AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85059


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85059.t1 MTR_4g036495 96.608 678 23 0 1 678 1 678 0.0 1359
MS.gene85059.t1 MTR_8g077185 33.103 290 177 8 404 680 84 369 7.87e-39 148
MS.gene85059.t1 MTR_5g056200 29.641 334 205 10 362 675 16 339 8.26e-33 130
MS.gene85059.t1 MTR_1g076920 30.820 305 177 10 398 673 88 387 3.00e-24 105
MS.gene85059.t1 MTR_3g108700 25.634 355 164 11 38 358 97 385 1.13e-16 84.3
MS.gene85059.t1 MTR_1g088420 29.293 198 118 6 38 218 119 311 2.19e-16 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85059.t1 AT4G25290 53.304 681 305 6 3 679 2 673 0.0 756
MS.gene85059.t1 AT4G36530 32.753 287 168 8 404 673 27 305 1.80e-35 137
MS.gene85059.t1 AT4G36530 32.753 287 168 8 404 673 84 362 7.29e-35 137
MS.gene85059.t1 AT5G19850 32.526 289 176 8 401 675 75 358 4.23e-32 128
MS.gene85059.t1 AT5G38520 28.664 307 185 11 399 678 62 361 1.13e-22 100
MS.gene85059.t1 AT5G38520 27.900 319 184 11 399 678 62 373 1.53e-21 97.8
MS.gene85059.t1 AT5G13800 26.911 327 181 11 411 687 127 445 3.54e-20 95.1
MS.gene85059.t1 AT5G13800 26.829 328 180 12 411 687 104 422 4.09e-20 94.7
MS.gene85059.t1 AT5G13800 26.829 328 180 12 411 687 104 422 4.09e-20 94.7
MS.gene85059.t1 AT5G13800 26.733 303 167 10 411 663 104 401 6.49e-16 80.9
MS.gene85059.t1 AT5G24850 25.731 342 164 10 39 358 86 359 1.03e-15 81.3
MS.gene85059.t1 AT2G47590 29.189 185 117 4 42 213 120 303 1.43e-14 77.0

Find 168 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATCATTTATTGCACTATT+TGG 0.145894 4.2:-67498081 MS.gene85059:CDS
GGCTGCATATTTGAGGTATT+TGG 0.200869 4.2:-67498598 MS.gene85059:CDS
AGCTCAGTATATACAATATT+TGG 0.206734 4.2:+67497252 None:intergenic
ATTTGGTCCTGCGCTGTCTT+TGG 0.222263 4.2:-67498064 MS.gene85059:CDS
GTTTGGGCTATTACATTGTT+AGG 0.229050 4.2:-67497294 MS.gene85059:CDS
TGATGATATAATGGGATTTA+TGG 0.245583 4.2:-67498835 MS.gene85059:CDS
TGGAACTAAGGATTGAAAAT+TGG 0.254734 4.2:+67503143 None:intergenic
CGGTGATCGAATACATAAAT+TGG 0.258554 4.2:+67503123 None:intergenic
GTTCTTCTTGTACATGGTTT+TGG 0.264043 4.2:-67497375 MS.gene85059:CDS
TGGCTAGTGGTACTGGCTTT+TGG 0.265022 4.2:-67497756 MS.gene85059:intron
TTGTGATGGTGTTATAATTA+AGG 0.274721 4.2:-67495823 MS.gene85059:CDS
TCTGTGTTTGTTACACAAAA+AGG 0.298646 4.2:-67498663 MS.gene85059:CDS
TCCTGTGCATGATGATATAA+TGG 0.300688 4.2:-67498844 MS.gene85059:CDS
GCGGGAAAGTGAGGGAAAAT+TGG 0.306215 4.2:+67503287 None:intergenic
CTAGAGCTGGAAATCGAGTT+TGG 0.313646 4.2:-67497311 MS.gene85059:CDS
TCTAATCTTATGATTAAGTT+TGG 0.324364 4.2:-67502940 MS.gene85059:CDS
GTGGCATTGGAGTCAGAAAT+TGG 0.327611 4.2:+67495867 None:intergenic
GTCTTCCACATTTCAATCCT+TGG 0.329388 4.2:+67502104 None:intergenic
AGGATAGTATTCACTGATTC+TGG 0.333253 4.2:+67495662 None:intergenic
AACATTACCTGGTGCAGAAA+TGG 0.339638 4.2:-67499014 MS.gene85059:CDS
CCTGCTGTTCTTCTTGTACA+TGG 0.339681 4.2:-67497381 MS.gene85059:CDS
TTTGGTCCTGCGCTGTCTTT+GGG 0.340755 4.2:-67498063 MS.gene85059:CDS
TAAAGCTAAAGATGCTTTCC+AGG 0.341211 4.2:+67496082 None:intergenic
CACCTTGTTGGCAACTCAAT+TGG 0.341981 4.2:-67497174 MS.gene85059:CDS
