Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71664.t1 | XP_013470040.1 | 63.9 | 471 | 10 | 1 | 1 | 311 | 1 | 471 | 2.40E-153 | 551.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71664.t1 | V5LLZ9 | 35.1 | 467 | 146 | 4 | 1 | 311 | 1 | 466 | 4.5e-76 | 286.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71664.t1 | A0A072VRL2 | 63.9 | 471 | 10 | 1 | 1 | 311 | 1 | 471 | 1.7e-153 | 551.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene71664 | 0.828426 | 9.05E-55 | -1.69E-46 |
| MS.gene049153 | MS.gene71664 | 0.83423 | 3.38E-56 | -1.69E-46 |
| MS.gene049170 | MS.gene71664 | 0.82271 | 2.05E-53 | -1.69E-46 |
| MS.gene049236 | MS.gene71664 | -0.804811 | 1.81E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene71664 | 0.833292 | 5.80E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene71664 | 0.894341 | 2.70E-75 | -1.69E-46 |
| MS.gene049369 | MS.gene71664 | 0.843872 | 1.07E-58 | -1.69E-46 |
| MS.gene049480 | MS.gene71664 | 0.816953 | 4.24E-52 | -1.69E-46 |
| MS.gene049488 | MS.gene71664 | 0.808355 | 3.23E-50 | -1.69E-46 |
| MS.gene049491 | MS.gene71664 | 0.802283 | 6.04E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene71664 | 0.80119 | 1.01E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene71664 | 0.816474 | 5.43E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene71664 | 0.832202 | 1.08E-55 | -1.69E-46 |
| MS.gene049907 | MS.gene71664 | 0.811216 | 7.82E-51 | -1.69E-46 |
| MS.gene049910 | MS.gene71664 | 0.815186 | 1.05E-51 | -1.69E-46 |
| MS.gene050122 | MS.gene71664 | 0.817522 | 3.16E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene71664 | 0.803294 | 3.73E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene71664 | 0.85243 | 4.64E-61 | -1.69E-46 |
| MS.gene050397 | MS.gene71664 | 0.848756 | 5.00E-60 | -1.69E-46 |
| MS.gene050400 | MS.gene71664 | 0.824291 | 8.74E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene71664 | -0.846699 | 1.84E-59 | -1.69E-46 |
| MS.gene050432 | MS.gene71664 | 0.808714 | 2.70E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene71664 | 0.828976 | 6.66E-55 | -1.69E-46 |
| MS.gene050520 | MS.gene71664 | 0.803777 | 2.96E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene71664 | 0.841061 | 5.97E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene71664 | 0.809285 | 2.04E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene71664 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene71664 | 0.907315 | 5.79E-81 | -1.69E-46 |
| MS.gene050812 | MS.gene71664 | 0.812294 | 4.56E-51 | -1.69E-46 |
| MS.gene050971 | MS.gene71664 | 0.868428 | 6.58E-66 | -1.69E-46 |
| MS.gene05101 | MS.gene71664 | 0.800173 | 1.63E-48 | -1.69E-46 |
| MS.gene05105 | MS.gene71664 | 0.882538 | 9.58E-71 | -1.69E-46 |
| MS.gene051255 | MS.gene71664 | 0.870537 | 1.35E-66 | -1.69E-46 |
| MS.gene051360 | MS.gene71664 | 0.891933 | 2.52E-74 | -1.69E-46 |
| MS.gene051387 | MS.gene71664 | 0.839696 | 1.36E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene71664 | 0.895372 | 1.02E-75 | -1.69E-46 |
| MS.gene051582 | MS.gene71664 | 0.812192 | 4.80E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene71664 | 0.828903 | 6.94E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene71664 | 0.858502 | 7.89E-63 | -1.69E-46 |
| MS.gene051877 | MS.gene71664 | 0.816785 | 4.62E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene71664 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene71664 | -0.885419 | 8.26E-72 | -1.69E-46 |
| MS.gene052077 | MS.gene71664 | 0.862625 | 4.44E-64 | -1.69E-46 |
| MS.gene052078 | MS.gene71664 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene71664 | 0.825245 | 5.21E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene71664 | 0.83303 | 6.74E-56 | -1.69E-46 |
| MS.gene052136 | MS.gene71664 | 0.835401 | 1.72E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene71664 | 0.911475 | 5.83E-83 | -1.69E-46 |
| MS.gene052207 | MS.gene71664 | 0.803168 | 3.97E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene71664 | 0.896208 | 4.60E-76 | -1.69E-46 |
| MS.gene052255 | MS.gene71664 | 0.81771 | 2.86E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene71664 | 0.852752 | 3.76E-61 | -1.69E-46 |
| MS.gene052322 | MS.gene71664 | 0.801775 | 7.68E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene71664 | 0.875645 | 2.62E-68 | -1.69E-46 |
| MS.gene052346 | MS.gene71664 | 0.827344 | 1.65E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene71664 | 0.871501 | 6.52E-67 | -1.69E-46 |
| MS.gene052421 | MS.gene71664 | 0.831432 | 1.67E-55 | -1.69E-46 |
| MS.gene052469 | MS.gene71664 | 0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene71664 | 0.837625 | 4.65E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene71664 | 0.822405 | 2.41E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene71664 | 0.889295 | 2.75E-73 | -1.69E-46 |
| MS.gene052982 | MS.gene71664 | 0.823096 | 1.66E-53 | -1.69E-46 |
| MS.gene052999 | MS.gene71664 | 0.832335 | 1.00E-55 | -1.69E-46 |
| MS.gene053169 | MS.gene71664 | 0.882436 | 1.04E-70 | -1.69E-46 |
| MS.gene05316 | MS.gene71664 | 0.847485 | 1.12E-59 | -1.69E-46 |
