AlfalfaGEDB | MS.gene20025

M. sativa cultivar XinJiangDaYe / MS.gene20025

KEGG: K02113
GO: GO:0003674 GO:0003824 GO:0005215 GO:0005216 GO:0005261 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009117 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009165 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009987 GO:0015075 GO:0015077 GO:0015078 GO:0015252 GO:0015267 GO:0015318 GO:0015672 GO:0015985 GO:0015986 GO:0016740 GO:0016772 GO:0016776 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0022803 GO:0022857 GO:0022890 GO:0034220 GO:0034641 GO:0034654 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046034 GO:0046390 GO:0046483 GO:0046933 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0098655 GO:0098660 GO:0098662 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600
PFAM: PF00213.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20025.t1	XP_003626577.1	82.2	202	31	1	1	202	1	197	1.20E-79	306.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20025.t1	P11402	26.6	109	74	2	90	192	78	186	1.1e-06	55.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20025.t1	G7L517	82.2	202	31	1	1	202	1	197	8.3e-80	306.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049134	MS.gene20025	-0.801743	7.80E-49	-1.69E-46
MS.gene049137	MS.gene20025	0.86243	5.10E-64	-1.69E-46
MS.gene049170	MS.gene20025	0.814221	1.72E-51	-1.69E-46
MS.gene049222	MS.gene20025	0.800887	1.17E-48	-1.69E-46
MS.gene049236	MS.gene20025	-0.801783	7.65E-49	-1.69E-46
MS.gene049351	MS.gene20025	0.835029	2.13E-56	-1.69E-46
MS.gene049356	MS.gene20025	0.853243	2.72E-61	-1.69E-46
MS.gene049369	MS.gene20025	0.822389	2.43E-53	-1.69E-46
MS.gene049396	MS.gene20025	0.815738	7.93E-52	-1.69E-46
MS.gene049427	MS.gene20025	0.830044	3.67E-55	-1.69E-46
MS.gene049488	MS.gene20025	0.827424	1.58E-54	-1.69E-46
MS.gene049609	MS.gene20025	0.862917	3.61E-64	-1.69E-46
MS.gene049661	MS.gene20025	0.815186	1.05E-51	-1.69E-46
MS.gene049662	MS.gene20025	0.811655	6.28E-51	-1.69E-46
MS.gene049805	MS.gene20025	0.863552	2.29E-64	-1.69E-46
MS.gene050122	MS.gene20025	0.823525	1.32E-53	-1.69E-46
MS.gene050301	MS.gene20025	0.851505	8.50E-61	-1.69E-46
MS.gene050315	MS.gene20025	0.801071	1.07E-48	-1.69E-46
MS.gene050397	MS.gene20025	0.829453	5.10E-55	-1.69E-46
MS.gene050400	MS.gene20025	0.83036	3.07E-55	-1.69E-46
MS.gene050426	MS.gene20025	-0.841197	5.50E-58	-1.69E-46
MS.gene050432	MS.gene20025	0.807469	4.98E-50	-1.69E-46
MS.gene050464	MS.gene20025	0.841883	3.63E-58	-1.69E-46
MS.gene050529	MS.gene20025	0.842238	2.92E-58	-1.69E-46
MS.gene050593	MS.gene20025	0.894608	2.10E-75	-1.69E-46
MS.gene050625	MS.gene20025	0.841041	6.04E-58	-1.69E-46
MS.gene050670	MS.gene20025	0.983913	4.65E-159	-1.69E-46
MS.gene050747	MS.gene20025	0.852958	3.28E-61	-1.69E-46
MS.gene050772	MS.gene20025	0.836203	1.07E-56	-1.69E-46
MS.gene050812	MS.gene20025	0.835224	1.90E-56	-1.69E-46
MS.gene050950	MS.gene20025	0.842991	1.84E-58	-1.69E-46
MS.gene050971	MS.gene20025	0.82351	1.33E-53	-1.69E-46
MS.gene05101	MS.gene20025	0.819839	9.41E-53	-1.69E-46