TCCTGGTGTGCCTGTGGTCC+TGG 0.356320 4.2:-67496100 MS.gene85059:CDS
CACACAGGCTCTGCAAAATC+TGG 0.361519 4.2:-67499098 MS.gene85059:intron
GCTATTACATTGTTAGGGTT+TGG 0.368642 4.2:-67497288 MS.gene85059:CDS
TGCTGAAATCTAGTGAGAAC+AGG 0.371964 4.2:-67498734 MS.gene85059:CDS
TTGCTATTGTTGCTCGAGTT+TGG 0.384643 4.2:-67496984 MS.gene85059:CDS
TGCAGAAATGGAACTAGATT+GGG 0.385193 4.2:-67499002 MS.gene85059:CDS
GCAGGGTTCTTATCTCCCTT+TGG 0.386221 4.2:-67497982 MS.gene85059:CDS
GACAAACGTCAGTGACTTCA+TGG 0.391121 4.2:-67496436 MS.gene85059:CDS
TTCTGATGAAATGCTGGAAC+TGG 0.395021 4.2:-67503010 MS.gene85059:CDS
TGAATACTATCCTTTGTGAT+TGG 0.400538 4.2:-67495652 MS.gene85059:CDS
CTGATTCTGGCACTTCATCA+TGG 0.403175 4.2:+67495675 None:intergenic
GACTTTATTGTTGATGTTGT+GGG 0.414569 4.2:-67497207 MS.gene85059:CDS
GTGCAGAAATGGAACTAGAT+TGG 0.418108 4.2:-67499003 MS.gene85059:CDS
AAGTAGACTCAAGGTCAGTA+TGG 0.424069 4.2:-67494842 MS.gene85059:CDS
GACCTTGAGTCTACTTCCCT+TGG 0.428778 4.2:+67494849 None:intergenic
CATATCAAGTCTTATGATCC+TGG 0.441605 4.2:-67496117 MS.gene85059:intron
GGAAAAGATTCTAATTATAC+AGG 0.443244 4.2:-67496019 MS.gene85059:intron
GGGGAACCGGTCCACCTTGT+TGG 0.443402 4.2:-67497186 MS.gene85059:CDS
GTAACAAACACAGATTCATT+TGG 0.444156 4.2:+67498672 None:intergenic
TGTTCGCTGTTCGAGATTTG+AGG 0.445241 4.2:-67502984 MS.gene85059:CDS
ATGCATTGGCTGCATATTTG+AGG 0.450155 4.2:-67498605 MS.gene85059:CDS
CAACTGACACCGCCATTGTA+TGG 0.452717 4.2:-67503218 MS.gene85059:CDS
CTTCAGCTTTCAACATTACC+TGG 0.455179 4.2:-67499025 MS.gene85059:CDS
AGGGAACGGCTCGTGATGAT+TGG 0.459477 4.2:-67498575 MS.gene85059:CDS
AAGCATAGCCACTGTGGCAT+TGG 0.460190 4.2:+67495854 None:intergenic
CTCAACTGCTGCTGCAATGG+TGG 0.464086 4.2:+67497948 None:intergenic
AGACTTTATTGTTGATGTTG+TGG 0.466885 4.2:-67497208 MS.gene85059:CDS
CCATCGTTTGAAATCGATCA+AGG 0.468948 4.2:-67502141 MS.gene85059:CDS
GAAGCTGCAGTGAGGAGTCC+AGG 0.469715 4.2:+67503165 None:intergenic
TAGAGCTGGAAATCGAGTTT+GGG 0.469953 4.2:-67497310 MS.gene85059:CDS
TATACAATTGCCGGTGAAGA+TGG 0.471229 4.2:-67497405 MS.gene85059:CDS
GAATACATAAATTGGAACTA+AGG 0.471279 4.2:+67503131 None:intergenic
TTTAGGGAAGCGGGAAAGTG+AGG 0.471514 4.2:+67503278 None:intergenic
CGTGCTTCAGAAAGTCGAAA+TGG 0.475834 4.2:-67498105 MS.gene85059:CDS
CCGTGACAACATACACGGTT+TGG 0.476794 4.2:-67497334 MS.gene85059:CDS
AGATCGAAAGGGCAGATGAT+TGG 0.478592 4.2:-67496256 MS.gene85059:CDS
AAGAAGATAGTTAAGAGGTA+TGG 0.479952 4.2:+67496053 None:intergenic
ACATCAGGTGAAACCTTGTT+AGG 0.480009 4.2:-67498765 MS.gene85059:CDS
TTTGGGCTATTACATTGTTA+GGG 0.480583 4.2:-67497293 MS.gene85059:CDS
TTGTATATACTGAGCTCTTG+TGG 0.481245 4.2:-67497245 MS.gene85059:CDS
TGTATATACTGAGCTCTTGT+GGG 0.481366 4.2:-67497244 MS.gene85059:CDS
TGATTCTGGCACTTCATCAT+GGG 0.483873 4.2:+67495676 None:intergenic
ATAATTAAGGAATTAGATGC+TGG 0.485194 4.2:-67495810 MS.gene85059:intron
CAAAGCTACTTGTGTATTTG+CGG 0.486980 4.2:-67502210 MS.gene85059:CDS
GTCCAGGGTGATCGTCTGTT+CGG 0.487765 4.2:+67503181 None:intergenic
AGGGGTTTCGTGTTGAGACT+TGG 0.493078 4.2:-67494873 MS.gene85059:CDS
AACGTCAGTGACTTCATGGT+TGG 0.493568 4.2:-67496432 MS.gene85059:CDS
