Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062227.t1 | XP_013468793.1 | 96.2 | 133 | 3 | 1 | 3 | 135 | 2 | 132 | 4.70E-66 | 260.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062227.t1 | A0A072VXN1 | 96.2 | 133 | 3 | 1 | 3 | 135 | 2 | 132 | 3.4e-66 | 260.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene062227 | 0.83368 | 4.64E-56 | -1.69E-46 |
| MS.gene049171 | MS.gene062227 | 0.816776 | 4.64E-52 | -1.69E-46 |
| MS.gene049173 | MS.gene062227 | 0.815585 | 8.57E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene062227 | 0.836608 | 8.47E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene062227 | 0.811336 | 7.37E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene062227 | 0.80858 | 2.89E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene062227 | 0.849312 | 3.51E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene062227 | 0.831564 | 1.55E-55 | -1.69E-46 |
| MS.gene049396 | MS.gene062227 | 0.826691 | 2.36E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene062227 | 0.827247 | 1.74E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene062227 | 0.909547 | 5.05E-82 | -1.69E-46 |
| MS.gene049661 | MS.gene062227 | 0.826814 | 2.21E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene062227 | 0.821869 | 3.21E-53 | -1.69E-46 |
| MS.gene049794 | MS.gene062227 | 0.819071 | 1.41E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene062227 | 0.859518 | 3.91E-63 | -1.69E-46 |
| MS.gene050122 | MS.gene062227 | 0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene062227 | 0.806187 | 9.29E-50 | -1.69E-46 |
| MS.gene050397 | MS.gene062227 | 0.810468 | 1.14E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene062227 | 0.824861 | 6.42E-54 | -1.69E-46 |
| MS.gene050499 | MS.gene062227 | 0.815313 | 9.86E-52 | -1.69E-46 |
| MS.gene050502 | MS.gene062227 | 0.801174 | 1.02E-48 | -1.69E-46 |
| MS.gene050520 | MS.gene062227 | 0.81142 | 7.06E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene062227 | 0.833607 | 4.84E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene062227 | 0.867739 | 1.10E-65 | -1.69E-46 |
| MS.gene050625 | MS.gene062227 | 0.860361 | 2.18E-63 | -1.69E-46 |
| MS.gene050670 | MS.gene062227 | 0.889541 | 2.21E-73 | -1.69E-46 |
| MS.gene050686 | MS.gene062227 | 0.812686 | 3.74E-51 | -1.69E-46 |
| MS.gene050690 | MS.gene062227 | 0.804209 | 2.41E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene062227 | 0.804119 | 2.52E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene062227 | 0.873233 | 1.72E-67 | -1.69E-46 |
| MS.gene050772 | MS.gene062227 | 0.899691 | 1.54E-77 | -1.69E-46 |
| MS.gene05080 | MS.gene062227 | 0.81495 | 1.19E-51 | -1.69E-46 |
| MS.gene05081 | MS.gene062227 | 0.824606 | 7.37E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene062227 | 0.868017 | 8.92E-66 | -1.69E-46 |
| MS.gene05105 | MS.gene062227 | 0.931529 | 3.30E-94 | -1.69E-46 |
| MS.gene051255 | MS.gene062227 | 0.81737 | 3.42E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene062227 | 0.844559 | 7.01E-59 | -1.69E-46 |
| MS.gene051387 | MS.gene062227 | 0.878677 | 2.31E-69 | -1.69E-46 |
| MS.gene051525 | MS.gene062227 | 0.851502 | 8.51E-61 | -1.69E-46 |
