Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20602.t1 | XP_013450890.1 | 97.9 | 145 | 2 | 1 | 1 | 145 | 1 | 144 | 3.50E-75 | 290.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20602.t1 | O49856 | 86.9 | 145 | 18 | 1 | 1 | 145 | 1 | 144 | 1.4e-69 | 263.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20602.t1 | A0A072U5B9 | 97.9 | 145 | 2 | 1 | 1 | 145 | 1 | 144 | 2.5e-75 | 290.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene20602 | 0.900887 | 4.67E-78 | -1.69E-46 |
| MS.gene049173 | MS.gene20602 | 0.803259 | 3.80E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene20602 | 0.805468 | 1.32E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene20602 | 0.866015 | 3.88E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene20602 | 0.82699 | 2.00E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene20602 | 0.883408 | 4.60E-71 | -1.69E-46 |
| MS.gene049320 | MS.gene20602 | 0.897645 | 1.15E-76 | -1.69E-46 |
| MS.gene049609 | MS.gene20602 | 0.812182 | 4.82E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene20602 | 0.842209 | 2.97E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene20602 | 0.852592 | 4.17E-61 | -1.69E-46 |
| MS.gene050163 | MS.gene20602 | 0.864309 | 1.33E-64 | -1.69E-46 |
| MS.gene050165 | MS.gene20602 | 0.871158 | 8.46E-67 | -1.69E-46 |
| MS.gene050170 | MS.gene20602 | 0.854612 | 1.10E-61 | -1.69E-46 |
| MS.gene050322 | MS.gene20602 | -0.817809 | 2.72E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene20602 | 0.853356 | 2.52E-61 | -1.69E-46 |
| MS.gene050333 | MS.gene20602 | 0.838783 | 2.34E-57 | -1.69E-46 |
| MS.gene050338 | MS.gene20602 | -0.804692 | 1.91E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene20602 | 0.806526 | 7.88E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene20602 | 0.858873 | 6.11E-63 | -1.69E-46 |
| MS.gene050504 | MS.gene20602 | 0.900674 | 5.78E-78 | -1.69E-46 |
| MS.gene050518 | MS.gene20602 | 0.898116 | 7.27E-77 | -1.69E-46 |
| MS.gene050577 | MS.gene20602 | 0.894803 | 1.75E-75 | -1.69E-46 |
| MS.gene050612 | MS.gene20602 | 0.912443 | 1.94E-83 | -1.69E-46 |
| MS.gene050675 | MS.gene20602 | 0.861531 | 9.61E-64 | -1.69E-46 |
| MS.gene050699 | MS.gene20602 | 0.897601 | 1.20E-76 | -1.69E-46 |
| MS.gene050747 | MS.gene20602 | 0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene050772 | MS.gene20602 | 0.833052 | 6.66E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene20602 | 0.833956 | 3.96E-56 | -1.69E-46 |
| MS.gene050832 | MS.gene20602 | -0.808347 | 3.24E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene20602 | 0.835852 | 1.32E-56 | -1.69E-46 |
| MS.gene050871 | MS.gene20602 | 0.830568 | 2.73E-55 | -1.69E-46 |
| MS.gene050876 | MS.gene20602 | 0.816791 | 4.61E-52 | -1.69E-46 |
| MS.gene050883 | MS.gene20602 | -0.81076 | 9.82E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene20602 | 0.83791 | 3.93E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene20602 | 0.880654 | 4.59E-70 | -1.69E-46 |
| MS.gene05100 | MS.gene20602 | 0.845811 | 3.22E-59 | -1.69E-46 |
| MS.gene051127 | MS.gene20602 | -0.800911 | 1.15E-48 | -1.69E-46 |
| MS.gene051317 | MS.gene20602 | 0.878355 | 3.00E-69 | -1.69E-46 |
| MS.gene051364 | MS.gene20602 | -0.811455 | 6.94E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene20602 | -0.808773 | 2.63E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene20602 | 0.865871 | 4.31E-65 | -1.69E-46 |
| MS.gene051651 | MS.gene20602 | -0.819461 | 1.15E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene20602 | 0.839824 | 1.26E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene20602 | 0.836308 | 1.01E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene20602 | 0.819482 | 1.13E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene20602 | 0.857227 | 1.88E-62 | -1.69E-46 |
| MS.gene052486 | MS.gene20602 | 0.847579 | 1.06E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene20602 | 0.830619 | 2.65E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene20602 | 0.809182 | 2.15E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene20602 | 0.820277 | 7.47E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene20602 | 0.833673 | 4.66E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene20602 | 0.829027 | 6.48E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene20602 | 0.804603 | 2.00E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene20602 | 0.845695 | 3.46E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene20602 | 0.842824 | 2.04E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene20602 | 0.848716 | 5.13E-60 | -1.69E-46 |
| MS.gene053436 | MS.gene20602 | 0.80389 | 2.81E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene20602 | 0.818317 | 2.09E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene20602 | 0.800775 | 1.23E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene20602 | 0.811582 | 6.51E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene20602 | 0.821346 | 4.24E-53 | -1.69E-46 |