AAAGGAAATGTTGTTGGAGG+TGG 0.498142 4.2:-67498645 MS.gene85059:CDS
AGGAAGTCGTTGAAAGGTCG+TGG 0.502944 4.2:-67502964 MS.gene85059:CDS
CACCATTGCAGCAGCAGTTG+AGG 0.503650 4.2:-67497947 MS.gene85059:CDS
CAGCATTTCTCTGCCTAACA+AGG 0.504064 4.2:+67498752 None:intergenic
TATGAGAAAGAACGAAATGC+AGG 0.505695 4.2:-67498000 MS.gene85059:CDS
CCTGTGCATGATGATATAAT+GGG 0.506674 4.2:-67498843 MS.gene85059:CDS
AGAAATCAGATAAATAATGA+TGG 0.509438 4.2:-67497728 MS.gene85059:CDS
AGTCATCTCTTGATTTATGT+CGG 0.511289 4.2:+67498805 None:intergenic
AGCCTCAACTGCTGCTGCAA+TGG 0.511346 4.2:+67497945 None:intergenic
GAAAACAGTCAACACGGGTA+TGG 0.511478 4.2:-67497706 MS.gene85059:CDS
GTATGAGCTCTGCTTTATCA+TGG 0.513231 4.2:-67502174 MS.gene85059:CDS
AGTCAACACGGGTATGGAGC+TGG 0.515119 4.2:-67497700 MS.gene85059:CDS
ATTGTCTTGATAAACAGTGC+TGG 0.518060 4.2:-67496943 MS.gene85059:CDS
GATTTGAGGAAGTCGTTGAA+AGG 0.518260 4.2:-67502970 MS.gene85059:CDS
CTTGTTGGCAACTCAATTGG+TGG 0.520296 4.2:-67497171 MS.gene85059:intron
TCCTTTGTGATTGGATACAA+AGG 0.520584 4.2:-67495643 MS.gene85059:CDS
CTTACACTTGGCTTAGACAA+TGG 0.522594 4.2:+67496892 None:intergenic
TCTTCAAGAAGATAGTTAAG+AGG 0.526413 4.2:+67496048 None:intergenic
CTATCTTCTTGAAGATGTCA+AGG 0.530261 4.2:-67496040 MS.gene85059:CDS
TGCATATTTGAGGTATTTGG+AGG 0.532972 4.2:-67498595 MS.gene85059:CDS
TCGTGTTGAGACTTGGTCCA+AGG 0.533727 4.2:-67494866 MS.gene85059:CDS
AAGGAAAATGCGGGAAAGTG+AGG 0.535206 4.2:+67503310 None:intergenic
ACGTCAGTGACTTCATGGTT+GGG 0.536315 4.2:-67496431 MS.gene85059:CDS
GATACACCAGCTTGCTACTC+AGG 0.536461 4.2:-67502902 MS.gene85059:intron
CCTTTGTGATTGGATACAAA+GGG 0.536638 4.2:-67495642 MS.gene85059:CDS
ATATAATGTACTAAATGCAT+TGG 0.537147 4.2:-67498619 MS.gene85059:CDS
CGTGTTGAGACTTGGTCCAA+GGG 0.550340 4.2:-67494865 MS.gene85059:CDS
TCAATCCTTGGAGTGCCTTG+TGG 0.551423 4.2:+67502116 None:intergenic
TTGTCTTGATAAACAGTGCT+GGG 0.551930 4.2:-67496942 MS.gene85059:CDS
TTTGAGGTATTTGGAGGGAA+CGG 0.551995 4.2:-67498589 MS.gene85059:CDS
GACATAAATCAAGAGATGAC+TGG 0.552493 4.2:-67498803 MS.gene85059:CDS
TACAATGGCGGTGTCAGTTG+CGG 0.552980 4.2:+67503221 None:intergenic
TGTATTTGCGGAACAAGAGG+TGG 0.556168 4.2:-67502198 MS.gene85059:CDS
TCTAGTTCCATTTCTGCACC+AGG 0.556644 4.2:+67499007 None:intergenic
ACACGGGTATGGAGCTGGAA+TGG 0.558876 4.2:-67497695 MS.gene85059:CDS
AGATGACTGGAATTTGATCA+AGG 0.559141 4.2:-67498790 MS.gene85059:CDS
TTAGGGAAGCGGGAAAGTGA+GGG 0.562285 4.2:+67503279 None:intergenic
CCCATTATATCATCATGCAC+AGG 0.563948 4.2:+67498843 None:intergenic
TCCAGGACCACAGGCACACC+AGG 0.564941 4.2:+67496099 None:intergenic
GAAAATTGGAAGGAAAATGC+GGG 0.569149 4.2:+67503301 None:intergenic
GGAAAATTGGAAGGAAAATG+CGG 0.570033 4.2:+67503300 None:intergenic
GAGTTGCCAACAAGGTGGAC+CGG 0.571836 4.2:+67497180 None:intergenic
CCATGTACAAGAAGAACAGC+AGG 0.572158 4.2:+67497381 None:intergenic
TGCTTTGCAGAAGATCGAAA+GGG 0.572339 4.2:-67496267 MS.gene85059:intron
CACCAATTGAGTTGCCAACA+AGG 0.572948 4.2:+67497172 None:intergenic
AACAGCAGGACCATCTTCAC+CGG 0.573387 4.2:+67497395 None:intergenic
GCACTTCATCATGGGGACAG+TGG 0.574452 4.2:+67495684 None:intergenic