| MS.gene053209 | MS.gene71664 | 0.843091 | 1.73E-58 | -1.69E-46 |
| MS.gene05335 | MS.gene71664 | 0.804343 | 2.26E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene71664 | 0.843998 | 9.92E-59 | -1.69E-46 |
| MS.gene053557 | MS.gene71664 | 0.822047 | 2.92E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene71664 | 0.871714 | 5.54E-67 | -1.69E-46 |
| MS.gene053813 | MS.gene71664 | 0.831921 | 1.27E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene71664 | 0.848405 | 6.26E-60 | -1.69E-46 |
| MS.gene053912 | MS.gene71664 | 0.822598 | 2.17E-53 | -1.69E-46 |
| MS.gene053928 | MS.gene71664 | 0.846096 | 2.69E-59 | -1.69E-46 |
| MS.gene054010 | MS.gene71664 | 0.850151 | 2.04E-60 | -1.69E-46 |
| MS.gene054011 | MS.gene71664 | 0.844381 | 7.83E-59 | -1.69E-46 |
| MS.gene054012 | MS.gene71664 | 0.843491 | 1.36E-58 | -1.69E-46 |
| MS.gene054013 | MS.gene71664 | 0.840239 | 9.80E-58 | -1.69E-46 |
| MS.gene054123 | MS.gene71664 | 0.822132 | 2.79E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene71664 | 0.869341 | 3.33E-66 | -1.69E-46 |
| MS.gene054349 | MS.gene71664 | 0.894776 | 1.79E-75 | -1.69E-46 |
| MS.gene054556 | MS.gene71664 | 0.910761 | 1.30E-82 | -1.69E-46 |
| MS.gene054719 | MS.gene71664 | 0.855344 | 6.72E-62 | -1.69E-46 |
| MS.gene054920 | MS.gene71664 | 0.801827 | 7.49E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene71664 | 0.803187 | 3.93E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene71664 | 0.806876 | 6.65E-50 | -1.69E-46 |
| MS.gene054955 | MS.gene71664 | 0.827971 | 1.16E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene71664 | 0.819801 | 9.60E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene71664 | 0.887301 | 1.61E-72 | -1.69E-46 |
| MS.gene055277 | MS.gene71664 | 0.840314 | 9.37E-58 | -1.69E-46 |
| MS.gene055369 | MS.gene71664 | 0.848012 | 8.04E-60 | -1.69E-46 |
| MS.gene055390 | MS.gene71664 | 0.807397 | 5.16E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene71664 | 0.815939 | 7.15E-52 | -1.69E-46 |
| MS.gene055428 | MS.gene71664 | 0.803351 | 3.63E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene71664 | 0.847521 | 1.10E-59 | -1.69E-46 |
| MS.gene05553 | MS.gene71664 | 0.861371 | 1.08E-63 | -1.69E-46 |
| MS.gene05556 | MS.gene71664 | 0.800311 | 1.53E-48 | -1.69E-46 |
| MS.gene055604 | MS.gene71664 | 0.859076 | 5.31E-63 | -1.69E-46 |
| MS.gene055666 | MS.gene71664 | 0.866332 | 3.08E-65 | -1.69E-46 |
| MS.gene055741 | MS.gene71664 | 0.856337 | 3.44E-62 | -1.69E-46 |
| MS.gene055744 | MS.gene71664 | 0.86622 | 3.34E-65 | -1.69E-46 |
| MS.gene055859 | MS.gene71664 | 0.811443 | 6.98E-51 | -1.69E-46 |
| MS.gene055909 | MS.gene71664 | 0.871381 | 7.14E-67 | -1.69E-46 |
| MS.gene055911 | MS.gene71664 | 0.879252 | 1.45E-69 | -1.69E-46 |
| MS.gene05594 | MS.gene71664 | 0.815675 | 8.19E-52 | -1.69E-46 |
| MS.gene05602 | MS.gene71664 | 0.810547 | 1.09E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene71664 | 0.860761 | 1.65E-63 | -1.69E-46 |
| MS.gene056330 | MS.gene71664 | -0.802087 | 6.63E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene71664 | 0.871139 | 8.58E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene71664 | 0.835647 | 1.49E-56 | -1.69E-46 |
| MS.gene056422 | MS.gene71664 | 0.821542 | 3.82E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene71664 | 0.874759 | 5.25E-68 | -1.69E-46 |
| MS.gene056514 | MS.gene71664 | 0.816847 | 4.48E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene71664 | 0.802904 | 4.50E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene71664 | 0.878904 | 1.92E-69 | -1.69E-46 |
| MS.gene056723 | MS.gene71664 | 0.847115 | 1.42E-59 | -1.69E-46 |
| MS.gene056796 | MS.gene71664 | 0.829228 | 5.79E-55 | -1.69E-46 |
| MS.gene056876 | MS.gene71664 | 0.815186 | 1.05E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene71664 | -0.801486 | 8.80E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene71664 | 0.857122 | 2.02E-62 | -1.69E-46 |
| MS.gene057019 | MS.gene71664 | 0.809641 | 1.71E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene71664 | 0.826664 | 2.40E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene71664 | 0.803235 | 3.84E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene71664 | 0.804741 | 1.87E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene71664 | 0.843907 | 1.05E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene71664 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene057289 | MS.gene71664 | 0.834308 | 3.23E-56 | -1.69E-46 |
| MS.gene057330 | MS.gene71664 | 0.825273 | 5.13E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene71664 | 0.851608 | 7.94E-61 | -1.69E-46 |
| MS.gene057448 | MS.gene71664 | 0.857746 | 1.32E-62 | -1.69E-46 |
| MS.gene057449 | MS.gene71664 | 0.837305 | 5.62E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene71664 | 0.849309 | 3.51E-60 | -1.69E-46 |
| MS.gene057469 | MS.gene71664 | 0.850424 | 1.71E-60 | -1.69E-46 |
| MS.gene057476 | MS.gene71664 | 0.841311 | 5.13E-58 | -1.69E-46 |
| MS.gene057734 | MS.gene71664 | 0.80433 | 2.28E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene71664 | 0.906615 | 1.23E-80 | -1.69E-46 |
| MS.gene057823 | MS.gene71664 | 0.915671 | 4.46E-85 | -1.69E-46 |