MS.gene05105	MS.gene20025	0.919568	3.82E-87	-1.69E-46
MS.gene051360	MS.gene20025	0.829436	5.15E-55	-1.69E-46
MS.gene051387	MS.gene20025	0.909407	5.89E-82	-1.69E-46
MS.gene051525	MS.gene20025	0.915471	5.66E-85	-1.69E-46
MS.gene051582	MS.gene20025	0.888822	4.20E-73	-1.69E-46
MS.gene051588	MS.gene20025	0.815585	8.57E-52	-1.69E-46
MS.gene051605	MS.gene20025	0.823056	1.70E-53	-1.69E-46
MS.gene051666	MS.gene20025	0.875549	2.82E-68	-1.69E-46
MS.gene051692	MS.gene20025	0.802842	4.63E-49	-1.69E-46
MS.gene051838	MS.gene20025	0.828382	9.27E-55	-1.69E-46
MS.gene051858	MS.gene20025	0.808609	2.85E-50	-1.69E-46
MS.gene051860	MS.gene20025	0.807095	5.97E-50	-1.69E-46
MS.gene051877	MS.gene20025	0.824291	8.74E-54	-1.69E-46
MS.gene052011	MS.gene20025	-0.87697	9.14E-69	-1.69E-46
MS.gene052077	MS.gene20025	0.831303	1.80E-55	-1.69E-46
MS.gene052078	MS.gene20025	0.80735	5.28E-50	-1.69E-46
MS.gene052128	MS.gene20025	-0.820227	7.67E-53	-1.69E-46
MS.gene052134	MS.gene20025	0.809093	2.24E-50	-1.69E-46
MS.gene052135	MS.gene20025	0.817134	3.86E-52	-1.69E-46
MS.gene052136	MS.gene20025	0.807536	4.82E-50	-1.69E-46
MS.gene052188	MS.gene20025	0.892463	1.55E-74	-1.69E-46
MS.gene052253	MS.gene20025	0.885344	8.82E-72	-1.69E-46
MS.gene052310	MS.gene20025	0.879968	8.08E-70	-1.69E-46
MS.gene052322	MS.gene20025	0.841285	5.21E-58	-1.69E-46
MS.gene052340	MS.gene20025	0.859683	3.49E-63	-1.69E-46
MS.gene052346	MS.gene20025	0.852015	6.09E-61	-1.69E-46
MS.gene05240	MS.gene20025	-0.80197	7.00E-49	-1.69E-46
MS.gene052414	MS.gene20025	0.869441	3.09E-66	-1.69E-46
MS.gene052421	MS.gene20025	0.901989	1.53E-78	-1.69E-46
MS.gene052481	MS.gene20025	0.866479	2.77E-65	-1.69E-46
MS.gene052484	MS.gene20025	0.833733	4.50E-56	-1.69E-46
MS.gene052485	MS.gene20025	0.881938	1.58E-70	-1.69E-46
MS.gene052501	MS.gene20025	0.874631	5.81E-68	-1.69E-46
MS.gene052503	MS.gene20025	0.813752	2.18E-51	-1.69E-46
MS.gene052505	MS.gene20025	0.875498	2.94E-68	-1.69E-46
MS.gene052615	MS.gene20025	0.82185	3.24E-53	-1.69E-46
MS.gene052767	MS.gene20025	0.803787	2.95E-49	-1.69E-46
MS.gene052823	MS.gene20025	0.802918	4.47E-49	-1.69E-46
MS.gene052825	MS.gene20025	0.803137	4.02E-49	-1.69E-46
MS.gene052982	MS.gene20025	0.872083	4.18E-67	-1.69E-46
MS.gene052999	MS.gene20025	0.818881	1.56E-52	-1.69E-46
MS.gene053103	MS.gene20025	0.831608	1.52E-55	-1.69E-46
MS.gene053104	MS.gene20025	0.81906	1.42E-52	-1.69E-46
MS.gene053107	MS.gene20025	0.808624	2.83E-50	-1.69E-46
MS.gene053169	MS.gene20025	0.859809	3.20E-63	-1.69E-46
MS.gene053207	MS.gene20025	0.829959	3.84E-55	-1.69E-46
MS.gene053209	MS.gene20025	0.833353	5.60E-56	-1.69E-46
MS.gene053213	MS.gene20025	0.810014	1.42E-50	-1.69E-46
MS.gene053322	MS.gene20025	0.819108	1.38E-52	-1.69E-46
MS.gene05335	MS.gene20025	0.807271	5.49E-50	-1.69E-46
MS.gene053436	MS.gene20025	0.808173	3.53E-50	-1.69E-46
MS.gene053449	MS.gene20025	0.834903	2.29E-56	-1.69E-46
MS.gene053574	MS.gene20025	0.847722	9.66E-60	-1.69E-46
MS.gene053579	MS.gene20025	0.810208	1.29E-50	-1.69E-46
MS.gene053626	MS.gene20025	0.801761	7.73E-49	-1.69E-46
MS.gene053632	MS.gene20025	0.800364	1.49E-48	-1.69E-46
