2.15e-36 138
MS.gene065699.t1 AT2G29710 26.543 324 206 9 158 473 164 463 1.49e-35 138
MS.gene065699.t1 AT1G07240 30.169 295 184 9 193 473 190 476 6.13e-35 136
MS.gene065699.t1 AT4G36770 26.403 481 282 15 11 455 2 446 1.05e-34 135
MS.gene065699.t1 AT5G12890 24.554 505 319 14 12 479 9 488 1.14e-34 135
MS.gene065699.t1 AT5G37950 27.493 371 225 11 28 387 1 338 1.80e-34 132
MS.gene065699.t1 AT2G18560 30.745 322 176 10 173 465 66 369 3.44e-34 132
MS.gene065699.t1 AT1G06000 26.829 492 281 17 1 472 1 433 4.14e-34 133
MS.gene065699.t1 AT2G16890 27.252 433 279 14 13 428 9 422 1.46e-33 131
MS.gene065699.t1 AT1G51210 25.336 446 288 14 8 442 17 428 5.25e-30 122
MS.gene065699.t1 AT2G18570 23.750 480 306 17 13 461 5 455 3.11e-29 120
MS.gene065699.t1 AT5G65550 30.531 226 142 8 223 444 220 434 8.48e-29 119
MS.gene065699.t1 AT4G34135 25.588 340 204 9 11 323 9 326 3.14e-22 97.8
MS.gene065699.t1 AT4G27570 22.951 488 301 17 11 472 5 443 5.81e-22 98.6
MS.gene065699.t1 AT2G22590 27.413 259 169 7 223 475 224 469 1.24e-21 97.8
MS.gene065699.t1 AT5G49690 27.059 255 159 9 223 473 217 448 2.48e-21 97.1
MS.gene065699.t1 AT3G29630 22.822 482 324 15 11 481 4 448 2.10e-20 94.0
MS.gene065699.t1 AT5G53990 30.387 181 120 4 273 448 238 417 1.61e-19 91.3
MS.gene065699.t1 AT3G29630 28.505 214 143 6 273 481 214 422 2.22e-19 90.5
MS.gene065699.t1 AT4G27560 22.129 479 316 16 11 472 5 443 3.83e-19 90.1
MS.gene065699.t1 AT5G54010 21.171 444 286 15 11 432 4 405 1.03e-18 89.0
MS.gene065699.t1 AT2G22930 21.341 492 305 17 8 472 1 437 6.03e-18 86.7
MS.gene065699.t1 AT1G64910 21.174 477 316 15 12 472 5 437 2.05e-17 84.7
MS.gene065699.t1 AT1G50580 25.556 180 130 3 273 448 239 418 1.61e-16 82.0
MS.gene065699.t1 AT4G01070 25.895 363 223 16 13 353 8 346 1.81e-16 81.3
MS.gene065699.t1 AT4G09500 21.962 469 286 18 8 448 1 417 2.92e-16 81.3
MS.gene065699.t1 AT5G54060 22.789 294 206 8 187 473 184 463 2.07e-14 75.9
MS.gene065699.t1 AT4G09500 26.705 176 123 4 278 448 218 392 2.58e-14 75.1
MS.gene065699.t1 AT1G64920 23.671 207 148 6 273 472 238 441 3.87e-12 68.6

Find 114 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAATTCCACGTCGATTTC+GGG 0.187714 1.4:+82763882 None:intergenic
CATTAAGGCCTTTGGTTAAA+AGG 0.194942 1.4:+82764306 None:intergenic
TGTATTCATCAGGGGATTTA+AGG 0.195702 1.4:+82764144 None:intergenic
AATGGGCCTACAGGTGTAAT+TGG 0.210652 1.4:+82763678 None:intergenic
ACCAATAGGACATGAATTTC+TGG 0.211648 1.4:+82764380 None:intergenic
GAGACTAATGGGACCGAATT+TGG 0.214605 1.4:+82764109 None:intergenic
AGCAAATTCTTTCTACGAAT+TGG 0.238092 1.4:-82763736 MS.gene065699:CDS
GGGTAATTCCACGTCGATTT+CGG 0.251769 1.4:+82763881 None:intergenic
ATATCCCATGTGCTTGTCTT+TGG 0.268042 1.4:-82763980 MS.gene065699:CDS
GAAACAAGCATTGCATTTGT+TGG 0.324145 1.4:+82763225 None:intergenic
AGTAATGAAGGTGGAACTAA+TGG 0.348707 1.4:+82763660 None:intergenic
