Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06919.t1 | XP_003602259.1 | 92 | 666 | 26 | 5 | 1 | 650 | 1 | 655 | 0.00E+00 | 1246.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06919.t1 | Q9FNF2 | 70.0 | 600 | 153 | 6 | 71 | 649 | 57 | 650 | 2.4e-257 | 889.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06919.t1 | G7J7E9 | 92.0 | 666 | 26 | 5 | 1 | 650 | 1 | 655 | 0.0e+00 | 1246.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene06919 | 0.826318 | 2.90E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene06919 | 0.836602 | 8.50E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene06919 | 0.831599 | 1.52E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene06919 | 0.828001 | 1.15E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene06919 | 0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene06919 | 0.847945 | 8.39E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene06919 | 0.855038 | 8.25E-62 | -1.69E-46 |
| MS.gene049369 | MS.gene06919 | 0.837818 | 4.15E-57 | -1.69E-46 |
| MS.gene049396 | MS.gene06919 | 0.851242 | 1.01E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene06919 | 0.833816 | 4.29E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene06919 | 0.841811 | 3.79E-58 | -1.69E-46 |
| MS.gene049805 | MS.gene06919 | 0.826711 | 2.34E-54 | -1.69E-46 |
| MS.gene050163 | MS.gene06919 | 0.811915 | 5.51E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene06919 | 0.819157 | 1.35E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene06919 | 0.833366 | 5.56E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene06919 | 0.831268 | 1.84E-55 | -1.69E-46 |
| MS.gene050338 | MS.gene06919 | -0.8124 | 4.32E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene06919 | 0.844977 | 5.41E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene06919 | 0.809485 | 1.85E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene06919 | 0.824642 | 7.23E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene06919 | 0.800358 | 1.50E-48 | -1.69E-46 |
| MS.gene050686 | MS.gene06919 | 0.817753 | 2.80E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene06919 | 0.867194 | 1.64E-65 | -1.69E-46 |
| MS.gene05080 | MS.gene06919 | 0.84446 | 7.46E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene06919 | 0.809806 | 1.58E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene06919 | 0.810219 | 1.29E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene06919 | 0.842493 | 2.50E-58 | -1.69E-46 |
| MS.gene051617 | MS.gene06919 | 0.800801 | 1.22E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene06919 | 0.816286 | 5.98E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene06919 | 0.826977 | 2.02E-54 | -1.69E-46 |
| MS.gene051838 | MS.gene06919 | 0.827177 | 1.81E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene06919 | 0.806461 | 8.14E-50 | -1.69E-46 |
| MS.gene051874 | MS.gene06919 | 0.822185 | 2.71E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene06919 | 0.801096 | 1.06E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene06919 | 0.835613 | 1.52E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene06919 | 0.813196 | 2.89E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene06919 | 0.809064 | 2.28E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene06919 | 0.803679 | 3.11E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene06919 | 0.833614 | 4.82E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene06919 | 0.802779 | 4.77E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene06919 | 0.850064 | 2.16E-60 | -1.69E-46 |
| MS.gene052872 | MS.gene06919 | 0.861479 | 9.97E-64 | -1.69E-46 |
| MS.gene052916 | MS.gene06919 | 0.844424 | 7.62E-59 | -1.69E-46 |
