Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24017.t1 | RHN79957.1 | 95.6 | 366 | 14 | 1 | 1 | 364 | 101 | 466 | 5.50E-194 | 686.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24017.t1 | P32143 | 24.1 | 345 | 194 | 7 | 13 | 352 | 4 | 285 | 1.1e-12 | 75.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24017.t1 | A0A072VM08 | 95.6 | 366 | 14 | 1 | 1 | 364 | 127 | 492 | 3.9e-194 | 686.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene24017 | 0.841587 | 4.34E-58 | -1.69E-46 |
| MS.gene049173 | MS.gene24017 | 0.842103 | 3.17E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene24017 | 0.899439 | 1.98E-77 | -1.69E-46 |
| MS.gene049222 | MS.gene24017 | 0.874392 | 7.00E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene24017 | 0.807706 | 4.43E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene24017 | 0.891355 | 4.28E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene24017 | 0.861322 | 1.11E-63 | -1.69E-46 |
| MS.gene049427 | MS.gene24017 | 0.803975 | 2.70E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene24017 | 0.824628 | 7.28E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene24017 | 0.835856 | 1.32E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene24017 | 0.837421 | 5.25E-57 | -1.69E-46 |
| MS.gene049828 | MS.gene24017 | 0.819398 | 1.19E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene24017 | 0.83139 | 1.72E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene24017 | 0.893898 | 4.09E-75 | -1.69E-46 |
| MS.gene050165 | MS.gene24017 | 0.893233 | 7.60E-75 | -1.69E-46 |
| MS.gene050333 | MS.gene24017 | 0.901417 | 2.74E-78 | -1.69E-46 |
| MS.gene050353 | MS.gene24017 | -0.838768 | 2.36E-57 | -1.69E-46 |
| MS.gene050444 | MS.gene24017 | 0.841468 | 4.67E-58 | -1.69E-46 |
| MS.gene050475 | MS.gene24017 | -0.81037 | 1.19E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene24017 | 0.865607 | 5.22E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene24017 | 0.861322 | 1.11E-63 | -1.69E-46 |
| MS.gene050541 | MS.gene24017 | -0.803983 | 2.69E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene24017 | 0.808388 | 3.17E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene24017 | 0.855445 | 6.28E-62 | -1.69E-46 |
| MS.gene050675 | MS.gene24017 | 0.84104 | 6.05E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene24017 | 0.84752 | 1.10E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene24017 | 0.812755 | 3.61E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene24017 | 0.847219 | 1.33E-59 | -1.69E-46 |
| MS.gene050770 | MS.gene24017 | 0.851828 | 6.88E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene24017 | 0.870797 | 1.11E-66 | -1.69E-46 |
| MS.gene050876 | MS.gene24017 | 0.815183 | 1.05E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene24017 | 0.800635 | 1.31E-48 | -1.69E-46 |
| MS.gene050986 | MS.gene24017 | 0.834594 | 2.74E-56 | -1.69E-46 |
| MS.gene05100 | MS.gene24017 | 0.848639 | 5.39E-60 | -1.69E-46 |
| MS.gene051228 | MS.gene24017 | 0.862895 | 3.67E-64 | -1.69E-46 |
| MS.gene051317 | MS.gene24017 | 0.810283 | 1.24E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene24017 | 0.808729 | 2.68E-50 | -1.69E-46 |
| MS.gene051434 | MS.gene24017 | 0.813014 | 3.17E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene24017 | 0.816401 | 5.64E-52 | -1.69E-46 |
| MS.gene051564 | MS.gene24017 | 0.811621 | 6.39E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene24017 | 0.822357 | 2.47E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene24017 | 0.801056 | 1.08E-48 | -1.69E-46 |
| MS.gene051694 | MS.gene24017 | 0.845053 | 5.16E-59 | -1.69E-46 |
| MS.gene051810 | MS.gene24017 | 0.87449 | 6.48E-68 | -1.69E-46 |
| MS.gene051858 | MS.gene24017 | 0.867281 | 1.54E-65 | -1.69E-46 |
| MS.gene051949 | MS.gene24017 | 0.85871 | 6.83E-63 | -1.69E-46 |
| MS.gene052271 | MS.gene24017 | 0.883026 | 6.36E-71 | -1.69E-46 |
| MS.gene052290 | MS.gene24017 | 0.808015 | 3.81E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene24017 | 0.892837 | 1.10E-74 | -1.69E-46 |
| MS.gene052484 | MS.gene24017 | 0.819487 | 1.13E-52 | -1.69E-46 |