TTGTGTATTTGCGGAACAAG+AGG 0.575726 4.2:-67502201 MS.gene85059:CDS
GTGCTTTGCAGAAGATCGAA+AGG 0.578448 4.2:-67496268 MS.gene85059:intron
AATTTGATCAAGGAGACATC+AGG 0.580703 4.2:-67498780 MS.gene85059:CDS
AAGATGCTTTCCAGGACCAC+AGG 0.585145 4.2:+67496090 None:intergenic
CTCCGAACAGACGATCACCC+TGG 0.585613 4.2:-67503183 MS.gene85059:CDS
ATACACGGTTTGGCTAGAGC+TGG 0.586316 4.2:-67497324 MS.gene85059:CDS
GAAAGTGAGGAGAGTCGTCA+TGG 0.587105 4.2:+67503323 None:intergenic
CCAAACCGTGTATGTTGTCA+CGG 0.588302 4.2:+67497334 None:intergenic
GACGGCGAGGTGGAGAGAAG+CGG 0.590300 4.2:+67503253 None:intergenic
TTATGATCCTGGTGTGCCTG+TGG 0.590576 4.2:-67496106 MS.gene85059:CDS
CTTTATTGTTGATGTTGTGG+GGG 0.593635 4.2:-67497205 MS.gene85059:CDS
ACTCAAGGTCAGTATGGAGA+TGG 0.596820 4.2:-67494836 MS.gene85059:CDS
AGTTGAGGCTGTGTGTTCGA+AGG 0.597781 4.2:-67497932 MS.gene85059:CDS
AGCACTGTTTATCAAGACAA+TGG 0.601181 4.2:+67496945 None:intergenic
CCTTGATCGATTTCAAACGA+TGG 0.609979 4.2:+67502141 None:intergenic
CTCTTTAAGCATAGCCACTG+TGG 0.610327 4.2:+67495848 None:intergenic
GCTGAAGTGGTGTAGTCACA+TGG 0.611717 4.2:+67499041 None:intergenic
AGGTTCCACAAGGCACTCCA+AGG 0.614435 4.2:-67502121 MS.gene85059:CDS
AAGCTGCAGTGAGGAGTCCA+GGG 0.615731 4.2:+67503166 None:intergenic
GAAAGTGAGGGAAAATTGGA+AGG 0.616704 4.2:+67503291 None:intergenic
CAAGTACCTGAGTAGCAAGC+TGG 0.617702 4.2:+67502896 None:intergenic
CATTACCGTGACAACATACA+CGG 0.621080 4.2:-67497339 MS.gene85059:CDS
GCATATTTGAGGTATTTGGA+GGG 0.621876 4.2:-67498594 MS.gene85059:CDS
ACTTTATTGTTGATGTTGTG+GGG 0.627427 4.2:-67497206 MS.gene85059:CDS
ATAATTCCCAAAGACAGCGC+AGG 0.628587 4.2:+67498057 None:intergenic
GTTGAACAGAGACGGCGAGG+TGG 0.629365 4.2:+67503243 None:intergenic
GTGGCAGCTGAATATCCAAA+GGG 0.629662 4.2:+67497967 None:intergenic
TGAGGCTGTGTGTTCGAAGG+AGG 0.632016 4.2:-67497929 MS.gene85059:intron
GTCCAAGGGAAGTAGACTCA+AGG 0.632417 4.2:-67494851 MS.gene85059:CDS
GGTGGCAGCTGAATATCCAA+AGG 0.632948 4.2:+67497966 None:intergenic
GCTGAAATCTAGTGAGAACA+GGG 0.634491 4.2:-67498733 MS.gene85059:CDS
GATACTTACTCGAAATAATG+CGG 0.637406 4.2:+67503103 None:intergenic
AAATCGATCAAGGTTCCACA+AGG 0.638278 4.2:-67502131 MS.gene85059:CDS
ATGAGAAAGAACGAAATGCA+GGG 0.638724 4.2:-67497999 MS.gene85059:CDS
GGTAATGTTGAAAGCTGAAG+TGG 0.646946 4.2:+67499028 None:intergenic
GCACTCCAAGGATTGAAATG+TGG 0.649300 4.2:-67502109 MS.gene85059:CDS
GCAGAAATGGAACTAGATTG+GGG 0.652249 4.2:-67499001 MS.gene85059:intron
CAGTTGCGGTTGAACAGAGA+CGG 0.653928 4.2:+67503235 None:intergenic
GATTCTGGCACTTCATCATG+GGG 0.656651 4.2:+67495677 None:intergenic
ATGATGACTTTGAGAAACAA+CGG 0.656954 4.2:-67499066 MS.gene85059:CDS
ATGATGGAAAACAGTCAACA+CGG 0.661126 4.2:-67497712 MS.gene85059:CDS
TTCTGACTCCAATGCCACAG+TGG 0.674350 4.2:-67495862 MS.gene85059:CDS
TGATGGAAAACAGTCAACAC+GGG 0.674513 4.2:-67497711 MS.gene85059:CDS
CCCTTTGTATCCAATCACAA+AGG 0.677588 4.2:+67495642 None:intergenic
GCGGTTGAACAGAGACGGCG+AGG 0.678361 4.2:+67503240 None:intergenic
ATGCTTAAAGAGCATTGTGA+TGG 0.681695 4.2:-67495837 MS.gene85059:CDS
ATCGTGTTTGAACCATACAA+TGG 0.682012 4.2:+67503206 None:intergenic