| MS.gene054374 | MS.gene20602 | 0.810177 | 1.31E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene20602 | 0.828546 | 8.47E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene20602 | 0.840337 | 9.24E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene20602 | 0.868271 | 7.39E-66 | -1.69E-46 |
| MS.gene05470 | MS.gene20602 | 0.899473 | 1.91E-77 | -1.69E-46 |
| MS.gene054954 | MS.gene20602 | 0.90335 | 3.80E-79 | -1.69E-46 |
| MS.gene055154 | MS.gene20602 | -0.804677 | 1.93E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene20602 | 0.803662 | 3.13E-49 | -1.69E-46 |
| MS.gene055251 | MS.gene20602 | -0.851597 | 8.00E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene20602 | 0.894281 | 2.86E-75 | -1.69E-46 |
| MS.gene055502 | MS.gene20602 | 0.883074 | 6.10E-71 | -1.69E-46 |
| MS.gene055577 | MS.gene20602 | 0.853717 | 1.99E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene20602 | 0.891708 | 3.10E-74 | -1.69E-46 |
| MS.gene055750 | MS.gene20602 | 0.860008 | 2.79E-63 | -1.69E-46 |
| MS.gene055751 | MS.gene20602 | 0.896742 | 2.75E-76 | -1.69E-46 |
| MS.gene055776 | MS.gene20602 | 0.895226 | 1.17E-75 | -1.69E-46 |
| MS.gene055849 | MS.gene20602 | 0.834065 | 3.72E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene20602 | 0.876493 | 1.34E-68 | -1.69E-46 |
| MS.gene055942 | MS.gene20602 | -0.810252 | 1.26E-50 | -1.69E-46 |
| MS.gene055956 | MS.gene20602 | -0.815855 | 7.47E-52 | -1.69E-46 |
| MS.gene056046 | MS.gene20602 | 0.801253 | 9.82E-49 | -1.69E-46 |
| MS.gene056266 | MS.gene20602 | 0.804108 | 2.53E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene20602 | 0.828172 | 1.04E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene20602 | 0.899531 | 1.81E-77 | -1.69E-46 |
| MS.gene056510 | MS.gene20602 | 0.873499 | 1.40E-67 | -1.69E-46 |
| MS.gene056550 | MS.gene20602 | -0.811219 | 7.81E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene20602 | 0.881945 | 1.57E-70 | -1.69E-46 |
| MS.gene056692 | MS.gene20602 | 0.856043 | 4.20E-62 | -1.69E-46 |
| MS.gene057246 | MS.gene20602 | 0.800387 | 1.48E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene20602 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene057606 | MS.gene20602 | -0.807876 | 4.08E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene20602 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene20602 | 0.844786 | 6.09E-59 | -1.69E-46 |
| MS.gene058111 | MS.gene20602 | -0.824628 | 7.28E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene20602 | -0.867965 | 9.27E-66 | -1.69E-46 |
| MS.gene05837 | MS.gene20602 | 0.812614 | 3.88E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene20602 | 0.898289 | 6.14E-77 | -1.69E-46 |
| MS.gene058544 | MS.gene20602 | 0.874522 | 6.33E-68 | -1.69E-46 |
| MS.gene058719 | MS.gene20602 | 0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene20602 | 0.832947 | 7.07E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene20602 | 0.855273 | 7.05E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene20602 | 0.839097 | 1.94E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene20602 | 0.89718 | 1.80E-76 | -1.69E-46 |
| MS.gene059023 | MS.gene20602 | 0.854927 | 8.88E-62 | -1.69E-46 |
| MS.gene05912 | MS.gene20602 | 0.804239 | 2.38E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene20602 | 0.839356 | 1.66E-57 | -1.69E-46 |
| MS.gene059667 | MS.gene20602 | 0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene20602 | 0.904255 | 1.49E-79 | -1.69E-46 |
| MS.gene059718 | MS.gene20602 | 0.849863 | 2.46E-60 | -1.69E-46 |
| MS.gene059756 | MS.gene20602 | 0.851172 | 1.05E-60 | -1.69E-46 |
| MS.gene059770 | MS.gene20602 | -0.823261 | 1.52E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene20602 | 0.83192 | 1.27E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene20602 | 0.898005 | 8.10E-77 | -1.69E-46 |
| MS.gene06000 | MS.gene20602 | 0.814591 | 1.42E-51 | -1.69E-46 |
| MS.gene060337 | MS.gene20602 | -0.805098 | 1.57E-49 | -1.69E-46 |
| MS.gene060694 | MS.gene20602 | -0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene20602 | 0.865144 | 7.31E-65 | -1.69E-46 |
| MS.gene060762 | MS.gene20602 | 0.87185 | 4.99E-67 | -1.69E-46 |
| MS.gene060778 | MS.gene20602 | 0.818063 | 2.38E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene20602 | 0.883163 | 5.66E-71 | -1.69E-46 |
| MS.gene060823 | MS.gene20602 | -0.835026 | 2.13E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene20602 | 0.810283 | 1.24E-50 | -1.69E-46 |
| MS.gene060950 | MS.gene20602 | -0.807532 | 4.83E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene20602 | 0.892339 | 1.74E-74 | -1.69E-46 |
| MS.gene061044 | MS.gene20602 | -0.837452 | 5.16E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene20602 | 0.848423 | 6.19E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20602.t1 | MTR_6g008220 | 97.931 | 145 | 2 | 1 | 1 | 145 | 1 | 144 | 7.65e-105 | 295 |
| MS.gene20602.t1 | MTR_6g008220 | 99.029 | 103 | 1 | 0 | 43 | 145 | 1 | 103 | 3.67e-76 | 221 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20602.t1 | AT2G04700 | 74.658 | 146 | 36 | 1 | 1 | 145 | 1 | 146 | 2.52e-78 | 228 |