| MS.gene052605 | MS.gene24017 | 0.803532 | 3.33E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene24017 | 0.823025 | 1.73E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene24017 | 0.82576 | 3.93E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene24017 | 0.813803 | 2.13E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene24017 | 0.809145 | 2.19E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene24017 | 0.814013 | 1.91E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene24017 | 0.813643 | 2.31E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene24017 | 0.820346 | 7.20E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene24017 | 0.831233 | 1.88E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene24017 | 0.843639 | 1.24E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene24017 | 0.877899 | 4.34E-69 | -1.69E-46 |
| MS.gene053286 | MS.gene24017 | 0.87113 | 8.64E-67 | -1.69E-46 |
| MS.gene053322 | MS.gene24017 | 0.87094 | 9.98E-67 | -1.69E-46 |
| MS.gene053384 | MS.gene24017 | 0.811485 | 6.84E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene24017 | 0.80698 | 6.32E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene24017 | 0.866749 | 2.27E-65 | -1.69E-46 |
| MS.gene053824 | MS.gene24017 | 0.822691 | 2.07E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene24017 | 0.827102 | 1.88E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene24017 | 0.820949 | 5.23E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene24017 | 0.810883 | 9.24E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene24017 | 0.864608 | 1.08E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene24017 | 0.888208 | 7.24E-73 | -1.69E-46 |
| MS.gene054802 | MS.gene24017 | 0.840736 | 7.27E-58 | -1.69E-46 |
| MS.gene054803 | MS.gene24017 | 0.841176 | 5.57E-58 | -1.69E-46 |
| MS.gene054804 | MS.gene24017 | 0.842676 | 2.24E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene24017 | 0.857036 | 2.15E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene24017 | 0.821115 | 4.79E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene24017 | 0.848588 | 5.57E-60 | -1.69E-46 |
| MS.gene055212 | MS.gene24017 | 0.829717 | 4.40E-55 | -1.69E-46 |
| MS.gene055254 | MS.gene24017 | 0.812341 | 4.45E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene24017 | 0.866994 | 1.90E-65 | -1.69E-46 |
| MS.gene055397 | MS.gene24017 | 0.83891 | 2.17E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene24017 | 0.876023 | 1.94E-68 | -1.69E-46 |
| MS.gene055502 | MS.gene24017 | 0.874366 | 7.14E-68 | -1.69E-46 |
| MS.gene055577 | MS.gene24017 | 0.842009 | 3.36E-58 | -1.69E-46 |
| MS.gene055634 | MS.gene24017 | 0.858328 | 8.88E-63 | -1.69E-46 |
| MS.gene055636 | MS.gene24017 | 0.905603 | 3.61E-80 | -1.69E-46 |
| MS.gene055638 | MS.gene24017 | 0.912303 | 2.27E-83 | -1.69E-46 |
| MS.gene055647 | MS.gene24017 | 0.854257 | 1.39E-61 | -1.69E-46 |
| MS.gene055722 | MS.gene24017 | 0.847937 | 8.43E-60 | -1.69E-46 |
| MS.gene05592 | MS.gene24017 | 0.867345 | 1.47E-65 | -1.69E-46 |
| MS.gene055941 | MS.gene24017 | 0.865312 | 6.47E-65 | -1.69E-46 |
| MS.gene055956 | MS.gene24017 | -0.819723 | 1.00E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene24017 | 0.828159 | 1.05E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene24017 | 0.854209 | 1.43E-61 | -1.69E-46 |
| MS.gene056449 | MS.gene24017 | 0.827716 | 1.34E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene24017 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene24017 | 0.804915 | 1.72E-49 | -1.69E-46 |
| MS.gene056510 | MS.gene24017 | 0.843362 | 1.47E-58 | -1.69E-46 |
| MS.gene056549 | MS.gene24017 | 0.843385 | 1.45E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene24017 | 0.884207 | 2.34E-71 | -1.69E-46 |
| MS.gene056692 | MS.gene24017 | 0.827567 | 1.46E-54 | -1.69E-46 |
| MS.gene056898 | MS.gene24017 | 0.823854 | 1.11E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene24017 | 0.810698 | 1.01E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene24017 | 0.887901 | 9.49E-73 | -1.69E-46 |
| MS.gene057146 | MS.gene24017 | 0.825915 | 3.61E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene24017 | 0.829741 | 4.34E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene24017 | 0.864562 | 1.11E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene24017 | 0.810473 | 1.13E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene24017 | 0.857322 | 1.77E-62 | -1.69E-46 |