| MS.gene053009 | MS.gene06919 | 0.806371 | 8.50E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene06919 | 0.817482 | 3.22E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene06919 | 0.817798 | 2.73E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene06919 | 0.814849 | 1.25E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene06919 | 0.815953 | 7.10E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene06919 | 0.805431 | 1.34E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene06919 | 0.836624 | 8.39E-57 | -1.69E-46 |
| MS.gene053626 | MS.gene06919 | 0.800862 | 1.18E-48 | -1.69E-46 |
| MS.gene053632 | MS.gene06919 | 0.853508 | 2.28E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene06919 | 0.834623 | 2.69E-56 | -1.69E-46 |
| MS.gene053912 | MS.gene06919 | 0.833533 | 5.05E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene06919 | 0.891857 | 2.71E-74 | -1.69E-46 |
| MS.gene054003 | MS.gene06919 | 0.800444 | 1.44E-48 | -1.69E-46 |
| MS.gene054600 | MS.gene06919 | 0.809758 | 1.62E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene06919 | 0.857074 | 2.09E-62 | -1.69E-46 |
| MS.gene054706 | MS.gene06919 | -0.806658 | 7.39E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene06919 | 0.824884 | 6.34E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene06919 | 0.82519 | 5.37E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene06919 | 0.856638 | 2.81E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene06919 | 0.82173 | 3.46E-53 | -1.69E-46 |
| MS.gene055212 | MS.gene06919 | 0.818072 | 2.37E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene06919 | 0.823918 | 1.07E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene06919 | 0.806134 | 9.54E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene06919 | 0.823325 | 1.47E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene06919 | 0.833416 | 5.40E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene06919 | 0.812226 | 4.72E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene06919 | 0.849626 | 2.87E-60 | -1.69E-46 |
| MS.gene055748 | MS.gene06919 | 0.810787 | 9.69E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene06919 | 0.810845 | 9.41E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene06919 | 0.81783 | 2.69E-52 | -1.69E-46 |
| MS.gene055776 | MS.gene06919 | 0.804231 | 2.39E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene06919 | 0.823266 | 1.52E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene06919 | 0.819266 | 1.27E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene06919 | 0.816738 | 4.74E-52 | -1.69E-46 |
| MS.gene056046 | MS.gene06919 | 0.81858 | 1.82E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene06919 | 0.806812 | 6.86E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene06919 | 0.838347 | 3.03E-57 | -1.69E-46 |
| MS.gene056448 | MS.gene06919 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene06919 | 0.874544 | 6.22E-68 | -1.69E-46 |
| MS.gene056504 | MS.gene06919 | 0.833345 | 5.63E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene06919 | 0.804204 | 2.42E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene06919 | 0.824553 | 7.58E-54 | -1.69E-46 |
| MS.gene05664 | MS.gene06919 | 0.802367 | 5.80E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene06919 | 0.863288 | 2.77E-64 | -1.69E-46 |
| MS.gene056692 | MS.gene06919 | 0.80161 | 8.30E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene06919 | 0.8215 | 3.91E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene06919 | 0.865742 | 4.74E-65 | -1.69E-46 |