CAATTGAGTTGCCAACAAGG+TGG 0.702074 4.2:+67497175 None:intergenic
GAAAATTGGAAGCTGCAGTG+AGG 0.709487 4.2:+67503157 None:intergenic
GTGTTTGAACCATACAATGG+CGG 0.734624 4.2:+67503209 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 67494831 67503343 67494831 ID=MS.gene85059
chr4.2 mRNA 67494831 67503343 67494831 ID=MS.gene85059.t1;Parent=MS.gene85059
chr4.2 exon 67503112 67503343 67503112 ID=MS.gene85059.t1.exon1;Parent=MS.gene85059.t1
chr4.2 CDS 67503112 67503343 67503112 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67502903 67503036 67502903 ID=MS.gene85059.t1.exon2;Parent=MS.gene85059.t1
chr4.2 CDS 67502903 67503036 67502903 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67502085 67502234 67502085 ID=MS.gene85059.t1.exon3;Parent=MS.gene85059.t1
chr4.2 CDS 67502085 67502234 67502085 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67499002 67499113 67499002 ID=MS.gene85059.t1.exon4;Parent=MS.gene85059.t1
chr4.2 CDS 67499002 67499113 67499002 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67498570 67498873 67498570 ID=MS.gene85059.t1.exon5;Parent=MS.gene85059.t1
chr4.2 CDS 67498570 67498873 67498570 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67497930 67498143 67497930 ID=MS.gene85059.t1.exon6;Parent=MS.gene85059.t1
chr4.2 CDS 67497930 67498143 67497930 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67497682 67497771 67497682 ID=MS.gene85059.t1.exon7;Parent=MS.gene85059.t1
chr4.2 CDS 67497682 67497771 67497682 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67497172 67497427 67497172 ID=MS.gene85059.t1.exon8;Parent=MS.gene85059.t1
chr4.2 CDS 67497172 67497427 67497172 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67496897 67497015 67496897 ID=MS.gene85059.t1.exon9;Parent=MS.gene85059.t1
chr4.2 CDS 67496897 67497015 67496897 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67496364 67496462 67496364 ID=MS.gene85059.t1.exon10;Parent=MS.gene85059.t1
chr4.2 CDS 67496364 67496462 67496364 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67496232 67496279 67496232 ID=MS.gene85059.t1.exon11;Parent=MS.gene85059.t1
chr4.2 CDS 67496232 67496279 67496232 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67496020 67496130 67496020 ID=MS.gene85059.t1.exon12;Parent=MS.gene85059.t1
chr4.2 CDS 67496020 67496130 67496020 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67495811 67495901 67495811 ID=MS.gene85059.t1.exon13;Parent=MS.gene85059.t1
chr4.2 CDS 67495811 67495901 67495811 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67495613 67495707 67495613 ID=MS.gene85059.t1.exon14;Parent=MS.gene85059.t1
chr4.2 CDS 67495613 67495707 67495613 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
chr4.2 exon 67494831 67494893 67494831 ID=MS.gene85059.t1.exon15;Parent=MS.gene85059.t1
chr4.2 CDS 67494831 67494893 67494831 ID=cds.MS.gene85059.t1;Parent=MS.gene85059.t1
Gene Sequence

>MS.gene85059