| MS.gene058006 | MS.gene24017 | 0.811681 | 6.20E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene24017 | 0.829442 | 5.14E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene24017 | 0.831832 | 1.33E-55 | -1.69E-46 |
| MS.gene058335 | MS.gene24017 | 0.805086 | 1.58E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene24017 | 0.874786 | 5.14E-68 | -1.69E-46 |
| MS.gene058544 | MS.gene24017 | 0.811007 | 8.68E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene24017 | 0.830954 | 2.19E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene24017 | 0.889998 | 1.46E-73 | -1.69E-46 |
| MS.gene059022 | MS.gene24017 | 0.861928 | 7.27E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene24017 | 0.833412 | 5.41E-56 | -1.69E-46 |
| MS.gene059029 | MS.gene24017 | 0.913962 | 3.35E-84 | -1.69E-46 |
| MS.gene059079 | MS.gene24017 | 0.812472 | 4.17E-51 | -1.69E-46 |
| MS.gene05912 | MS.gene24017 | 0.805934 | 1.05E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene24017 | 0.827181 | 1.80E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene24017 | 0.836816 | 7.50E-57 | -1.69E-46 |
| MS.gene059536 | MS.gene24017 | 0.830014 | 3.73E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene24017 | 0.888326 | 6.52E-73 | -1.69E-46 |
| MS.gene059718 | MS.gene24017 | 0.866996 | 1.89E-65 | -1.69E-46 |
| MS.gene059756 | MS.gene24017 | 0.839881 | 1.21E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene24017 | 0.833566 | 4.95E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene24017 | 0.805631 | 1.22E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene24017 | 0.859248 | 4.72E-63 | -1.69E-46 |
| MS.gene059960 | MS.gene24017 | 0.873844 | 1.07E-67 | -1.69E-46 |
| MS.gene060193 | MS.gene24017 | 0.838861 | 2.24E-57 | -1.69E-46 |
| MS.gene060341 | MS.gene24017 | 0.815146 | 1.07E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene24017 | 0.846217 | 2.50E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene24017 | 0.855502 | 6.04E-62 | -1.69E-46 |
| MS.gene06077 | MS.gene24017 | 0.810587 | 1.07E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene24017 | 0.821361 | 4.21E-53 | -1.69E-46 |
| MS.gene060818 | MS.gene24017 | 0.849556 | 3.00E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene24017 | 0.83052 | 2.80E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene24017 | 0.821194 | 4.60E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene24017 | 0.847603 | 1.04E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene24017 | 0.855114 | 7.84E-62 | -1.69E-46 |
| MS.gene061171 | MS.gene24017 | 0.850627 | 1.50E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene24017 | 0.897086 | 1.98E-76 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24017.t1 | MTR_1g069320 | 95.628 | 366 | 14 | 1 | 1 | 364 | 127 | 492 | 0.0 | 711 |
| MS.gene24017.t1 | MTR_7g099270 | 73.626 | 364 | 96 | 0 | 1 | 364 | 1 | 364 | 0.0 | 567 |
| MS.gene24017.t1 | MTR_7g099280 | 66.201 | 358 | 121 | 0 | 6 | 363 | 53 | 410 | 5.06e-178 | 500 |
| MS.gene24017.t1 | MTR_7g099280 | 66.201 | 358 | 121 | 0 | 6 | 363 | 51 | 408 | 6.62e-178 | 500 |
| MS.gene24017.t1 | MTR_1g069325 | 65.833 | 360 | 123 | 0 | 5 | 364 | 9 | 368 | 3.84e-177 | 496 |
| MS.gene24017.t1 | MTR_7g099280 | 64.984 | 317 | 111 | 0 | 6 | 322 | 51 | 367 | 1.53e-152 | 434 |
| MS.gene24017.t1 | MTR_7g099280 | 58.659 | 358 | 111 | 1 | 6 | 363 | 61 | 381 | 1.83e-147 | 422 |
| MS.gene24017.t1 | MTR_1g069325 | 56.944 | 360 | 104 | 1 | 5 | 364 | 9 | 317 | 1.53e-141 | 404 |
| MS.gene24017.t1 | MTR_7g099280 | 65.672 | 268 | 92 | 0 | 6 | 273 | 51 | 318 | 7.60e-127 | 368 |
| MS.gene24017.t1 | MTR_7g099280 | 65.504 | 258 | 89 | 0 | 6 | 263 | 51 | 308 | 2.67e-122 | 355 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24017.t1 | AT4G28706 | 67.042 | 355 | 117 | 0 | 9 | 363 | 46 | 400 | 0.0 | 512 |
| MS.gene24017.t1 | AT4G28706 | 67.042 | 355 | 117 | 0 | 9 | 363 | 48 | 402 | 0.0 | 511 |
| MS.gene24017.t1 | AT4G28706 | 67.135 | 356 | 116 | 1 | 9 | 363 | 48 | 403 | 0.0 | 511 |