| MS.gene057086 | MS.gene06919 | 0.801292 | 9.65E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene06919 | 0.805658 | 1.20E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene06919 | 0.811547 | 6.63E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene06919 | 0.837297 | 5.65E-57 | -1.69E-46 |
| MS.gene057856 | MS.gene06919 | 0.814798 | 1.28E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene06919 | 0.830311 | 3.15E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene06919 | 0.864298 | 1.34E-64 | -1.69E-46 |
| MS.gene058338 | MS.gene06919 | 0.815809 | 7.64E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene06919 | 0.856188 | 3.81E-62 | -1.69E-46 |
| MS.gene058459 | MS.gene06919 | 0.821509 | 3.89E-53 | -1.69E-46 |
| MS.gene058723 | MS.gene06919 | 0.859014 | 5.54E-63 | -1.69E-46 |
| MS.gene058773 | MS.gene06919 | 0.819633 | 1.05E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene06919 | 0.836287 | 1.02E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene06919 | 0.819065 | 1.41E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene06919 | 0.808733 | 2.68E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene06919 | 0.877493 | 6.01E-69 | -1.69E-46 |
| MS.gene05934 | MS.gene06919 | 0.806233 | 9.09E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene06919 | 0.813459 | 2.53E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene06919 | 0.803239 | 3.83E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene06919 | 0.825306 | 5.04E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene06919 | 0.83906 | 1.99E-57 | -1.69E-46 |
| MS.gene059699 | MS.gene06919 | -0.815063 | 1.12E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene06919 | -0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene06919 | 0.81549 | 9.00E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene06919 | 0.835538 | 1.58E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene06919 | 0.842229 | 2.94E-58 | -1.69E-46 |
| MS.gene060341 | MS.gene06919 | 0.807301 | 5.41E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene06919 | 0.815689 | 8.13E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene06919 | 0.839825 | 1.26E-57 | -1.69E-46 |
| MS.gene060804 | MS.gene06919 | 0.839225 | 1.80E-57 | -1.69E-46 |
| MS.gene060818 | MS.gene06919 | 0.835541 | 1.58E-56 | -1.69E-46 |
| MS.gene060832 | MS.gene06919 | 0.812284 | 4.58E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene06919 | 0.817955 | 2.52E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene06919 | 0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene06097 | MS.gene06919 | 0.826645 | 2.42E-54 | -1.69E-46 |
| MS.gene060981 | MS.gene06919 | 0.841613 | 4.27E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene06919 | 0.828758 | 7.52E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene06919 | 0.855935 | 4.52E-62 | -1.69E-46 |
| MS.gene061134 | MS.gene06919 | 0.809771 | 1.60E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69259 | MS.gene06919 | PPI |
| MS.gene008088 | MS.gene06919 | PPI |
| MS.gene032008 | MS.gene06919 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06919.t1 | MTR_3g091570 | 92.042 | 666 | 26 | 5 | 1 | 650 | 1 | 655 | 0.0 | 1246 |
| MS.gene06919.t1 | MTR_3g091570 | 98.326 | 478 | 8 | 0 | 173 | 650 | 1 | 478 | 0.0 | 990 |
| MS.gene06919.t1 | MTR_6g012380 | 48.728 | 511 | 228 | 8 | 137 | 640 | 268 | 751 | 9.35e-159 | 475 |
| MS.gene06919.t1 | MTR_8g024340 | 40.338 | 533 | 270 | 15 | 129 | 640 | 83 | 588 | 2.97e-111 | 348 |
| MS.gene06919.t1 | MTR_1g078000 | 39.885 | 524 | 269 | 13 | 137 | 640 | 83 | 580 | 6.84e-106 | 333 |
| MS.gene06919.t1 | MTR_4g094595 | 31.631 | 509 | 314 | 13 | 138 | 639 | 493 | 974 | 4.41e-62 | 223 |