| MS.gene20602.t1 | AT2G04700 | 74.658 | 146 | 36 | 1 | 1 | 145 | 1 | 146 | 2.52e-78 | 228 |
| MS.gene20602.t1 | AT2G04700 | 63.529 | 85 | 29 | 1 | 63 | 145 | 6 | 90 | 1.72e-33 | 113 |
Find 45 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGAGGCTGCGCAAGGATTT+TGG | 0.144523 | 6.3:-4347553 | MS.gene20602:CDS |
| GTGCACCCAATGAATCTTTA+TGG | 0.264541 | 6.3:+4347944 | None:intergenic |
| AAAAGAATGTTCCTGATTTA+CGG | 0.288914 | 6.3:+4349930 | None:intergenic |
| ACGGAGAGGGGAAGGGGCGG+AGG | 0.323995 | 6.3:+4351865 | None:intergenic |
| AGGGGAAGGGGCGGAGGAAA+CGG | 0.327151 | 6.3:+4351871 | None:intergenic |
| GTGCACCACTCTGCCCTTGC+CGG | 0.356354 | 6.3:-4347927 | MS.gene20602:intron |
| GCGACGACGGAGAGGGGAAG+GGG | 0.358018 | 6.3:+4351859 | None:intergenic |
| GGCTGACCATAAAGATTCAT+TGG | 0.360393 | 6.3:-4347950 | MS.gene20602:CDS |
| TCACCGGCAAAATCGTTATC+AGG | 0.385886 | 6.3:+4346914 | None:intergenic |
| AGTGGAACCTTCTGATAAAT+CGG | 0.392631 | 6.3:-4349987 | MS.gene20602:CDS |
| ACGACGGAGAGGGGAAGGGG+CGG | 0.395791 | 6.3:+4351862 | None:intergenic |
| GAGCAATATGCCCGTAAATC+AGG | 0.400997 | 6.3:-4349941 | MS.gene20602:CDS |
| AAAGAATGTTCCTGATTTAC+GGG | 0.415753 | 6.3:+4349931 | None:intergenic |
| AACAGCAGTTACTCCTTTGT+CGG | 0.421470 | 6.3:+4349904 | None:intergenic |
| CGGCGACGACGGAGAGGGGA+AGG | 0.427256 | 6.3:+4351857 | None:intergenic |
| TGCCTTGCAGACTATCACCT+TGG | 0.428260 | 6.3:-4346769 | MS.gene20602:intron |
| TTACATTGAGCTCGAACGAC+GGG | 0.430081 | 6.3:+4351824 | None:intergenic |
| ATAAATCGGTTGAAATTATG+AGG | 0.478140 | 6.3:-4349973 | MS.gene20602:CDS |
| GCTGACCATAAAGATTCATT+GGG | 0.479818 | 6.3:-4347949 | MS.gene20602:CDS |
| CTCTCTCTCATGGGAACACA+CGG | 0.481015 | 6.3:+4347524 | None:intergenic |
| CCAAAATCCTTGCGCAGCCT+CGG | 0.494274 | 6.3:+4347553 | None:intergenic |
| ATGTCCCTACCTCTCTCTCA+TGG | 0.502746 | 6.3:+4347514 | None:intergenic |
| GGCGACGACGGAGAGGGGAA+GGG | 0.503233 | 6.3:+4351858 | None:intergenic |
| AGTAACTGCTGTTGTTATCA+AGG | 0.507865 | 6.3:-4349894 | MS.gene20602:intron |
| TGATTCTTTAATTTCATCCA+AGG | 0.519163 | 6.3:+4346752 | None:intergenic |
| ATTTCAACCGATTTATCAGA+AGG | 0.525234 | 6.3:+4349980 | None:intergenic |
| CAGAATTACCTGTTCATCAC+CGG | 0.530705 | 6.3:+4346898 | None:intergenic |
| TTTACATTGAGCTCGAACGA+CGG | 0.560983 | 6.3:+4351823 | None:intergenic |
| AGCGAAGGTTGAAGCTTGAG+AGG | 0.562231 | 6.3:+4351898 | None:intergenic |
| CAAGAAGTATTTACCGGCAA+GGG | 0.563318 | 6.3:+4347914 | None:intergenic |
| TGCTGCGGCGACGACGGAGA+GGG | 0.565512 | 6.3:+4351852 | None:intergenic |
| TGTCCCTACCTCTCTCTCAT+GGG | 0.571759 | 6.3:+4347515 | None:intergenic |
| GAACGACGGGGAAGGTGCTG+CGG | 0.574422 | 6.3:+4351837 | None:intergenic |
| AAAGCTGCCGAGGCTGCGCA+AGG | 0.577948 | 6.3:-4347560 | MS.gene20602:CDS |
| GGAAGGTGCTGCGGCGACGA+CGG | 0.586461 | 6.3:+4351846 | None:intergenic |
| GCTGCGGCGACGACGGAGAG+GGG | 0.589010 | 6.3:+4351853 | None:intergenic |
| ACAAGAAGTATTTACCGGCA+AGG | 0.590984 | 6.3:+4347913 | None:intergenic |
| CGTGTGTTCCCATGAGAGAG+AGG | 0.615907 | 6.3:-4347523 | MS.gene20602:intron |
| TTGAGCTCGAACGACGGGGA+AGG | 0.617813 | 6.3:+4351829 | None:intergenic |
| GTGCTGCGGCGACGACGGAG+AGG | 0.621027 | 6.3:+4351851 | None:intergenic |
| GGAGGAAACGGAGAGAGCGA+AGG | 0.629867 | 6.3:+4351883 | None:intergenic |
| TTATGACGATAAAGCTGCCG+AGG | 0.633222 | 6.3:-4347570 | MS.gene20602:CDS |
| TACATTGAGCTCGAACGACG+GGG | 0.648508 | 6.3:+4351825 | None:intergenic |
| TCTCTCTCATGGGAACACAC+GGG | 0.712722 | 6.3:+4347525 | None:intergenic |
| ATTTACCGGCAAGGGCAGAG+TGG | 0.719195 | 6.3:+4347922 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAAAAGTTAAAAATT+TGG | + | chr6.3:4346849-4346868 | None:intergenic | 10.0% |
| !!! | AATTTAAAAGTACTTTTTTT+TGG | - | chr6.3:4348071-4348090 | MS.gene20602:intron | 10.0% |
| !! | AAATAATTATTGAACTAGTA+TGG | - | chr6.3:4348314-4348333 | MS.gene20602:intron | 15.0% |
| !! | AGTTAAGAAAACAATATTAT+GGG | + | chr6.3:4351653-4351672 | None:intergenic | 15.0% |
| !! | ATCATTTCTCTTAAAAATTT+GGG | + | chr6.3:4349512-4349531 | None:intergenic | 15.0% |
| !! | ATGAAACTACAATTTATATT+TGG | + | chr6.3:4348815-4348834 | None:intergenic | 15.0% |
| !! | TATCATTTCTCTTAAAAATT+TGG | + | chr6.3:4349513-4349532 | None:intergenic | 15.0% |
| !!! | AACGTTTCTTTTTTATATAA+AGG | - | chr6.3:4350037-4350056 | MS.gene20602:intron | 15.0% |
| !!! | AATTTAACCTTTTAAAATGA+TGG | - | chr6.3:4348179-4348198 | MS.gene20602:intron | 15.0% |
| !!! | AGGTATTGATTTTATTAAAA+TGG | - | chr6.3:4351371-4351390 | MS.gene20602:intron | 15.0% |
| !!! | AGTATTTGTTTTGATATATT+TGG | - | chr6.3:4347438-4347457 | MS.gene20602:intron | 15.0% |
| !!! | ATTCTTTTTTTTTTTTTGTG+TGG | - | chr6.3:4348988-4349007 | MS.gene20602:intron | 15.0% |
| !!! | CATTTTAAAAGGTTAAATTT+TGG | + | chr6.3:4348178-4348197 | None:intergenic | 15.0% |
| !!! | TTCTTTTTTTTTTTTTGTGT+GGG | - | chr6.3:4348989-4349008 | MS.gene20602:intron | 15.0% |
| !!! | TTTGATTTTGATTTTTTTCA+TGG | - | chr6.3:4346887-4346906 | MS.gene20602:intron | 15.0% |
| !! | AAATTCTTGCATTTATACTT+CGG | + | chr6.3:4349729-4349748 | None:intergenic | 20.0% |