| MS.gene051605 | MS.gene062227 | 0.813553 | 2.42E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene062227 | 0.850998 | 1.18E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene062227 | 0.835264 | 1.86E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene062227 | 0.811133 | 8.16E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene062227 | 0.806248 | 9.02E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene062227 | 0.84136 | 4.98E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene062227 | 0.848581 | 5.60E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene062227 | 0.822656 | 2.11E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene062227 | 0.846804 | 1.73E-59 | -1.69E-46 |
| MS.gene052271 | MS.gene062227 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene062227 | 0.832466 | 9.30E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene062227 | 0.838113 | 3.49E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene062227 | 0.814584 | 1.43E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene062227 | 0.854188 | 1.45E-61 | -1.69E-46 |
| MS.gene052414 | MS.gene062227 | 0.861694 | 8.57E-64 | -1.69E-46 |
| MS.gene052421 | MS.gene062227 | 0.867297 | 1.52E-65 | -1.69E-46 |
| MS.gene052481 | MS.gene062227 | 0.879938 | 8.27E-70 | -1.69E-46 |
| MS.gene052484 | MS.gene062227 | 0.872456 | 3.14E-67 | -1.69E-46 |
| MS.gene052485 | MS.gene062227 | 0.851418 | 8.99E-61 | -1.69E-46 |
| MS.gene052501 | MS.gene062227 | 0.852085 | 5.82E-61 | -1.69E-46 |
| MS.gene052503 | MS.gene062227 | 0.822221 | 2.66E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene062227 | 0.850574 | 1.56E-60 | -1.69E-46 |
| MS.gene052615 | MS.gene062227 | 0.864666 | 1.03E-64 | -1.69E-46 |
| MS.gene052823 | MS.gene062227 | 0.813595 | 2.36E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene062227 | 0.808504 | 3.00E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene062227 | 0.803554 | 3.30E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene062227 | 0.802733 | 4.88E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene062227 | 0.809652 | 1.70E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene062227 | 0.894755 | 1.83E-75 | -1.69E-46 |
| MS.gene052999 | MS.gene062227 | 0.816957 | 4.23E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene062227 | 0.813444 | 2.55E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene062227 | 0.862228 | 5.88E-64 | -1.69E-46 |
| MS.gene053104 | MS.gene062227 | 0.862477 | 4.93E-64 | -1.69E-46 |
| MS.gene053169 | MS.gene062227 | 0.805701 | 1.18E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene062227 | 0.879812 | 9.18E-70 | -1.69E-46 |
| MS.gene053209 | MS.gene062227 | 0.882953 | 6.76E-71 | -1.69E-46 |
| MS.gene053213 | MS.gene062227 | 0.872339 | 3.43E-67 | -1.69E-46 |
| MS.gene053286 | MS.gene062227 | 0.861907 | 7.38E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene062227 | 0.837365 | 5.43E-57 | -1.69E-46 |
| MS.gene05335 | MS.gene062227 | 0.806849 | 6.74E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene062227 | 0.840071 | 1.08E-57 | -1.69E-46 |
| MS.gene053449 | MS.gene062227 | 0.854022 | 1.62E-61 | -1.69E-46 |
| MS.gene053574 | MS.gene062227 | 0.88849 | 5.64E-73 | -1.69E-46 |
| MS.gene053626 | MS.gene062227 | 0.807999 | 3.84E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene062227 | 0.83297 | 6.97E-56 | -1.69E-46 |