| MS.gene06919.t1 | MTR_2g023320 | 31.262 | 515 | 270 | 18 | 137 | 639 | 475 | 917 | 1.52e-50 | 189 |
| MS.gene06919.t1 | MTR_2g023320 | 31.068 | 515 | 271 | 18 | 137 | 639 | 659 | 1101 | 2.33e-50 | 189 |
| MS.gene06919.t1 | MTR_5g030600 | 23.946 | 522 | 313 | 18 | 137 | 630 | 192 | 657 | 8.44e-26 | 113 |
| MS.gene06919.t1 | MTR_7g037650 | 26.066 | 211 | 121 | 6 | 349 | 554 | 49 | 229 | 3.51e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06919.t1 | AT5G24300 | 69.884 | 601 | 154 | 6 | 71 | 650 | 57 | 651 | 0.0 | 867 |
| MS.gene06919.t1 | AT5G24300 | 69.884 | 601 | 154 | 6 | 71 | 650 | 57 | 651 | 0.0 | 867 |
| MS.gene06919.t1 | AT3G01180 | 47.541 | 549 | 248 | 10 | 102 | 640 | 267 | 785 | 8.68e-166 | 494 |
| MS.gene06919.t1 | AT1G32900 | 39.962 | 523 | 270 | 13 | 137 | 640 | 85 | 582 | 3.91e-103 | 327 |
| MS.gene06919.t1 | AT4G18240 | 33.006 | 509 | 307 | 13 | 138 | 639 | 544 | 1025 | 1.29e-66 | 236 |
| MS.gene06919.t1 | AT1G11720 | 31.189 | 513 | 272 | 17 | 137 | 639 | 647 | 1088 | 1.25e-52 | 196 |
| MS.gene06919.t1 | AT1G11720 | 31.395 | 516 | 267 | 18 | 137 | 639 | 595 | 1036 | 1.38e-52 | 196 |
Find 187 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTACATATAGCAATT+TGG | 0.127091 | 3.1:+73525555 | MS.gene06919:CDS |
| GCCACCTTGCGTTCTATTTC+CGG | 0.159502 | 3.1:+73521109 | MS.gene06919:CDS |
| TATTCTGCTGACGACCTTTC+TGG | 0.160892 | 3.1:+73526935 | MS.gene06919:CDS |
| CAGAAACTCAAGGGAATTTA+AGG | 0.192171 | 3.1:+73522528 | MS.gene06919:CDS |
| TCCAGAGAGATTGACGATTT+TGG | 0.194928 | 3.1:+73521211 | MS.gene06919:CDS |
| CGCTTGACTCCTCATGATTC+TGG | 0.202062 | 3.1:+73521250 | MS.gene06919:CDS |
| GAATCAAGTCAATACCTTTC+TGG | 0.244261 | 3.1:-73527206 | None:intergenic |
| GCAATTACATATAGCAATTT+GGG | 0.248798 | 3.1:+73525556 | MS.gene06919:CDS |
| AACAATGTTGCGAGTTACTA+TGG | 0.270513 | 3.1:-73522606 | None:intergenic |
| AGACAAGCACGGGACGTTTA+AGG | 0.276845 | 3.1:+73523061 | MS.gene06919:CDS |
| TCATATCTGCTTTCAGCAAT+AGG | 0.289960 | 3.1:-73528987 | None:intergenic |
| CCAAAGCAAAATACATTGAT+AGG | 0.294870 | 3.1:-73522803 | None:intergenic |
| GTAGGTTTCTTGAGCTTAGA+AGG | 0.299063 | 3.1:-73521079 | None:intergenic |
| CTCACGATTCTTACCGCAAT+TGG | 0.320425 | 3.1:+73521051 | MS.gene06919:CDS |
| CATAAGGATTCCCTGGTCTA+TGG | 0.321028 | 3.1:-73523037 | None:intergenic |
| GATACTGTATTGCAGACTTT+TGG | 0.333460 | 3.1:+73523612 | MS.gene06919:intron |
| CCTCCCAATGGAAGCACTAA+TGG | 0.338684 | 3.1:-73523228 | None:intergenic |
| TGGGATGGGTATTCCCTACT+TGG | 0.338774 | 3.1:+73525605 | MS.gene06919:CDS |
| CATAGACCAGGGAATCCTTA+TGG | 0.351574 | 3.1:+73523038 | MS.gene06919:CDS |
| CTCCCAATGGAAGCACTAAT+GGG | 0.365771 | 3.1:-73523227 | None:intergenic |
| ATACCAGTAGTTCATGAAAC+AGG | 0.367040 | 3.1:+73528212 | MS.gene06919:CDS |
| ATTGCCTTGCAGAAGGAGTT+AGG | 0.367443 | 3.1:+73527056 | MS.gene06919:CDS |
| AATCATTGAGTGGGCATTCA+TGG | 0.370383 | 3.1:+73528958 | MS.gene06919:CDS |
| TCTTCTGCATTCCCAATCTC+TGG | 0.372149 | 3.1:-73522569 | None:intergenic |
| TAAAGATAAATTTCGTGGTT+GGG | 0.379084 | 3.1:+73527926 | MS.gene06919:CDS |
| CATATCTGCTTTCAGCAATA+GGG | 0.379828 | 3.1:-73528986 | None:intergenic |
| GCCTATTCCTCGTTAATGAT+TGG | 0.380274 | 3.1:+73523271 | MS.gene06919:CDS |
| TCGTCCACATGGGGTATATA+AGG | 0.386432 | 3.1:+73523645 | MS.gene06919:CDS |
| CAGTTGTATGCAATGAGATA+TGG | 0.386711 | 3.1:+73528185 | MS.gene06919:CDS |
| CATATCTCATTGCATACAAC+TGG | 0.389447 | 3.1:-73528184 | None:intergenic |
| CCGCGACCCGCCAGTGCTAT+TGG | 0.397516 | 3.1:-73522695 | None:intergenic |
| TGATCATCTTCAAAGGAAAT+AGG | 0.398543 | 3.1:-73521169 | None:intergenic |
| GCAGTTATTCTATGAGATAC+TGG | 0.400477 | 3.1:-73527963 | None:intergenic |
| GCCTTCAGCATTGCATCCTT+CGG | 0.400496 | 3.1:-73528369 | None:intergenic |