| MS.gene057824 | MS.gene71664 | 0.809188 | 2.14E-50 | -1.69E-46 |
| MS.gene057825 | MS.gene71664 | 0.840762 | 7.15E-58 | -1.69E-46 |
| MS.gene057826 | MS.gene71664 | 0.83398 | 3.90E-56 | -1.69E-46 |
| MS.gene057888 | MS.gene71664 | 0.81097 | 8.85E-51 | -1.69E-46 |
| MS.gene057927 | MS.gene71664 | 0.80488 | 1.75E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene71664 | 0.867138 | 1.71E-65 | -1.69E-46 |
| MS.gene058007 | MS.gene71664 | 0.87857 | 2.52E-69 | -1.69E-46 |
| MS.gene058075 | MS.gene71664 | 0.802144 | 6.45E-49 | -1.69E-46 |
| MS.gene058082 | MS.gene71664 | 0.808251 | 3.39E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene71664 | 0.883952 | 2.90E-71 | -1.69E-46 |
| MS.gene058120 | MS.gene71664 | 0.844827 | 5.94E-59 | -1.69E-46 |
| MS.gene058142 | MS.gene71664 | 0.833923 | 4.04E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene71664 | 0.808519 | 2.98E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene71664 | 0.842703 | 2.20E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene71664 | 0.84408 | 9.43E-59 | -1.69E-46 |
| MS.gene05842 | MS.gene71664 | 0.806957 | 6.39E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene71664 | 0.866178 | 3.45E-65 | -1.69E-46 |
| MS.gene058660 | MS.gene71664 | 0.846328 | 2.33E-59 | -1.69E-46 |
| MS.gene058700 | MS.gene71664 | 0.869851 | 2.27E-66 | -1.69E-46 |
| MS.gene058710 | MS.gene71664 | 0.843323 | 1.50E-58 | -1.69E-46 |
| MS.gene05886 | MS.gene71664 | 0.846316 | 2.34E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene71664 | 0.865832 | 4.44E-65 | -1.69E-46 |
| MS.gene058948 | MS.gene71664 | 0.867237 | 1.59E-65 | -1.69E-46 |
| MS.gene058949 | MS.gene71664 | 0.863377 | 2.60E-64 | -1.69E-46 |
| MS.gene058993 | MS.gene71664 | 0.800288 | 1.55E-48 | -1.69E-46 |
| MS.gene058995 | MS.gene71664 | 0.839903 | 1.20E-57 | -1.69E-46 |
| MS.gene059011 | MS.gene71664 | 0.820923 | 5.31E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene71664 | 0.889916 | 1.58E-73 | -1.69E-46 |
| MS.gene059080 | MS.gene71664 | 0.815459 | 9.14E-52 | -1.69E-46 |
| MS.gene059082 | MS.gene71664 | 0.852234 | 5.28E-61 | -1.69E-46 |
| MS.gene059141 | MS.gene71664 | 0.830158 | 3.44E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene71664 | 0.856491 | 3.10E-62 | -1.69E-46 |
| MS.gene059294 | MS.gene71664 | 0.862061 | 6.62E-64 | -1.69E-46 |
| MS.gene059366 | MS.gene71664 | 0.874212 | 8.06E-68 | -1.69E-46 |
| MS.gene059368 | MS.gene71664 | 0.808806 | 2.58E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene71664 | 0.916909 | 1.01E-85 | -1.69E-46 |
| MS.gene059455 | MS.gene71664 | 0.800701 | 1.27E-48 | -1.69E-46 |
| MS.gene059462 | MS.gene71664 | 0.848928 | 4.48E-60 | -1.69E-46 |
| MS.gene059518 | MS.gene71664 | 0.811542 | 6.64E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene71664 | 0.852664 | 3.98E-61 | -1.69E-46 |
| MS.gene05959 | MS.gene71664 | 0.801872 | 7.33E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene71664 | 0.865788 | 4.58E-65 | -1.69E-46 |
| MS.gene059676 | MS.gene71664 | 0.865359 | 6.25E-65 | -1.69E-46 |
| MS.gene059688 | MS.gene71664 | 0.884493 | 1.83E-71 | -1.69E-46 |
| MS.gene059692 | MS.gene71664 | 0.872252 | 3.67E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene71664 | 0.876076 | 1.86E-68 | -1.69E-46 |
| MS.gene059711 | MS.gene71664 | 0.853826 | 1.85E-61 | -1.69E-46 |
| MS.gene059807 | MS.gene71664 | 0.882629 | 8.87E-71 | -1.69E-46 |
| MS.gene05984 | MS.gene71664 | 0.86958 | 2.78E-66 | -1.69E-46 |
| MS.gene059876 | MS.gene71664 | 0.853555 | 2.21E-61 | -1.69E-46 |
| MS.gene059933 | MS.gene71664 | 0.811291 | 7.53E-51 | -1.69E-46 |
| MS.gene059974 | MS.gene71664 | 0.811107 | 8.26E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene71664 | 0.840057 | 1.09E-57 | -1.69E-46 |
| MS.gene060372 | MS.gene71664 | 0.805191 | 1.50E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene71664 | 0.827371 | 1.62E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene71664 | 0.857957 | 1.15E-62 | -1.69E-46 |
| MS.gene060407 | MS.gene71664 | 0.804944 | 1.69E-49 | -1.69E-46 |
| MS.gene060495 | MS.gene71664 | 0.813374 | 2.64E-51 | -1.69E-46 |
| MS.gene060569 | MS.gene71664 | 0.833745 | 4.47E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene71664 | 0.822826 | 1.92E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene71664 | 0.817264 | 3.61E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene71664 | 0.889272 | 2.81E-73 | -1.69E-46 |
| MS.gene060986 | MS.gene71664 | 0.858253 | 9.35E-63 | -1.69E-46 |
| MS.gene061041 | MS.gene71664 | 0.807932 | 3.97E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene71664 | 0.855556 | 5.83E-62 | -1.69E-46 |
| MS.gene061051 | MS.gene71664 | -0.825385 | 4.82E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene71664 | 0.90188 | 1.71E-78 | -1.69E-46 |
| MS.gene061159 | MS.gene71664 | 0.813935 | 1.99E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71664.t1 | MTR_1g107315 | 97.521 | 242 | 6 | 0 | 1 | 242 | 1 | 242 | 2.33e-175 | 494 |
| MS.gene71664.t1 | MTR_1g107315 | 78.409 | 88 | 17 | 1 | 229 | 314 | 387 | 474 | 8.87e-30 | 118 |