MS.gene053758	MS.gene20025	0.838832	2.28E-57	-1.69E-46
MS.gene053813	MS.gene20025	0.825167	5.43E-54	-1.69E-46
MS.gene053824	MS.gene20025	0.80994	1.48E-50	-1.69E-46
MS.gene053836	MS.gene20025	0.827548	1.47E-54	-1.69E-46
MS.gene053873	MS.gene20025	0.84469	6.47E-59	-1.69E-46
MS.gene053912	MS.gene20025	0.838805	2.31E-57	-1.69E-46
MS.gene053928	MS.gene20025	0.811026	8.60E-51	-1.69E-46
MS.gene054011	MS.gene20025	0.801256	9.81E-49	-1.69E-46
MS.gene054123	MS.gene20025	0.839614	1.43E-57	-1.69E-46
MS.gene054183	MS.gene20025	0.846983	1.54E-59	-1.69E-46
MS.gene054349	MS.gene20025	0.833661	4.69E-56	-1.69E-46
MS.gene054556	MS.gene20025	0.86238	5.28E-64	-1.69E-46
MS.gene054719	MS.gene20025	0.843924	1.04E-58	-1.69E-46
MS.gene054742	MS.gene20025	-0.816987	4.16E-52	-1.69E-46
MS.gene054884	MS.gene20025	-0.802696	4.96E-49	-1.69E-46
MS.gene054917	MS.gene20025	0.818264	2.15E-52	-1.69E-46
MS.gene054918	MS.gene20025	0.806869	6.67E-50	-1.69E-46
MS.gene054920	MS.gene20025	0.819953	8.86E-53	-1.69E-46
MS.gene054927	MS.gene20025	0.857561	1.50E-62	-1.69E-46
MS.gene054955	MS.gene20025	0.82875	7.56E-55	-1.69E-46
MS.gene05505	MS.gene20025	0.873978	9.67E-68	-1.69E-46
MS.gene055116	MS.gene20025	0.913008	1.01E-83	-1.69E-46
MS.gene055206	MS.gene20025	0.822197	2.69E-53	-1.69E-46
MS.gene055224	MS.gene20025	0.816979	4.18E-52	-1.69E-46
MS.gene055277	MS.gene20025	0.815163	1.06E-51	-1.69E-46
MS.gene055289	MS.gene20025	0.815651	8.29E-52	-1.69E-46
MS.gene055369	MS.gene20025	0.88417	2.41E-71	-1.69E-46
MS.gene055412	MS.gene20025	0.822404	2.41E-53	-1.69E-46
MS.gene055422	MS.gene20025	0.813503	2.48E-51	-1.69E-46
MS.gene055428	MS.gene20025	0.800634	1.31E-48	-1.69E-46
MS.gene055486	MS.gene20025	0.801695	7.98E-49	-1.69E-46
MS.gene055539	MS.gene20025	0.863908	1.78E-64	-1.69E-46
MS.gene05553	MS.gene20025	0.864655	1.04E-64	-1.69E-46
MS.gene055564	MS.gene20025	0.822839	1.91E-53	-1.69E-46
MS.gene055604	MS.gene20025	0.804292	2.32E-49	-1.69E-46
MS.gene055647	MS.gene20025	0.802483	5.49E-49	-1.69E-46
MS.gene055722	MS.gene20025	0.819477	1.14E-52	-1.69E-46
MS.gene055741	MS.gene20025	0.865835	4.43E-65	-1.69E-46
MS.gene055744	MS.gene20025	0.870857	1.06E-66	-1.69E-46
MS.gene055859	MS.gene20025	0.800228	1.59E-48	-1.69E-46
MS.gene055909	MS.gene20025	0.861	1.39E-63	-1.69E-46
MS.gene055911	MS.gene20025	0.869697	2.55E-66	-1.69E-46
MS.gene05592	MS.gene20025	0.834091	3.66E-56	-1.69E-46
MS.gene055941	MS.gene20025	0.832608	8.58E-56	-1.69E-46
MS.gene05594	MS.gene20025	0.846708	1.83E-59	-1.69E-46
MS.gene05602	MS.gene20025	0.832782	7.77E-56	-1.69E-46
MS.gene056040	MS.gene20025	0.800661	1.30E-48	-1.69E-46
MS.gene056166	MS.gene20025	0.82382	1.13E-53	-1.69E-46
MS.gene056191	MS.gene20025	0.847089	1.44E-59	-1.69E-46
MS.gene056337	MS.gene20025	0.832907	7.23E-56	-1.69E-46
MS.gene056407	MS.gene20025	0.906536	1.34E-80	-1.69E-46
MS.gene056410	MS.gene20025	0.825598	4.30E-54	-1.69E-46
MS.gene056422	MS.gene20025	0.818058	2.39E-52	-1.69E-46
MS.gene056511	MS.gene20025	0.900473	7.07E-78	-1.69E-46
MS.gene056514	MS.gene20025	0.870311	1.61E-66	-1.69E-46