| MS.gene053758 | MS.gene062227 | 0.820817 | 5.61E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene062227 | 0.812895 | 3.37E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene062227 | 0.837617 | 4.68E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene062227 | 0.842165 | 3.05E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene062227 | 0.814594 | 1.42E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene062227 | 0.836355 | 9.82E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene062227 | 0.860852 | 1.55E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene062227 | 0.828679 | 7.86E-55 | -1.69E-46 |
| MS.gene054927 | MS.gene062227 | 0.884396 | 1.99E-71 | -1.69E-46 |
| MS.gene05494 | MS.gene062227 | 0.82149 | 3.93E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene062227 | 0.874148 | 8.47E-68 | -1.69E-46 |
| MS.gene055116 | MS.gene062227 | 0.888441 | 5.89E-73 | -1.69E-46 |
| MS.gene055206 | MS.gene062227 | 0.845744 | 3.36E-59 | -1.69E-46 |
| MS.gene055212 | MS.gene062227 | 0.826229 | 3.04E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene062227 | 0.826374 | 2.81E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene062227 | 0.85213 | 5.65E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene062227 | 0.825488 | 4.56E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene062227 | 0.818335 | 2.07E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene062227 | 0.820842 | 5.54E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene062227 | 0.815847 | 7.50E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene062227 | 0.825469 | 4.61E-54 | -1.69E-46 |
| MS.gene055647 | MS.gene062227 | 0.823691 | 1.21E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene062227 | 0.89307 | 8.85E-75 | -1.69E-46 |
| MS.gene055741 | MS.gene062227 | 0.842479 | 2.52E-58 | -1.69E-46 |
| MS.gene055744 | MS.gene062227 | 0.844075 | 9.46E-59 | -1.69E-46 |
| MS.gene055909 | MS.gene062227 | 0.841844 | 3.71E-58 | -1.69E-46 |
| MS.gene055911 | MS.gene062227 | 0.844466 | 7.43E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene062227 | 0.852468 | 4.53E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene062227 | 0.830657 | 2.60E-55 | -1.69E-46 |
| MS.gene05602 | MS.gene062227 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene062227 | 0.822406 | 2.41E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene062227 | 0.85171 | 7.43E-61 | -1.69E-46 |
| MS.gene056191 | MS.gene062227 | 0.845585 | 3.71E-59 | -1.69E-46 |
| MS.gene056374 | MS.gene062227 | 0.81433 | 1.63E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene062227 | 0.844852 | 5.85E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene062227 | 0.838372 | 2.99E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene062227 | 0.838765 | 2.37E-57 | -1.69E-46 |
| MS.gene056448 | MS.gene062227 | 0.854755 | 9.96E-62 | -1.69E-46 |
| MS.gene056511 | MS.gene062227 | 0.873413 | 1.50E-67 | -1.69E-46 |
| MS.gene05664 | MS.gene062227 | 0.826281 | 2.96E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene062227 | 0.81636 | 5.76E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene062227 | 0.809333 | 1.99E-50 | -1.69E-46 |
| MS.gene05666 | MS.gene062227 | 0.80625 | 9.01E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene062227 | 0.81841 | 1.99E-52 | -1.69E-46 |
| MS.gene056877 | MS.gene062227 | 0.806029 | 1.00E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene062227 | 0.836794 | 7.59E-57 | -1.69E-46 |