| !! | AATGCTTCTTTCAAAAAAAA+TGG | - | chr6.3:4350302-4350321 | MS.gene20602:intron | 20.0% |
| !! | CCATTCCAAAAATTTAAATT+AGG | + | chr6.3:4349850-4349869 | None:intergenic | 20.0% |
| !! | GAGTTAAGAAAACAATATTA+TGG | + | chr6.3:4351654-4351673 | None:intergenic | 20.0% |
| !! | GTTAAGAAAACAATATTATG+GGG | + | chr6.3:4351652-4351671 | None:intergenic | 20.0% |
| !! | TCTGAAAATGTATTTATTAG+TGG | - | chr6.3:4349436-4349455 | MS.gene20602:intron | 20.0% |
| !! | TGAACTTTCTAAATATATAC+CGG | - | chr6.3:4348408-4348427 | MS.gene20602:intron | 20.0% |
| !! | TTAAGAAAACAATATTATGG+GGG | + | chr6.3:4351651-4351670 | None:intergenic | 20.0% |
| !!! | ATTCTCTGTAATTTAAGTTA+AGG | - | chr6.3:4351614-4351633 | MS.gene20602:intron | 20.0% |
| !!! | CCTAATTTAAATTTTTGGAA+TGG | - | chr6.3:4349847-4349866 | MS.gene20602:intron | 20.0% |
| !!! | CTTTTTTATATAAAGGCTTT+TGG | - | chr6.3:4350044-4350063 | MS.gene20602:intron | 20.0% |
| !!! | GACACTTATATTTTGTTTAA+AGG | - | chr6.3:4351351-4351370 | MS.gene20602:intron | 20.0% |
| !!! | TAAACAAACTTGTATTTTCT+GGG | - | chr6.3:4351315-4351334 | MS.gene20602:intron | 20.0% |
| !!! | TAAATTTTTGGAATGGATAA+TGG | - | chr6.3:4349854-4349873 | MS.gene20602:intron | 20.0% |
| !!! | TATTTTCCATTAAAAAACAG+AGG | + | chr6.3:4350227-4350246 | None:intergenic | 20.0% |
| !!! | TCGAACCTAATTTAAATTTT+TGG | - | chr6.3:4349842-4349861 | MS.gene20602:intron | 20.0% |
| !!! | TGATTTTGTAAAATTGTTTC+TGG | - | chr6.3:4347127-4347146 | MS.gene20602:intron | 20.0% |
| !!! | TTAAACAAACTTGTATTTTC+TGG | - | chr6.3:4351314-4351333 | MS.gene20602:intron | 20.0% |
| !!! | TTTCGTTTCATTTTCATAAA+CGG | - | chr6.3:4348949-4348968 | MS.gene20602:intron | 20.0% |
| ! | AAAAGAATGTTCCTGATTTA+CGG | + | chr6.3:4348712-4348731 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr6.3:4349637-4349656 | MS.gene20602:intron | 25.0% |
| ! | AATTTGACACTTCATATTGA+AGG | - | chr6.3:4348003-4348022 | MS.gene20602:intron | 25.0% |
| ! | ATAAAATTGTTGAGGAATGA+TGG | - | chr6.3:4347976-4347995 | MS.gene20602:intron | 25.0% |
| ! | ATAAATCGGTTGAAATTATG+AGG | - | chr6.3:4348666-4348685 | MS.gene20602:intron | 25.0% |
| ! | ATCATAACAAAATTCACACA+GGG | + | chr6.3:4350204-4350223 | None:intergenic | 25.0% |
| ! | ATTCAAAAATCATCTTCTCA+TGG | - | chr6.3:4350087-4350106 | MS.gene20602:intron | 25.0% |
| ! | ATTTGACACTTCATATTGAA+GGG | - | chr6.3:4348004-4348023 | MS.gene20602:intron | 25.0% |
| ! | CATACAACTGATATTTACTT+TGG | - | chr6.3:4350619-4350638 | MS.gene20602:intron | 25.0% |
| ! | CATTCTAATCAAAATCTGTT+TGG | + | chr6.3:4351813-4351832 | None:intergenic | 25.0% |
| ! | GAAAATGTATTTATTAGTGG+TGG | - | chr6.3:4349439-4349458 | MS.gene20602:intron | 25.0% |
| ! | TAACATGAAGTTAAGATTTG+TGG | - | chr6.3:4347502-4347521 | MS.gene20602:intron | 25.0% |
| ! | TATTTAATAACACTGCAACA+AGG | + | chr6.3:4350756-4350775 | None:intergenic | 25.0% |
| ! | TCAATAAAGTTGTCATCAAA+TGG | - | chr6.3:4349663-4349682 | MS.gene20602:intron | 25.0% |
| ! | TGTATTACAAAATACGATCA+CGG | + | chr6.3:4351454-4351473 | None:intergenic | 25.0% |
| ! | TTCAACATTTATAACATTGC+TGG | - | chr6.3:4348499-4348518 | MS.gene20602:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr6.3:4349625-4349644 | None:intergenic | 25.0% |
| ! | TTGTTCTCATAAAATTGTTG+AGG | - | chr6.3:4347968-4347987 | MS.gene20602:intron | 25.0% |
| ! | TTTAAATTCCTACAACAGAA+TGG | + | chr6.3:4348059-4348078 | None:intergenic | 25.0% |
| ! | TTTCTATAGAAATAATGTGC+TGG | - | chr6.3:4348622-4348641 | MS.gene20602:intron | 25.0% |
| ! | TTTCTCTTAAAAATTTGGGT+TGG | + | chr6.3:4349508-4349527 | None:intergenic | 25.0% |
| !! | AAAAAACAAGTTGAGAAAGA+AGG | + | chr6.3:4349216-4349235 | None:intergenic | 25.0% |
| !! | AATATAAGTGTCATTAATCG+CGG | + | chr6.3:4351343-4351362 | None:intergenic | 25.0% |
| !! | ATTGTTTTCTTAACTCATTG+TGG | - | chr6.3:4351658-4351677 | MS.gene20602:intron | 25.0% |
| !! | CATTCAAAATCAATTTTGTG+CGG | - | chr6.3:4347638-4347657 | MS.gene20602:intron | 25.0% |
| !! | GAAAATTTTCCTATACATCT+TGG | - | chr6.3:4350440-4350459 | MS.gene20602:intron | 25.0% |
| !! | GTCAAATTTGAAAGCTTTTT+GGG | - | chr6.3:4347722-4347741 | MS.gene20602:intron | 25.0% |
| !! | GTTTGATATAGTTGATTCAT+AGG | + | chr6.3:4351418-4351437 | None:intergenic | 25.0% |
| !! | TCTAAAATCAGTCATAATAC+TGG | + | chr6.3:4347892-4347911 | None:intergenic | 25.0% |
| !! | TGATTCTTTAATTTCATCCA+AGG | + | chr6.3:4351890-4351909 | None:intergenic | 25.0% |
| !! | TGTAATACATATTTGTTACC+AGG | - | chr6.3:4351465-4351484 | MS.gene20602:intron | 25.0% |
| !! | TGTCAAATTTGAAAGCTTTT+TGG | - | chr6.3:4347721-4347740 | MS.gene20602:intron | 25.0% |
| !! | TGTTTAGTAAGTGTTGTTAA+TGG | - | chr6.3:4346969-4346988 | MS.gene20602:intron | 25.0% |
| !! | TTCTCTTAAAAATTTGGGTT+GGG | + | chr6.3:4349507-4349526 | None:intergenic | 25.0% |
| !!! | ATGGCATGAATTTTTAAGTA+TGG | - | chr6.3:4348333-4348352 | MS.gene20602:intron | 25.0% |
| !!! | ATTGATTTTGCCTTCAAAAT+TGG | + | chr6.3:4347279-4347298 | None:intergenic | 25.0% |
| !!! | ATTTTGGCTAGATATGAAAA+AGG | - | chr6.3:4348140-4348159 | MS.gene20602:intron | 25.0% |