| ACAACTACAGAAGGTGGATT+TGG | 0.400949 | 3.1:+73526161 | MS.gene06919:CDS |
| ACCAAAATCGTCAATCTCTC+TGG | 0.401513 | 3.1:-73521212 | None:intergenic |
| TGCATACACTGAAACTAAAC+TGG | 0.401674 | 3.1:-73523298 | None:intergenic |
| CTCATCCAGTCTTCATATAT+AGG | 0.407433 | 3.1:-73527885 | None:intergenic |
| GCATCTCTTCCTCCAGCAAA+TGG | 0.410114 | 3.1:-73528347 | None:intergenic |
| TTTCAGGTAATGCTTGGTTC+GGG | 0.416000 | 3.1:+73527858 | MS.gene06919:intron |
| AAATTGCTATATGTAATTGC+AGG | 0.420448 | 3.1:-73525553 | None:intergenic |
| ATAATGAACACAAGTCTTCA+TGG | 0.432708 | 3.1:+73528867 | MS.gene06919:CDS |
| TCAAGAATGGTATGGAGCGC+TGG | 0.437281 | 3.1:+73525585 | MS.gene06919:CDS |
| CCATTGGGAGGGTTCACTTA+CGG | 0.438789 | 3.1:+73523240 | MS.gene06919:CDS |
| CGGGACGTTTAAGGATAATC+AGG | 0.439356 | 3.1:+73523070 | MS.gene06919:CDS |
| CTGAAGAAGTGCGGGTATGA+TGG | 0.440710 | 3.1:-73520997 | None:intergenic |
| ATTCTGCTGACGACCTTTCT+GGG | 0.441080 | 3.1:+73526936 | MS.gene06919:CDS |
| GAACTCACCACTGGACAATC+AGG | 0.442879 | 3.1:-73527092 | None:intergenic |
| GCCAATCATTAACGAGGAAT+AGG | 0.443305 | 3.1:-73523272 | None:intergenic |
| CTTTATAAAGATAAATTTCG+TGG | 0.443734 | 3.1:+73527921 | MS.gene06919:CDS |
| GGTGGCCTTGCAGATGTTTG+TGG | 0.444403 | 3.1:+73522665 | MS.gene06919:CDS |
| ATAGGTCCGTCTGGTGAAGC+AGG | 0.444784 | 3.1:-73521151 | None:intergenic |
| GGGTCGCGGACACCGTGTTA+TGG | 0.449119 | 3.1:+73522709 | MS.gene06919:CDS |
| GATAAATTTCGTGGTTGGGT+TGG | 0.449687 | 3.1:+73527930 | MS.gene06919:CDS |
| GTGTTCATTATATGTTTGAA+TGG | 0.457516 | 3.1:-73528855 | None:intergenic |
| ATAAAGATAAATTTCGTGGT+TGG | 0.461080 | 3.1:+73527925 | MS.gene06919:CDS |
| AAGGTCGTCAGCAGAATAGT+TGG | 0.464673 | 3.1:-73526930 | None:intergenic |
| TGGTTCCTTGCCAATAGCAC+TGG | 0.466231 | 3.1:+73522685 | MS.gene06919:CDS |
| GCAGTACCATGTACGTATCT+AGG | 0.472827 | 3.1:-73522740 | None:intergenic |
| GCAATATGTTCATCAGATGA+TGG | 0.474624 | 3.1:-73526905 | None:intergenic |
| CACCCTTCATTCCATAGACC+AGG | 0.479990 | 3.1:+73523026 | MS.gene06919:CDS |
| AGAAGGTGGATTTGGTCTAC+AGG | 0.480693 | 3.1:+73526169 | MS.gene06919:CDS |
| CCACAAGGCTCAAATGTTGA+TGG | 0.486246 | 3.1:-73528155 | None:intergenic |
| CAAAGCAAAATACATTGATA+GGG | 0.488034 | 3.1:-73522802 | None:intergenic |
| GGATGCAATGCTGAAGGCAC+GGG | 0.488330 | 3.1:+73528374 | MS.gene06919:CDS |
| TTCTGTAGTTGTTATCTCCC+AGG | 0.489591 | 3.1:-73526150 | None:intergenic |
| TGCTGACGACCTTTCTGGGA+AGG | 0.490242 | 3.1:+73526940 | MS.gene06919:CDS |
| CAACACCTTCTCTATACTCA+TGG | 0.490842 | 3.1:-73522850 | None:intergenic |
| TTCCCTGGTCTATGGAATGA+AGG | 0.492921 | 3.1:-73523029 | None:intergenic |
| AGTATAGAGAAGGTGTTGAC+TGG | 0.493004 | 3.1:+73522855 | MS.gene06919:CDS |
| AACTTGTAGATTGGATTCGT+TGG | 0.494340 | 3.1:+73527171 | MS.gene06919:intron |
| GCCCCATTAGTGCTTCCATT+GGG | 0.495903 | 3.1:+73523225 | MS.gene06919:CDS |
| TTGTCTCCATAAGGATTCCC+TGG | 0.496184 | 3.1:-73523044 | None:intergenic |
| CATTAGTGCTTCCATTGGGA+GGG | 0.499927 | 3.1:+73523229 | MS.gene06919:CDS |
| CCATTAGTGCTTCCATTGGG+AGG | 0.501841 | 3.1:+73523228 | MS.gene06919:CDS |
| TTTGAAGATGATCAAGATAG+AGG | 0.504728 | 3.1:+73521178 | MS.gene06919:CDS |
| TGGGGCTTCACATGCTGCAT+GGG | 0.506777 | 3.1:-73523208 | None:intergenic |
| CCAATAGCACTGGCGGGTCG+CGG | 0.510913 | 3.1:+73522695 | MS.gene06919:CDS |
| GAAATCCTATATATGAAGAC+TGG | 0.512634 | 3.1:+73527880 | MS.gene06919:CDS |
| GGAAGACTTGATTACCAGAA+AGG | 0.515076 | 3.1:+73527192 | MS.gene06919:CDS |
| GTCCCGTGCTTGTCTCCATA+AGG | 0.516878 | 3.1:-73523053 | None:intergenic |
| GACAAAGGAGAGCATGTTAG+TGG | 0.517549 | 3.1:+73528603 | MS.gene06919:CDS |
| TCAAAGGAAATAGGTCCGTC+TGG | 0.521679 | 3.1:-73521160 | None:intergenic |