MS.gene05664	MS.gene20025	0.828748	7.57E-55	-1.69E-46
MS.gene056659	MS.gene20025	0.845704	3.44E-59	-1.69E-46
MS.gene05666	MS.gene20025	0.83602	1.19E-56	-1.69E-46
MS.gene056723	MS.gene20025	0.843835	1.10E-58	-1.69E-46
MS.gene056782	MS.gene20025	0.806677	7.32E-50	-1.69E-46
MS.gene056796	MS.gene20025	0.821988	3.01E-53	-1.69E-46
MS.gene056877	MS.gene20025	0.836813	7.51E-57	-1.69E-46
MS.gene056899	MS.gene20025	-0.816181	6.31E-52	-1.69E-46
MS.gene056902	MS.gene20025	0.805184	1.51E-49	-1.69E-46
MS.gene057011	MS.gene20025	0.827006	1.99E-54	-1.69E-46
MS.gene057019	MS.gene20025	0.823596	1.27E-53	-1.69E-46
MS.gene05702	MS.gene20025	0.830562	2.74E-55	-1.69E-46
MS.gene057048	MS.gene20025	0.806582	7.67E-50	-1.69E-46
MS.gene057076	MS.gene20025	0.840166	1.02E-57	-1.69E-46
MS.gene057123	MS.gene20025	0.821934	3.10E-53	-1.69E-46
MS.gene057124	MS.gene20025	0.879253	1.45E-69	-1.69E-46
MS.gene057146	MS.gene20025	0.858227	9.52E-63	-1.69E-46
MS.gene057289	MS.gene20025	0.805863	1.09E-49	-1.69E-46
MS.gene057331	MS.gene20025	0.828848	7.16E-55	-1.69E-46
MS.gene057396	MS.gene20025	0.834742	2.51E-56	-1.69E-46
MS.gene057416	MS.gene20025	0.864092	1.56E-64	-1.69E-46
MS.gene057448	MS.gene20025	0.830271	3.23E-55	-1.69E-46
MS.gene057449	MS.gene20025	0.812435	4.25E-51	-1.69E-46
MS.gene057450	MS.gene20025	0.827192	1.79E-54	-1.69E-46
MS.gene057476	MS.gene20025	0.861752	8.22E-64	-1.69E-46
MS.gene057658	MS.gene20025	0.81082	9.53E-51	-1.69E-46
MS.gene057734	MS.gene20025	0.862658	4.33E-64	-1.69E-46
MS.gene057749	MS.gene20025	0.883128	5.83E-71	-1.69E-46
MS.gene057823	MS.gene20025	0.887084	1.95E-72	-1.69E-46
MS.gene057825	MS.gene20025	0.824957	6.09E-54	-1.69E-46
MS.gene057856	MS.gene20025	0.838331	3.06E-57	-1.69E-46
MS.gene057888	MS.gene20025	0.836038	1.18E-56	-1.69E-46
MS.gene058002	MS.gene20025	0.833443	5.32E-56	-1.69E-46
MS.gene058006	MS.gene20025	0.81261	3.89E-51	-1.69E-46
MS.gene058007	MS.gene20025	0.883874	3.10E-71	-1.69E-46
MS.gene058019	MS.gene20025	0.868034	8.81E-66	-1.69E-46
MS.gene058082	MS.gene20025	0.80849	3.02E-50	-1.69E-46
MS.gene05811	MS.gene20025	0.826275	2.97E-54	-1.69E-46
MS.gene058120	MS.gene20025	0.816824	4.53E-52	-1.69E-46
MS.gene058130	MS.gene20025	0.808376	3.19E-50	-1.69E-46
MS.gene058142	MS.gene20025	0.803338	3.66E-49	-1.69E-46
MS.gene058233	MS.gene20025	0.835159	1.97E-56	-1.69E-46
MS.gene058293	MS.gene20025	0.850016	2.23E-60	-1.69E-46
MS.gene058323	MS.gene20025	0.801943	7.09E-49	-1.69E-46
MS.gene058365	MS.gene20025	0.834024	3.81E-56	-1.69E-46
MS.gene058376	MS.gene20025	0.868064	8.62E-66	-1.69E-46
MS.gene05837	MS.gene20025	0.806003	1.02E-49	-1.69E-46
MS.gene058444	MS.gene20025	0.877342	6.79E-69	-1.69E-46
MS.gene058660	MS.gene20025	0.871639	5.86E-67	-1.69E-46
MS.gene058700	MS.gene20025	0.915162	8.16E-85	-1.69E-46
MS.gene058710	MS.gene20025	0.806413	8.33E-50	-1.69E-46
MS.gene058838	MS.gene20025	0.803811	2.92E-49	-1.69E-46
MS.gene05883	MS.gene20025	0.813698	2.24E-51	-1.69E-46
MS.gene05886	MS.gene20025	0.860911	1.48E-63	-1.69E-46
MS.gene058928	MS.gene20025	0.840604	7.87E-58	-1.69E-46
MS.gene058948	MS.gene20025	0.84772	9.67E-60	-1.69E-46