TGGTGGCAAGTGTGACATTA+AGG 0.349319 1.4:+82764291 None:intergenic
ACCAGAAATTCATGTCCTAT+TGG 0.362491 1.4:-82764381 MS.gene065699:CDS
TAACTGAAGATGGTGGCTTT+TGG 0.369876 1.4:+82763565 None:intergenic
AAGACATGAAGAAACTGAAA+TGG 0.388659 1.4:-82763764 MS.gene065699:CDS
ACCTCCAACAATTTCTTCAA+TGG 0.392071 1.4:+82763128 None:intergenic
ATCAGGGGATTTAAGGCCTT+GGG 0.394811 1.4:+82764151 None:intergenic
ATGAGATTTGTGAGACTAAT+GGG 0.397989 1.4:+82764098 None:intergenic
TATGGGGATTCGGTTGAAAC+AGG 0.399818 1.4:-82763190 MS.gene065699:CDS
ATTTCAGTTTCTTCATGTCT+TGG 0.400551 1.4:+82763766 None:intergenic
GTGTCCACAAACTAAGGTTT+TGG 0.404149 1.4:-82763355 MS.gene065699:CDS
AAGTGTGACATTAAGGCCTT+TGG 0.409212 1.4:+82764298 None:intergenic
CATCAGGGGATTTAAGGCCT+TGG 0.411880 1.4:+82764150 None:intergenic
ATTAAGGCCTTTGGTTAAAA+GGG 0.414486 1.4:+82764307 None:intergenic
GTGATGAAGAGTAAGGATAT+TGG 0.420945 1.4:-82763447 MS.gene065699:CDS
ATGAGTTCCATGTATTCATC+AGG 0.421010 1.4:+82764134 None:intergenic
ATTTGCCTAGTCTAAGTAAA+GGG 0.429558 1.4:+82764330 None:intergenic
GCGAGGGAGGCGGTGGCTGA+TGG 0.437864 1.4:-82763057 MS.gene065699:CDS
GTTAAGAAACACGCTATTGC+AGG 0.441026 1.4:+82763327 None:intergenic
TACATGGTGTCCACAAACTA+AGG 0.443360 1.4:-82763361 MS.gene065699:CDS
ACATGCGGCGAGGGAGGCGG+TGG 0.445235 1.4:-82763064 MS.gene065699:CDS
ACGATAGTATACGGAGTAAA+GGG 0.446387 1.4:+82763944 None:intergenic
TTTGCTACCCAAGGAACAAA+AGG 0.448391 1.4:+82764020 None:intergenic
GATGAGATTTGTGAGACTAA+TGG 0.455139 1.4:+82764097 None:intergenic
TTAGTTCCACCTTCATTACT+AGG 0.457678 1.4:-82763657 MS.gene065699:CDS
TCAGTTATATATATTTCATT+CGG 0.457992 1.4:-82763549 MS.gene065699:CDS
GAGCTGAAAATGCAACCAAT+AGG 0.460632 1.4:+82764366 None:intergenic
ATGGAACTCATAGCCAAATT+CGG 0.461232 1.4:-82764122 MS.gene065699:CDS
TGATCTTGACCTAGTAATGA+AGG 0.463203 1.4:+82763648 None:intergenic
AGAGCCATTGAAGAAATTGT+TGG 0.473416 1.4:-82763132 MS.gene065699:CDS
TTAGAAGAAACAAAAGAGAA+AGG 0.474379 1.4:-82763393 MS.gene065699:CDS
AACGATAGTATACGGAGTAA+AGG 0.478001 1.4:+82763943 None:intergenic
CATTGTGGATAACCAATCAT+AGG 0.478572 1.4:+82763258 None:intergenic
GGTGGAACTAATGGGCCTAC+AGG 0.479863 1.4:+82763669 None:intergenic
TGGTTTCAGCAATGGAAGAC+CGG 0.481559 1.4:+82763860 None:intergenic
ATGGGCCTACAGGTGTAATT+GGG 0.485212 1.4:+82763679 None:intergenic
GAAATATATATAACTGAAGA+TGG 0.487490 1.4:+82763555 None:intergenic
AAGAAATTGTTGGAGGTGAA+AGG 0.488865 1.4:-82763122 MS.gene065699:CDS
CACAAGATTCTTGCATGGAA+TGG 0.490164 1.4:-82763593 MS.gene065699:CDS
TTTGATGGAAGAATAAAAGA+TGG 0.494976 1.4:+82763828 None:intergenic
AAAAGATGTCATTGATTCAA+TGG 0.497573 1.4:-82763712 MS.gene065699:CDS
CGGTTGAAACAGGACAATGA+TGG 0.499891 1.4:-82763180 MS.gene065699:CDS
AGAAAGGATTGGTTGTTACA+TGG 0.502350 1.4:-82763377 MS.gene065699:CDS
AGGGAGGCGGTGGCTGATGG+TGG 0.507840 1.4:-82763054 MS.gene065699:CDS