| TTTGGAGGCGCTCAAGAAGT+TGG | 0.523145 | 3.1:+73522821 | MS.gene06919:CDS |
| TTGGTATGAGAAGGTCGAGT+TGG | 0.523148 | 3.1:-73521022 | None:intergenic |
| ACATCGTCTTGCATAAGCTC+TGG | 0.524359 | 3.1:-73527240 | None:intergenic |
| GGAAGCACCGTCAGTGTCAC+CGG | 0.524701 | 3.1:-73521128 | None:intergenic |
| GAGAGATTACACCTGGGAAA+AGG | 0.525113 | 3.1:+73528916 | MS.gene06919:CDS |
| CAAAATCAACCTTCCCAGAA+AGG | 0.526917 | 3.1:-73526949 | None:intergenic |
| TGGAATTGATGTTACTGAAT+GGG | 0.528155 | 3.1:+73526880 | MS.gene06919:CDS |
| ATGGGGCTTCACATGCTGCA+TGG | 0.529447 | 3.1:-73523209 | None:intergenic |
| ATGGAATTGATGTTACTGAA+TGG | 0.529859 | 3.1:+73526879 | MS.gene06919:CDS |
| TATCGACTAGGGATCACAAA+TGG | 0.530293 | 3.1:+73526860 | MS.gene06919:intron |
| AGGTATTGACTTGATTCGCC+AGG | 0.532994 | 3.1:+73527212 | MS.gene06919:CDS |
| GCTTCCCCTGCTTCACCAGA+CGG | 0.535866 | 3.1:+73521145 | MS.gene06919:CDS |
| GTATCTCATAGAATAACTGC+AGG | 0.537384 | 3.1:+73527966 | MS.gene06919:CDS |
| AGCCCCATTAGTGCTTCCAT+TGG | 0.538320 | 3.1:+73523224 | MS.gene06919:CDS |
| AGGCCACCAGTCTTAGAATA+CGG | 0.539910 | 3.1:-73522650 | None:intergenic |
| CATGTGTCCTCGCCCAAGTA+GGG | 0.540027 | 3.1:-73525618 | None:intergenic |
| AATGGTATGGAGCGCTGGGA+TGG | 0.541131 | 3.1:+73525590 | MS.gene06919:CDS |
| GCATAAGCTCTGGAATTGCC+TGG | 0.541731 | 3.1:-73527230 | None:intergenic |
| TTCCTTGCCAATAGCACTGG+CGG | 0.544415 | 3.1:+73522688 | MS.gene06919:CDS |
| ATTTGGGGCTGCCTCAAGAA+TGG | 0.545045 | 3.1:+73525572 | MS.gene06919:CDS |
| GCATGTGTCCTCGCCCAAGT+AGG | 0.545911 | 3.1:-73525619 | None:intergenic |
| CAAGAATGGTATGGAGCGCT+GGG | 0.546441 | 3.1:+73525586 | MS.gene06919:CDS |
| AGGATGCAATGCTGAAGGCA+CGG | 0.547103 | 3.1:+73528373 | MS.gene06919:CDS |
| ATGGTATGGAGCGCTGGGAT+GGG | 0.548093 | 3.1:+73525591 | MS.gene06919:CDS |
| CCATCAACATTTGAGCCTTG+TGG | 0.553290 | 3.1:+73528155 | MS.gene06919:CDS |
| GCATCAAAGTATCGTCCACA+TGG | 0.557906 | 3.1:+73523634 | MS.gene06919:CDS |
| GCTGCACCGTATTCTAAGAC+TGG | 0.565136 | 3.1:+73522644 | MS.gene06919:CDS |
| ATCCTTATGGAGACAAGCAC+GGG | 0.566822 | 3.1:+73523051 | MS.gene06919:CDS |
| TCCTTGCCAATAGCACTGGC+GGG | 0.566924 | 3.1:+73522689 | MS.gene06919:CDS |
| TGGGAATGCAGAAGATGAGA+AGG | 0.567156 | 3.1:+73522577 | MS.gene06919:CDS |
| ATGTAAAATTGCCTTGCAGA+AGG | 0.568730 | 3.1:+73527049 | MS.gene06919:CDS |
| AGTTGGAGCTGAAGAAGTGC+GGG | 0.569588 | 3.1:-73521005 | None:intergenic |
| TCTATCTTGATCATCTTCAA+AGG | 0.574748 | 3.1:-73521176 | None:intergenic |
| GCGCCATTGTTACTGCTGAT+CGG | 0.576090 | 3.1:+73525677 | MS.gene06919:CDS |
| TAGGTTTCTTGAGCTTAGAA+GGG | 0.578297 | 3.1:-73521078 | None:intergenic |
| GTATGACGAGAGATTACACC+TGG | 0.578921 | 3.1:+73528909 | MS.gene06919:CDS |
| ACTGGACAATCAGGTCGCAC+TGG | 0.579346 | 3.1:-73527083 | None:intergenic |
| AGGACACATGCTCTTGACAC+AGG | 0.582246 | 3.1:+73525631 | MS.gene06919:CDS |
| TAAGAATCGTGAGGAACAGT+TGG | 0.584842 | 3.1:-73521041 | None:intergenic |
| TCCCTGGTCTATGGAATGAA+GGG | 0.587551 | 3.1:-73523028 | None:intergenic |
| TAATGAACACAAGTCTTCAT+GGG | 0.588417 | 3.1:+73528868 | MS.gene06919:CDS |
| ACCCGCCAGTGCTATTGGCA+AGG | 0.588595 | 3.1:-73522690 | None:intergenic |
| GAACACAAGTCTTCATGGGA+GGG | 0.590428 | 3.1:+73528872 | MS.gene06919:CDS |
| GATTCACAATATTGCACACC+AGG | 0.590518 | 3.1:+73523687 | MS.gene06919:CDS |
| ATTCCCTTGAGTTTCTGCAG+TGG | 0.593811 | 3.1:-73522522 | None:intergenic |
| GAGGAACAGTTGGTATGAGA+AGG | 0.594475 | 3.1:-73521031 | None:intergenic |
| TAGGTCCGTCTGGTGAAGCA+GGG | 0.596649 | 3.1:-73521150 | None:intergenic |
| CAATATGTTCATCAGATGAT+GGG | 0.596741 | 3.1:-73526904 | None:intergenic |
| GGGCTGCCTCAAGAATGGTA+TGG | 0.598454 | 3.1:+73525577 | MS.gene06919:CDS |