ATGACGACTCTCCTCACTTTCCCGCATTTTCCTTCCAATTTTCCCTCACTTTCCCGCTTCCCTAAAAACCGCTTCTCTCCACCTCGCCGTCTCTGTTCAACCGCAACTGACACCGCCATTGTATGGTTCAAACACGATCTCCGAACAGACGATCACCCTGGACTCCTCACTGCAGCTTCCAATTTTCAATCCTTAGTTCCAATTTATGTATTCGATCACCGCATTATTTCGAGTAAGTATCAAACTTCATTGAATCCAAGAGTTGTTGGAAACTAACTCTATTGATGGTGTTTTGCTTGCTCTGCAGGGTTTTCTGATGAAATGCTGGAACTGGTTTTGTTCGCTGTTCGAGATTTGAGGAAGTCGTTGAAAGGTCGTGGTTCTAATCTTATGATTAAGTTTGGTAATGCTGAGAATGTGATACACCAGCTTGCTACTCAGGTACTTGGTTTTTTTGGCAATGTTTGGATAATTAGCTTAGTTAAGTGTTTATGCATAAGCTATTTCCATAACAAAATAGATTAACGGTTTTGACATAAGTTATAAGCTGTTTTTATAAGCTATTATGGAGAGCCTGTGGAAATAGATTGAAAACAGCTTATGGACGTAACATGTCATAAGTTGTTTTCATAAGTTTTCACAGATAGTCTCACAAGTGGTTAGTTCAGTAGTTAAGTTCAAATTAGTCAATTCAAACGTACCCTAAGTATTAGTTCTTTCAGCAATTTTTTGTTACTATTTATCTCTCATATTTAAAAATTCAAAGTGACGTTGGCTGTTTTTTTTGTCAATAATATCTAAAACTGTTAAATATAATCAGAGAAATATGTAAAATGGGATAAATATAATTAAGAGTGTCATAGGGAAAAGAAAAAAATTCATAAAAAAAAAAAAATACTGATTTCTTTAATATGTTTAAAAAACATGAGACCATCATTGACAAGGAAAGGCGGTAGTAGTTTCTTGATTAGTTAGAACCTAGCTTACTCAATGCATTGCAATCCATTGGCGCATGAGGATGTGAGGATATTTCATGTTTTTTCAAGCACTTGTTCCTTTTTACTTTTATCTTAAAACAAATTCAATTCATCGGTCTCAGGATGGAACAGGTCAAAGCTACTTGTGTATTTGCGGAACAAGAGGTGGAGTATGAGCTCTGCTTTATCATGGATGTTGTCAACCATCGTTTGAAATCGATCAAGGTTCCACAAGGCACTCCAAGGATTGAAATGTGGAAGACTCCCTTTTATGATGAAAATGTAGGTAGCTCGTTGGGAATTGATTGTGTTTGCTAATTCTAACATTTTTATTGGAGTGAACCACCAATTTATCTTAAATTGTAGGATTCGGTCTATTTGATCCTTAAAATTAATGAAACTCCAAAATAATTCGTTAAATAAAAAATCTTCAATCAAATTAATCATTTTGGTTGGGAGAATTTCAATTTTCAAGTTATCAACTTGAGTGATCATTTGAAATTTCATTAATTTTTAGATCAAATTGACCACAACAACAACAACAACCAAGCCTTATCCCACTAAGTGGGGTCGGCTACATGGATCAAATGCCGCCATAATGTTCTATCAAATACCATATTTGGATCCAACTCATTGACCTCTAAATCTTTTCTAATGGTTTCTCTAATGGTTTTCTTAGGTCTTCCTCTACCTCTTTTAACCTGACTCTCCTCCATTTGATCTACTCTTCTTACCACGGCGTCTATTGGTCTTCTCTCTACATGTCCAAACCATCTAAGCCTATTTTCTACCAACTTTTCTACTATAGGTGCTACCCCCACTCTCTCTCTAATGATGTCATTCCTAATCCTATCATGTCTAGTCTTACCACTCATCCAACGCAACATCCTCATCTCCGCTACGCTTACTTTACTCTCGTGTTGGCTCTTAACCGCCCAACACTCCGTACCATACAACATTGCCGGTCTGACTGCTGTCCGATAGAACTTTCCTTTCAGCTTAAGTGGTACCTTCTTATCGCACAACACACCTGAGGCTCTTCTCCATTTCAACCACCCAGCTTGAATACGATGATGTACATCAGCTTCTATTTCTCCGTCATTTTGTACTATGGACCCAAGATATCTAAACCGTGTAACTTGGGGTATGATATGATCTCCAACTTTCACCTCTAAGGTAGACCCACTTCTCCTTTTACTGAAGTTACATTCCATATACTCCGTCTTGTTTCTACTCAGGCGGAAACCATACGCTTCTAAGGCTTGCCTCCAAGTCTCTAGCCTCCCATTTAACTCCTCCCTCGACTCACCAAGCAAGACTACATCATCTGCAAAAAGCATACATCTCGGTGCTAACTCTTGGATGTGTTCCGTCAGTACATCCAAAACTAAAGTAAAAAGATAAGGACTTAGGGTTGACCCTTGGTGCAGTCCTATTGTTATGGGAAAATCTCCGGTATCCCCATCCTGCGTCCTCACACTAGTCGAAGCGCCCTCATACATATCCTGGATAGCTCTAATATAGGCAATCCTCACCCCTTTCTTCTCCAGGGCTTTCCACAAAATCTCTCTAGGTACTCTATCATACGCCTTCTCCAAATCAATGAAAACTAAGTGCAAGTCTTTTTTATCCGTCCGATATCGCTCCATCACGCGTCGAAGTAAGTAGATCGCTTCCATAGTCGACCTCCCAGGCATAAAACCAAATTGGTTATCCGTAACGTGAGTCTCTTTTCTTAGTCTTCGCTCAATTACCCTCTCCCATAACTTCATGGTATGACTCATTAGCTTAATTCCCCTATAATTCCCGCAATCTTGTATATCCCCCTTGTTCTTATAGATTGGAATTAAGGTGCTTCTTCTCCACTCGTCTGGCATTTTCTTCGTCCTCATAATCTCGTTGAAAAGTTTTGTGAGCCACCCAACTCCTCTATCGCCAAGACTTTTCCACACTTCGATAGATATGTTGTCCGGCCCAACTGCCTTGCCATTACTCATCCTTTTCAACGCTTCTTTCACCTCGTGCTCCTGAATCCGACGATAATAGTTATAGTTCCGGTCCTCCTCTCTGATGTCTAACCTGTTAGAGTCTGGTAAGATCTCATATCCTTCATTAAATAAGTTGTGGAAATACTTCTTCCATCGATCCTTAATATCTCTCTCTTGCACCAAAACTCTACCCTCTTCATCCTTAATACACTTCACTTGGTCCAGGTCTCTTGTCTTTCGTTCTCGTCCCTTCGCAAGCTTGTATATAGATTTCTCCCCCTCCTTGGTACCTAAAGATTGGTATAATCCTTCAAATGCTTGAGTTCTCGCTTCGCTTACCGCCTTCTTAGCCTCTTTCCTAGCTATCTTATATTTATCCCAAGTTTCGGCATTTTTACACTTAGACCAATCTCTAAAACAATCTCTCTTGATCCGAACTTTACTCTGAACACTGTCATTCCACCACCAAGATTCTTTACCCCTAGGTCCAAAACCTCTAGATTCTCCCAACGTCTCTTTTGCCACCTTCTTAATCTCATGAGCCATCCTCCCCCACATATCATTAGCGCTTCCATGTGGTTGCCTGAAACCTCCCTCTAATATCTTGTGTTGGAATATCCTTTGTTTGTCACCCTTTAAATGCCACCACTTGATTCGCGGAGCCCCCCTACGGTCTCTTCTCTTTGCCCTCCTCTTAACCCTTACATCCATCACCATTACTCTATGTTGGGTAGTTAAGCCCTCTCCAGGTATGACTTTACAGTCTAAACAGATCTTCCTGTCTGTTTTCCTAATGAGAAAGAAATCGATCTGAGAACAAGAGGCCCCACTCTTGTAAGTGATGAGATGCTCCTCTCTTTTCCTAAAACACGTATTTGCTATAGTAAGATCAAAAGCCGATGAAAAATCTAAGATGGAATTTCCCTCCGCATTTACCTCCCCGAGACCATACCCCCCATGCACACCCTCGAAACCTCTCGAAACCCTCCCTACATGCCCATTCAAATCCCCTCCTAGAAAAATCTTTTCTCCTAATGGAATATCCTGAATTAATCCTTCTAGCTCCTCCCAAAACTTTACTTTAAGGTGTTCTTCTAATCCTACCTGAGGTGCATAAGCGCTAATTACGTTAAAGGTGTCATGGTGACTCTCATTTTCATTTGCTTGGTTGAGTTGATTAGGTAAGAATGTCAAACTTGTGTCATGGTGGTGGTTCGTTTGAGTACTTCAGTTATGTTTGATTGATCATTATCATTATCACACAGGCTCTGCAAAATCTGGCTGCATCATATGATGACTTTGAGAAACAACGGCTCCATGTGACTACACCACTTCAGCTTTCAACATTACCTGGTGCAGAAATGGAACTAGATTGGGGTTAGTTTGTGGATGGCTTTTCTTATCAGGATTCATCTTGTATTTTTTTCTCTCTACAAGATTATTGGATATGTTGATGCACTTTACGGTGTTTCCAAAAGTCATGTGATAATTGTTCACTGAATTAGGTGATATTCCTGTGCATGATGATATAATGGGATTTATGGCTAAGAACCGACATAAATCAAGAGATGACTGGAATTTGATCAAGGAGACATCAGGTGAAACCTTGTTAGGCAGAGAAATGCTGAAATCTAGTGAGAACAGGGAGAGAAGTTATAGCTTCAGACAGATTCAGTCAAGCGAACCAAATGAATCTGTGTTTGTTACACAAAAAGGAAATGTTGTTGGAGGTGGAACATATAATGTACTAAATGCATTGGCTGCATATTTGAGGTATTTGGAGGGAACGGCTCGTGATGATTGGCAAGAGTATGTAGTGATAACCCTCTTTCTAAGAGTCTGTTACTTTTTTGGCAAATTTCAGGTGTTTGTTTTAAATAAAACTATTTTCAATTATGAGAAAGCTTCATTATATTCTTTGTTTTCTGCTTCTTGTTTGTGAACTTTTGCTTCTATTTTTCTTTATTACATTGATACATTCTGTTTCTCCGTATCATTAGAAGGGCATACATTTCTGCTTCAATAAAAAGTGTCATGCATTAGTTTTGTTTAACGAGAACGGTGATATGTTTGTATTTTACTCATCTACTCTCTGTTTTTTTTCTTATTGCTTTTTATAACACATTCAACATATGTTTCATTTGCTGAGTTTCTAAATATACATCCTATGAAGTCATTAAGTTACATAAAAAAAGTACACATAATAAAATTTTGCCTTGCCTTAAATTTGTGCAGGGTACACGAAAAACTTCGTGCTTCAGAAAGTCGAAATGGAGCATCATTTATTGCACTATTTGGTCCTGCGCTGTCTTTGGGAATTATATCTAGAAGAAGAGTACACTATGAAGCTATCAAATATGAGAAAGAACGAAATGCAGGGTTCTTATCTCCCTTTGGATATTCAGCTGCCACCATTGCAGCAGCAGTTGAGGCTGTGTGTTCGAAGGAGGTAATAACTTTAACAGCTATGCTGTGTTAAGAGTACAAATTGATATTGTCTTATTGGTTTGGTTTTGTCTTATCTGTTATACATGGGCAGTTTCCTTGATCTTTGTTTTTTGTTCTCTTTTTTATCAAAGGAGTTAATTTAATTTTTTGGTTGGCTAGTGGTACTGGCTTTTGGCTTTGAGAAATCAGATAAATAATGATGGAAAACAGTCAACACGGGTATGGAGCTGGAATGGTTTTCTTGTTCAGGTATTGAATTGATTGGCTCATAGTCAAAAACTTAATTTACTATCACGAGAAATGCTAGGGACACATTCTCTAGTTCACTCTTTTGAACACACTTCTAGTAGTTCAAATTCACATTTGTCCCAACAAATTTATGTGGGACCCAAATGTATGACCAACATGATTTAGTGGACCCATTTGAAATAAGTTAAGAACTTGAAATACTTTTTACAAGCTAAACAAAAGTGCTAATTTATTGGCTAAACTGCTTTTCTCAGTATACAATTGCCGGTGAAGATGGTCCTGCTGTTCTTCTTGTACATGGTTTTGGTGCATTTGGGGAGCATTACCGTGACAACATACACGGTTTGGCTAGAGCTGGAAATCGAGTTTGGGCTATTACATTGTTAGGGTTTGGCAAATCAGAAAAGCCAAATATTGTATATACTGAGCTCTTGTGGGCTGAACTATTGAGAGACTTTATTGTTGATGTTGTGGGGGAACCGGTCCACCTTGTTGGCAACTCAATTGGTGGTATGATTTATAAACATATATTTGGTACACCTTTCTACAAAATAAATCTCTTCTTCACAAACATGCAGTGACTTTGGATCCAGCACAATTTTCTCACCAGCTTGTTCCTGCTTCTGTTGATGTTTTTGATCATGTACATATTTTTCGCTACTCCAGGTTACATTGTTGCTATTGTTGCTCGAGTTTGGAGCGTTCTGATCAAATCCATTGTCTTGATAAACAGTGCTGGGAATGTTATCTCGAGAAATTCATCAACACCATTGTCTAAGCCAAGTGTAAGTGACAACTGACGTTCATACTACACTAGTAAGACATGGTTTTTTCTTTTCCTCTTCTTTTGCTGCCTGTCTGAAAAACAACAATTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCATTTTAAAATTTCCCCCTCCATTTTGTAAAATCTTCAATAGAAGTTGGCTTTTTAGAGTTTAAAACCTTAATATTTGCCTTAAGTGTATCATGACCGTATACTTTTTTGAATTGAAAGAACCACCCAAATGTGCATAATAATATGCTGTTAAATGAATCTTAAAGTTGGAATTATGTAAATTTCTCCTGACATTTAATTAGACAATATTTGTTGCTTAGTATGAGTACAACATAATTAGATTTTTATTTGACAAACATAATTAAATGATTTTATCTAAGATTTTCTTTTCTATTTACTTGTTAACTTTCAGGATAGACAAACGTCAGTGACTTCATGGTTGGGTTCTCGAATTCTTTTGTTTTACTTGAGGCTAAGAATTCAAGACATTGTTAAGAAATGTTATCCAACAGTAAGTGTAATTTTTGTTGCAGATTTTTTAATCTTTTTGCATTGACATCGACAGTGCTTGATTTTGTGGCATTGTGCTTTGCAGAAGATCGAAAGGGCAGATGATTGGCTCATAAATGAAATGCTAAGAGCTGTATCCTCTAGTTTACTTCTATAATCTAAATTATTTGTATTGCACCAGGCTTCACATTCTAATATATATAACTCTTTTTGACATCTCCTTTACATATCAAGTCTTATGATCCTGGTGTGCCTGTGGTCCTGGAAAGCATCTTTAGCTTTAATCTTTCCATACCTCTTAACTATCTTCTTGAAGATGTCAAGGAAAAGATTCTAATTATACAGGTATTGTAACATGGATTTGAAATGTTGTGGGAAAACCAGAAAGATAGAATTAATTGATACTGAATGATAATTCTCTGGTTTAGTTTTATATATGCTGTTTTTTATTTCATTTTGTTAGGGAATGAAAGATCCAATTTCTGACTCCAATGCCACAGTGGCTATGCTTAAAGAGCATTGTGATGGTGTTATAATTAAGGAATTAGATGCTGGTAACTAAAATTTTATATATCCGTTCTATTATTTTTTATTTTAATAATAAAGTGCCTTAGCCTTTGTTTTAAATTGATCTTTTTCTTTTGCTTAACATTACAGGCCACTGTCCCCATGATGAAGTGCCAGAATCAGTGAATACTATCCTTTGTGATTGGATACAAAGGGTTGAAAGTAACATTTTAGCAGGGTTCCAAGTATAATTTTTTTGACGTCCGGCAACTGTACATAATGATTATAACAGCAGGGTAAATTATCCAGACTCCATTAATATACTAGTCCACTGCTATGCCTTCTTTACAGTTTGTTGATAAATGGACGCTGCACTAATCCTCAATTAAACTGAAAACAGGACATGGTACCTGGGCTTGTGCATATTGTGCTATAAAATTGTAGAATTAGCCTTCCAATACTTTAAAAAATATTCTATTGGTCTGTGCCTCCAATTTTCTTCATGTTTTACATCTTCTGTTGTTTCCTCCTCAGAACCTCACTTTAACGGAAAGACAGAAACTATCATGCACTAATACATCAATGATAATTTTTCTCATATAAAATAGATTCTATGTTCGTGTCATATCTTGATAGATGCTTAAATTACAAGGAAAACTGCCTGACTTTATATCTATAAGTGTGTTTAAGACTATGCACTAGTAACGTCTATAAGTGTGACATTAAATGAGTTCAAATTTTTAAAATAATTCGTGATTTAAAATAACATAGCCTAGCCTTAAAGCAATATTATGAACCTTCAACGTCAGATAAATTATCATGCTCACCATATCTAACTAAAATGTCATTTCTAGATATCAGATTATGATGGATGAAAGACCTTGTGATCCTAAATAAACGAATTTTCGATAATTAAGCTTATATTGAGAGATATGAATGGGATTGGGTTGATGGTACATATGAGGGGTTTCGTGTTGAGACTTGGTCCAAGGGAAGTAGACTCAAGGTCAGTATGGAGATGGCTTGA

Protein sequence

>MS.gene85059.t1

MTTLLTFPHFPSNFPSLSRFPKNRFSPPRRLCSTATDTAIVWFKHDLRTDDHPGLLTAASNFQSLVPIYVFDHRIISRFSDEMLELVLFAVRDLRKSLKGRGSNLMIKFGNAENVIHQLATQVKATCVFAEQEVEYELCFIMDVVNHRLKSIKVPQGTPRIEMWKTPFYDENALQNLAASYDDFEKQRLHVTTPLQLSTLPGAEMELDWGDIPVHDDIMGFMAKNRHKSRDDWNLIKETSGETLLGREMLKSSENRERSYSFRQIQSSEPNESVFVTQKGNVVGGGTYNVLNALAAYLRYLEGTARDDWQEVHEKLRASESRNGASFIALFGPALSLGIISRRRVHYEAIKYEKERNAGFLSPFGYSAATIAAAVEAVCSKEWYWLLALRNQINNDGKQSTRVWSWNGFLVQYTIAGEDGPAVLLVHGFGAFGEHYRDNIHGLARAGNRVWAITLLGFGKSEKPNIVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYIVAIVARVWSVLIKSIVLINSAGNVISRNSSTPLSKPSDRQTSVTSWLGSRILLFYLRLRIQDIVKKCYPTKIERADDWLINEMLRASYDPGVPVVLESIFSFNLSIPLNYLLEDVKEKILIIQGMKDPISDSNATVAMLKEHCDGVIIKELDAGHCPHDEVPESVNTILCDWIQRVESNILAGFQGFRVETWSKGSRLKVSMEMA