| MS.gene71664.t1 | MTR_1g107350 | 84.298 | 242 | 38 | 0 | 1 | 242 | 1 | 242 | 3.86e-151 | 433 |
| MS.gene71664.t1 | MTR_1g107350 | 70.652 | 92 | 25 | 1 | 229 | 318 | 387 | 478 | 3.12e-33 | 128 |
| MS.gene71664.t1 | MTR_1g032490 | 84.016 | 244 | 37 | 1 | 1 | 242 | 1 | 244 | 2.63e-149 | 428 |
| MS.gene71664.t1 | MTR_1g032490 | 74.699 | 83 | 19 | 1 | 229 | 309 | 389 | 471 | 1.10e-25 | 107 |
| MS.gene71664.t1 | MTR_3g049970 | 80.658 | 243 | 46 | 1 | 1 | 242 | 1 | 243 | 4.52e-142 | 410 |
| MS.gene71664.t1 | MTR_3g049970 | 73.118 | 93 | 23 | 1 | 229 | 319 | 388 | 480 | 4.31e-37 | 138 |
| MS.gene71664.t1 | MTR_8g064880 | 74.286 | 245 | 60 | 2 | 1 | 242 | 1 | 245 | 2.30e-129 | 378 |
| MS.gene71664.t1 | MTR_8g064880 | 63.529 | 85 | 29 | 1 | 229 | 311 | 394 | 478 | 3.88e-19 | 88.2 |
| MS.gene71664.t1 | MTR_8g064870 | 67.537 | 268 | 81 | 3 | 3 | 266 | 6 | 271 | 2.55e-125 | 367 |
| MS.gene71664.t1 | MTR_8g064870 | 65.882 | 85 | 27 | 1 | 229 | 311 | 392 | 476 | 3.14e-27 | 111 |
| MS.gene71664.t1 | MTR_1g107375 | 68.443 | 244 | 66 | 4 | 1 | 242 | 1 | 235 | 2.94e-113 | 336 |
| MS.gene71664.t1 | MTR_1g107375 | 65.882 | 85 | 25 | 2 | 227 | 309 | 372 | 454 | 4.50e-24 | 102 |
| MS.gene71664.t1 | MTR_1g107365 | 67.490 | 243 | 68 | 3 | 3 | 242 | 40 | 274 | 7.89e-112 | 333 |
| MS.gene71664.t1 | MTR_1g107365 | 67.368 | 95 | 27 | 2 | 227 | 319 | 410 | 502 | 5.37e-31 | 122 |
| MS.gene71664.t1 | MTR_1g107360 | 65.833 | 240 | 82 | 0 | 3 | 242 | 4 | 243 | 1.28e-109 | 327 |
| MS.gene71664.t1 | MTR_1g107360 | 75.949 | 79 | 19 | 0 | 241 | 319 | 394 | 472 | 3.59e-33 | 127 |
| MS.gene71664.t1 | MTR_1g107340 | 66.255 | 243 | 81 | 1 | 1 | 242 | 1 | 243 | 5.43e-108 | 315 |
| MS.gene71664.t1 | MTR_1g107285 | 64.198 | 243 | 86 | 1 | 1 | 242 | 1 | 243 | 7.73e-108 | 322 |
| MS.gene71664.t1 | MTR_1g107285 | 72.000 | 75 | 20 | 1 | 241 | 314 | 395 | 469 | 1.13e-27 | 112 |
| MS.gene71664.t1 | MTR_1g107325 | 57.438 | 242 | 48 | 2 | 1 | 242 | 1 | 187 | 1.34e-85 | 262 |
| MS.gene71664.t1 | MTR_1g107325 | 74.737 | 95 | 22 | 1 | 227 | 319 | 269 | 363 | 5.46e-38 | 138 |
| MS.gene71664.t1 | MTR_5g004940 | 49.444 | 180 | 88 | 1 | 8 | 187 | 17 | 193 | 1.16e-56 | 188 |
| MS.gene71664.t1 | MTR_5g004940 | 53.125 | 64 | 30 | 0 | 248 | 311 | 317 | 380 | 2.54e-14 | 73.6 |
| MS.gene71664.t1 | MTR_1g107380 | 32.753 | 287 | 162 | 10 | 8 | 283 | 13 | 279 | 3.41e-36 | 136 |
| MS.gene71664.t1 | MTR_4g095008 | 35.833 | 240 | 143 | 8 | 4 | 242 | 7 | 236 | 4.74e-35 | 134 |
| MS.gene71664.t1 | MTR_8g088560 | 31.441 | 229 | 146 | 3 | 5 | 232 | 7 | 225 | 1.23e-33 | 129 |
| MS.gene71664.t1 | MTR_4g094920 | 36.134 | 238 | 141 | 6 | 6 | 242 | 24 | 251 | 3.45e-29 | 117 |
| MS.gene71664.t1 | MTR_6g038230 | 29.646 | 226 | 148 | 3 | 7 | 232 | 10 | 224 | 3.56e-29 | 116 |
| MS.gene71664.t1 | MTR_5g035580 | 32.735 | 223 | 135 | 5 | 6 | 228 | 11 | 218 | 6.21e-29 | 115 |
| MS.gene71664.t1 | MTR_3g084520 | 32.927 | 246 | 145 | 7 | 6 | 242 | 4 | 238 | 2.34e-28 | 114 |
| MS.gene71664.t1 | MTR_5g035560 | 30.942 | 223 | 139 | 4 | 6 | 228 | 9 | 216 | 2.37e-28 | 114 |
| MS.gene71664.t1 | MTR_3g084540 | 31.641 | 256 | 157 | 6 | 6 | 253 | 4 | 249 | 7.62e-28 | 113 |
| MS.gene71664.t1 | MTR_6g038240 | 29.778 | 225 | 145 | 3 | 8 | 231 | 11 | 223 | 8.44e-28 | 112 |
| MS.gene71664.t1 | MTR_6g038220 | 30.222 | 225 | 143 | 4 | 8 | 231 | 11 | 222 | 1.32e-27 | 112 |
| MS.gene71664.t1 | MTR_6g038200 | 28.000 | 225 | 151 | 3 | 7 | 231 | 10 | 223 | 5.64e-27 | 110 |
| MS.gene71664.t1 | MTR_5g016480 | 33.500 | 200 | 126 | 5 | 1 | 196 | 1 | 197 | 1.42e-25 | 106 |
| MS.gene71664.t1 | MTR_3g084530 | 32.184 | 261 | 149 | 8 | 6 | 253 | 4 | 249 | 1.63e-25 | 106 |
| MS.gene71664.t1 | MTR_6g038300 | 29.075 | 227 | 150 | 4 | 8 | 234 | 11 | 226 | 1.99e-25 | 105 |
| MS.gene71664.t1 | MTR_7g080950 | 28.384 | 229 | 147 | 5 | 4 | 230 | 2 | 215 | 2.00e-23 | 100 |
| MS.gene71664.t1 | MTR_7g080950 | 46.479 | 71 | 36 | 1 | 238 | 308 | 379 | 447 | 6.72e-11 | 63.2 |
| MS.gene71664.t1 | MTR_7g080935 | 28.862 | 246 | 162 | 5 | 8 | 253 | 11 | 243 | 1.03e-22 | 98.2 |
| MS.gene71664.t1 | MTR_7g080940 | 28.125 | 224 | 146 | 5 | 8 | 230 | 11 | 220 | 2.73e-22 | 97.1 |
| MS.gene71664.t1 | MTR_8g083290 | 31.140 | 228 | 131 | 8 | 9 | 224 | 5 | 218 | 6.22e-22 | 96.3 |
| MS.gene71664.t1 | MTR_7g080900 | 25.490 | 306 | 199 | 8 | 3 | 303 | 7 | 288 | 7.38e-20 | 90.1 |
| MS.gene71664.t1 | MTR_8g083280 | 27.799 | 259 | 157 | 8 | 3 | 242 | 2 | 249 | 1.78e-19 | 89.0 |
| MS.gene71664.t1 | MTR_8g083280 | 42.683 | 82 | 46 | 1 | 238 | 318 | 390 | 471 | 3.30e-12 | 67.4 |
| MS.gene71664.t1 | MTR_7g080960 | 27.426 | 237 | 155 | 7 | 3 | 236 | 7 | 229 | 1.07e-18 | 86.7 |
| MS.gene71664.t1 | MTR_8g083300 | 34.028 | 144 | 83 | 3 | 9 | 150 | 8 | 141 | 3.25e-18 | 80.9 |
| MS.gene71664.t1 | MTR_5g464810 | 27.984 | 243 | 154 | 8 | 7 | 233 | 11 | 248 | 4.30e-18 | 85.1 |
| MS.gene71664.t1 | MTR_5g064240 | 27.984 | 243 | 154 | 8 | 7 | 233 | 11 | 248 | 4.30e-18 | 85.1 |
| MS.gene71664.t1 | MTR_3g008010 | 26.562 | 256 | 166 | 8 | 5 | 242 | 5 | 256 | 1.32e-15 | 77.4 |
| MS.gene71664.t1 | MTR_5g464760 | 28.063 | 253 | 157 | 9 | 1 | 233 | 1 | 248 | 1.57e-15 | 77.4 |
| MS.gene71664.t1 | MTR_6g014290 | 26.437 | 261 | 168 | 9 | 1 | 242 | 1 | 256 | 1.65e-15 | 77.4 |