| !!! | GACTTTCTTAGTTTGTATAT+TGG | - | chr6.3:4351502-4351521 | MS.gene20602:intron | 25.0% |
| !!! | GTAAAACAAGAAGTATTTAC+CGG | + | chr6.3:4350734-4350753 | None:intergenic | 25.0% |
| !!! | TATGATCCTCTGTTTTTTAA+TGG | - | chr6.3:4350218-4350237 | MS.gene20602:intron | 25.0% |
| !!! | TGAATTTTGTTTTGATCTTC+TGG | - | chr6.3:4350168-4350187 | MS.gene20602:intron | 25.0% |
| !!! | TGTGATTTATGTTTCTAGTT+GGG | - | chr6.3:4349273-4349292 | MS.gene20602:intron | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr6.3:4349638-4349657 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTGAGTTCTGTAT+TGG | - | chr6.3:4349227-4349246 | MS.gene20602:intron | 25.0% |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr6.3:4349612-4349631 | None:intergenic | 30.0% | |
| AAAGAATGTTCCTGATTTAC+GGG | + | chr6.3:4348711-4348730 | None:intergenic | 30.0% | |
| AAAGCACATATGGAAATGAA+AGG | - | chr6.3:4350470-4350489 | MS.gene20602:intron | 30.0% | |
| AATGTTGTTGAATCAAGTCT+CGG | - | chr6.3:4348856-4348875 | MS.gene20602:intron | 30.0% | |
| ACAAAATTGTCTTTGCAACA+AGG | + | chr6.3:4350942-4350961 | None:intergenic | 30.0% | |
| ACATTTGCATCAACAACTAA+AGG | + | chr6.3:4348841-4348860 | None:intergenic | 30.0% | |
| AGTACAAAATGTGATGCAAT+AGG | - | chr6.3:4350854-4350873 | MS.gene20602:intron | 30.0% | |
| ATATCAGTTGTATGCATACA+CGG | + | chr6.3:4350613-4350632 | None:intergenic | 30.0% | |
| ATGAAGCACAAGCATATAAA+CGG | + | chr6.3:4348256-4348275 | None:intergenic | 30.0% | |
| ATGTTCTTTGTCAAGAAAAG+TGG | - | chr6.3:4351554-4351573 | MS.gene20602:intron | 30.0% | |
| CTTCATGTTAGAATCAATTC+AGG | + | chr6.3:4347492-4347511 | None:intergenic | 30.0% | |
| GAAGGAAAATAAGTAATAGC+CGG | + | chr6.3:4351159-4351178 | None:intergenic | 30.0% | |
| GAATTCAAAGTTGAGAAAGA+AGG | + | chr6.3:4349173-4349192 | None:intergenic | 30.0% | |
| GATCAAAACAAAATTCACAC+AGG | + | chr6.3:4350165-4350184 | None:intergenic | 30.0% | |
| GATCATAACAAAATTCACAC+AGG | + | chr6.3:4350205-4350224 | None:intergenic | 30.0% | |
| GTGTCTTTATTCTATAGTTC+TGG | - | chr6.3:4350960-4350979 | MS.gene20602:intron | 30.0% | |
| GTTTGACATCACTATTAGAA+TGG | + | chr6.3:4347362-4347381 | None:intergenic | 30.0% | |
| TACTGATATCGTTTCTACTT+TGG | - | chr6.3:4350656-4350675 | MS.gene20602:intron | 30.0% | |
| TAGAACGCTATACTAATTTG+TGG | - | chr6.3:4349929-4349948 | MS.gene20602:CDS | 30.0% | |
| TCAAACATACATCCTATGTT+TGG | - | chr6.3:4347376-4347395 | MS.gene20602:intron | 30.0% | |
| TCTGGATAAAAGTTAGATGA+AGG | - | chr6.3:4347145-4347164 | MS.gene20602:intron | 30.0% | |
| TTACCATGAAAAATCCAACT+GGG | + | chr6.3:4346913-4346932 | None:intergenic | 30.0% | |
| TTCAGACCATATCTGATTAA+AGG | + | chr6.3:4349422-4349441 | None:intergenic | 30.0% | |
| TTTACCATGAAAAATCCAAC+TGG | + | chr6.3:4346914-4346933 | None:intergenic | 30.0% | |
| TTTATATGCTTGTGCTTCAT+AGG | - | chr6.3:4348256-4348275 | MS.gene20602:intron | 30.0% | |
| TTTCTACTACCAAGATGTAT+AGG | + | chr6.3:4350452-4350471 | None:intergenic | 30.0% | |
| TTTGACACTTCATATTGAAG+GGG | - | chr6.3:4348005-4348024 | MS.gene20602:intron | 30.0% | |
| ! | AAAGTGAGTTGAATGTAAAG+TGG | + | chr6.3:4347603-4347622 | None:intergenic | 30.0% |
| ! | ACCTAGAAGTTTTACGTTAT+GGG | - | chr6.3:4349323-4349342 | MS.gene20602:intron | 30.0% |
| ! | ATCCAAAATCTCTGTGTTTT+AGG | - | chr6.3:4351044-4351063 | MS.gene20602:intron | 30.0% |
| ! | ATTTCAACCGATTTATCAGA+AGG | + | chr6.3:4348662-4348681 | None:intergenic | 30.0% |
| ! | CACATGACCATCATTTTAAA+AGG | + | chr6.3:4348189-4348208 | None:intergenic | 30.0% |
| ! | GCATTGAACTTGATAACTTA+AGG | + | chr6.3:4351187-4351206 | None:intergenic | 30.0% |
| ! | TAGTAAGTGTTGTTAATGGT+TGG | - | chr6.3:4346973-4346992 | MS.gene20602:intron | 30.0% |
| ! | TCATGTAGAACCAATTTTGA+AGG | - | chr6.3:4347266-4347285 | MS.gene20602:intron | 30.0% |
| ! | TCATTACCAAAACTTGCTTA+TGG | + | chr6.3:4349475-4349494 | None:intergenic | 30.0% |
| !! | CTGTATTGGTTTCAAATGTT+AGG | - | chr6.3:4349241-4349260 | MS.gene20602:intron | 30.0% |
| !! | CTGTGATTTATGTTTCTAGT+TGG | - | chr6.3:4349272-4349291 | MS.gene20602:intron | 30.0% |
| !! | TCAAAATCTGTTTGGTTTGT+TGG | + | chr6.3:4351805-4351824 | None:intergenic | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr6.3:4349540-4349559 | MS.gene20602:intron | 30.0% |
| !!! | ATGTTTCTAGTTGGGTTTTT+AGG | - | chr6.3:4349281-4349300 | MS.gene20602:intron | 30.0% |
| !!! | TGTGGTTTTGTTTGATAGAA+AGG | - | chr6.3:4351676-4351695 | MS.gene20602:intron | 30.0% |
| AAAATTATGCTACGCTAGAG+CGG | + | chr6.3:4350801-4350820 | None:intergenic | 35.0% | |
| AACTACCAAGTTTGATATGC+TGG | - | chr6.3:4350504-4350523 | MS.gene20602:intron | 35.0% | |
| AAGACGAGTACTAGGTTAAT+GGG | + | chr6.3:4348465-4348484 | None:intergenic | 35.0% | |
| AGACCATATCTGATTAAAGG+TGG | + | chr6.3:4349419-4349438 | None:intergenic | 35.0% | |
| AGCATATAAACGGACACATA+AGG | + | chr6.3:4348246-4348265 | None:intergenic | 35.0% | |
| AGTAACTGCTGTTGTTATCA+AGG | - | chr6.3:4348745-4348764 | MS.gene20602:intron | 35.0% | |
| AGTGGAACCTTCTGATAAAT+CGG | - | chr6.3:4348652-4348671 | MS.gene20602:intron | 35.0% | |