| MS.gene24017.t1 | AT4G28706 | 67.135 | 356 | 116 | 1 | 9 | 363 | 48 | 403 | 0.0 | 509 |
| MS.gene24017.t1 | AT5G43910 | 54.670 | 364 | 159 | 3 | 2 | 363 | 4 | 363 | 2.31e-140 | 403 |
| MS.gene24017.t1 | AT5G43910 | 54.769 | 325 | 141 | 3 | 2 | 324 | 4 | 324 | 6.77e-123 | 357 |
| MS.gene24017.t1 | AT5G43910 | 53.957 | 278 | 126 | 2 | 2 | 277 | 4 | 281 | 1.07e-104 | 310 |
| MS.gene24017.t1 | AT5G43910 | 54.745 | 274 | 122 | 2 | 2 | 273 | 4 | 277 | 1.10e-104 | 310 |
| MS.gene24017.t1 | AT5G43910 | 54.745 | 274 | 122 | 2 | 2 | 273 | 4 | 277 | 1.57e-104 | 309 |
Find 103 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACGTTGGGTAACCTTAAA+AGG | 0.186047 | 1.3:+48689177 | None:intergenic |
| AAAATTTGTGGCTGTAACTT+TGG | 0.249227 | 1.3:-48689156 | MS.gene24017:CDS |
| ATCAGTCACCGTCGATTTCT+TGG | 0.299106 | 1.3:-48692880 | MS.gene24017:CDS |
| GGTGCCGGGGATGCATTTAT+TGG | 0.310291 | 1.3:-48688364 | MS.gene24017:CDS |
| CCAGTCAGTGGCAAAATTAA+AGG | 0.324818 | 1.3:-48688470 | MS.gene24017:intron |
| GGTGGATGTAGACAACTTAT+TGG | 0.326212 | 1.3:-48688984 | MS.gene24017:CDS |
| CAACATAATCAGCTAATTTC+AGG | 0.326463 | 1.3:+48689755 | None:intergenic |
| TTAACCTGCCTTGCTCGTTT+AGG | 0.328379 | 1.3:-48692461 | MS.gene24017:CDS |
| AAACACAAGGCTCGTTTCTA+AGG | 0.332845 | 1.3:-48692435 | MS.gene24017:intron |
| AACTCGATTCTGAAAGATCT+TGG | 0.350613 | 1.3:+48690618 | None:intergenic |
| AAATTTGTGGCTGTAACTTT+GGG | 0.365260 | 1.3:-48689155 | MS.gene24017:CDS |
| TTTATTGGATCTGTGATCTA+TGG | 0.367712 | 1.3:-48688349 | MS.gene24017:intron |
| TCATCTAATATGCCCCTGCC+TGG | 0.371108 | 1.3:+48691991 | None:intergenic |
| CTGGAAAATCTACTGAATAA+AGG | 0.373453 | 1.3:+48687829 | None:intergenic |
| GAAGGAATAGGAACGGTTAT+CGG | 0.380834 | 1.3:-48688445 | MS.gene24017:CDS |
| ACTCGATTCTGAAAGATCTT+GGG | 0.390681 | 1.3:+48690619 | None:intergenic |
| GAAAGATCTTGGGGTATCAT+TGG | 0.390891 | 1.3:+48690629 | None:intergenic |
| ATCGAGTTTGTTATCTGCAT+TGG | 0.395357 | 1.3:-48690603 | MS.gene24017:CDS |
| CCTTTCTGCATCAATTAAGA+TGG | 0.396655 | 1.3:+48689801 | None:intergenic |
| GGTGCCAAGTGCAGAGATCT+AGG | 0.414691 | 1.3:-48687896 | MS.gene24017:CDS |
| AAGGCAGGTTAAAGCATTGC+CGG | 0.419139 | 1.3:+48692472 | None:intergenic |
| AATCAGAACAACCACTTTGA+AGG | 0.420228 | 1.3:-48692823 | MS.gene24017:intron |
| CGCACAACGGTGGCGCTTTG+AGG | 0.441473 | 1.3:+48692995 | None:intergenic |
| AGCTGAGAGCATTCCGCCCT+CGG | 0.443652 | 1.3:-48688404 | MS.gene24017:CDS |
| GGTATCATTGGAGGATATCC+AGG | 0.445056 | 1.3:+48690641 | None:intergenic |
| AAATTAAAGGCAGAAGGAAT+AGG | 0.458558 | 1.3:-48688457 | MS.gene24017:CDS |
| GTTACCCAACGTAAAATTTG+TGG | 0.460980 | 1.3:-48689168 | MS.gene24017:CDS |
| AGGCGTGGGTCTGCGCGGTA+TGG | 0.464792 | 1.3:+48687857 | None:intergenic |
| GTGCTTATGCAGGTGGGTTG+CGG | 0.466739 | 1.3:-48692903 | MS.gene24017:intron |
| CTTGTTGATACCACTGGTGC+CGG | 0.467767 | 1.3:-48688379 | MS.gene24017:CDS |
| TCCACAATAATGTACGTAAA+CGG | 0.467777 | 1.3:+48691459 | None:intergenic |
| AAGGAATAGGAACGGTTATC+GGG | 0.482979 | 1.3:-48688444 | MS.gene24017:CDS |
| TTGCATTACCGATGATATGC+AGG | 0.482989 | 1.3:+48688919 | None:intergenic |
| TTGCGGATGACAGCCCAGGC+AGG | 0.492500 | 1.3:-48692005 | MS.gene24017:CDS |
| TTGTTGATACCACTGGTGCC+GGG | 0.498753 | 1.3:-48688378 | MS.gene24017:CDS |
| TGCGGATGACAGCCCAGGCA+GGG | 0.505235 | 1.3:-48692004 | MS.gene24017:CDS |
| TTATTTGCAGGTATCTAAAG+AGG | 0.508769 | 1.3:-48691490 | MS.gene24017:intron |
| TAGACCTAAACGAGCAAGGC+AGG | 0.509005 | 1.3:+48692457 | None:intergenic |
| AGACAACTTATTGGAATCGC+TGG | 0.516469 | 1.3:-48688975 | MS.gene24017:CDS |
| TCGGAGCTTGTTGATACCAC+TGG | 0.518281 | 1.3:-48688385 | MS.gene24017:CDS |
| GCGGATGACAGCCCAGGCAG+GGG | 0.519058 | 1.3:-48692003 | MS.gene24017:CDS |
| CATCTAATATGCCCCTGCCT+GGG | 0.522457 | 1.3:+48691992 | None:intergenic |
| TAGATTGCGGATGACAGCCC+AGG | 0.525196 | 1.3:-48692009 | MS.gene24017:CDS |
| GCAAAGGGTAGCATTGTCTC+TGG | 0.526457 | 1.3:+48688171 | None:intergenic |
| CTTTCTGCATCAATTAAGAT+GGG | 0.529991 | 1.3:+48689802 | None:intergenic |
| CTCGTTTAGGTCTAAACACA+AGG | 0.531596 | 1.3:-48692448 | MS.gene24017:CDS |
| TAATTGATGCAGAAAGGCCA+AGG | 0.534906 | 1.3:-48689795 | MS.gene24017:CDS |
| GTTCAAGGAGGTGGTAATGC+CGG | 0.539538 | 1.3:-48692491 | MS.gene24017:CDS |