| MS.gene71664.t1 | MTR_0036s0220 | 26.087 | 253 | 165 | 9 | 1 | 237 | 4 | 250 | 2.89e-15 | 76.6 |
| MS.gene71664.t1 | MTR_4g094220 | 25.397 | 252 | 166 | 8 | 8 | 242 | 7 | 253 | 1.09e-14 | 74.7 |
| MS.gene71664.t1 | MTR_3g079480 | 26.562 | 256 | 168 | 9 | 2 | 242 | 15 | 265 | 2.64e-14 | 73.6 |
| MS.gene71664.t1 | MTR_3g479490 | 26.744 | 258 | 153 | 9 | 8 | 242 | 6 | 250 | 2.79e-14 | 73.6 |
| MS.gene71664.t1 | MTR_2g008210 | 26.971 | 241 | 151 | 7 | 8 | 232 | 11 | 242 | 1.59e-13 | 71.2 |
| MS.gene71664.t1 | MTR_6g014300 | 25.820 | 244 | 156 | 9 | 8 | 231 | 12 | 250 | 2.04e-13 | 70.9 |
| MS.gene71664.t1 | MTR_0288s0020 | 23.622 | 254 | 166 | 8 | 1 | 231 | 1 | 249 | 2.19e-13 | 70.9 |
| MS.gene71664.t1 | MTR_6g014250 | 24.609 | 256 | 157 | 8 | 1 | 231 | 1 | 245 | 2.64e-13 | 70.5 |
| MS.gene71664.t1 | MTR_6g013440 | 25.591 | 254 | 144 | 11 | 8 | 231 | 11 | 249 | 3.86e-13 | 70.1 |
| MS.gene71664.t1 | MTR_0199s0010 | 32.571 | 175 | 91 | 9 | 1 | 161 | 1 | 162 | 9.18e-13 | 67.8 |
| MS.gene71664.t1 | MTR_6g014040 | 26.210 | 248 | 151 | 11 | 8 | 231 | 10 | 249 | 1.06e-12 | 68.9 |
| MS.gene71664.t1 | MTR_6g014220 | 26.136 | 264 | 165 | 10 | 1 | 242 | 1 | 256 | 1.32e-12 | 68.6 |
| MS.gene71664.t1 | MTR_7g013220 | 31.373 | 153 | 99 | 3 | 8 | 155 | 5 | 156 | 1.62e-12 | 68.2 |
| MS.gene71664.t1 | MTR_3g479520 | 22.892 | 249 | 174 | 7 | 8 | 242 | 15 | 259 | 2.25e-12 | 67.8 |
| MS.gene71664.t1 | MTR_6g013450 | 25.403 | 248 | 153 | 8 | 8 | 231 | 10 | 249 | 2.76e-12 | 67.4 |
| MS.gene71664.t1 | MTR_7g011470 | 29.362 | 235 | 141 | 8 | 8 | 229 | 10 | 232 | 3.85e-12 | 67.0 |
| MS.gene71664.t1 | MTR_6g014020 | 25.610 | 246 | 154 | 9 | 8 | 231 | 10 | 248 | 4.55e-12 | 67.0 |
| MS.gene71664.t1 | MTR_8g007585 | 32.571 | 175 | 91 | 9 | 1 | 161 | 1 | 162 | 5.54e-12 | 66.2 |
| MS.gene71664.t1 | MTR_7g013180 | 25.600 | 250 | 161 | 10 | 5 | 241 | 2 | 239 | 7.11e-12 | 66.2 |
| MS.gene71664.t1 | MTR_6g014270 | 25.373 | 268 | 161 | 9 | 3 | 242 | 2 | 258 | 9.36e-12 | 65.9 |
| MS.gene71664.t1 | MTR_7g013200 | 34.211 | 152 | 85 | 5 | 8 | 155 | 5 | 145 | 1.73e-11 | 65.1 |
| MS.gene71664.t1 | MTR_6g013960 | 28.378 | 148 | 94 | 4 | 3 | 142 | 5 | 148 | 2.12e-11 | 64.7 |
| MS.gene71664.t1 | MTR_3g479620 | 29.605 | 152 | 100 | 5 | 8 | 156 | 6 | 153 | 2.34e-11 | 62.0 |
| MS.gene71664.t1 | MTR_6g014310 | 26.378 | 254 | 164 | 9 | 8 | 242 | 11 | 260 | 4.05e-11 | 63.9 |
| MS.gene71664.t1 | MTR_6g014187 | 26.842 | 190 | 103 | 7 | 4 | 178 | 6 | 174 | 4.96e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71664.t1 | AT4G15480 | 51.101 | 227 | 110 | 1 | 8 | 233 | 19 | 245 | 1.88e-79 | 250 |
| MS.gene71664.t1 | AT4G15480 | 62.687 | 67 | 25 | 0 | 242 | 308 | 412 | 478 | 4.27e-19 | 88.2 |
| MS.gene71664.t1 | AT3G21560 | 48.750 | 240 | 118 | 4 | 8 | 242 | 12 | 251 | 1.67e-75 | 240 |
| MS.gene71664.t1 | AT3G21560 | 58.904 | 73 | 30 | 0 | 236 | 308 | 400 | 472 | 2.27e-17 | 82.8 |
| MS.gene71664.t1 | AT4G15490 | 45.565 | 248 | 127 | 5 | 1 | 242 | 1 | 246 | 1.83e-71 | 229 |
| MS.gene71664.t1 | AT4G15490 | 52.857 | 70 | 33 | 0 | 242 | 311 | 400 | 469 | 6.82e-15 | 75.5 |
| MS.gene71664.t1 | AT4G15500 | 49.383 | 243 | 106 | 6 | 8 | 242 | 9 | 242 | 3.65e-70 | 226 |
| MS.gene71664.t1 | AT4G15500 | 48.649 | 74 | 38 | 0 | 242 | 315 | 396 | 469 | 1.67e-15 | 77.4 |
| MS.gene71664.t1 | AT2G23260 | 34.008 | 247 | 140 | 9 | 1 | 242 | 1 | 229 | 3.41e-29 | 116 |
| MS.gene71664.t1 | AT2G23210 | 34.286 | 245 | 140 | 8 | 1 | 242 | 1 | 227 | 1.19e-28 | 112 |
| MS.gene71664.t1 | AT2G23250 | 33.906 | 233 | 136 | 8 | 11 | 242 | 1 | 216 | 2.09e-27 | 111 |
| MS.gene71664.t1 | AT4G15550 | 29.880 | 251 | 150 | 8 | 8 | 242 | 13 | 253 | 3.04e-27 | 111 |
| MS.gene71664.t1 | AT4G14090 | 30.488 | 246 | 152 | 5 | 2 | 242 | 7 | 238 | 1.85e-26 | 108 |
| MS.gene71664.t1 | AT2G31750 | 31.224 | 237 | 146 | 7 | 1 | 234 | 1 | 223 | 1.21e-22 | 98.2 |
| MS.gene71664.t1 | AT2G31750 | 31.513 | 238 | 144 | 8 | 1 | 234 | 1 | 223 | 1.53e-22 | 98.2 |
| MS.gene71664.t1 | AT2G43820 | 27.928 | 222 | 133 | 5 | 8 | 224 | 7 | 206 | 2.00e-22 | 97.4 |
| MS.gene71664.t1 | AT1G22400 | 28.151 | 238 | 148 | 7 | 8 | 228 | 13 | 244 | 1.01e-21 | 95.9 |
| MS.gene71664.t1 | AT1G22360 | 29.134 | 254 | 154 | 9 | 1 | 236 | 1 | 246 | 3.27e-21 | 94.4 |
| MS.gene71664.t1 | AT1G22360 | 29.134 | 254 | 154 | 9 | 1 | 236 | 1 | 246 | 4.72e-21 | 93.6 |
| MS.gene71664.t1 | AT1G05680 | 26.407 | 231 | 155 | 7 | 6 | 233 | 4 | 222 | 4.89e-21 | 93.6 |
| MS.gene71664.t1 | AT1G05675 | 26.160 | 237 | 154 | 7 | 6 | 237 | 4 | 224 | 9.74e-21 | 92.8 |
| MS.gene71664.t1 | AT2G43840 | 29.032 | 217 | 137 | 6 | 8 | 224 | 7 | 206 | 2.03e-20 | 91.7 |
| MS.gene71664.t1 | AT2G43840 | 29.032 | 217 | 137 | 6 | 8 | 224 | 7 | 206 | 2.13e-20 | 91.7 |
| MS.gene71664.t1 | AT1G78270 | 27.437 | 277 | 176 | 11 | 2 | 262 | 7 | 274 | 1.15e-18 | 86.7 |
| MS.gene71664.t1 | AT1G22370 | 26.809 | 235 | 159 | 7 | 8 | 233 | 13 | 243 | 1.17e-18 | 86.7 |
| MS.gene71664.t1 | AT1G05530 | 29.289 | 239 | 137 | 9 | 5 | 233 | 2 | 218 | 1.21e-17 | 83.6 |
| MS.gene71664.t1 | AT1G22340 | 27.049 | 244 | 152 | 8 | 8 | 233 | 13 | 248 | 2.08e-17 | 83.2 |