| ATCCTGTAATACATTGACGA+TGG | - | chr6.3:4349819-4349838 | MS.gene20602:intron | 35.0% | |
| ATTAACCTAGTACTCGTCTT+AGG | - | chr6.3:4348465-4348484 | MS.gene20602:intron | 35.0% | |
| CAAAAGCAATCGAACATGTA+TGG | - | chr6.3:4347305-4347324 | MS.gene20602:intron | 35.0% | |
| CATAATACTGGTACCAGAAT+TGG | + | chr6.3:4347880-4347899 | None:intergenic | 35.0% | |
| CATGGGAGATTCATTATTGT+TGG | - | chr6.3:4348921-4348940 | MS.gene20602:intron | 35.0% | |
| CATGTTAGAATCAATTCAGG+AGG | + | chr6.3:4347489-4347508 | None:intergenic | 35.0% | |
| GACCATATCTGATTAAAGGT+GGG | + | chr6.3:4349418-4349437 | None:intergenic | 35.0% | |
| GCAGTCATAATTGATTATGG+AGG | - | chr6.3:4347412-4347431 | MS.gene20602:intron | 35.0% | |
| GCTGACCATAAAGATTCATT+GGG | - | chr6.3:4350690-4350709 | MS.gene20602:intron | 35.0% | |
| GGAATATAAACTATCGAGCT+TGG | - | chr6.3:4350344-4350363 | MS.gene20602:intron | 35.0% | |
| GTAGCAAATAAGTGCATGAT+TGG | + | chr6.3:4347666-4347685 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr6.3:4349545-4349564 | None:intergenic | 35.0% | |
| TAAATATATACCGGTCTAGC+CGG | - | chr6.3:4348417-4348436 | MS.gene20602:intron | 35.0% | |
| TAAGACGAGTACTAGGTTAA+TGG | + | chr6.3:4348466-4348485 | None:intergenic | 35.0% | |
| TCATTCCAGCATATCAAACT+TGG | + | chr6.3:4350512-4350531 | None:intergenic | 35.0% | |
| TGATAACTTAAGGTCTGAGA+AGG | + | chr6.3:4351177-4351196 | None:intergenic | 35.0% | |
| TGCATTTATACTTCGGCTTT+CGG | + | chr6.3:4349722-4349741 | None:intergenic | 35.0% | |
| TGTTGCTGTGCTTTCAATTT+CGG | - | chr6.3:4348581-4348600 | MS.gene20602:intron | 35.0% | |
| TTATACTACTAGCTGCTACT+TGG | - | chr6.3:4349100-4349119 | MS.gene20602:intron | 35.0% | |
| TTGTACTAAATAGCGTATCG+CGG | + | chr6.3:4350841-4350860 | None:intergenic | 35.0% | |
| TTTATTATTGACACCTCCAC+AGG | + | chr6.3:4347802-4347821 | None:intergenic | 35.0% | |
| TTTCTCAATTACGCAGATTC+TGG | + | chr6.3:4350412-4350431 | None:intergenic | 35.0% | |
| TTTGGATAGCAGAAAATAGC+AGG | + | chr6.3:4350906-4350925 | None:intergenic | 35.0% | |
| ! | AAGTTCGAAAGTGAGTTTTC+CGG | - | chr6.3:4350541-4350560 | MS.gene20602:intron | 35.0% |
| ! | ATTTTGTTGAACGTGAGTCA+TGG | - | chr6.3:4348903-4348922 | MS.gene20602:intron | 35.0% |
| ! | CAAGGCAGTGTTATCAATTT+TGG | + | chr6.3:4350924-4350943 | None:intergenic | 35.0% |
| ! | CCTAGAAGTTTTACGTTATG+GGG | - | chr6.3:4349324-4349343 | MS.gene20602:intron | 35.0% |
| ! | CTAGAAGTTTTACGTTATGG+GGG | - | chr6.3:4349325-4349344 | MS.gene20602:intron | 35.0% |
| ! | GACCTAGAAGTTTTACGTTA+TGG | - | chr6.3:4349322-4349341 | MS.gene20602:intron | 35.0% |
| ! | GCATTTTCACAAACATCTTC+TGG | + | chr6.3:4347018-4347037 | None:intergenic | 35.0% |
| ! | GGTTTGAAATGCTGAATGTT+GGG | - | chr6.3:4350323-4350342 | MS.gene20602:intron | 35.0% |
| ! | GTAATACCCAAAGTACTCTT+AGG | - | chr6.3:4349998-4350017 | MS.gene20602:intron | 35.0% |
| ! | TGCCTAAAACACAGAGATTT+TGG | + | chr6.3:4351049-4351068 | None:intergenic | 35.0% |
| ! | TGGTAGTAGAAAAGCACATA+TGG | - | chr6.3:4350460-4350479 | MS.gene20602:intron | 35.0% |
| ! | TGGTTTGAAATGCTGAATGT+TGG | - | chr6.3:4350322-4350341 | MS.gene20602:intron | 35.0% |
| ! | TTTTGTTGAACGTGAGTCAT+GGG | - | chr6.3:4348904-4348923 | MS.gene20602:intron | 35.0% |
| !! | AAACCTTCCTAAGAGTACTT+TGG | + | chr6.3:4350008-4350027 | None:intergenic | 35.0% |
| !! | AACCTTCCTAAGAGTACTTT+GGG | + | chr6.3:4350007-4350026 | None:intergenic | 35.0% |
| !! | ATCGTTTCTACTTTGGAACA+GGG | - | chr6.3:4350663-4350682 | MS.gene20602:intron | 35.0% |
| !! | TATCGTTTCTACTTTGGAAC+AGG | - | chr6.3:4350662-4350681 | MS.gene20602:intron | 35.0% |
| !!! | ACTTTTTTTTGGACTCGACA+TGG | - | chr6.3:4348082-4348101 | MS.gene20602:intron | 35.0% |
| !!! | AGTTTTGGTAATGACTGAGT+TGG | - | chr6.3:4349481-4349500 | MS.gene20602:intron | 35.0% |
| !!! | TTTGAAAGCTTTTTGGGTTC+TGG | - | chr6.3:4347728-4347747 | MS.gene20602:intron | 35.0% |
| AAATTATGCTACGCTAGAGC+GGG | + | chr6.3:4350800-4350819 | None:intergenic | 40.0% | |
| AACAGCAGTTACTCCTTTGT+CGG | + | chr6.3:4348738-4348757 | None:intergenic | 40.0% | |
| ACATGATCAGTTGTGCAACT+AGG | + | chr6.3:4350265-4350284 | None:intergenic | 40.0% | |
| ACTCGTCTTAGGATGTAACT+GGG | - | chr6.3:4348476-4348495 | MS.gene20602:intron | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr6.3:4349602-4349621 | None:intergenic | 40.0% | |
| AGGATGTGAATTCGATACGA+GGG | + | chr6.3:4350145-4350164 | None:intergenic | 40.0% | |
| CAGAATTACCTGTTCATCAC+CGG | + | chr6.3:4351744-4351763 | None:intergenic | 40.0% | |
| CCCCATAACGTAAAACTTCT+AGG | + | chr6.3:4349327-4349346 | None:intergenic | 40.0% | |
| GACCATCGTCAATGTATTAC+AGG | + | chr6.3:4349824-4349843 | None:intergenic | 40.0% | |
| GGCTGACCATAAAGATTCAT+TGG | - | chr6.3:4350689-4350708 | MS.gene20602:intron | 40.0% | |
| GGGGCAGTCATAATTGATTA+TGG | - | chr6.3:4347409-4347428 | MS.gene20602:intron | 40.0% | |
| GTCCCACCTTTAATCAGATA+TGG | - | chr6.3:4349413-4349432 | MS.gene20602:intron | 40.0% | |
| GTGCACCCAATGAATCTTTA+TGG | + | chr6.3:4350698-4350717 | None:intergenic | 40.0% | |
| GTTGAGAAAGAAGGACAATC+TGG | + | chr6.3:4349164-4349183 | None:intergenic | 40.0% | |