MS.gene058949	MS.gene20025	0.807466	4.99E-50	-1.69E-46
MS.gene058993	MS.gene20025	0.809036	2.31E-50	-1.69E-46
MS.gene058995	MS.gene20025	0.827054	1.93E-54	-1.69E-46
MS.gene059011	MS.gene20025	0.84023	9.85E-58	-1.69E-46
MS.gene05907	MS.gene20025	0.878061	3.81E-69	-1.69E-46
MS.gene059080	MS.gene20025	0.805686	1.18E-49	-1.69E-46
MS.gene059082	MS.gene20025	0.841629	4.23E-58	-1.69E-46
MS.gene059141	MS.gene20025	0.855102	7.90E-62	-1.69E-46
MS.gene059285	MS.gene20025	0.811547	6.63E-51	-1.69E-46
MS.gene059294	MS.gene20025	0.807966	3.90E-50	-1.69E-46
MS.gene05934	MS.gene20025	0.846917	1.61E-59	-1.69E-46
MS.gene059366	MS.gene20025	0.842234	2.93E-58	-1.69E-46
MS.gene059368	MS.gene20025	0.815177	1.06E-51	-1.69E-46
MS.gene059420	MS.gene20025	0.896054	5.33E-76	-1.69E-46
MS.gene059455	MS.gene20025	0.830001	3.76E-55	-1.69E-46
MS.gene059462	MS.gene20025	0.841174	5.58E-58	-1.69E-46
MS.gene059499	MS.gene20025	0.816755	4.70E-52	-1.69E-46
MS.gene059502	MS.gene20025	0.801787	7.63E-49	-1.69E-46
MS.gene059504	MS.gene20025	0.804185	2.44E-49	-1.69E-46
MS.gene059536	MS.gene20025	0.846895	1.63E-59	-1.69E-46
MS.gene059597	MS.gene20025	0.830472	2.88E-55	-1.69E-46
MS.gene05959	MS.gene20025	0.809352	1.97E-50	-1.69E-46
MS.gene059674	MS.gene20025	0.805649	1.21E-49	-1.69E-46
MS.gene059676	MS.gene20025	0.869168	3.79E-66	-1.69E-46
MS.gene059688	MS.gene20025	0.91469	1.43E-84	-1.69E-46
MS.gene059692	MS.gene20025	0.894954	1.52E-75	-1.69E-46
MS.gene059695	MS.gene20025	0.902193	1.25E-78	-1.69E-46
MS.gene059711	MS.gene20025	0.823163	1.61E-53	-1.69E-46
MS.gene059807	MS.gene20025	0.844329	8.09E-59	-1.69E-46
MS.gene05984	MS.gene20025	0.833409	5.42E-56	-1.69E-46
MS.gene059876	MS.gene20025	0.821074	4.90E-53	-1.69E-46
MS.gene059902	MS.gene20025	0.805771	1.14E-49	-1.69E-46
MS.gene059933	MS.gene20025	0.822512	2.28E-53	-1.69E-46
MS.gene059960	MS.gene20025	0.80947	1.86E-50	-1.69E-46
MS.gene060247	MS.gene20025	0.809951	1.47E-50	-1.69E-46
MS.gene060372	MS.gene20025	0.838866	2.23E-57	-1.69E-46
MS.gene060403	MS.gene20025	0.905568	3.74E-80	-1.69E-46
MS.gene060804	MS.gene20025	0.86428	1.36E-64	-1.69E-46
MS.gene060835	MS.gene20025	0.865704	4.87E-65	-1.69E-46
MS.gene060837	MS.gene20025	0.882355	1.12E-70	-1.69E-46
MS.gene06092	MS.gene20025	0.850589	1.54E-60	-1.69E-46
MS.gene060986	MS.gene20025	0.801752	7.76E-49	-1.69E-46
MS.gene061041	MS.gene20025	0.829562	4.80E-55	-1.69E-46
MS.gene061049	MS.gene20025	0.84665	1.90E-59	-1.69E-46
MS.gene061051	MS.gene20025	-0.844223	8.64E-59	-1.69E-46
MS.gene061154	MS.gene20025	0.906902	9.02E-81	-1.69E-46
MS.gene061159	MS.gene20025	0.814986	1.17E-51	-1.69E-46
MS.gene061200	MS.gene20025	0.821706	3.50E-53	-1.69E-46
MS.gene061214	MS.gene20025	0.800198	1.61E-48	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20025.t1	MTR_7g117900	88.119	202	19	1	1	202	1	197	4.49e-126	355

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20025.t1	AT4G00895	40.945	127	61	3	65	187	75	191	2.37e-19	82.4

Find 54 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGGAAGAGAAATGAGATTT+TGG	0.211304	7.4:-1065760	None:intergenic