| MS.gene056946 | MS.gene062227 | 0.801217 | 9.99E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene062227 | 0.819369 | 1.20E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene062227 | 0.807692 | 4.46E-50 | -1.69E-46 |
| MS.gene057048 | MS.gene062227 | 0.808142 | 3.58E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene062227 | 0.859044 | 5.43E-63 | -1.69E-46 |
| MS.gene057124 | MS.gene062227 | 0.856094 | 4.06E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene062227 | 0.818096 | 2.34E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene062227 | 0.837659 | 4.56E-57 | -1.69E-46 |
| MS.gene057196 | MS.gene062227 | 0.800421 | 1.45E-48 | -1.69E-46 |
| MS.gene057310 | MS.gene062227 | 0.81972 | 1.00E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene062227 | 0.878236 | 3.31E-69 | -1.69E-46 |
| MS.gene057416 | MS.gene062227 | 0.880419 | 5.58E-70 | -1.69E-46 |
| MS.gene057658 | MS.gene062227 | 0.823952 | 1.05E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene062227 | 0.847828 | 9.03E-60 | -1.69E-46 |
| MS.gene057749 | MS.gene062227 | 0.842511 | 2.47E-58 | -1.69E-46 |
| MS.gene057823 | MS.gene062227 | 0.845994 | 2.87E-59 | -1.69E-46 |
| MS.gene057831 | MS.gene062227 | 0.801947 | 7.08E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene062227 | 0.807708 | 4.43E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene062227 | 0.835166 | 1.97E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene062227 | 0.841006 | 6.17E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene062227 | 0.850289 | 1.87E-60 | -1.69E-46 |
| MS.gene058082 | MS.gene062227 | 0.817763 | 2.79E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene062227 | 0.823613 | 1.26E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene062227 | 0.86319 | 2.97E-64 | -1.69E-46 |
| MS.gene058233 | MS.gene062227 | 0.808972 | 2.38E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene062227 | 0.814984 | 1.17E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene062227 | 0.824236 | 9.00E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene062227 | 0.822885 | 1.86E-53 | -1.69E-46 |
| MS.gene058376 | MS.gene062227 | 0.86339 | 2.58E-64 | -1.69E-46 |
| MS.gene05837 | MS.gene062227 | 0.835858 | 1.31E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene062227 | 0.830172 | 3.41E-55 | -1.69E-46 |
| MS.gene058444 | MS.gene062227 | 0.858311 | 8.99E-63 | -1.69E-46 |
| MS.gene058544 | MS.gene062227 | 0.834241 | 3.36E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene062227 | 0.822898 | 1.85E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene062227 | 0.882449 | 1.03E-70 | -1.69E-46 |
| MS.gene058723 | MS.gene062227 | 0.826445 | 2.70E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene062227 | 0.81228 | 4.59E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene062227 | 0.829866 | 4.05E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene062227 | 0.816069 | 6.69E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene062227 | 0.813066 | 3.09E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene062227 | 0.866489 | 2.75E-65 | -1.69E-46 |
| MS.gene059022 | MS.gene062227 | 0.800702 | 1.27E-48 | -1.69E-46 |
| MS.gene059023 | MS.gene062227 | 0.836798 | 7.58E-57 | -1.69E-46 |
| MS.gene059029 | MS.gene062227 | 0.807313 | 5.37E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene062227 | 0.804426 | 2.17E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene062227 | 0.816602 | 5.08E-52 | -1.69E-46 |