| AATCCTTATGGAGACAAGCA+CGG | 0.600419 | 3.1:+73523050 | MS.gene06919:CDS |
| TCTATTTCCGGTGACACTGA+CGG | 0.601830 | 3.1:+73521121 | MS.gene06919:CDS |
| GGGTATTCCCTACTTGGGCG+AGG | 0.603588 | 3.1:+73525611 | MS.gene06919:CDS |
| CCGTAAGTGAACCCTCCCAA+TGG | 0.604219 | 3.1:-73523240 | None:intergenic |
| ATCTGCTTTCAGCAATAGGG+TGG | 0.605343 | 3.1:-73528983 | None:intergenic |
| GCCGAAGGATGCAATGCTGA+AGG | 0.605754 | 3.1:+73528368 | MS.gene06919:CDS |
| AAAGCAAAATACATTGATAG+GGG | 0.606682 | 3.1:-73522801 | None:intergenic |
| GAGACCACTGCAGAAACTCA+AGG | 0.606966 | 3.1:+73522518 | MS.gene06919:intron |
| TACCAGTAGTTCATGAAACA+GGG | 0.607738 | 3.1:+73528213 | MS.gene06919:CDS |
| AATGATTTGCTCGTATTGAG+CGG | 0.611048 | 3.1:-73528942 | None:intergenic |
| ATACGAGCAAATCATTGAGT+GGG | 0.612574 | 3.1:+73528949 | MS.gene06919:CDS |
| GAGATAACAACTACAGAAGG+TGG | 0.613804 | 3.1:+73526155 | MS.gene06919:CDS |
| GTCACCGGAAATAGAACGCA+AGG | 0.614436 | 3.1:-73521113 | None:intergenic |
| AATACGAGCAAATCATTGAG+TGG | 0.616706 | 3.1:+73528948 | MS.gene06919:CDS |
| CAATTACATATAGCAATTTG+GGG | 0.620521 | 3.1:+73525557 | MS.gene06919:CDS |
| CATCAAAGTATCGTCCACAT+GGG | 0.622300 | 3.1:+73523635 | MS.gene06919:CDS |
| TCGGATAGTAACAGTAAGCA+AGG | 0.627715 | 3.1:+73525696 | MS.gene06919:CDS |
| GGGATGGGTATTCCCTACTT+GGG | 0.627869 | 3.1:+73525606 | MS.gene06919:CDS |
| AGACCACTGCAGAAACTCAA+GGG | 0.631842 | 3.1:+73522519 | MS.gene06919:CDS |
| AACATGCTCTCCTTTGTCAG+TGG | 0.633844 | 3.1:-73528598 | None:intergenic |
| TATCCGATCAGCAGTAACAA+TGG | 0.634823 | 3.1:-73525680 | None:intergenic |
| GAGTTGGAGCTGAAGAAGTG+CGG | 0.635111 | 3.1:-73521006 | None:intergenic |
| TGGGAGATAACAACTACAGA+AGG | 0.635680 | 3.1:+73526152 | MS.gene06919:CDS |
| ATCTCTCCTAGATACGTACA+TGG | 0.636965 | 3.1:+73522734 | MS.gene06919:CDS |
| AGGTCCGTCTGGTGAAGCAG+GGG | 0.637766 | 3.1:-73521149 | None:intergenic |
| AGCGCTCCATACCATTCTTG+AGG | 0.642449 | 3.1:-73525583 | None:intergenic |
| GTATAGAGAAGGTGTTGACT+GGG | 0.646125 | 3.1:+73522856 | MS.gene06919:CDS |
| TACAACTGGTTTAGTCCACA+AGG | 0.649431 | 3.1:-73528170 | None:intergenic |
| TGAACACAAGTCTTCATGGG+AGG | 0.650187 | 3.1:+73528871 | MS.gene06919:CDS |
| ATCATGAGGAGTCAAGCGAA+AGG | 0.653378 | 3.1:-73521245 | None:intergenic |
| TCCCAATGGAAGCACTAATG+GGG | 0.663095 | 3.1:-73523226 | None:intergenic |
| GCTGGAGGAAGAGATGCCGA+AGG | 0.665363 | 3.1:+73528353 | MS.gene06919:CDS |
| GCACCGTATTCTAAGACTGG+TGG | 0.666033 | 3.1:+73522647 | MS.gene06919:CDS |
| AAGACCTAACTCCTTCTGCA+AGG | 0.666845 | 3.1:-73527060 | None:intergenic |
| AGATAGATACCAGAATCATG+AGG | 0.666968 | 3.1:-73521259 | None:intergenic |
| GATTTGCTCGTATTGAGCGG+CGG | 0.669443 | 3.1:-73528939 | None:intergenic |
| ACCCTTCATTCCATAGACCA+GGG | 0.674753 | 3.1:+73523027 | MS.gene06919:CDS |
| AGGAACCACAAACATCTGCA+AGG | 0.675664 | 3.1:-73522670 | None:intergenic |
| ACTAGAAAACTTACTATCAG+CGG | 0.677717 | 3.1:-73522762 | None:intergenic |
| ATCAAAGTATCGTCCACATG+GGG | 0.678467 | 3.1:+73523636 | MS.gene06919:CDS |
| ACCAGTAGTTCATGAAACAG+GGG | 0.682127 | 3.1:+73528214 | MS.gene06919:CDS |
| TTAGAAGGGAAAGCCAATTG+CGG | 0.684978 | 3.1:-73521064 | None:intergenic |
| GTATGATGGAGAAAGAGACG+AGG | 0.689249 | 3.1:-73520983 | None:intergenic |
| TATGATGGAGAAAGAGACGA+GGG | 0.695047 | 3.1:-73520982 | None:intergenic |
| GCATCCTTATATACCCCATG+TGG | 0.695337 | 3.1:-73523649 | None:intergenic |
| GATGCAATGCTGAAGGCACG+GGG | 0.696578 | 3.1:+73528375 | MS.gene06919:CDS |
| TATCTCATAGAATAACTGCA+GGG | 0.703392 | 3.1:+73527967 | MS.gene06919:CDS |
| CCAGTAGTTCATGAAACAGG+GGG | 0.705069 | 3.1:+73528215 | MS.gene06919:CDS |
| ACCGGAAATAGAACGCAAGG+TGG | 0.720708 | 3.1:-73521110 | None:intergenic |