| MS.gene71664.t1 | AT1G05560 | 31.795 | 195 | 97 | 8 | 8 | 191 | 55 | 224 | 2.63e-17 | 82.8 |
| MS.gene71664.t1 | AT1G05560 | 31.795 | 195 | 97 | 8 | 8 | 191 | 5 | 174 | 3.11e-17 | 82.4 |
| MS.gene71664.t1 | AT1G24100 | 26.697 | 221 | 145 | 6 | 8 | 225 | 11 | 217 | 4.37e-17 | 82.0 |
| MS.gene71664.t1 | AT1G22380 | 26.641 | 259 | 166 | 9 | 1 | 242 | 6 | 257 | 4.79e-17 | 82.0 |
| MS.gene71664.t1 | AT2G31790 | 24.242 | 330 | 203 | 10 | 1 | 312 | 1 | 301 | 1.14e-16 | 80.9 |
| MS.gene71664.t1 | AT2G36970 | 23.140 | 242 | 169 | 5 | 8 | 234 | 10 | 249 | 2.16e-11 | 65.1 |
| MS.gene71664.t1 | AT2G15490 | 24.658 | 292 | 184 | 11 | 8 | 283 | 7 | 278 | 2.47e-11 | 64.7 |
| MS.gene71664.t1 | AT2G15490 | 24.658 | 292 | 184 | 11 | 8 | 283 | 7 | 278 | 2.71e-11 | 64.7 |
Find 53 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGAATCTTGATGAATTTA+TGG | 0.173256 | 1.1:-76912610 | MS.gene71664:CDS |
| TTTAGTCAATTTCCATTTCT+AGG | 0.225535 | 1.1:-76913410 | MS.gene71664:CDS |
| GTATTCCTTCTGCTTTGTTA+TGG | 0.253317 | 1.1:-76913577 | MS.gene71664:CDS |
| AGAAATGGAAATTGACTAAA+AGG | 0.259932 | 1.1:+76913413 | None:intergenic |
| CCTAAAAGATTTCCTCTTAG+AGG | 0.280977 | 1.1:+76913740 | None:intergenic |
| CTAAAAGGATGAAGAAAATC+TGG | 0.307810 | 1.1:+76913428 | None:intergenic |
| ATAGAACATCTCAAACTTGT+TGG | 0.346592 | 1.1:-76913713 | MS.gene71664:CDS |
| GGTAATTGAACATCAATATA+AGG | 0.356864 | 1.1:+76913479 | None:intergenic |
| AAGATGAGTGTCCCTAGAAA+TGG | 0.398955 | 1.1:+76913398 | None:intergenic |
| GTAGGGATTAGATTGGGTTA+TGG | 0.399166 | 1.1:-76912783 | MS.gene71664:intron |
| CTATAACTATTTCCACAAAC+TGG | 0.401688 | 1.1:-76913525 | MS.gene71664:CDS |
| ATTGTTTATGATACATGAAA+AGG | 0.404572 | 1.1:+76913640 | None:intergenic |
| TGCTTATTGGAAGCTACAAC+AGG | 0.405883 | 1.1:-76912717 | MS.gene71664:CDS |
| ATCATGCTCTAGTTCTTGAT+AGG | 0.419564 | 1.1:+76913328 | None:intergenic |
| TCACAAACCCATGGAACAAA+AGG | 0.449755 | 1.1:+76913617 | None:intergenic |
| TTTGGTGTAGGGATTAGATT+GGG | 0.453004 | 1.1:-76912789 | MS.gene71664:intron |
| TTAGTCAATTTCCATTTCTA+GGG | 0.453241 | 1.1:-76913409 | MS.gene71664:CDS |
| TTGATCATTTGAGAAACAAA+TGG | 0.467441 | 1.1:+76913686 | None:intergenic |
| GTGAGAGAACCATCACCAAT+TGG | 0.469242 | 1.1:+76913800 | None:intergenic |
| GGGTTTATGTGTCCTTGTGC+TGG | 0.472078 | 1.1:+76913941 | None:intergenic |
| TTGTTTATGATACATGAAAA+GGG | 0.474261 | 1.1:+76913641 | None:intergenic |
| GAGGATGCGGTTGCCGTAGG+TGG | 0.478660 | 1.1:-76912642 | MS.gene71664:CDS |
| AAGGGAAACGTACCAGTTTG+TGG | 0.480432 | 1.1:+76913513 | None:intergenic |
| AGCAAAGTGTCTTGCTGCAA+AGG | 0.493150 | 1.1:-76913906 | MS.gene71664:CDS |
| TTGTATTTAAGAACTTGAAA+AGG | 0.493342 | 1.1:+76913458 | None:intergenic |
| GAAGATGATCATCCTCTAAG+AGG | 0.496341 | 1.1:-76913752 | MS.gene71664:CDS |
| GAAGAAAGCGGCAGAGGATG+CGG | 0.514863 | 1.1:-76912655 | MS.gene71664:CDS |
| ATATAAGGTTCTGTTTCTGA+AGG | 0.523191 | 1.1:+76913494 | None:intergenic |
| GTGCTGGATAAGAGATAAGA+AGG | 0.529561 | 1.1:+76913957 | None:intergenic |
| AAGGATATGAGTGTTTGCTT+CGG | 0.536727 | 1.1:+76913976 | None:intergenic |
| TCAATCTTCGTAAGACCCAT+TGG | 0.541457 | 1.1:-76913281 | MS.gene71664:intron |
| GCAAAGTGTCTTGCTGCAAA+GGG | 0.545350 | 1.1:-76913905 | MS.gene71664:CDS |
| TAAAAGGATGAAGAAAATCT+GGG | 0.548773 | 1.1:+76913429 | None:intergenic |
| CACTTTGCTAGTCTAAGAAG+AGG | 0.557139 | 1.1:+76913920 | None:intergenic |
| GCAGAGGATGCGGTTGCCGT+AGG | 0.563630 | 1.1:-76912645 | MS.gene71664:CDS |
| GAAGTGGAAGAAAGCGGCAG+AGG | 0.565645 | 1.1:-76912661 | MS.gene71664:CDS |
| CCGTAGGTGGATCCTCTGAT+CGG | 0.574855 | 1.1:-76912629 | MS.gene71664:CDS |
| TTCATCACAACAGAGAAAGC+TGG | 0.577898 | 1.1:-76913869 | MS.gene71664:CDS |
| TCACTCACTCCAATTGGTGA+TGG | 0.584522 | 1.1:-76913809 | MS.gene71664:CDS |
| TGAATCCATAACAAAGCAGA+AGG | 0.585284 | 1.1:+76913572 | None:intergenic |
| CTTATCTCTTATCCAGCACA+AGG | 0.587114 | 1.1:-76913953 | MS.gene71664:CDS |
| TATAAGGTTCTGTTTCTGAA+GGG | 0.593373 | 1.1:+76913495 | None:intergenic |
| ACTTTGCTAGTCTAAGAAGA+GGG | 0.596564 | 1.1:+76913921 | None:intergenic |
| TTCATCAAGATTCCGATCAG+AGG | 0.604344 | 1.1:+76912617 | None:intergenic |
| TAAATTAGTAACAAGAGATG+AGG | 0.604740 | 1.1:-76912748 | MS.gene71664:CDS |
| CTTATTGGAAGCTACAACAG+GGG | 0.618372 | 1.1:-76912715 | MS.gene71664:CDS |
| CCGATCAGAGGATCCACCTA+CGG | 0.631198 | 1.1:+76912629 | None:intergenic |
| TCGGAATATTAACAGTGCCA+CGG | 0.633212 | 1.1:+76912574 | None:intergenic |
| TGCAATGAAGTGGAAGAAAG+CGG | 0.637939 | 1.1:-76912667 | MS.gene71664:CDS |
| TCAGCTACATCACAAACCCA+TGG | 0.646612 | 1.1:+76913608 | None:intergenic |
| GCTTATTGGAAGCTACAACA+GGG | 0.662731 | 1.1:-76912716 | MS.gene71664:CDS |
| ATGGAAGACATTCAGAACCG+TGG | 0.696567 | 1.1:-76912591 | MS.gene71664:CDS |
| TGTGATGTAGCTGATGAACA+TGG | 0.703527 | 1.1:-76913599 | MS.gene71664:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATTGTAATATTATAGAG+TGG | - | chr1.1:76913356-76913375 | MS.gene71664:CDS | 20.0% |
| !! | ATTGTTTATGATACATGAAA+AGG | + | chr1.1:76912912-76912931 | None:intergenic | 20.0% |
| !! | TTGTATTTAAGAACTTGAAA+AGG | + | chr1.1:76913094-76913113 | None:intergenic | 20.0% |