| MS.gene059141 | MS.gene062227 | 0.815405 | 9.40E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene062227 | 0.827098 | 1.89E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene062227 | 0.843705 | 1.19E-58 | -1.69E-46 |
| MS.gene059368 | MS.gene062227 | 0.820682 | 6.03E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene062227 | 0.817966 | 2.51E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene062227 | 0.840951 | 6.38E-58 | -1.69E-46 |
| MS.gene059536 | MS.gene062227 | 0.872404 | 3.27E-67 | -1.69E-46 |
| MS.gene059667 | MS.gene062227 | 0.817647 | 2.96E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene062227 | 0.814113 | 1.82E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene062227 | 0.816272 | 6.02E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene062227 | 0.801133 | 1.04E-48 | -1.69E-46 |
| MS.gene059680 | MS.gene062227 | 0.800002 | 1.77E-48 | -1.69E-46 |
| MS.gene059688 | MS.gene062227 | 0.898429 | 5.35E-77 | -1.69E-46 |
| MS.gene059692 | MS.gene062227 | 0.884241 | 2.27E-71 | -1.69E-46 |
| MS.gene059695 | MS.gene062227 | 0.891883 | 2.64E-74 | -1.69E-46 |
| MS.gene059711 | MS.gene062227 | 0.853091 | 3.00E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene062227 | 0.85423 | 1.41E-61 | -1.69E-46 |
| MS.gene059801 | MS.gene062227 | 0.817127 | 3.87E-52 | -1.69E-46 |
| MS.gene059807 | MS.gene062227 | 0.815302 | 9.91E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene062227 | 0.847541 | 1.08E-59 | -1.69E-46 |
| MS.gene059960 | MS.gene062227 | 0.809227 | 2.10E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene062227 | 0.82743 | 1.57E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene062227 | 0.871347 | 7.33E-67 | -1.69E-46 |
| MS.gene060469 | MS.gene062227 | 0.808016 | 3.81E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene062227 | 0.831877 | 1.30E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene062227 | 0.871844 | 5.01E-67 | -1.69E-46 |
| MS.gene060818 | MS.gene062227 | 0.809389 | 1.94E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene062227 | 0.867825 | 1.03E-65 | -1.69E-46 |
| MS.gene060837 | MS.gene062227 | 0.914118 | 2.79E-84 | -1.69E-46 |
| MS.gene06092 | MS.gene062227 | 0.864201 | 1.44E-64 | -1.69E-46 |
| MS.gene06097 | MS.gene062227 | 0.808515 | 2.98E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene062227 | 0.842198 | 2.99E-58 | -1.69E-46 |
| MS.gene061049 | MS.gene062227 | 0.803244 | 3.82E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene062227 | -0.80101 | 1.10E-48 | -1.69E-46 |
| MS.gene061150 | MS.gene062227 | 0.81474 | 1.32E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene062227 | 0.864229 | 1.41E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene062227 | 0.8338 | 4.33E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062227.t1 | MTR_1g076840 | 96.241 | 133 | 3 | 1 | 3 | 135 | 2 | 132 | 5.41e-91 | 259 |
| MS.gene062227.t1 | MTR_6g060170 | 82.474 | 97 | 17 | 0 | 39 | 135 | 2 | 98 | 1.70e-57 | 174 |
| MS.gene062227.t1 | MTR_1g069370 | 60.440 | 91 | 36 | 0 | 45 | 135 | 9 | 99 | 4.59e-38 | 125 |
| MS.gene062227.t1 | MTR_7g099200 | 59.341 | 91 | 37 | 0 | 45 | 135 | 5 | 95 | 2.70e-37 | 123 |
| MS.gene062227.t1 | MTR_6g059920 | 53.763 | 93 | 43 | 0 | 40 | 132 | 33 | 125 | 1.54e-30 | 106 |