GAAACATGCGGCGAGGGAGG+CGG 0.508586 1.4:-82763067 MS.gene065699:CDS
AAACAGGACGTTGATTCCAT+TGG 0.517626 1.4:+82764196 None:intergenic
AGGTCTTGTGGTTTCAGCAA+TGG 0.518610 1.4:+82763852 None:intergenic
GTTTCTTAACACACTGTGGA+TGG 0.529174 1.4:-82763314 MS.gene065699:CDS
AGACATGAAGAAACTGAAAT+GGG 0.530587 1.4:-82763763 MS.gene065699:CDS
ATAAAAGATGGAAGGTCTTG+TGG 0.531512 1.4:+82763840 None:intergenic
AGAAACAAAAGAGAAAGGAT+TGG 0.532118 1.4:-82763388 MS.gene065699:CDS
GTAATGAAGGTGGAACTAAT+GGG 0.535852 1.4:+82763661 None:intergenic
GGTTGAAACAGGACAATGAT+GGG 0.536148 1.4:-82763179 MS.gene065699:CDS
GTTGTAGAAACGATAGTATA+CGG 0.536258 1.4:+82763935 None:intergenic
ACTGCAGGAGTACCTATGAT+TGG 0.539262 1.4:-82763270 MS.gene065699:CDS
GATTTGCCTAGTCTAAGTAA+AGG 0.540884 1.4:+82764329 None:intergenic
TAAATCCCCTGATGAATACA+TGG 0.543699 1.4:-82764141 MS.gene065699:CDS
GGAGCTGAAACATGCGGCGA+GGG 0.548892 1.4:-82763073 MS.gene065699:CDS
TCTCTGGGTGATGAAGAGTA+AGG 0.551074 1.4:-82763454 MS.gene065699:CDS
CCCACTTCTTACTCTACCAA+TGG 0.551509 1.4:-82764212 MS.gene065699:CDS
GAACATTTCAGCTAAAACAT+CGG 0.554683 1.4:+82763788 None:intergenic
GCCATTGAAGAAATTGTTGG+AGG 0.554838 1.4:-82763129 MS.gene065699:CDS
TGAACCAAAACCTTAGTTTG+TGG 0.556902 1.4:+82763351 None:intergenic
GCTGAAACATGCGGCGAGGG+AGG 0.560744 1.4:-82763070 MS.gene065699:CDS
TTGCTACCCAAGGAACAAAA+GGG 0.560980 1.4:+82764021 None:intergenic
ACATTGGAAGCTGTAACTGC+AGG 0.571139 1.4:-82763285 MS.gene065699:CDS
CCATTGGTAGAGTAAGAAGT+GGG 0.575004 1.4:+82764212 None:intergenic
GGGGACGGTGTCTGTGTCTG+TGG 0.576171 1.4:+82764232 None:intergenic
TTCAGCTAAAACATCGGACA+TGG 0.577833 1.4:+82763794 None:intergenic
TGTTCCTTGGGTAGCAAACG+TGG 0.583754 1.4:-82764015 MS.gene065699:CDS
ATGGAAGAATAAAAGATGGA+AGG 0.584353 1.4:+82763832 None:intergenic
GACGGTGTCTGTGTCTGTGG+TGG 0.586453 1.4:+82764235 None:intergenic
GGTTTCAGCAATGGAAGACC+GGG 0.596842 1.4:+82763861 None:intergenic
GTAATTCCACGTCGATTTCG+GGG 0.603436 1.4:+82763883 None:intergenic
TATACGGAGTAAAGGGTACA+AGG 0.604453 1.4:+82763951 None:intergenic
TTGGGATATGTCGAAGCCGT+CGG 0.609015 1.4:+82764169 None:intergenic
TGAGTTCCATGTATTCATCA+GGG 0.611788 1.4:+82764135 None:intergenic
CTGATGGTGGCTCTTCTGAG+AGG 0.612329 1.4:-82763041 MS.gene065699:CDS
GAAATCGACGTGGAATTACC+CGG 0.614583 1.4:-82763879 MS.gene065699:CDS
TAAGCCACGTTTGCTACCCA+AGG 0.618408 1.4:+82764011 None:intergenic
TCCATTGGTAGAGTAAGAAG+TGG 0.625007 1.4:+82764211 None:intergenic
CTATGATTGGTTATCCACAA+TGG 0.629343 1.4:-82763257 MS.gene065699:CDS
GAGTTCCATGTATTCATCAG+GGG 0.630496 1.4:+82764136 None:intergenic
GTTGGTTGATCAGTCCATTG+TGG 0.632886 1.4:+82763243 None:intergenic
CTGTGGATGGAATTCTACAT+TGG 0.633378 1.4:-82763301 MS.gene065699:CDS
CATTCCATGCAAGAATCTTG+TGG 0.635345 1.4:+82763594 None:intergenic
ATAAACCCTTTACTTAGACT+AGG 0.638559 1.4:-82764335 MS.gene065699:CDS