| !! | TTGTTTATGATACATGAAAA+GGG | + | chr1.1:76912911-76912930 | None:intergenic | 20.0% |
| !! | TTTCACAATCCAAATATTAA+AGG | - | chr1.1:76913298-76913317 | MS.gene71664:CDS | 20.0% |
| !!! | CTGTGATTTATATTTCTTTT+GGG | - | chr1.1:76913401-76913420 | MS.gene71664:CDS | 20.0% |
| !!! | TCTGTGATTTATATTTCTTT+TGG | - | chr1.1:76913400-76913419 | MS.gene71664:CDS | 20.0% |
| !!! | TTTTTTGCACCTTTAATATT+TGG | + | chr1.1:76913310-76913329 | None:intergenic | 20.0% |
| ! | AAGTGAATGAAATAGCATAT+GGG | - | chr1.1:76913449-76913468 | MS.gene71664:CDS | 25.0% |
| ! | AGAAATGGAAATTGACTAAA+AGG | + | chr1.1:76913139-76913158 | None:intergenic | 25.0% |
| ! | ATATTTGGATTGTGAAACAA+TGG | + | chr1.1:76913295-76913314 | None:intergenic | 25.0% |
| ! | GGTAATTGAACATCAATATA+AGG | + | chr1.1:76913073-76913092 | None:intergenic | 25.0% |
| ! | TAAAAGGATGAAGAAAATCT+GGG | + | chr1.1:76913123-76913142 | None:intergenic | 25.0% |
| ! | TAAATTAGTAACAAGAGATG+AGG | - | chr1.1:76913801-76913820 | MS.gene71664:CDS | 25.0% |
| ! | TTAGTCAATTTCCATTTCTA+GGG | - | chr1.1:76913140-76913159 | MS.gene71664:intron | 25.0% |
| ! | TTGATCATTTGAGAAACAAA+TGG | + | chr1.1:76912866-76912885 | None:intergenic | 25.0% |
| ! | TTTAGTCAATTTCCATTTCT+AGG | - | chr1.1:76913139-76913158 | MS.gene71664:intron | 25.0% |
| !! | AAATTCTTGGTAGATGTTTT+TGG | - | chr1.1:76913742-76913761 | MS.gene71664:CDS | 25.0% |
| !! | ATATAAATCACAGAACCTTT+TGG | + | chr1.1:76913394-76913413 | None:intergenic | 25.0% |
| AGTCACAAATGCAAAATTCT+TGG | - | chr1.1:76913729-76913748 | MS.gene71664:CDS | 30.0% | |
| ATAGAACATCTCAAACTTGT+TGG | - | chr1.1:76912836-76912855 | MS.gene71664:intron | 30.0% | |
| ATTTCATTCACTTGTTCTTG+TGG | + | chr1.1:76913442-76913461 | None:intergenic | 30.0% | |
| CAAGTGAATGAAATAGCATA+TGG | - | chr1.1:76913448-76913467 | MS.gene71664:CDS | 30.0% | |
| CTAAAAGGATGAAGAAAATC+TGG | + | chr1.1:76913124-76913143 | None:intergenic | 30.0% | |
| CTATAACTATTTCCACAAAC+TGG | - | chr1.1:76913024-76913043 | MS.gene71664:intron | 30.0% | |
| TCGGAATCTTGATGAATTTA+TGG | - | chr1.1:76913939-76913958 | MS.gene71664:CDS | 30.0% | |
| TGAAGAAAAATGCAATGAAG+TGG | - | chr1.1:76913872-76913891 | MS.gene71664:CDS | 30.0% | |
| ! | AAACAATCCTTTTGTTCCAT+GGG | - | chr1.1:76912925-76912944 | MS.gene71664:intron | 30.0% |
| ! | AAAGAACATAATTTGCCAGT+TGG | - | chr1.1:76913535-76913554 | MS.gene71664:CDS | 30.0% |
| ! | AAAGGTGCAAAAAATATTCG+TGG | - | chr1.1:76913316-76913335 | MS.gene71664:CDS | 30.0% |
| ! | AAGAACATAATTTGCCAGTT+GGG | - | chr1.1:76913536-76913555 | MS.gene71664:CDS | 30.0% |
| ! | TAAACAATCCTTTTGTTCCA+TGG | - | chr1.1:76912924-76912943 | MS.gene71664:intron | 30.0% |
| ! | TGAAATAGCATATGGGTTAT+TGG | - | chr1.1:76913456-76913475 | MS.gene71664:CDS | 30.0% |
| !! | ATATAAGGTTCTGTTTCTGA+AGG | + | chr1.1:76913058-76913077 | None:intergenic | 30.0% |
| !! | ATTCTCAAGTATCGTTTTTG+TGG | - | chr1.1:76913479-76913498 | MS.gene71664:CDS | 30.0% |
| !! | TATAAGGTTCTGTTTCTGAA+GGG | + | chr1.1:76913057-76913076 | None:intergenic | 30.0% |
| !! | TTCTCAAGTATCGTTTTTGT+GGG | - | chr1.1:76913480-76913499 | MS.gene71664:CDS | 30.0% |
| !!! | ACTTTTGAGTTCTTAGATGA+TGG | - | chr1.1:76912770-76912789 | MS.gene71664:CDS | 30.0% |
| AAGGATATGAGTGTTTGCTT+CGG | + | chr1.1:76912576-76912595 | None:intergenic | 35.0% | |
| AATGTTGACATTTCCAGCAT+GGG | - | chr1.1:76913699-76913718 | MS.gene71664:CDS | 35.0% | |
| AGAGAGGAAAAGTTGTGAAA+TGG | - | chr1.1:76913578-76913597 | MS.gene71664:CDS | 35.0% | |
| ATTGTGAAACAATGGACCAA+TGG | + | chr1.1:76913287-76913306 | None:intergenic | 35.0% | |
| CCTAAAAGATTTCCTCTTAG+AGG | + | chr1.1:76912812-76912831 | None:intergenic | 35.0% | |
| GAAAAATCACTCACTCCAAT+TGG | - | chr1.1:76912734-76912753 | MS.gene71664:CDS | 35.0% | |
| TGAATCCATAACAAAGCAGA+AGG | + | chr1.1:76912980-76912999 | None:intergenic | 35.0% | |
| TTGTGAAACAATGGACCAAT+GGG | + | chr1.1:76913286-76913305 | None:intergenic | 35.0% | |
| TTGTGGTTGGAATTCATCAA+TGG | - | chr1.1:76913654-76913673 | MS.gene71664:CDS | 35.0% | |
| ! | ACTTTGCTAGTCTAAGAAGA+GGG | + | chr1.1:76912631-76912650 | None:intergenic | 35.0% |
| ! | GTATTCCTTCTGCTTTGTTA+TGG | - | chr1.1:76912972-76912991 | MS.gene71664:intron | 35.0% |
| ! | TTTGGTGTAGGGATTAGATT+GGG | - | chr1.1:76913760-76913779 | MS.gene71664:CDS | 35.0% |
| !! | ATCAATGGAAGCACTTACTT+TGG | - | chr1.1:76913669-76913688 | MS.gene71664:CDS | 35.0% |
| !! | ATCATGCTCTAGTTCTTGAT+AGG | + | chr1.1:76913224-76913243 | None:intergenic | 35.0% |
| !! | CCTCTAAGAGGAAATCTTTT+AGG | - | chr1.1:76912809-76912828 | MS.gene71664:intron | 35.0% |
| !! | TCAATGGAAGCACTTACTTT+GGG | - | chr1.1:76913670-76913689 | MS.gene71664:CDS | 35.0% |
| !! | TGAGGTGAAAAAGTGCTTAT+TGG | - | chr1.1:76913819-76913838 | MS.gene71664:CDS | 35.0% |
| !! | TTTTGGTGTAGGGATTAGAT+TGG | - | chr1.1:76913759-76913778 | MS.gene71664:CDS | 35.0% |
| !!! | TGGTAGATGTTTTTGGTGTA+GGG | - | chr1.1:76913749-76913768 | MS.gene71664:CDS | 35.0% |
| !!! | TTGGTAGATGTTTTTGGTGT+AGG | - | chr1.1:76913748-76913767 | MS.gene71664:CDS | 35.0% |
| AAGATGAGTGTCCCTAGAAA+TGG | + | chr1.1:76913154-76913173 | None:intergenic | 40.0% | |
| ATGTTGACATTTCCAGCATG+GGG | - | chr1.1:76913700-76913719 | MS.gene71664:CDS | 40.0% | |