| MS.gene062227.t1 | MTR_5g005820 | 51.087 | 92 | 45 | 0 | 40 | 131 | 2 | 93 | 2.45e-26 | 95.1 |
| MS.gene062227.t1 | MTR_6g060000 | 86.047 | 43 | 6 | 0 | 76 | 118 | 19 | 61 | 3.66e-22 | 83.6 |
| MS.gene062227.t1 | MTR_6g060090 | 68.000 | 50 | 14 | 1 | 68 | 117 | 9 | 56 | 2.21e-18 | 73.6 |
| MS.gene062227.t1 | MTR_1g086000 | 32.500 | 80 | 54 | 0 | 37 | 116 | 39 | 118 | 1.41e-12 | 61.2 |
| MS.gene062227.t1 | MTR_6g060030 | 55.172 | 58 | 8 | 1 | 96 | 135 | 7 | 64 | 1.63e-12 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062227.t1 | AT4G10300 | 67.669 | 133 | 39 | 3 | 6 | 135 | 3 | 134 | 1.03e-59 | 181 |
| MS.gene062227.t1 | AT3G04300 | 56.044 | 91 | 40 | 0 | 45 | 135 | 1 | 91 | 1.65e-35 | 118 |
| MS.gene062227.t1 | AT4G28703 | 48.454 | 97 | 41 | 1 | 47 | 134 | 8 | 104 | 4.92e-29 | 102 |
| MS.gene062227.t1 | AT4G10280 | 48.454 | 97 | 47 | 1 | 42 | 135 | 43 | 139 | 1.55e-26 | 97.1 |
| MS.gene062227.t1 | AT4G10290 | 43.617 | 94 | 50 | 1 | 42 | 132 | 15 | 108 | 3.28e-20 | 80.1 |
| MS.gene062227.t1 | AT2G32180 | 30.380 | 79 | 55 | 0 | 41 | 119 | 40 | 118 | 9.89e-12 | 58.9 |
| MS.gene062227.t1 | AT2G32180 | 30.380 | 79 | 55 | 0 | 41 | 119 | 40 | 118 | 9.89e-12 | 58.9 |
| MS.gene062227.t1 | AT2G32650 | 30.380 | 79 | 55 | 0 | 41 | 119 | 40 | 118 | 1.09e-11 | 58.5 |
| MS.gene062227.t1 | AT2G32650 | 30.380 | 79 | 55 | 0 | 41 | 119 | 40 | 118 | 1.09e-11 | 58.5 |
Find 34 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGTACAACTCATCCCTTT+TGG | 0.324093 | 1.1:-57625725 | None:intergenic |
| TGAAATTTCTGCTGGTGATT+TGG | 0.359064 | 1.1:+57625694 | MS.gene062227:CDS |
| AACAGAGACATGCTATCTTT+TGG | 0.368243 | 1.1:+57625628 | MS.gene062227:CDS |
| CAAAAGGGATGAGTTGTACT+TGG | 0.379437 | 1.1:+57625726 | MS.gene062227:CDS |
| CTTGGTAGCAGTCAAATGTT+TGG | 0.389927 | 1.1:-57625023 | None:intergenic |
| ACAACTCTTCTCCTTGTTGA+AGG | 0.406999 | 1.1:-57625067 | None:intergenic |
| AGCTCACTCAACTTGGTGTT+AGG | 0.443465 | 1.1:+57625149 | MS.gene062227:CDS |
| AACACCAAGTTGAGTGAGCT+TGG | 0.455326 | 1.1:-57625146 | None:intergenic |
| AGTTGAGTGAGCTTGGACTC+AGG | 0.458878 | 1.1:-57625139 | None:intergenic |
| GGCAAAGTTACACTTACCTT+GGG | 0.470688 | 1.1:-57625046 | None:intergenic |
| CACTCCTAGTGGGGCTAATG+AGG | 0.472036 | 1.1:+57625667 | MS.gene062227:CDS |
| TATGTCCATGGAAAATTACT+TGG | 0.480875 | 1.1:-57625599 | None:intergenic |
| CTCAACTTGGTGTTAGGCAG+TGG | 0.492268 | 1.1:+57625155 | MS.gene062227:CDS |
| TGTACTTGGGATGTTTCTGT+TGG | 0.499364 | 1.1:+57625740 | MS.gene062227:CDS |
| AGGCAAAGTTACACTTACCT+TGG | 0.501016 | 1.1:-57625047 | None:intergenic |
| TTGGGATGTTTCTGTTGGTG+TGG | 0.510879 | 1.1:+57625745 | MS.gene062227:CDS |
| GAGTCCAAGCTCACTCAACT+TGG | 0.526860 | 1.1:+57625142 | MS.gene062227:CDS |
| AGTTACACTTACCTTGGGCT+TGG | 0.544555 | 1.1:-57625041 | None:intergenic |
| AGTCAAATGTTTGGTTTGTG+AGG | 0.547845 | 1.1:-57625014 | None:intergenic |
| GTCCATGGAAAATTACTTGG+AGG | 0.553197 | 1.1:-57625596 | None:intergenic |
| GCAGCTGTCACAGAGAAACT+TGG | 0.559175 | 1.1:+57625094 | MS.gene062227:CDS |
| AAGTGAAGGTCACTCCTAGT+GGG | 0.564562 | 1.1:+57625657 | MS.gene062227:CDS |
| TCCATGGAAAATTACTTGGA+GGG | 0.566600 | 1.1:-57625595 | None:intergenic |
| AAAGTGAAGGTCACTCCTAG+TGG | 0.587646 | 1.1:+57625656 | MS.gene062227:CDS |
| GAGGCAGTTGAAATTTCTGC+TGG | 0.589901 | 1.1:+57625686 | MS.gene062227:CDS |