| AGATCATCTAACCCTTCCCT+TGG | 0.542681 | 1.3:+48689778 | None:intergenic |
| TGCTCCTAGATCTCTGCACT+TGG | 0.543238 | 1.3:+48687892 | None:intergenic |
| AACGGTGGCGCTTTGAGGAA+CGG | 0.543705 | 1.3:+48693000 | None:intergenic |
| CGAACTTGTATACATACCCC+TGG | 0.546807 | 1.3:-48690659 | MS.gene24017:CDS |
| TCTACTGAATAAAGGACGCT+AGG | 0.547805 | 1.3:+48687837 | None:intergenic |
| ACATACCACATTAGCAGCAA+AGG | 0.549212 | 1.3:+48688155 | None:intergenic |
| AGTTTGTTATCTGCATTGGA+TGG | 0.549990 | 1.3:-48690599 | MS.gene24017:CDS |
| CTCGATTCTGAAAGATCTTG+GGG | 0.550007 | 1.3:+48690620 | None:intergenic |
| GCTGTAACTTTGGGAAAAGA+TGG | 0.551573 | 1.3:-48689146 | MS.gene24017:CDS |
| GGCGCTTTGAGGAACGGAGG+AGG | 0.552389 | 1.3:+48693006 | None:intergenic |
| GGAATCGCTGGAGTTAAGAA+AGG | 0.553449 | 1.3:-48688963 | MS.gene24017:CDS |
| ACCGTTTACGTACATTATTG+TGG | 0.557011 | 1.3:-48691460 | MS.gene24017:CDS |
| CCATCTTAATTGATGCAGAA+AGG | 0.560154 | 1.3:-48689801 | MS.gene24017:CDS |
| AGGATAGAAACAAGCGCTCG+CGG | 0.560505 | 1.3:+48689197 | None:intergenic |
| CATACCACATTAGCAGCAAA+GGG | 0.560550 | 1.3:+48688156 | None:intergenic |
| GCTACCCTTTGCTGCTAATG+TGG | 0.565502 | 1.3:-48688160 | MS.gene24017:intron |
| ACATCCACCTCTTCTGTGGT+AGG | 0.565690 | 1.3:+48688998 | None:intergenic |
| AGATCCAATAAATGCATCCC+CGG | 0.570608 | 1.3:+48688360 | None:intergenic |
| GTCTACATCCACCTCTTCTG+TGG | 0.570769 | 1.3:+48688994 | None:intergenic |
| TGAATAAAGGACGCTAGGCG+TGG | 0.574504 | 1.3:+48687842 | None:intergenic |
| GTGGCAAAATTAAAGGCAGA+AGG | 0.575500 | 1.3:-48688463 | MS.gene24017:CDS |
| AGATCTTGGGGTATCATTGG+AGG | 0.580008 | 1.3:+48690632 | None:intergenic |
| ATGCAGAAAGGCCAAGGGAA+GGG | 0.586552 | 1.3:-48689789 | MS.gene24017:CDS |
| AAATGCATCCCCGGCACCAG+TGG | 0.595424 | 1.3:+48688369 | None:intergenic |
| AATTCCAACCTGCATATCAT+CGG | 0.597038 | 1.3:-48688927 | MS.gene24017:intron |
| TGCTCTAGTTGTTGCCCACG+AGG | 0.599306 | 1.3:-48690537 | MS.gene24017:intron |
| TTTATAGGTGATAACCTCGT+GGG | 0.604370 | 1.3:+48690523 | None:intergenic |
| GTGGTATCAACAAGCTCCGA+GGG | 0.610523 | 1.3:+48688388 | None:intergenic |
| TGTTTAGACCTAAACGAGCA+AGG | 0.611501 | 1.3:+48692453 | None:intergenic |
| TATTTGCAGGTATCTAAAGA+GGG | 0.612549 | 1.3:-48691489 | MS.gene24017:intron |
| GAATAAAGGACGCTAGGCGT+GGG | 0.613508 | 1.3:+48687843 | None:intergenic |
| ATTACCGATGATATGCAGGT+TGG | 0.615097 | 1.3:+48688923 | None:intergenic |
| GATGCAGAAAGGCCAAGGGA+AGG | 0.616991 | 1.3:-48689790 | MS.gene24017:CDS |
| TTAGATGAGCTACAGACTGA+TGG | 0.621642 | 1.3:-48691976 | MS.gene24017:CDS |
| AGCAAGTCCTACCACAGAAG+AGG | 0.623266 | 1.3:-48689005 | MS.gene24017:CDS |
| TTGCTGACAGGCATGGACAG+AGG | 0.624956 | 1.3:-48689231 | MS.gene24017:intron |
| AAGTCCTACCACAGAAGAGG+TGG | 0.625523 | 1.3:-48689002 | MS.gene24017:CDS |
| ATGCTCAGCTAAGTTTCCAA+AGG | 0.628024 | 1.3:-48689731 | MS.gene24017:intron |
| GAGAGGGAAACGCACAACGG+TGG | 0.647307 | 1.3:+48692985 | None:intergenic |
| AAAGGAAGCAACCTTCAAAG+TGG | 0.648978 | 1.3:+48692812 | None:intergenic |
| GTATCATTGGAGGATATCCA+GGG | 0.655895 | 1.3:+48690642 | None:intergenic |
| TGTTGATACCACTGGTGCCG+GGG | 0.657221 | 1.3:-48688377 | MS.gene24017:CDS |
| TGGCTTAGGATAAGCAGCAA+CGG | 0.657813 | 1.3:+48692854 | None:intergenic |
| AAAGGCAGAAGGAATAGGAA+CGG | 0.658683 | 1.3:-48688452 | MS.gene24017:CDS |
| TGAGCTACAGACTGATGGCG+TGG | 0.660123 | 1.3:-48691971 | MS.gene24017:CDS |
| ACGCTAGGCGTGGGTCTGCG+CGG | 0.665905 | 1.3:+48687852 | None:intergenic |
| AATTGATGCAGAAAGGCCAA+GGG | 0.667892 | 1.3:-48689794 | MS.gene24017:CDS |
| CTGCTCGAGAGAAGTGTCAG+TGG | 0.668499 | 1.3:-48689116 | MS.gene24017:intron |
| AACGGTAGCCAAGAAATCGA+CGG | 0.675256 | 1.3:+48692872 | None:intergenic |
| GTATCAACAAGCTCCGAGGG+CGG | 0.694955 | 1.3:+48688391 | None:intergenic |
| AGTGGTATCAACAAGCTCCG+AGG | 0.709683 | 1.3:+48688387 | None:intergenic |
| GGTGGCGCTTTGAGGAACGG+AGG | 0.717893 | 1.3:+48693003 | None:intergenic |
| GTTATCGGGAAACTATACAT+CGG | 0.739368 | 1.3:-48688430 | MS.gene24017:CDS |
| TATCATTGGAGGATATCCAG+GGG | 0.762329 | 1.3:+48690643 | None:intergenic |
| AGAGATCTAGGAGCACGAAG+CGG | 0.771967 | 1.3:-48687884 | MS.gene24017:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGTAAAATGTTTATATT+TGG | - | chr1.3:48688139-48688158 | MS.gene24017:intron | 10.0% |