GACGCCACAAGATTCTTGCA+TGG 0.640093 1.4:-82763598 MS.gene065699:CDS
ATATATATAACTGAAGATGG+TGG 0.642086 1.4:+82763558 None:intergenic
GACGGCTTCGACATATCCCA+AGG 0.643166 1.4:-82764167 MS.gene065699:CDS
TGGTGGTTGATTTGAAGACA+CGG 0.645486 1.4:+82764252 None:intergenic
TGGAGCTGAAACATGCGGCG+AGG 0.651171 1.4:-82763074 MS.gene065699:CDS
TCTTGACCTAGTAATGAAGG+TGG 0.666199 1.4:+82763651 None:intergenic
TGAATCCAAAGACAAGCACA+TGG 0.666711 1.4:+82763975 None:intergenic
AAGACGTTGGAATTGAAATG+TGG 0.668188 1.4:-82763620 MS.gene065699:CDS
TGCGTTGGAGCTGAAACATG+CGG 0.670482 1.4:-82763079 MS.gene065699:CDS
GGTAGAGTAAGAAGTGGGGA+CGG 0.671471 1.4:+82764217 None:intergenic
GCGTGTTTCTTAACACACTG+TGG 0.672897 1.4:-82763318 MS.gene065699:CDS
AGAAAACCCCGAAATCGACG+TGG 0.674952 1.4:-82763889 MS.gene065699:CDS
GTGGTAAACTAATTCAGTGG+TGG 0.675799 1.4:+82764274 None:intergenic
GAATCCAAAGACAAGCACAT+GGG 0.703367 1.4:+82763976 None:intergenic
ACGGTGGTAAACTAATTCAG+TGG 0.706027 1.4:+82764271 None:intergenic
CATTGGTAGAGTAAGAAGTG+GGG 0.739463 1.4:+82764213 None:intergenic
TGGTTGATTTGAAGACACGG+TGG 0.837597 1.4:+82764255 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAGTTATATATATTTCATT+CGG - chr1.4:82763842-82763861 MS.gene065699:CDS 15.0%
!! GAAATATATATAACTGAAGA+TGG + chr1.4:82763839-82763858 None:intergenic 20.0%
! ATATATATAACTGAAGATGG+TGG + chr1.4:82763836-82763855 None:intergenic 25.0%
! TTAGAAGAAACAAAAGAGAA+AGG - chr1.4:82763998-82764017 MS.gene065699:CDS 25.0%
! TTTGATGGAAGAATAAAAGA+TGG + chr1.4:82763566-82763585 None:intergenic 25.0%
!! ACAGTAACAAATATTTTCTC+TGG - chr1.4:82763921-82763940 MS.gene065699:CDS 25.0%
!! ATGGTTTTTATAGGATTTGA+TGG + chr1.4:82763581-82763600 None:intergenic 25.0%
!! CAGTAACAAATATTTTCTCT+GGG - chr1.4:82763922-82763941 MS.gene065699:CDS 25.0%
!!! AAAAGATGTCATTGATTCAA+TGG - chr1.4:82763679-82763698 MS.gene065699:CDS 25.0%
!!! GATAATGCAAGCTAATTTTT+TGG + chr1.4:82763345-82763364 None:intergenic 25.0%
AAGACATGAAGAAACTGAAA+TGG - chr1.4:82763627-82763646 MS.gene065699:CDS 30.0%
AGAAACAAAAGAGAAAGGAT+TGG - chr1.4:82764003-82764022 MS.gene065699:CDS 30.0%
AGACATGAAGAAACTGAAAT+GGG - chr1.4:82763628-82763647 MS.gene065699:CDS 30.0%
AGCAAATTCTTTCTACGAAT+TGG - chr1.4:82763655-82763674 MS.gene065699:CDS 30.0%
AGTGTTTAAGAAAAATGCGT+TGG - chr1.4:82764297-82764316 MS.gene065699:CDS 30.0%
ATAAACCCTTTACTTAGACT+AGG - chr1.4:82763056-82763075 MS.gene065699:CDS 30.0%
ATGAGATTTGTGAGACTAAT+GGG + chr1.4:82763296-82763315 None:intergenic 30.0%
ATGGAAGAATAAAAGATGGA+AGG + chr1.4:82763562-82763581 None:intergenic 30.0%
ATTAAGGCCTTTGGTTAAAA+GGG + chr1.4:82763087-82763106 None:intergenic 30.0%
ATTTCAGTTTCTTCATGTCT+TGG + chr1.4:82763628-82763647 None:intergenic 30.0%
ATTTGCCTAGTCTAAGTAAA+GGG + chr1.4:82763064-82763083 None:intergenic 30.0%