| AGTGCGACCTGATTGTCCAG+TGG | 0.724308 | 3.1:+73527085 | MS.gene06919:CDS |
| TGGCATGCCAATCATTAACG+AGG | 0.731653 | 3.1:-73523278 | None:intergenic |
| TAGGAGAGATAACCATAACA+CGG | 0.743995 | 3.1:-73522721 | None:intergenic |
| CAATTGCGGTAAGAATCGTG+AGG | 0.746620 | 3.1:-73521050 | None:intergenic |
| TATGACGAGAGATTACACCT+GGG | 0.773744 | 3.1:+73528910 | MS.gene06919:CDS |
| GATAGAAAGAGTATTCTGAG+CGG | 0.785538 | 3.1:+73526203 | MS.gene06919:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 73520965 | 73528997 | 73520965 | ID=MS.gene06919 |
| chr3.1 | mRNA | 73520965 | 73528997 | 73520965 | ID=MS.gene06919.t1;Parent=MS.gene06919 |
| chr3.1 | exon | 73520965 | 73521271 | 73520965 | ID=MS.gene06919.t1.exon1;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73520965 | 73521271 | 73520965 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73522519 | 73522877 | 73522519 | ID=MS.gene06919.t1.exon2;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73522519 | 73522877 | 73522519 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73523014 | 73523091 | 73523014 | ID=MS.gene06919.t1.exon3;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73523014 | 73523091 | 73523014 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73523189 | 73523313 | 73523189 | ID=MS.gene06919.t1.exon4;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73523189 | 73523313 | 73523189 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73523627 | 73523708 | 73523627 | ID=MS.gene06919.t1.exon5;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73523627 | 73523708 | 73523627 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73525544 | 73525717 | 73525544 | ID=MS.gene06919.t1.exon6;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73525544 | 73525717 | 73525544 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73526143 | 73526224 | 73526143 | ID=MS.gene06919.t1.exon7;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73526143 | 73526224 | 73526143 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73526870 | 73526961 | 73526870 | ID=MS.gene06919.t1.exon8;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73526870 | 73526961 | 73526870 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73527044 | 73527106 | 73527044 | ID=MS.gene06919.t1.exon9;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73527044 | 73527106 | 73527044 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73527180 | 73527269 | 73527180 | ID=MS.gene06919.t1.exon10;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73527180 | 73527269 | 73527180 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73527864 | 73527988 | 73527864 | ID=MS.gene06919.t1.exon11;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73527864 | 73527988 | 73527864 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73528136 | 73528244 | 73528136 | ID=MS.gene06919.t1.exon12;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73528136 | 73528244 | 73528136 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73528326 | 73528396 | 73528326 | ID=MS.gene06919.t1.exon13;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73528326 | 73528396 | 73528326 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73528585 | 73528624 | 73528585 | ID=MS.gene06919.t1.exon14;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73528585 | 73528624 | 73528585 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| chr3.1 | exon | 73528842 | 73528997 | 73528842 | ID=MS.gene06919.t1.exon15;Parent=MS.gene06919.t1 |
| chr3.1 | CDS | 73528842 | 73528997 | 73528842 | ID=cds.MS.gene06919.t1;Parent=MS.gene06919.t1 |
| Gene Sequence |
| Protein sequence |