| !! | TATTAGTATTAATAAAAAGT+TGG | + | chr1.3:48690465-48690484 | None:intergenic | 10.0% |
| !! | TTAAATAAACTGAATAAAAT+AGG | - | chr1.3:48688746-48688765 | MS.gene24017:intron | 10.0% |
| !!! | AATTATTTAGTTTTAATTTC+TGG | - | chr1.3:48688478-48688497 | MS.gene24017:intron | 10.0% |
| !!! | ATCTAAAATTCAAAAAATTA+GGG | + | chr1.3:48691497-48691516 | None:intergenic | 10.0% |
| !!! | ATTTTTTTCAGTAAAAAAAA+TGG | + | chr1.3:48691530-48691549 | None:intergenic | 10.0% |
| !!! | TATCTAAAATTCAAAAAATT+AGG | + | chr1.3:48691498-48691517 | None:intergenic | 10.0% |
| !!! | TATTAATACTTTTTTTTTTG+TGG | - | chr1.3:48689326-48689345 | MS.gene24017:intron | 10.0% |
| !! | AAGTATTAATAAAATAGTAG+AGG | + | chr1.3:48689317-48689336 | None:intergenic | 15.0% |
| !! | AATTCTGATGTTAATTATAA+GGG | - | chr1.3:48690361-48690380 | MS.gene24017:intron | 15.0% |
| !! | AGAATTAAAATTAATTAGTG+GGG | - | chr1.3:48689274-48689293 | MS.gene24017:intron | 15.0% |
| !! | GAGAATTAAAATTAATTAGT+GGG | - | chr1.3:48689273-48689292 | MS.gene24017:intron | 15.0% |
| !! | GTAAGAAATATATAATACTA+TGG | - | chr1.3:48691173-48691192 | MS.gene24017:intron | 15.0% |
| !!! | ATCTTACATAATTGATATTT+TGG | + | chr1.3:48692185-48692204 | None:intergenic | 15.0% |
| !!! | TAATTAATTTTAATTCTCGA+TGG | + | chr1.3:48689271-48689290 | None:intergenic | 15.0% |
| !!! | TTTGTTATATTTTTCTCTTA+TGG | - | chr1.3:48692537-48692556 | MS.gene24017:intron | 15.0% |
| !! | AATCGAAATGTAGTTAATTA+AGG | - | chr1.3:48689222-48689241 | MS.gene24017:CDS | 20.0% |
| !! | ATCATGTAACAATTTCTTAT+AGG | + | chr1.3:48690746-48690765 | None:intergenic | 20.0% |
| !! | ATGTTTATTTGATAAAATCC+TGG | + | chr1.3:48690414-48690433 | None:intergenic | 20.0% |
| !! | CAATTCTGATGTTAATTATA+AGG | - | chr1.3:48690360-48690379 | MS.gene24017:intron | 20.0% |
| !! | CATAAAAAAACCTCAAAATT+TGG | + | chr1.3:48687907-48687926 | None:intergenic | 20.0% |
| !! | CGAGAATTAAAATTAATTAG+TGG | - | chr1.3:48689272-48689291 | MS.gene24017:intron | 20.0% |
| !! | GAATTGCAAGTAAAATTTAT+AGG | + | chr1.3:48690346-48690365 | None:intergenic | 20.0% |
| !! | GTATATTAAAACATAGAGAA+TGG | + | chr1.3:48692064-48692083 | None:intergenic | 20.0% |
| !!! | AAAAAGCTTATGCATTTTAA+TGG | - | chr1.3:48692920-48692939 | MS.gene24017:intron | 20.0% |
| !!! | AAAAGCTTATGCATTTTAAT+GGG | - | chr1.3:48692921-48692940 | MS.gene24017:intron | 20.0% |
| !!! | ATATTTAATTGATAACCCTT+GGG | + | chr1.3:48689193-48689212 | None:intergenic | 20.0% |
| !!! | ATTATGCATTTGTAATTTTC+AGG | - | chr1.3:48688338-48688357 | MS.gene24017:intron | 20.0% |
| !!! | TTATTTTCTTTTGCTTGTAA+AGG | - | chr1.3:48690935-48690954 | MS.gene24017:intron | 20.0% |
| !!! | TTTGATTTCTAAATATGACT+GGG | + | chr1.3:48690387-48690406 | None:intergenic | 20.0% |
| !!! | TTTTTGCATAATAAACTCAA+GGG | + | chr1.3:48690886-48690905 | None:intergenic | 20.0% |
| ! | AAAAAAACCTCAAAATTTGG+CGG | + | chr1.3:48687904-48687923 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGAACGAATGTT+AGG | + | chr1.3:48690678-48690697 | None:intergenic | 25.0% |
| ! | AAATTATACTTCGAATCAGT+TGG | + | chr1.3:48689170-48689189 | None:intergenic | 25.0% |
| ! | AAGAAAAAGAACGAATGTTA+GGG | + | chr1.3:48690677-48690696 | None:intergenic | 25.0% |
| ! | AATATGCTGAAAACAACTTA+TGG | - | chr1.3:48688665-48688684 | MS.gene24017:intron | 25.0% |
| ! | AATTCTTCACCAAAAACATA+AGG | + | chr1.3:48690777-48690796 | None:intergenic | 25.0% |
| ! | AATTTATGTATTGAACCTGT+TGG | - | chr1.3:48692877-48692896 | MS.gene24017:CDS | 25.0% |
| ! | ACTCATATAGGATATATTGT+AGG | + | chr1.3:48690077-48690096 | None:intergenic | 25.0% |
| ! | ACTTGAATCATTCTAAGTTA+AGG | - | chr1.3:48689761-48689780 | MS.gene24017:CDS | 25.0% |
| ! | ATATGATGTCTTAAATGACT+TGG | - | chr1.3:48691302-48691321 | MS.gene24017:intron | 25.0% |
| ! | ATCTAAATTTCAAAAGAGAG+GGG | - | chr1.3:48689486-48689505 | MS.gene24017:intron | 25.0% |
| ! | CATCATTATACACTAACATA+TGG | + | chr1.3:48692767-48692786 | None:intergenic | 25.0% |
| ! | CTTGAATCATTCTAAGTTAA+GGG | - | chr1.3:48689762-48689781 | MS.gene24017:CDS | 25.0% |
| ! | GATCTAAATTTCAAAAGAGA+GGG | - | chr1.3:48689485-48689504 | MS.gene24017:intron | 25.0% |