| TGAGTGAGCTTGGACTCAGG+AGG | 0.606187 | 1.1:-57625136 | None:intergenic |
| AAAAGGGATGAGTTGTACTT+GGG | 0.609307 | 1.1:+57625727 | MS.gene062227:CDS |
| ATGGCATCATCATCATGTGT+AGG | 0.613363 | 1.1:+57624980 | MS.gene062227:CDS |
| GTGTAACTTTGCCTTCAACA+AGG | 0.618419 | 1.1:+57625056 | MS.gene062227:CDS |
| TCTGTTGCATCATATGTCCA+TGG | 0.622988 | 1.1:-57625611 | None:intergenic |
| GAGTGAGCTTGGACTCAGGA+GGG | 0.632998 | 1.1:-57625135 | None:intergenic |
| ACTGCCTCATTAGCCCCACT+AGG | 0.662701 | 1.1:-57625671 | None:intergenic |
| TTTGACTGCTACCAAGCCCA+AGG | 0.672230 | 1.1:+57625030 | MS.gene062227:CDS |
| AGTGAAGGTCACTCCTAGTG+GGG | 0.682734 | 1.1:+57625658 | MS.gene062227:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTATTTTAATGAAAA+GGG | + | chr1.1:57625287-57625306 | MS.gene062227:intron | 10.0% |
| !!! | TGATTTTTATTTTAATGAAA+AGG | + | chr1.1:57625286-57625305 | MS.gene062227:intron | 10.0% |
| !! | ACAACATAAAAAATCTTTCA+CGG | + | chr1.1:57625484-57625503 | MS.gene062227:intron | 20.0% |
| !! | TACTGTTAAAGTCATATATA+TGG | - | chr1.1:57625412-57625431 | None:intergenic | 20.0% |
| !!! | AAACGTTTTTTATGATTTGA+CGG | + | chr1.1:57625447-57625466 | MS.gene062227:intron | 20.0% |
| ! | AACAAGATAATGAAGAAATG+TGG | - | chr1.1:57625193-57625212 | None:intergenic | 25.0% |
| ! | AAGAAATGTGGTATTTACTT+GGG | - | chr1.1:57625181-57625200 | None:intergenic | 25.0% |
| ! | ATATGACTTTAACAGTAGTT+AGG | + | chr1.1:57625415-57625434 | MS.gene062227:intron | 25.0% |
| ! | TGGTGTAAATAAAAACAGAT+GGG | + | chr1.1:57625568-57625587 | MS.gene062227:intron | 25.0% |
| ! | TTAACGAGATTAATACACTA+TGG | + | chr1.1:57625365-57625384 | MS.gene062227:intron | 25.0% |
| ! | TTAGAATAATAGACATGATG+AGG | - | chr1.1:57625224-57625243 | None:intergenic | 25.0% |
| ! | TTGGTGTAAATAAAAACAGA+TGG | + | chr1.1:57625567-57625586 | MS.gene062227:intron | 25.0% |
| !!! | GTTTCTTACATTTTTTCTCA+TGG | + | chr1.1:57625252-57625271 | MS.gene062227:intron | 25.0% |
| GAAGAAATGTGGTATTTACT+TGG | - | chr1.1:57625182-57625201 | None:intergenic | 30.0% | |
| GGTGTAAATAAAAACAGATG+GGG | + | chr1.1:57625569-57625588 | MS.gene062227:intron | 30.0% | |
| TATGTCCATGGAAAATTACT+TGG | - | chr1.1:57625602-57625621 | None:intergenic | 30.0% | |
| !! | ATTTGGTTGTTTTCCCAAAA+GGG | + | chr1.1:57625711-57625730 | MS.gene062227:CDS | 30.0% |
| !!! | TCTTACATTTTTTCTCATGG+TGG | + | chr1.1:57625255-57625274 | MS.gene062227:intron | 30.0% |
| AAAAGGGATGAGTTGTACTT+GGG | + | chr1.1:57625727-57625746 | MS.gene062227:CDS | 35.0% | |
| TCCATGGAAAATTACTTGGA+GGG | - | chr1.1:57625598-57625617 | None:intergenic | 35.0% | |
| TGAAATTTCTGCTGGTGATT+TGG | + | chr1.1:57625694-57625713 | MS.gene062227:CDS | 35.0% | |
| ! | AACAGAGACATGCTATCTTT+TGG | + | chr1.1:57625628-57625647 | MS.gene062227:CDS | 35.0% |
| ! | AAGTACAACTCATCCCTTTT+GGG | - | chr1.1:57625727-57625746 | None:intergenic | 35.0% |
| ! | TGACTGTGTACACACATTTT+TGG | + | chr1.1:57625548-57625567 | MS.gene062227:intron | 35.0% |
| !! | AGTCAAATGTTTGGTTTGTG+AGG | - | chr1.1:57625017-57625036 | None:intergenic | 35.0% |
| !! | GATTTGGTTGTTTTCCCAAA+AGG | + | chr1.1:57625710-57625729 | MS.gene062227:CDS | 35.0% |
| !! | TCTTTTGGAAGGAAAAGTGA+AGG | + | chr1.1:57625643-57625662 | MS.gene062227:CDS | 35.0% |
| ACAACTCTTCTCCTTGTTGA+AGG | - | chr1.1:57625070-57625089 | None:intergenic | 40.0% | |
| ACTAGAAGAGCAACTAGCAT+AGG | - | chr1.1:57625346-57625365 | None:intergenic | 40.0% | |