GAACATTTCAGCTAAAACAT+CGG + chr1.4:82763606-82763625 None:intergenic 30.0%
GTTGTAGAAACGATAGTATA+CGG + chr1.4:82763459-82763478 None:intergenic 30.0%
! GTTTCTGATGTTTTTCGTAT+GGG - chr1.4:82764184-82764203 MS.gene065699:CDS 30.0%
! TTTCTGATGTTTTTCGTATG+GGG - chr1.4:82764185-82764204 MS.gene065699:CDS 30.0%
!! TGTTTCTGATGTTTTTCGTA+TGG - chr1.4:82764183-82764202 MS.gene065699:CDS 30.0%
!!! ATGCAAGCTAATTTTTTGGA+AGG + chr1.4:82763341-82763360 None:intergenic 30.0%
!!! TGCAAGCTAATTTTTTGGAA+GGG + chr1.4:82763340-82763359 None:intergenic 30.0%
AACGATAGTATACGGAGTAA+AGG + chr1.4:82763451-82763470 None:intergenic 35.0%
AAGAAATTGTTGGAGGTGAA+AGG - chr1.4:82764269-82764288 MS.gene065699:CDS 35.0%
AAGACGTTGGAATTGAAATG+TGG - chr1.4:82763771-82763790 MS.gene065699:CDS 35.0%
ACCAATAGGACATGAATTTC+TGG + chr1.4:82763014-82763033 None:intergenic 35.0%
ACCAGAAATTCATGTCCTAT+TGG - chr1.4:82763010-82763029 MS.gene065699:CDS 35.0%
ACCTCCAACAATTTCTTCAA+TGG + chr1.4:82764266-82764285 None:intergenic 35.0%
ACGATAGTATACGGAGTAAA+GGG + chr1.4:82763450-82763469 None:intergenic 35.0%
AGAGCCATTGAAGAAATTGT+TGG - chr1.4:82764259-82764278 MS.gene065699:CDS 35.0%
AGTAATGAAGGTGGAACTAA+TGG + chr1.4:82763734-82763753 None:intergenic 35.0%
ATAAAAGATGGAAGGTCTTG+TGG + chr1.4:82763554-82763573 None:intergenic 35.0%
ATGAGTTCCATGTATTCATC+AGG + chr1.4:82763260-82763279 None:intergenic 35.0%
ATGGAACTCATAGCCAAATT+CGG - chr1.4:82763269-82763288 MS.gene065699:CDS 35.0%
CAAGATCAAAAACAAGACGT+TGG - chr1.4:82763758-82763777 MS.gene065699:CDS 35.0%
CATTAAGGCCTTTGGTTAAA+AGG + chr1.4:82763088-82763107 None:intergenic 35.0%
CATTGTGGATAACCAATCAT+AGG + chr1.4:82764136-82764155 None:intergenic 35.0%
GATGAGATTTGTGAGACTAA+TGG + chr1.4:82763297-82763316 None:intergenic 35.0%
GATTTGCCTAGTCTAAGTAA+AGG + chr1.4:82763065-82763084 None:intergenic 35.0%
GTAATGAAGGTGGAACTAAT+GGG + chr1.4:82763733-82763752 None:intergenic 35.0%
GTGATGAAGAGTAAGGATAT+TGG - chr1.4:82763944-82763963 MS.gene065699:CDS 35.0%
TAAATCCCCTGATGAATACA+TGG - chr1.4:82763250-82763269 MS.gene065699:CDS 35.0%
TGAGTTCCATGTATTCATCA+GGG + chr1.4:82763259-82763278 None:intergenic 35.0%
TGATCTTGACCTAGTAATGA+AGG + chr1.4:82763746-82763765 None:intergenic 35.0%
TGTATTCATCAGGGGATTTA+AGG + chr1.4:82763250-82763269 None:intergenic 35.0%
TTAGTTCCACCTTCATTACT+AGG - chr1.4:82763734-82763753 MS.gene065699:CDS 35.0%
! ACATCGGACATGGTTTTTAT+AGG + chr1.4:82763590-82763609 None:intergenic 35.0%
! ATGTTTTTCGTATGGGGATT+CGG - chr1.4:82764191-82764210 MS.gene065699:CDS 35.0%
! ATTTTCCCAATTACACCTGT+AGG - chr1.4:82763707-82763726 MS.gene065699:CDS 35.0%
! CAATAACCCTTTTGTTCCTT+GGG - chr1.4:82763364-82763383 MS.gene065699:CDS 35.0%
! CTATGATTGGTTATCCACAA+TGG - chr1.4:82764134-82764153 MS.gene065699:CDS 35.0%
! GAAACAAGCATTGCATTTGT+TGG + chr1.4:82764169-82764188 None:intergenic 35.0%