| ! | GTGAAGAATTTCAAAATTCT+AGG | - | chr1.3:48690787-48690806 | MS.gene24017:intron | 25.0% |
| ! | TCTAGGAAATTGAAATTACA+GGG | - | chr1.3:48690804-48690823 | MS.gene24017:intron | 25.0% |
| ! | TGATCTAAATTTCAAAAGAG+AGG | - | chr1.3:48689484-48689503 | MS.gene24017:intron | 25.0% |
| ! | TTATACTAAATCGCATATCA+CGG | - | chr1.3:48689926-48689945 | MS.gene24017:intron | 25.0% |
| ! | TTGAATCATTCTAAGTTAAG+GGG | - | chr1.3:48689763-48689782 | MS.gene24017:CDS | 25.0% |
| ! | TTTATAAGCACTTAAACAAG+TGG | + | chr1.3:48688542-48688561 | None:intergenic | 25.0% |
| !! | AAGCTATATTCTTTTTGTTG+TGG | - | chr1.3:48691406-48691425 | MS.gene24017:intron | 25.0% |
| !! | ACAACTTAACATGTATTTTG+GGG | + | chr1.3:48691362-48691381 | None:intergenic | 25.0% |
| !! | ATGTAATCTAAAATCCATAG+TGG | - | chr1.3:48690599-48690618 | MS.gene24017:CDS | 25.0% |
| !! | CACAACTTAACATGTATTTT+GGG | + | chr1.3:48691363-48691382 | None:intergenic | 25.0% |
| !! | CATATTTAATTGATAACCCT+TGG | + | chr1.3:48689194-48689213 | None:intergenic | 25.0% |
| !! | CTTTGATTTCTAAATATGAC+TGG | + | chr1.3:48690388-48690407 | None:intergenic | 25.0% |
| !! | GAAATTTGGTTTATTGCATT+TGG | - | chr1.3:48688976-48688995 | MS.gene24017:CDS | 25.0% |
| !! | GTTTTTGCATAATAAACTCA+AGG | + | chr1.3:48690887-48690906 | None:intergenic | 25.0% |
| !! | TACATCTTTTATTGTGGTAA+TGG | - | chr1.3:48688904-48688923 | MS.gene24017:intron | 25.0% |
| !! | TCACAACTTAACATGTATTT+TGG | + | chr1.3:48691364-48691383 | None:intergenic | 25.0% |
| !! | TTCTAGGAAATTGAAATTAC+AGG | - | chr1.3:48690803-48690822 | MS.gene24017:intron | 25.0% |
| !! | TTTAATCATTTGACCTTTTC+TGG | - | chr1.3:48691822-48691841 | MS.gene24017:intron | 25.0% |
| !!! | AAAGCTTATGCATTTTAATG+GGG | - | chr1.3:48692922-48692941 | MS.gene24017:intron | 25.0% |
| !!! | AAGAAAAGACTAGTTTTTTG+TGG | - | chr1.3:48691330-48691349 | MS.gene24017:intron | 25.0% |
| !!! | AAGGGAATGTAATTTTTTTG+AGG | + | chr1.3:48690868-48690887 | None:intergenic | 25.0% |
| !!! | AATGGTCATTTTCTTACATA+TGG | - | chr1.3:48689426-48689445 | MS.gene24017:intron | 25.0% |
| !!! | ATTATTTTTACTCTTCTCTG+TGG | - | chr1.3:48691548-48691567 | MS.gene24017:intron | 25.0% |
| !!! | ATTTGTAATTTTCAGGTTCA+AGG | - | chr1.3:48688345-48688364 | MS.gene24017:intron | 25.0% |
| !!! | TATAAAGTGTTGTCAAACAA+AGG | + | chr1.3:48689911-48689930 | None:intergenic | 25.0% |
| !!! | TTATTTTTACTCTTCTCTGT+GGG | - | chr1.3:48691549-48691568 | MS.gene24017:intron | 25.0% |
| AAAAAACCTCAAAATTTGGC+GGG | + | chr1.3:48687903-48687922 | None:intergenic | 30.0% | |
| AAAAACAATGCATTCACCTT+TGG | + | chr1.3:48691139-48691158 | None:intergenic | 30.0% | |
| AAAATACTGAGATTTGAGAG+TGG | + | chr1.3:48689133-48689152 | None:intergenic | 30.0% | |
| AAAATTAATTAGTGGGGTTC+TGG | - | chr1.3:48689280-48689299 | MS.gene24017:intron | 30.0% | |
| AAAATTTGTGGCTGTAACTT+TGG | - | chr1.3:48691695-48691714 | MS.gene24017:intron | 30.0% | |
| AAATGATTCATAAAACACCC+TGG | + | chr1.3:48690837-48690856 | None:intergenic | 30.0% | |
| AAATTAAAGGCAGAAGGAAT+AGG | - | chr1.3:48692394-48692413 | MS.gene24017:intron | 30.0% | |
| AAATTTGTGGCTGTAACTTT+GGG | - | chr1.3:48691696-48691715 | MS.gene24017:intron | 30.0% | |
| AAGCTAGTATAGTGCATATT+TGG | - | chr1.3:48688080-48688099 | MS.gene24017:intron | 30.0% | |
| AAGTAGTTAGAATGAGTCAA+AGG | + | chr1.3:48690159-48690178 | None:intergenic | 30.0% | |
| AATAAAATAGTAGAGGCCAT+TGG | + | chr1.3:48689310-48689329 | None:intergenic | 30.0% | |
| AATGCACTTAGCATACATAA+TGG | + | chr1.3:48690703-48690722 | None:intergenic | 30.0% | |
| ACAATGGTTTCAAAAAACTC+AGG | + | chr1.3:48688786-48688805 | None:intergenic | 30.0% | |
| ACACTGTATTTGTCCAAAAA+AGG | + | chr1.3:48692117-48692136 | None:intergenic | 30.0% | |
| AGTAGTTAGAATGAGTCAAA+GGG | + | chr1.3:48690158-48690177 | None:intergenic | 30.0% | |
| ATTAAAACATAGAGAATGGC+AGG | + | chr1.3:48692060-48692079 | None:intergenic | 30.0% | |
| ATTAAATAAGCAATGTCGAG+AGG | + | chr1.3:48688461-48688480 | None:intergenic | 30.0% | |
| ATTAACGTCTAGTAGAGATT+AGG | + | chr1.3:48692144-48692163 | None:intergenic | 30.0% | |
| ATTCGAAGTATAATTTCCCA+AGG | - | chr1.3:48689174-48689193 | MS.gene24017:CDS | 30.0% | |