| TACATCCTAAGACGAGTACT+AGG | + | chr6.3:4348473-4348492 | None:intergenic | 40.0% | |
| TACTCGTCTTAGGATGTAAC+TGG | - | chr6.3:4348475-4348494 | MS.gene20602:intron | 40.0% | |
| TCTAGCCAAAATTGAAGTGC+CGG | + | chr6.3:4348132-4348151 | None:intergenic | 40.0% | |
| TGAATGTAAAGTGGCGTGTT+TGG | + | chr6.3:4347594-4347613 | None:intergenic | 40.0% | |
| TGTTACCAGGTTTACTACGT+TGG | - | chr6.3:4351478-4351497 | MS.gene20602:intron | 40.0% | |
| TTTACATTGAGCTCGAACGA+CGG | + | chr6.3:4346819-4346838 | None:intergenic | 40.0% | |
| ! | ACCAAAACTTGCTTATGGAG+AGG | + | chr6.3:4349470-4349489 | None:intergenic | 40.0% |
| ! | ATGCACTTATTTGCTACCTC+GGG | - | chr6.3:4347669-4347688 | MS.gene20602:intron | 40.0% |
| ! | CAACTAGGAGCATGTAAAAG+TGG | + | chr6.3:4350250-4350269 | None:intergenic | 40.0% |
| ! | CATGCACTTATTTGCTACCT+CGG | - | chr6.3:4347668-4347687 | MS.gene20602:intron | 40.0% |
| ! | CTATGTTTGGTTCGACACTT+GGG | - | chr6.3:4347389-4347408 | MS.gene20602:intron | 40.0% |
| ! | GAAAGCACAGCAACAGAATT+TGG | + | chr6.3:4348576-4348595 | None:intergenic | 40.0% |
| ! | GAGTGAGAAAAAGCATGCAA+TGG | + | chr6.3:4351706-4351725 | None:intergenic | 40.0% |
| ! | GTACTAGGTTAATGGGTCAT+TGG | + | chr6.3:4348458-4348477 | None:intergenic | 40.0% |
| ! | TACCCAAAGTACTCTTAGGA+AGG | - | chr6.3:4350002-4350021 | MS.gene20602:intron | 40.0% |
| ! | TATGTTTGGTTCGACACTTG+GGG | - | chr6.3:4347390-4347409 | MS.gene20602:intron | 40.0% |
| ! | TATTTGCTACCTCGGGAATT+GGG | - | chr6.3:4347676-4347695 | MS.gene20602:intron | 40.0% |
| ! | TCCTCTCCATAAGCAAGTTT+TGG | - | chr6.3:4349466-4349485 | MS.gene20602:intron | 40.0% |
| ! | TTATTTGCTACCTCGGGAAT+TGG | - | chr6.3:4347675-4347694 | MS.gene20602:intron | 40.0% |
| !! | ACAAGAAGTATTTACCGGCA+AGG | + | chr6.3:4350729-4350748 | None:intergenic | 40.0% |
| !! | ACATTCTTTTGTGCCGACAA+AGG | - | chr6.3:4348722-4348741 | MS.gene20602:intron | 40.0% |
| !! | ACTCCTGATAACGATTTTGC+CGG | - | chr6.3:4351722-4351741 | MS.gene20602:intron | 40.0% |
| !! | CAAGAAGTATTTACCGGCAA+GGG | + | chr6.3:4350728-4350747 | None:intergenic | 40.0% |
| !! | CATGTTCGATTGCTTTTGAG+TGG | + | chr6.3:4347303-4347322 | None:intergenic | 40.0% |
| !! | TAATGTGCTGGTTCTTTCAG+TGG | - | chr6.3:4348634-4348653 | MS.gene20602:intron | 40.0% |
| !! | TTCTACTTTGGAACAGGGTT+TGG | - | chr6.3:4350668-4350687 | MS.gene20602:intron | 40.0% |
| !!! | GATTTTTTTCATGGCCCAGT+TGG | - | chr6.3:4346896-4346915 | MS.gene20602:intron | 40.0% |
| !!! | GGGATCTTTACCTGTTTTTG+TGG | - | chr6.3:4349009-4349028 | MS.gene20602:intron | 40.0% |
| AACCTATGTATGCAACCACG+CGG | + | chr6.3:4350986-4351005 | None:intergenic | 45.0% | |
| AATTATGCTACGCTAGAGCG+GGG | + | chr6.3:4350799-4350818 | None:intergenic | 45.0% | |
| ACATCAAAACCCAATTCCCG+AGG | + | chr6.3:4347688-4347707 | None:intergenic | 45.0% | |
| AGTCACCAACGTAGTAAACC+TGG | + | chr6.3:4351486-4351505 | None:intergenic | 45.0% | |
| ATCCAAGGTGATAGTCTGCA+AGG | + | chr6.3:4351875-4351894 | None:intergenic | 45.0% | |
| CACTCACACACCACAAAAAC+AGG | + | chr6.3:4349022-4349041 | None:intergenic | 45.0% | |
| CAGACACTCCATTCTGTTGT+AGG | - | chr6.3:4348048-4348067 | MS.gene20602:intron | 45.0% | |
| CAGCTTGAACTGACCAATTC+TGG | - | chr6.3:4347864-4347883 | MS.gene20602:intron | 45.0% | |
| CAGGATGTGAATTCGATACG+AGG | + | chr6.3:4350146-4350165 | None:intergenic | 45.0% | |
| CGATCACGGCTATGAATTCT+CGG | + | chr6.3:4351440-4351459 | None:intergenic | 45.0% | |
| GAGCAATATGCCCGTAAATC+AGG | - | chr6.3:4348698-4348717 | MS.gene20602:intron | 45.0% | |
| GCCTATCAACAACGACAATC+CGG | + | chr6.3:4350563-4350582 | None:intergenic | 45.0% | |
| GGTAGGGACATCTTTACAAC+CGG | - | chr6.3:4351137-4351156 | MS.gene20602:intron | 45.0% | |
| TCACCGGCAAAATCGTTATC+AGG | + | chr6.3:4351728-4351747 | None:intergenic | 45.0% | |
| TCCGGATTGTCGTTGTTGAT+AGG | - | chr6.3:4350559-4350578 | MS.gene20602:intron | 45.0% | |
| TGCACAACTGATCATGTGTC+TGG | - | chr6.3:4350268-4350287 | MS.gene20602:intron | 45.0% | |
| TGTGAATGCGCATGTGTGAA+TGG | - | chr6.3:4348211-4348230 | MS.gene20602:intron | 45.0% | |
| TTACATTGAGCTCGAACGAC+GGG | + | chr6.3:4346818-4346837 | None:intergenic | 45.0% | |
| TTATGACGATAAAGCTGCCG+AGG | - | chr6.3:4351069-4351088 | MS.gene20602:intron | 45.0% | |
| TTGGTCGATCAGTGAATCAC+CGG | + | chr6.3:4348439-4348458 | None:intergenic | 45.0% | |
| ! | CCTATGTTTGGTTCGACACT+TGG | - | chr6.3:4347388-4347407 | MS.gene20602:intron | 45.0% |
| ! | TGGCCCAGTTGGATTTTTCA+TGG | - | chr6.3:4346907-4346926 | MS.gene20602:CDS | 45.0% |
| ! | TTTTTGGACTCGACATGGCT+TGG | - | chr6.3:4348087-4348106 | MS.gene20602:intron | 45.0% |
| !! | CCAAGTGTCGAACCAAACAT+AGG | + | chr6.3:4347391-4347410 | None:intergenic | 45.0% |
| AGCGAAGGTTGAAGCTTGAG+AGG | + | chr6.3:4346744-4346763 | None:intergenic | 50.0% | |
| AGCGTATCGCGGAACAAAAG+CGG | + | chr6.3:4350830-4350849 | None:intergenic | 50.0% | |
| ATCTACGTCCATCGCTGTGA+TGG | + | chr6.3:4349779-4349798 | None:intergenic | 50.0% | |
| ATGTCCCTACCTCTCTCTCA+TGG | + | chr6.3:4351128-4351147 | None:intergenic | 50.0% | |