! TCAATAACCCTTTTGTTCCT+TGG - chr1.4:82763363-82763382 MS.gene065699:CDS 35.0%
! TGAACCAAAACCTTAGTTTG+TGG + chr1.4:82764043-82764062 None:intergenic 35.0%
!! AGAAAGGATTGGTTGTTACA+TGG - chr1.4:82764014-82764033 MS.gene065699:CDS 35.0%
AAGTGTGACATTAAGGCCTT+TGG + chr1.4:82763096-82763115 None:intergenic 40.0%
ACGGTGGTAAACTAATTCAG+TGG + chr1.4:82763123-82763142 None:intergenic 40.0%
ATATCCCATGTGCTTGTCTT+TGG - chr1.4:82763411-82763430 MS.gene065699:CDS 40.0%
CACAAGATTCTTGCATGGAA+TGG - chr1.4:82763798-82763817 MS.gene065699:CDS 40.0%
CATTCCATGCAAGAATCTTG+TGG + chr1.4:82763800-82763819 None:intergenic 40.0%
CATTGGTAGAGTAAGAAGTG+GGG + chr1.4:82763181-82763200 None:intergenic 40.0%
CCATTGGTAGAGTAAGAAGT+GGG + chr1.4:82763182-82763201 None:intergenic 40.0%
CTGTGGATGGAATTCTACAT+TGG - chr1.4:82764090-82764109 MS.gene065699:CDS 40.0%
GAATCCAAAGACAAGCACAT+GGG + chr1.4:82763418-82763437 None:intergenic 40.0%
GAGCTGAAAATGCAACCAAT+AGG + chr1.4:82763028-82763047 None:intergenic 40.0%
GAGTTCCATGTATTCATCAG+GGG + chr1.4:82763258-82763277 None:intergenic 40.0%
GCCATTGAAGAAATTGTTGG+AGG - chr1.4:82764262-82764281 MS.gene065699:CDS 40.0%
GGTTGAAACAGGACAATGAT+GGG - chr1.4:82764212-82764231 MS.gene065699:CDS 40.0%
GTGGTAAACTAATTCAGTGG+TGG + chr1.4:82763120-82763139 None:intergenic 40.0%
GTTAAGAAACACGCTATTGC+AGG + chr1.4:82764067-82764086 None:intergenic 40.0%
GTTTCTTAACACACTGTGGA+TGG - chr1.4:82764077-82764096 MS.gene065699:CDS 40.0%
TACATGGTGTCCACAAACTA+AGG - chr1.4:82764030-82764049 MS.gene065699:CDS 40.0%
TCCATTGGTAGAGTAAGAAG+TGG + chr1.4:82763183-82763202 None:intergenic 40.0%
TCTTGACCTAGTAATGAAGG+TGG + chr1.4:82763743-82763762 None:intergenic 40.0%
TGAATCCAAAGACAAGCACA+TGG + chr1.4:82763419-82763438 None:intergenic 40.0%
TTCAGCTAAAACATCGGACA+TGG + chr1.4:82763600-82763619 None:intergenic 40.0%
TTGCTACCCAAGGAACAAAA+GGG + chr1.4:82763373-82763392 None:intergenic 40.0%
TTTGCTACCCAAGGAACAAA+AGG + chr1.4:82763374-82763393 None:intergenic 40.0%
! GGCAAATCCCTTTTAACCAA+AGG - chr1.4:82763077-82763096 MS.gene065699:CDS 40.0%
! GTGTCCACAAACTAAGGTTT+TGG - chr1.4:82764036-82764055 MS.gene065699:CDS 40.0%
! TATACGGAGTAAAGGGTACA+AGG + chr1.4:82763443-82763462 None:intergenic 40.0%
! TTGGTTGCATTTTCAGCTCA+AGG - chr1.4:82763029-82763048 MS.gene065699:CDS 40.0%
!! AAACAGGACGTTGATTCCAT+TGG + chr1.4:82763198-82763217 None:intergenic 40.0%
!! TAACTGAAGATGGTGGCTTT+TGG + chr1.4:82763829-82763848 None:intergenic 40.0%
!! TGGTGGTTGATTTGAAGACA+CGG + chr1.4:82763142-82763161 None:intergenic 40.0%
AATGGGCCTACAGGTGTAAT+TGG + chr1.4:82763716-82763735 None:intergenic 45.0%
ACATTGGAAGCTGTAACTGC+AGG - chr1.4:82764106-82764125 MS.gene065699:CDS 45.0%
ATGGGCCTACAGGTGTAATT+GGG + chr1.4:82763715-82763734 None:intergenic 45.0%
CCCACTTCTTACTCTACCAA+TGG - chr1.4:82763179-82763198 MS.gene065699:CDS 45.0%