| AGGCAAAGTTACACTTACCT+TGG | - | chr1.1:57625050-57625069 | None:intergenic | 40.0% | |
| ATGGCATCATCATCATGTGT+AGG | + | chr1.1:57624980-57624999 | MS.gene062227:CDS | 40.0% | |
| CAAAAGGGATGAGTTGTACT+TGG | + | chr1.1:57625726-57625745 | MS.gene062227:CDS | 40.0% | |
| CTAGAAGAGCAACTAGCATA+GGG | - | chr1.1:57625345-57625364 | None:intergenic | 40.0% | |
| GGCAAAGTTACACTTACCTT+GGG | - | chr1.1:57625049-57625068 | None:intergenic | 40.0% | |
| GTCCATGGAAAATTACTTGG+AGG | - | chr1.1:57625599-57625618 | None:intergenic | 40.0% | |
| GTGTAACTTTGCCTTCAACA+AGG | + | chr1.1:57625056-57625075 | MS.gene062227:CDS | 40.0% | |
| TCTGTTGCATCATATGTCCA+TGG | - | chr1.1:57625614-57625633 | None:intergenic | 40.0% | |
| ! | CAAGTACAACTCATCCCTTT+TGG | - | chr1.1:57625728-57625747 | None:intergenic | 40.0% |
| ! | CTTGGTAGCAGTCAAATGTT+TGG | - | chr1.1:57625026-57625045 | None:intergenic | 40.0% |
| ! | GAGACATGCTATCTTTTGGA+AGG | + | chr1.1:57625632-57625651 | MS.gene062227:CDS | 40.0% |
| ! | TGTACTTGGGATGTTTCTGT+TGG | + | chr1.1:57625740-57625759 | MS.gene062227:CDS | 40.0% |
| AAAGTGAAGGTCACTCCTAG+TGG | + | chr1.1:57625656-57625675 | MS.gene062227:CDS | 45.0% | |
| AAGTGAAGGTCACTCCTAGT+GGG | + | chr1.1:57625657-57625676 | MS.gene062227:CDS | 45.0% | |
| AGTTACACTTACCTTGGGCT+TGG | - | chr1.1:57625044-57625063 | None:intergenic | 45.0% | |
| GAGGCAGTTGAAATTTCTGC+TGG | + | chr1.1:57625686-57625705 | MS.gene062227:CDS | 45.0% | |
| ! | AACACCAAGTTGAGTGAGCT+TGG | - | chr1.1:57625149-57625168 | None:intergenic | 45.0% |
| ! | GCCCTCCAAGTAATTTTCCA+TGG | + | chr1.1:57625594-57625613 | MS.gene062227:CDS | 45.0% |
| ! | TTGGGATGTTTCTGTTGGTG+TGG | + | chr1.1:57625745-57625764 | MS.gene062227:CDS | 45.0% |
| !! | AGCTCACTCAACTTGGTGTT+AGG | + | chr1.1:57625149-57625168 | MS.gene062227:CDS | 45.0% |
| AGTGAAGGTCACTCCTAGTG+GGG | + | chr1.1:57625658-57625677 | MS.gene062227:CDS | 50.0% | |
| AGTTGAGTGAGCTTGGACTC+AGG | - | chr1.1:57625142-57625161 | None:intergenic | 50.0% | |
| GAGTCCAAGCTCACTCAACT+TGG | + | chr1.1:57625142-57625161 | MS.gene062227:CDS | 50.0% | |
| GCAGCTGTCACAGAGAAACT+TGG | + | chr1.1:57625094-57625113 | MS.gene062227:CDS | 50.0% | |
| TTTGACTGCTACCAAGCCCA+AGG | + | chr1.1:57625030-57625049 | MS.gene062227:CDS | 50.0% | |
| !! | CTCAACTTGGTGTTAGGCAG+TGG | + | chr1.1:57625155-57625174 | MS.gene062227:CDS | 50.0% |
| ACTGCCTCATTAGCCCCACT+AGG | - | chr1.1:57625674-57625693 | None:intergenic | 55.0% | |
| CACTCCTAGTGGGGCTAATG+AGG | + | chr1.1:57625667-57625686 | MS.gene062227:CDS | 55.0% | |
| GAGTGAGCTTGGACTCAGGA+GGG | - | chr1.1:57625138-57625157 | None:intergenic | 55.0% | |
| TGAGTGAGCTTGGACTCAGG+AGG | - | chr1.1:57625139-57625158 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 57624980 | 57625790 | 57624980 | ID=MS.gene062227 |
| chr1.1 | mRNA | 57624980 | 57625790 | 57624980 | ID=MS.gene062227.t1;Parent=MS.gene062227 |
| chr1.1 | exon | 57624980 | 57625182 | 57624980 | ID=MS.gene062227.t1.exon1;Parent=MS.gene062227.t1 |
| chr1.1 | CDS | 57624980 | 57625182 | 57624980 | ID=cds.MS.gene062227.t1;Parent=MS.gene062227.t1 |
| chr1.1 | exon | 57625586 | 57625790 | 57625586 | ID=MS.gene062227.t1.exon2;Parent=MS.gene062227.t1 |
| chr1.1 | CDS | 57625586 | 57625790 | 57625586 | ID=cds.MS.gene062227.t1;Parent=MS.gene062227.t1 |
| Gene Sequence |
| Protein sequence |