| CTCTCTCTCATGGGAACACA+CGG | + | chr6.3:4351118-4351137 | None:intergenic | 50.0% | |
| CTGATCATGTGTCTGGCATG+AGG | - | chr6.3:4350275-4350294 | MS.gene20602:intron | 50.0% | |
| GCATATGTGCAAACCTGTGG+AGG | - | chr6.3:4347786-4347805 | MS.gene20602:intron | 50.0% | |
| GCTGCATATGTGCAAACCTG+TGG | - | chr6.3:4347783-4347802 | MS.gene20602:intron | 50.0% | |
| GTTCCCATGAGAGAGAGGTA+GGG | - | chr6.3:4351121-4351140 | MS.gene20602:intron | 50.0% | |
| TACATTGAGCTCGAACGACG+GGG | + | chr6.3:4346817-4346836 | None:intergenic | 50.0% | |
| TCTACGTCCATCGCTGTGAT+GGG | + | chr6.3:4349778-4349797 | None:intergenic | 50.0% | |
| TCTCTCTCATGGGAACACAC+GGG | + | chr6.3:4351117-4351136 | None:intergenic | 50.0% | |
| TGCCTTGCAGACTATCACCT+TGG | - | chr6.3:4351870-4351889 | MS.gene20602:CDS | 50.0% | |
| TGTCCCTACCTCTCTCTCAT+GGG | + | chr6.3:4351127-4351146 | None:intergenic | 50.0% | |
| TGTTCCCATGAGAGAGAGGT+AGG | - | chr6.3:4351120-4351139 | MS.gene20602:intron | 50.0% | |
| ! | CCTTGCCGGCACTTCAATTT+TGG | - | chr6.3:4348124-4348143 | MS.gene20602:intron | 50.0% |
| ! | CGATTTTGCCGGTGATGAAC+AGG | - | chr6.3:4351733-4351752 | MS.gene20602:intron | 50.0% |
| !! | ATTCTATAGTTCTGGCCGCG+TGG | - | chr6.3:4350968-4350987 | MS.gene20602:intron | 50.0% |
| !! | CCAAAATTGAAGTGCCGGCA+AGG | + | chr6.3:4348127-4348146 | None:intergenic | 50.0% |
| ATGCAGCCAGAAAGCCTTGC+CGG | - | chr6.3:4348110-4348129 | MS.gene20602:intron | 55.0% | |
| ATTTACCGGCAAGGGCAGAG+TGG | + | chr6.3:4350720-4350739 | None:intergenic | 55.0% | |
| ATTTGCCCCCATCACAGCGA+TGG | - | chr6.3:4349768-4349787 | MS.gene20602:intron | 55.0% | |
| CCAAAATCCTTGCGCAGCCT+CGG | + | chr6.3:4351089-4351108 | None:intergenic | 55.0% | |
| CGTGTGTTCCCATGAGAGAG+AGG | - | chr6.3:4351116-4351135 | MS.gene20602:intron | 55.0% | |
| CTACGTCCATCGCTGTGATG+GGG | + | chr6.3:4349777-4349796 | None:intergenic | 55.0% | |
| TACGTCCATCGCTGTGATGG+GGG | + | chr6.3:4349776-4349795 | None:intergenic | 55.0% | |
| ! | ATGGAGTGTCTGACACGCGT+CGG | + | chr6.3:4348040-4348059 | None:intergenic | 55.0% |
| ! | CAGTGAATCACCGGCTAGAC+CGG | + | chr6.3:4348430-4348449 | None:intergenic | 55.0% |
| GGAGGAAACGGAGAGAGCGA+AGG | + | chr6.3:4346759-4346778 | None:intergenic | 60.0% | |
| GGCCGCGTGGTTGCATACAT+AGG | - | chr6.3:4350981-4351000 | MS.gene20602:intron | 60.0% | |
| TTGAGCTCGAACGACGGGGA+AGG | + | chr6.3:4346813-4346832 | None:intergenic | 60.0% | |
| ! | CCGAGGCTGCGCAAGGATTT+TGG | - | chr6.3:4351086-4351105 | MS.gene20602:intron | 60.0% |
| !! | GAAGTGCCGGCAAGGCTTTC+TGG | + | chr6.3:4348119-4348138 | None:intergenic | 60.0% |
| AAAGCTGCCGAGGCTGCGCA+AGG | - | chr6.3:4351079-4351098 | MS.gene20602:intron | 65.0% | |
| AGGGGAAGGGGCGGAGGAAA+CGG | + | chr6.3:4346771-4346790 | None:intergenic | 65.0% | |
| GTGCACCACTCTGCCCTTGC+CGG | - | chr6.3:4350712-4350731 | MS.gene20602:intron | 65.0% | |
| !! | GAACGACGGGGAAGGTGCTG+CGG | + | chr6.3:4346805-4346824 | None:intergenic | 65.0% |
| ACGACGGAGAGGGGAAGGGG+CGG | + | chr6.3:4346780-4346799 | None:intergenic | 70.0% | |
| GCGACGACGGAGAGGGGAAG+GGG | + | chr6.3:4346783-4346802 | None:intergenic | 70.0% | |
| GGCGACGACGGAGAGGGGAA+GGG | + | chr6.3:4346784-4346803 | None:intergenic | 70.0% | |
| TGCTGCGGCGACGACGGAGA+GGG | + | chr6.3:4346790-4346809 | None:intergenic | 70.0% | |
| !! | GGAAGGTGCTGCGGCGACGA+CGG | + | chr6.3:4346796-4346815 | None:intergenic | 70.0% |
| ACGGAGAGGGGAAGGGGCGG+AGG | + | chr6.3:4346777-4346796 | None:intergenic | 75.0% | |
| CGGCGACGACGGAGAGGGGA+AGG | + | chr6.3:4346785-4346804 | None:intergenic | 75.0% | |
| GCTGCGGCGACGACGGAGAG+GGG | + | chr6.3:4346789-4346808 | None:intergenic | 75.0% | |
| GTGCTGCGGCGACGACGGAG+AGG | + | chr6.3:4346791-4346810 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 4346737 | 4351924 | 4346737 | ID=MS.gene20602 |
| chr6.3 | mRNA | 4346737 | 4351924 | 4346737 | ID=MS.gene20602.t1;Parent=MS.gene20602 |
| chr6.3 | exon | 4351828 | 4351924 | 4351828 | ID=MS.gene20602.t1.exon1;Parent=MS.gene20602.t1 |
| chr6.3 | CDS | 4351828 | 4351924 | 4351828 | ID=cds.MS.gene20602.t1;Parent=MS.gene20602.t1 |
| chr6.3 | exon | 4349895 | 4350007 | 4349895 | ID=MS.gene20602.t1.exon2;Parent=MS.gene20602.t1 |
| chr6.3 | CDS | 4349895 | 4350007 | 4349895 | ID=cds.MS.gene20602.t1;Parent=MS.gene20602.t1 |
| chr6.3 | exon | 4347928 | 4347977 | 4347928 | ID=MS.gene20602.t1.exon3;Parent=MS.gene20602.t1 |
| chr6.3 | CDS | 4347928 | 4347977 | 4347928 | ID=cds.MS.gene20602.t1;Parent=MS.gene20602.t1 |
| chr6.3 | exon | 4347524 | 4347595 | 4347524 | ID=MS.gene20602.t1.exon4;Parent=MS.gene20602.t1 |
| chr6.3 | CDS | 4347524 | 4347595 | 4347524 | ID=cds.MS.gene20602.t1;Parent=MS.gene20602.t1 |
| chr6.3 | exon | 4346907 | 4346967 | 4346907 | ID=MS.gene20602.t1.exon5;Parent=MS.gene20602.t1 |
| chr6.3 | CDS | 4346907 | 4346967 | 4346907 | ID=cds.MS.gene20602.t1;Parent=MS.gene20602.t1 |
| chr6.3 | exon | 4346737 | 4346781 | 4346737 | ID=MS.gene20602.t1.exon6;Parent=MS.gene20602.t1 |
| chr6.3 | CDS | 4346737 | 4346781 | 4346737 | ID=cds.MS.gene20602.t1;Parent=MS.gene20602.t1 |
| Gene Sequence |
| Protein sequence |