GGTTTCATCAAAAGAGAAAT+TGG	0.262334	7.4:+1066197	MS.gene20025:CDS
ACTGAGTTTCTGCACACTTT+TGG	0.309140	7.4:-1066243	None:intergenic
ATGTGGAACTCAAGTTGTTT+TGG	0.349249	7.4:+1066176	MS.gene20025:CDS
ATGGTTTGTGTTTGAGAGGT+TGG	0.358792	7.4:-1065849	None:intergenic
ATTGGTGAAGATGAAATGTT+TGG	0.381129	7.4:+1066215	MS.gene20025:CDS
TGGTTTGTGTTTGAGAGGTT+GGG	0.403119	7.4:-1065848	None:intergenic
TTTGAGAGGTTGGGTCTTTG+AGG	0.403625	7.4:-1065839	None:intergenic
GCAGCAGCATAGCCAGTAGC+AGG	0.415721	7.4:-1065898	None:intergenic
TGAAGGGCATGTGGTTGGTT+TGG	0.422427	7.4:+1066074	MS.gene20025:CDS
TGTTGGTGTTGACCCTTCAT+TGG	0.430284	7.4:+1066023	MS.gene20025:CDS
TTGAGAGGTTGGGTCTTTGA+GGG	0.430753	7.4:-1065838	None:intergenic
ACCACCTTCCTCACCAATGA+AGG	0.445507	7.4:-1066036	None:intergenic
TTGTGAAGTGATAGAATTCA+CGG	0.447151	7.4:-1065696	None:intergenic
CACCCTTCCCTCGGTTCAAA+GGG	0.453751	7.4:+1065948	MS.gene20025:CDS
TTCCATCACAAGCCTGCTAC+TGG	0.468777	7.4:+1065886	MS.gene20025:CDS
TTGGTTGTTGAGGATGAGAA+GGG	0.471694	7.4:-1065741	None:intergenic
TTTGGTTGTTGAGGATGAGA+AGG	0.473648	7.4:-1065742	None:intergenic
ACACCCTTCCCTCGGTTCAA+AGG	0.483662	7.4:+1065947	MS.gene20025:CDS
TAGAATTCACGGTTGGTTGT+TGG	0.484183	7.4:-1065685	None:intergenic
TTGGTGAAGATGAAATGTTT+GGG	0.494512	7.4:+1066216	MS.gene20025:CDS
TTGAACCGAGGGAAGGGTGT+TGG	0.514330	7.4:-1065944	None:intergenic
TGGGTCTTTGAGGGTAGTGA+AGG	0.516568	7.4:-1065829	None:intergenic
AATTCACGGTTGGTTGTTGG+TGG	0.518266	7.4:-1065682	None:intergenic
AGCCAGTAGCAGGCTTGTGA+TGG	0.522904	7.4:-1065888	None:intergenic
AGGATTTATGATGAATTATG+TGG	0.523605	7.4:+1066159	MS.gene20025:CDS
GAAGATGGTTTGTGTTTGAG+AGG	0.530277	7.4:-1065853	None:intergenic
TGGAATACTTGAGAAGAAGA+TGG	0.533703	7.4:-1065868	None:intergenic
AAATTTGAAGGGCATGTGGT+TGG	0.536206	7.4:+1066069	MS.gene20025:CDS
AAGTGTTGGAAGAGTTCATG+AGG	0.536714	7.4:+1066139	MS.gene20025:CDS
TGACCCTTCATTGGTGAGGA+AGG	0.538931	7.4:+1066032	MS.gene20025:CDS
GTGGAGCAGAGAAAATTTGA+AGG	0.540648	7.4:+1066057	MS.gene20025:CDS
GGGAATTGTTGAGGAAGTGT+TGG	0.544791	7.4:+1066125	MS.gene20025:CDS
ATCCCTTTGAACCGAGGGAA+GGG	0.545984	7.4:-1065950	None:intergenic
GCTGATGAAGAAGAACAAGC+TGG	0.546081	7.4:+1066104	MS.gene20025:CDS
AAATTTCAATCAGTTGATGT+TGG	0.559351	7.4:+1066006	MS.gene20025:CDS
GAAACTCAGTGGTGCAGTGA+GGG	0.562635	7.4:+1066256	MS.gene20025:CDS
AGAGCTTGAGAAAGCATCCA+TGG	0.563193	7.4:-1065641	None:intergenic
ATTCACGGTTGGTTGTTGGT+GGG	0.565174	7.4:-1065681	None:intergenic
TTCATTGGTGAGGAAGGTGG+TGG	0.567833	7.4:+1066038	MS.gene20025:CDS
CATCCCTTTGAACCGAGGGA+AGG	0.585509	7.4:-1065951	None:intergenic
CCCTTCATTGGTGAGGAAGG+TGG	0.586166	7.4:+1066035	MS.gene20025:CDS
CTGATGAAGAAGAACAAGCT+GGG	0.589597	7.4:+1066105	MS.gene20025:CDS
GAGAAAATTTGAAGGGCATG+TGG	0.597790	7.4:+1066065	MS.gene20025:CDS
TGAACATCCCTTTGAACCGA+GGG	0.602693	7.4:-1065955	None:intergenic
GTGTTGACCCTTCATTGGTG+AGG	0.604863	7.4:+1066028	MS.gene20025:CDS
TTGAACATCCCTTTGAACCG+AGG	0.616637	7.4:-1065956	None:intergenic
GAAGGGTTTGCAGTTGCATG+AGG	0.616977	7.4:-1065724	None:intergenic