| CAATGTTGACATTTCCAGCA+TGG | - | chr1.1:76913698-76913717 | MS.gene71664:CDS | 40.0% | |
| CATGCTGGAAATGTCAACAT+TGG | + | chr1.1:76913700-76913719 | None:intergenic | 40.0% | |
| CTTATCTCTTATCCAGCACA+AGG | - | chr1.1:76912596-76912615 | MS.gene71664:CDS | 40.0% | |
| CTTATTGGAAGCTACAACAG+GGG | - | chr1.1:76913834-76913853 | MS.gene71664:CDS | 40.0% | |
| GAAGATGATCATCCTCTAAG+AGG | - | chr1.1:76912797-76912816 | MS.gene71664:intron | 40.0% | |
| GCATGTTTCGTAACACATTG+TGG | - | chr1.1:76913637-76913656 | MS.gene71664:CDS | 40.0% | |
| GCTTATTGGAAGCTACAACA+GGG | - | chr1.1:76913833-76913852 | MS.gene71664:CDS | 40.0% | |
| GTAGGGATTAGATTGGGTTA+TGG | - | chr1.1:76913766-76913785 | MS.gene71664:CDS | 40.0% | |
| GTGCTGGATAAGAGATAAGA+AGG | + | chr1.1:76912595-76912614 | None:intergenic | 40.0% | |
| GTGGGTATTAAAACCACCTT+CGG | - | chr1.1:76913498-76913517 | MS.gene71664:CDS | 40.0% | |
| GTTTCGTAACACATTGTGGT+TGG | - | chr1.1:76913641-76913660 | MS.gene71664:CDS | 40.0% | |
| TCAATCTTCGTAAGACCCAT+TGG | - | chr1.1:76913268-76913287 | MS.gene71664:intron | 40.0% | |
| TCACAAACCCATGGAACAAA+AGG | + | chr1.1:76912935-76912954 | None:intergenic | 40.0% | |
| TCGGAATATTAACAGTGCCA+CGG | + | chr1.1:76913978-76913997 | None:intergenic | 40.0% | |
| TGAGCCAATACTTCTTCTTG+TGG | + | chr1.1:76913607-76913626 | None:intergenic | 40.0% | |
| TGCAATGAAGTGGAAGAAAG+CGG | - | chr1.1:76913882-76913901 | MS.gene71664:CDS | 40.0% | |
| TGCTTATTGGAAGCTACAAC+AGG | - | chr1.1:76913832-76913851 | MS.gene71664:CDS | 40.0% | |
| TGGCTAAACACAAAGCCAAA+AGG | - | chr1.1:76913376-76913395 | MS.gene71664:CDS | 40.0% | |
| TGTGATGTAGCTGATGAACA+TGG | - | chr1.1:76912950-76912969 | MS.gene71664:intron | 40.0% | |
| TTAGAGGAAACAAGTGAGAG+AGG | - | chr1.1:76913562-76913581 | MS.gene71664:CDS | 40.0% | |
| TTCATCAAGATTCCGATCAG+AGG | + | chr1.1:76913935-76913954 | None:intergenic | 40.0% | |
| TTCATCACAACAGAGAAAGC+TGG | - | chr1.1:76912680-76912699 | MS.gene71664:CDS | 40.0% | |
| ! | CACTTTGCTAGTCTAAGAAG+AGG | + | chr1.1:76912632-76912651 | None:intergenic | 40.0% |
| ! | GAGTCCACAAGAAGAAGTAT+TGG | - | chr1.1:76913600-76913619 | MS.gene71664:CDS | 40.0% |
| AAACCACCTTCGGAGGAATT+AGG | - | chr1.1:76913508-76913527 | MS.gene71664:CDS | 45.0% | |
| AACCACCTTCGGAGGAATTA+GGG | - | chr1.1:76913509-76913528 | MS.gene71664:CDS | 45.0% | |
| AAGGGAAACGTACCAGTTTG+TGG | + | chr1.1:76913039-76913058 | None:intergenic | 45.0% | |
| ATGGAAGACATTCAGAACCG+TGG | - | chr1.1:76913958-76913977 | MS.gene71664:CDS | 45.0% | |
| GGTATTAAAACCACCTTCGG+AGG | - | chr1.1:76913501-76913520 | MS.gene71664:CDS | 45.0% | |
| GTAAGCAGCAAAAACAGCAG+TGG | + | chr1.1:76913005-76913024 | None:intergenic | 45.0% | |
| GTGAGAGAACCATCACCAAT+TGG | + | chr1.1:76912752-76912771 | None:intergenic | 45.0% | |
| GTTACGAAACATGCCACTGA+TGG | + | chr1.1:76913631-76913650 | None:intergenic | 45.0% | |
| TACAACAGGGGAAAAAGCAG+AGG | - | chr1.1:76913846-76913865 | MS.gene71664:CDS | 45.0% | |
| TCACTCACTCCAATTGGTGA+TGG | - | chr1.1:76912740-76912759 | MS.gene71664:CDS | 45.0% | |
| TCAGCTACATCACAAACCCA+TGG | + | chr1.1:76912944-76912963 | None:intergenic | 45.0% | |
| TTTAGCCCTAATTCCTCCGA+AGG | + | chr1.1:76913517-76913536 | None:intergenic | 45.0% | |
| TTTGCCAGTTGGGTTCTTAG+AGG | - | chr1.1:76913546-76913565 | MS.gene71664:CDS | 45.0% | |
| ! | AGCAAAGTGTCTTGCTGCAA+AGG | - | chr1.1:76912643-76912662 | MS.gene71664:CDS | 45.0% |
| ! | GCAAAGTGTCTTGCTGCAAA+GGG | - | chr1.1:76912644-76912663 | MS.gene71664:CDS | 45.0% |
| ! | GTTTCCTCTAAGAACCCAAC+TGG | + | chr1.1:76913553-76913572 | None:intergenic | 45.0% |
| !! | AGTATTGGCTCATCCATCAG+TGG | - | chr1.1:76913615-76913634 | MS.gene71664:CDS | 45.0% |
| GGGTTTATGTGTCCTTGTGC+TGG | + | chr1.1:76912611-76912630 | None:intergenic | 50.0% | |
| AGCCCTAATTCCTCCGAAGG+TGG | + | chr1.1:76913514-76913533 | None:intergenic | 55.0% | |
| CCGATCAGAGGATCCACCTA+CGG | + | chr1.1:76913923-76913942 | None:intergenic | 55.0% | |
| CCGTAGGTGGATCCTCTGAT+CGG | - | chr1.1:76913920-76913939 | MS.gene71664:CDS | 55.0% | |
| GAAGAAAGCGGCAGAGGATG+CGG | - | chr1.1:76913894-76913913 | MS.gene71664:CDS | 55.0% | |
| GAAGTGGAAGAAAGCGGCAG+AGG | - | chr1.1:76913888-76913907 | MS.gene71664:CDS | 55.0% | |
| GTGACTTGATCACCCCATGC+TGG | + | chr1.1:76913715-76913734 | None:intergenic | 55.0% | |
| GAGGATGCGGTTGCCGTAGG+TGG | - | chr1.1:76913907-76913926 | MS.gene71664:CDS | 65.0% | |
| GCAGAGGATGCGGTTGCCGT+AGG | - | chr1.1:76913904-76913923 | MS.gene71664:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 76912566 | 76914005 | 76912566 | ID=MS.gene71664 |
| chr1.1 | mRNA | 76912566 | 76914005 | 76912566 | ID=MS.gene71664.t1;Parent=MS.gene71664 |
| chr1.1 | exon | 76913282 | 76914005 | 76913282 | ID=MS.gene71664.t1.exon1;Parent=MS.gene71664.t1 |
| chr1.1 | CDS | 76913282 | 76914005 | 76913282 | ID=cds.MS.gene71664.t1;Parent=MS.gene71664.t1 |
| chr1.1 | exon | 76912566 | 76912801 | 76912566 | ID=MS.gene71664.t1.exon2;Parent=MS.gene71664.t1 |
| chr1.1 | CDS | 76912566 | 76912801 | 76912566 | ID=cds.MS.gene71664.t1;Parent=MS.gene71664.t1 |
| Gene Sequence |
| Protein sequence |