CGGTTGAAACAGGACAATGA+TGG - chr1.4:82764211-82764230 MS.gene065699:CDS 45.0%
GAAATCGACGTGGAATTACC+CGG - chr1.4:82763512-82763531 MS.gene065699:CDS 45.0%
GAGACTAATGGGACCGAATT+TGG + chr1.4:82763285-82763304 None:intergenic 45.0%
GCGTGTTTCTTAACACACTG+TGG - chr1.4:82764073-82764092 MS.gene065699:CDS 45.0%
GTTGGTTGATCAGTCCATTG+TGG + chr1.4:82764151-82764170 None:intergenic 45.0%
TCTCTGGGTGATGAAGAGTA+AGG - chr1.4:82763937-82763956 MS.gene065699:CDS 45.0%
TGGTGGCAAGTGTGACATTA+AGG + chr1.4:82763103-82763122 None:intergenic 45.0%
TGGTTTCAGCAATGGAAGAC+CGG + chr1.4:82763534-82763553 None:intergenic 45.0%
! AGGTCTTGTGGTTTCAGCAA+TGG + chr1.4:82763542-82763561 None:intergenic 45.0%
! ATCAGGGGATTTAAGGCCTT+GGG + chr1.4:82763243-82763262 None:intergenic 45.0%
! TATGGGGATTCGGTTGAAAC+AGG - chr1.4:82764201-82764220 MS.gene065699:CDS 45.0%
!! AACGTCCTGTTTTTCTCCGA+CGG - chr1.4:82763206-82763225 MS.gene065699:CDS 45.0%
!! ACTGCAGGAGTACCTATGAT+TGG - chr1.4:82764121-82764140 MS.gene065699:CDS 45.0%
!! GGGTAATTCCACGTCGATTT+CGG + chr1.4:82763513-82763532 None:intergenic 45.0%
!! GGTAATTCCACGTCGATTTC+GGG + chr1.4:82763512-82763531 None:intergenic 45.0%
!! GTAATTCCACGTCGATTTCG+GGG + chr1.4:82763511-82763530 None:intergenic 45.0%
!! GTCGATTTCGGGGTTTTCTA+GGG + chr1.4:82763501-82763520 None:intergenic 45.0%
!! TGGTTGATTTGAAGACACGG+TGG + chr1.4:82763139-82763158 None:intergenic 45.0%
!!! ATTTCGGGGTTTTCTAGGGT+TGG + chr1.4:82763497-82763516 None:intergenic 45.0%
!!! GGTTTTCTAGGGTTGGAAAC+TGG + chr1.4:82763490-82763509 None:intergenic 45.0%
AGAAAACCCCGAAATCGACG+TGG - chr1.4:82763502-82763521 MS.gene065699:CDS 50.0%
GACGCCACAAGATTCTTGCA+TGG - chr1.4:82763793-82763812 MS.gene065699:CDS 50.0%
GGTAGAGTAAGAAGTGGGGA+CGG + chr1.4:82763177-82763196 None:intergenic 50.0%
GGTTTCAGCAATGGAAGACC+GGG + chr1.4:82763533-82763552 None:intergenic 50.0%
TGCGTTGGAGCTGAAACATG+CGG - chr1.4:82764312-82764331 MS.gene065699:CDS 50.0%
TGTTCCTTGGGTAGCAAACG+TGG - chr1.4:82763376-82763395 MS.gene065699:CDS 50.0%
TTGGGATATGTCGAAGCCGT+CGG + chr1.4:82763225-82763244 None:intergenic 50.0%
! CATCAGGGGATTTAAGGCCT+TGG + chr1.4:82763244-82763263 None:intergenic 50.0%
! TAAGCCACGTTTGCTACCCA+AGG + chr1.4:82763383-82763402 None:intergenic 50.0%
!!! CGTCGATTTCGGGGTTTTCT+AGG + chr1.4:82763502-82763521 None:intergenic 50.0%
CGAAGCCGTCGGAGAAAAAC+AGG + chr1.4:82763214-82763233 None:intergenic 55.0%
GACGGCTTCGACATATCCCA+AGG - chr1.4:82763224-82763243 MS.gene065699:CDS 55.0%
! GGTGGAACTAATGGGCCTAC+AGG + chr1.4:82763725-82763744 None:intergenic 55.0%
!! CTGATGGTGGCTCTTCTGAG+AGG - chr1.4:82764350-82764369 MS.gene065699:CDS 55.0%
GACGGTGTCTGTGTCTGTGG+TGG + chr1.4:82763159-82763178 None:intergenic 60.0%
GGAGCTGAAACATGCGGCGA+GGG - chr1.4:82764318-82764337 MS.gene065699:CDS 60.0%
TGGAGCTGAAACATGCGGCG+AGG - chr1.4:82764317-82764336 MS.gene065699:CDS 60.0%