GAACAAGCTGGGAATTGTTG+AGG	0.625515	7.4:+1066116	MS.gene20025:CDS
CCACCTTCCTCACCAATGAA+GGG	0.627070	7.4:-1066035	None:intergenic
GAAGTGATAGAATTCACGGT+TGG	0.666630	7.4:-1065692	None:intergenic
TGGAGCAGAGAAAATTTGAA+GGG	0.672649	7.4:+1066058	MS.gene20025:CDS
AGAAACTCAGTGGTGCAGTG+AGG	0.695602	7.4:+1066255	MS.gene20025:CDS
AAAAGTGTGCAGAAACTCAG+TGG	0.740335	7.4:+1066245	MS.gene20025:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGAGAAAGTTTTTGTTTTTT+GGG	-	chr7.4:1065794-1065813	None:intergenic	20.0%
!	AGGATTTATGATGAATTATG+TGG	+	chr7.4:1066159-1066178	MS.gene20025:CDS	25.0%
!!	AAATTTCAATCAGTTGATGT+TGG	+	chr7.4:1066006-1066025	MS.gene20025:CDS	25.0%
!!	CTGATTGAAATTTCAGTTTT+TGG	-	chr7.4:1065999-1066018	None:intergenic	25.0%
!!!	ATTGAAATTTCAGTTTTTGG+AGG	-	chr7.4:1065996-1066015	None:intergenic	25.0%
!!!	GTGAGAAAGTTTTTGTTTTT+TGG	-	chr7.4:1065795-1065814	None:intergenic	25.0%
	ATTGGTGAAGATGAAATGTT+TGG	+	chr7.4:1066215-1066234	MS.gene20025:CDS	30.0%
	GGTTTCATCAAAAGAGAAAT+TGG	+	chr7.4:1066197-1066216	MS.gene20025:CDS	30.0%
	TTGGTGAAGATGAAATGTTT+GGG	+	chr7.4:1066216-1066235	MS.gene20025:CDS	30.0%
	TTGTGAAGTGATAGAATTCA+CGG	-	chr7.4:1065699-1065718	None:intergenic	30.0%
!	TTGGAAGAGAAATGAGATTT+TGG	-	chr7.4:1065763-1065782	None:intergenic	30.0%
!!!	AAATGAGATTTTGGTTGTTG+AGG	-	chr7.4:1065754-1065773	None:intergenic	30.0%
	TGGAATACTTGAGAAGAAGA+TGG	-	chr7.4:1065871-1065890	None:intergenic	35.0%
	TGGAGCAGAGAAAATTTGAA+GGG	+	chr7.4:1066058-1066077	MS.gene20025:CDS	35.0%
!!	ATGTGGAACTCAAGTTGTTT+TGG	+	chr7.4:1066176-1066195	MS.gene20025:CDS	35.0%
!!!	TGTTTTTTGGGTGACTAAGT+TGG	-	chr7.4:1065782-1065801	None:intergenic	35.0%
	CTGATGAAGAAGAACAAGCT+GGG	+	chr7.4:1066105-1066124	MS.gene20025:CDS	40.0%
	GAAGTGATAGAATTCACGGT+TGG	-	chr7.4:1065695-1065714	None:intergenic	40.0%
	GTGGAGCAGAGAAAATTTGA+AGG	+	chr7.4:1066057-1066076	MS.gene20025:CDS	40.0%
	TTGGTTGTTGAGGATGAGAA+GGG	-	chr7.4:1065744-1065763	None:intergenic	40.0%
	TTTGGTTGTTGAGGATGAGA+AGG	-	chr7.4:1065745-1065764	None:intergenic	40.0%
!	AAAAGTGTGCAGAAACTCAG+TGG	+	chr7.4:1066245-1066264	MS.gene20025:CDS	40.0%
!	AAATTTGAAGGGCATGTGGT+TGG	+	chr7.4:1066069-1066088	MS.gene20025:CDS	40.0%
!	ACTGAGTTTCTGCACACTTT+TGG	-	chr7.4:1066246-1066265	None:intergenic	40.0%
!	ATGGTTTGTGTTTGAGAGGT+TGG	-	chr7.4:1065852-1065871	None:intergenic	40.0%
!	GAAGATGGTTTGTGTTTGAG+AGG	-	chr7.4:1065856-1065875	None:intergenic	40.0%
!	GAGAAAATTTGAAGGGCATG+TGG	+	chr7.4:1066065-1066084	MS.gene20025:CDS	40.0%
!	TAGAATTCACGGTTGGTTGT+TGG	-	chr7.4:1065688-1065707	None:intergenic	40.0%
!	TGGTTTGTGTTTGAGAGGTT+GGG	-	chr7.4:1065851-1065870	None:intergenic	40.0%
!!	AAGTGTTGGAAGAGTTCATG+AGG	+	chr7.4:1066139-1066158	MS.gene20025:CDS	40.0%
	AAAAACCAACACCCTTCCCT+CGG	+	chr7.4:1065939-1065958	MS.gene20025:CDS	45.0%
	GAACAAGCTGGGAATTGTTG+AGG	+	chr7.4:1066116-1066135	MS.gene20025:CDS	45.0%
	GCTGATGAAGAAGAACAAGC+TGG	+	chr7.4:1066104-1066123	MS.gene20025:CDS	45.0%
	TGAACATCCCTTTGAACCGA+GGG	-	chr7.4:1065958-1065977	None:intergenic	45.0%
	TTGAACATCCCTTTGAACCG+AGG	-	chr7.4:1065959-1065978	None:intergenic	45.0%
	TTGAGAGGTTGGGTCTTTGA+GGG	-	chr7.4:1065841-1065860	None:intergenic	45.0%
	TTTGAGAGGTTGGGTCTTTG+AGG	-	chr7.4:1065842-1065861	None:intergenic	45.0%
!	AATTCACGGTTGGTTGTTGG+TGG	-	chr7.4:1065685-1065704	None:intergenic	45.0%
!	ATTCACGGTTGGTTGTTGGT+GGG	-	chr7.4:1065684-1065703	None:intergenic	45.0%
!	GGGAATTGTTGAGGAAGTGT+TGG	+	chr7.4:1066125-1066144	MS.gene20025:CDS	45.0%
!!	GGTTGTTGGTGGGATTTTGA+GGG	-	chr7.4:1065674-1065693	None:intergenic	45.0%
!!	TGGTTGTTGGTGGGATTTTG+AGG	-	chr7.4:1065675-1065694	None:intergenic	45.0%
!!	TGTTGGTGTTGACCCTTCAT+TGG	+	chr7.4:1066023-1066042	MS.gene20025:CDS	45.0%
	ACCACCTTCCTCACCAATGA+AGG	-	chr7.4:1066039-1066058	None:intergenic	50.0%
	ATCCCTTTGAACCGAGGGAA+GGG	-	chr7.4:1065953-1065972	None:intergenic	50.0%
	CCACCTTCCTCACCAATGAA+GGG	-	chr7.4:1066038-1066057	None:intergenic	50.0%
	GAAGGGTTTGCAGTTGCATG+AGG	-	chr7.4:1065727-1065746	None:intergenic	50.0%
	TGACCCTTCATTGGTGAGGA+AGG	+	chr7.4:1066032-1066051	MS.gene20025:CDS	50.0%
	TTCATTGGTGAGGAAGGTGG+TGG	+	chr7.4:1066038-1066057	MS.gene20025:CDS	50.0%
	TTCCATCACAAGCCTGCTAC+TGG	+	chr7.4:1065886-1065905	MS.gene20025:CDS	50.0%
!	GTGTTGACCCTTCATTGGTG+AGG	+	chr7.4:1066028-1066047	MS.gene20025:CDS	50.0%
!	TGAAGGGCATGTGGTTGGTT+TGG	+	chr7.4:1066074-1066093	MS.gene20025:CDS	50.0%
!	TGGGTCTTTGAGGGTAGTGA+AGG	-	chr7.4:1065832-1065851	None:intergenic	50.0%
	ACACCCTTCCCTCGGTTCAA+AGG	+	chr7.4:1065947-1065966	MS.gene20025:CDS	55.0%
	AGCCAGTAGCAGGCTTGTGA+TGG	-	chr7.4:1065891-1065910	None:intergenic	55.0%
	CACCCTTCCCTCGGTTCAAA+GGG	+	chr7.4:1065948-1065967	MS.gene20025:CDS	55.0%
	CATCCCTTTGAACCGAGGGA+AGG	-	chr7.4:1065954-1065973	None:intergenic	55.0%
	CCCTTCATTGGTGAGGAAGG+TGG	+	chr7.4:1066035-1066054	MS.gene20025:CDS	55.0%
!	TTGAACCGAGGGAAGGGTGT+TGG	-	chr7.4:1065947-1065966	None:intergenic	55.0%
	GCAGCAGCATAGCCAGTAGC+AGG	-	chr7.4:1065901-1065920	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	1065643	1066275	1065643	ID=MS.gene20025
chr7.4	mRNA	1065643	1066275	1065643	ID=MS.gene20025.t1;Parent=MS.gene20025
chr7.4	exon	1065643	1066275	1065643	ID=MS.gene20025.t1.exon1;Parent=MS.gene20025.t1
chr7.4	CDS	1065643	1066275	1065643	ID=cds.MS.gene20025.t1;Parent=MS.gene20025.t1

Gene Sequence

>MS.gene20025

ATGGATGCTTTCTCAAGCTCTGTTTCAACCCTCAAAATCCCACCAACAACCAACCGTGAATTCTATCACTTCACAAGAACTCCTCATGCAACTGCAAACCCTTCTCATCCTCAACAACCAAAATCTCATTTCTCTTCCAACTTAGTCACCCAAAAAACAAAAACTTTCTCACACAACAATCATTCTCCTTCACTACCCTCAAAGACCCAACCTCTCAAACACAAACCATCTTCTTCTCAAGTATTCCATCACAAGCCTGCTACTGGCTATGCTGCTGCAATCATAGATGTAGCTCAAAAAACCAACACCCTTCCCTCGGTTCAAAGGGATGTTCAAAGACTCTTGAAGTTCCTCCAAAAACTGAAATTTCAATCAGTTGATGTTGGTGTTGACCCTTCATTGGTGAGGAAGGTGGTGGAGCAGAGAAAATTTGAAGGGCATGTGGTTGGTTTGGTGAAGATGCTGATGAAGAAGAACAAGCTGGGAATTGTTGAGGAAGTGTTGGAAGAGTTCATGAGGATTTATGATGAATTATGTGGAACTCAAGTTGTTTTGGTTTCATCAAAAGAGAAATTGGTGAAGATGAAATGTTTGGGATTGCCAAAAGTGTGCAGAAACTCAGTGGTGCAGTGA

Protein sequence

>MS.gene20025.t1

MDAFSSSVSTLKIPPTTNREFYHFTRTPHATANPSHPQQPKSHFSSNLVTQKTKTFSHNNHSPSLPSKTQPLKHKPSSSQVFHHKPATGYAAAIIDVAQKTNTLPSVQRDVQRLLKFLQKLKFQSVDVGVDPSLVRKVVEQRKFEGHVVGLVKMLMKKNKLGIVEEVLEEFMRIYDELCGTQVVLVSSKEKLVKMKCLGLPKVCRNSVVQ