GAAACATGCGGCGAGGGAGG+CGG - chr1.4:82764324-82764343 MS.gene065699:CDS 65.0%
GCTGAAACATGCGGCGAGGG+AGG - chr1.4:82764321-82764340 MS.gene065699:CDS 65.0%
GGGGACGGTGTCTGTGTCTG+TGG + chr1.4:82763162-82763181 None:intergenic 65.0%
AGGGAGGCGGTGGCTGATGG+TGG - chr1.4:82764337-82764356 MS.gene065699:CDS 70.0%
ACATGCGGCGAGGGAGGCGG+TGG - chr1.4:82764327-82764346 MS.gene065699:CDS 75.0%
GCGAGGGAGGCGGTGGCTGA+TGG - chr1.4:82764334-82764353 MS.gene065699:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 82762984 82764429 82762984 ID=MS.gene065699
chr1.4 mRNA 82762984 82764429 82762984 ID=MS.gene065699.t1;Parent=MS.gene065699
chr1.4 exon 82762984 82764429 82762984 ID=MS.gene065699.t1.exon1;Parent=MS.gene065699.t1
chr1.4 CDS 82762984 82764429 82762984 ID=cds.MS.gene065699.t1;Parent=MS.gene065699.t1
Gene Sequence

>MS.gene065699

ATGTCTTCAGAAGACACAAAAATCAAACCAGAAATTCATGTCCTATTGGTTGCATTTTCAGCTCAAGGTCACATAAACCCTTTACTTAGACTAGGCAAATCCCTTTTAACCAAAGGCCTTAATGTCACACTTGCCACCACTGAATTAGTTTACCACCGTGTCTTCAAATCAACCACCACAGACACAGACACCGTCCCCACTTCTTACTCTACCAATGGAATCAACGTCCTGTTTTTCTCCGACGGCTTCGACATATCCCAAGGCCTTAAATCCCCTGATGAATACATGGAACTCATAGCCAAATTCGGTCCCATTAGTCTCACAAATCTCATCAAAAACAATTTCATCAACAACCCTTCCAAAAAATTAGCTTGCATTATCAATAACCCTTTTGTTCCTTGGGTAGCAAACGTGGCTTATGAATTCAATATCCCATGTGCTTGTCTTTGGATTCAACCTTGTACCCTTTACTCCGTATACTATCGTTTCTACAACGAACTCAACCAGTTTCCAACCCTAGAAAACCCCGAAATCGACGTGGAATTACCCGGTCTTCCATTGCTGAAACCACAAGACCTTCCATCTTTTATTCTTCCATCAAATCCTATAAAAACCATGTCCGATGTTTTAGCTGAAATGTTCCAAGACATGAAGAAACTGAAATGGGTATTAGCAAATTCTTTCTACGAATTGGAAAAAGATGTCATTGATTCAATGGCTGAGATTTTCCCAATTACACCTGTAGGCCCATTAGTTCCACCTTCATTACTAGGTCAAGATCAAAAACAAGACGTTGGAATTGAAATGTGGACGCCACAAGATTCTTGCATGGAATGGCTTAACCAAAAGCCACCATCTTCAGTTATATATATTTCATTCGGAAGTCTCATCTTTTTATCAGAAAAACAAATGCAAAGCATAGCAAATGCATTGAAAAACAGTAACAAATATTTTCTCTGGGTGATGAAGAGTAAGGATATTGGAAATGAAAAAGTTCAGCTTTCTGAAAAATTCTTAGAAGAAACAAAAGAGAAAGGATTGGTTGTTACATGGTGTCCACAAACTAAGGTTTTGGTTCATCCTGCAATAGCGTGTTTCTTAACACACTGTGGATGGAATTCTACATTGGAAGCTGTAACTGCAGGAGTACCTATGATTGGTTATCCACAATGGACTGATCAACCAACAAATGCAATGCTTGTTTCTGATGTTTTTCGTATGGGGATTCGGTTGAAACAGGACAATGATGGGTTTGTTGAAAGTGATGAAGTTGAAAGAGCCATTGAAGAAATTGTTGGAGGTGAAAGGTCTGAAGTGTTTAAGAAAAATGCGTTGGAGCTGAAACATGCGGCGAGGGAGGCGGTGGCTGATGGTGGCTCTTCTGAGAGGAATATACAAAGATTCGTTGATGAAATTCTTGTCAGTGCAATTCATAGTAATAATTGA

Protein sequence

>MS.gene065699.t1

MSSEDTKIKPEIHVLLVAFSAQGHINPLLRLGKSLLTKGLNVTLATTELVYHRVFKSTTTDTDTVPTSYSTNGINVLFFSDGFDISQGLKSPDEYMELIAKFGPISLTNLIKNNFINNPSKKLACIINNPFVPWVANVAYEFNIPCACLWIQPCTLYSVYYRFYNELNQFPTLENPEIDVELPGLPLLKPQDLPSFILPSNPIKTMSDVLAEMFQDMKKLKWVLANSFYELEKDVIDSMAEIFPITPVGPLVPPSLLGQDQKQDVGIEMWTPQDSCMEWLNQKPPSSVIYISFGSLIFLSEKQMQSIANALKNSNKYFLWVMKSKDIGNEKVQLSEKFLEETKEKGLVVTWCPQTKVLVHPAIACFLTHCGWNSTLEAVTAGVPMIGYPQWTDQPTNAMLVSDVFRMGIRLKQDNDGFVESDEVERAIEEIVGGERSEVFKKNALELKHAAREAVADGGSSERNIQRFVDEILVSAIHSNN