| CAACATAATCAGCTAATTTC+AGG | + | chr1.3:48691099-48691118 | None:intergenic | 30.0% | |
| CACTTAAACAAGTGGTTTAT+CGG | + | chr1.3:48688534-48688553 | None:intergenic | 30.0% | |
| CATTTATGCACATGTAAACA+AGG | + | chr1.3:48691209-48691228 | None:intergenic | 30.0% | |
| CTATACACACGATACAAATT+AGG | + | chr1.3:48692847-48692866 | None:intergenic | 30.0% | |
| CTTTCTGCATCAATTAAGAT+GGG | + | chr1.3:48691052-48691071 | None:intergenic | 30.0% | |
| GTATGTGTAGATATGATTGT+GGG | - | chr1.3:48691757-48691776 | MS.gene24017:intron | 30.0% | |
| TAAATAGTACATTTACTGCC+TGG | + | chr1.3:48691271-48691290 | None:intergenic | 30.0% | |
| TAATTCAGTGTTGTCAATTG+TGG | - | chr1.3:48689823-48689842 | MS.gene24017:CDS | 30.0% | |
| TATTGTTGCCCATAACTAAA+AGG | + | chr1.3:48689035-48689054 | None:intergenic | 30.0% | |
| TATTTGCAGGTATCTAAAGA+GGG | - | chr1.3:48689362-48689381 | MS.gene24017:intron | 30.0% | |
| TCCACAATAATGTACGTAAA+CGG | + | chr1.3:48689395-48689414 | None:intergenic | 30.0% | |
| TCTAAATTTCAAAAGAGAGG+GGG | - | chr1.3:48689487-48689506 | MS.gene24017:intron | 30.0% | |
| TCTTCATGAAGCTTGAAATT+TGG | - | chr1.3:48688962-48688981 | MS.gene24017:CDS | 30.0% | |
| TTAAAACATAGAGAATGGCA+GGG | + | chr1.3:48692059-48692078 | None:intergenic | 30.0% | |
| TTAAATAAGCAATGTCGAGA+GGG | + | chr1.3:48688460-48688479 | None:intergenic | 30.0% | |
| TTAGATACCTGCAAATAACA+GGG | + | chr1.3:48689359-48689378 | None:intergenic | 30.0% | |
| TTATTTGCAGGTATCTAAAG+AGG | - | chr1.3:48689361-48689380 | MS.gene24017:intron | 30.0% | |
| TTCGAAGTATAATTTCCCAA+GGG | - | chr1.3:48689175-48689194 | MS.gene24017:CDS | 30.0% | |
| TTTAGATACCTGCAAATAAC+AGG | + | chr1.3:48689360-48689379 | None:intergenic | 30.0% | |
| TTTATTGGATCTGTGATCTA+TGG | - | chr1.3:48692502-48692521 | MS.gene24017:intron | 30.0% | |
| TTTCTCTTATGGTCTTCAAT+AGG | - | chr1.3:48692548-48692567 | MS.gene24017:intron | 30.0% | |
| ! | ACATATCGTTTTACCTTTTC+TGG | - | chr1.3:48691468-48691487 | MS.gene24017:CDS | 30.0% |
| ! | ACTCTTTTCATAGACTATTG+TGG | - | chr1.3:48688629-48688648 | MS.gene24017:intron | 30.0% |
| ! | ATAAGTTTGTTTGAGGTTAG+AGG | + | chr1.3:48692805-48692824 | None:intergenic | 30.0% |
| ! | ATTTAGAAATCAAAGCATCC+AGG | - | chr1.3:48690393-48690412 | MS.gene24017:intron | 30.0% |
| ! | GTGCATTTTACTAATGTGTT+TGG | - | chr1.3:48688812-48688831 | MS.gene24017:intron | 30.0% |
| ! | GTTGTTCTGATTTTATCATC+TGG | + | chr1.3:48688020-48688039 | None:intergenic | 30.0% |
| ! | TAACTACATTTCGATTTGTC+TGG | + | chr1.3:48689218-48689237 | None:intergenic | 30.0% |
| ! | TTTTCTTTTGCTTGTAAAGG+AGG | - | chr1.3:48690938-48690957 | MS.gene24017:intron | 30.0% |
| !! | CATCTGCTTTTAATGTAAAC+AGG | - | chr1.3:48691798-48691817 | MS.gene24017:intron | 30.0% |
| !! | CTGGAAGTATTTAACAGTTT+AGG | - | chr1.3:48688497-48688516 | MS.gene24017:intron | 30.0% |
| !! | GCAAGCATTGTATATTTTGA+CGG | - | chr1.3:48690276-48690295 | MS.gene24017:intron | 30.0% |
| !! | TATTTTTACTCTTCTCTGTG+GGG | - | chr1.3:48691550-48691569 | MS.gene24017:intron | 30.0% |
| !! | TGCATTTGATGATGCTTAAA+AGG | + | chr1.3:48691583-48691602 | None:intergenic | 30.0% |
| !!! | CAAGCATTGTATATTTTGAC+GGG | - | chr1.3:48690277-48690296 | MS.gene24017:intron | 30.0% |
| !!! | CATAATTGATATTTTGGCTC+AGG | + | chr1.3:48692179-48692198 | None:intergenic | 30.0% |
| !!! | CTACAATGTTTGACCTTTTT+TGG | - | chr1.3:48692101-48692120 | MS.gene24017:intron | 30.0% |
| !!! | CTCATTCTAACTACTTTTTC+AGG | - | chr1.3:48690163-48690182 | MS.gene24017:intron | 30.0% |
| AAAATAAAAGAGCTTCACGG+AGG | - | chr1.3:48690974-48690993 | MS.gene24017:intron | 35.0% | |
| AAAATTAGGGCAACCAGAAA+AGG | + | chr1.3:48691484-48691503 | None:intergenic | 35.0% | |
| AAATAAAAGAGCTTCACGGA+GGG | - | chr1.3:48690975-48690994 | MS.gene24017:intron | 35.0% | |
| AAGAAGGGTCATACTCATAT+AGG | + | chr1.3:48690089-48690108 | None:intergenic | 35.0% | |
| AATCAGAACAACCACTTTGA+AGG | - | chr1.3:48688028-48688047 | MS.gene24017:intron | 35.0% | |
| AATGCGATGCATAAATTGGA+AGG | - | chr1.3:48689623-48689642 | MS.gene24017:intron | 35.0% | |
| AATTCCAACCTGCATATCAT+CGG | - | chr1.3:48691924-48691943 | MS.gene24017:intron | 35.0% | |
| ACATCAGTGTTGTCAAATAG+TGG | + | chr1.3:48689999-48690018 | None:intergenic | 35.0% | |
| ACCGTTTACGTACATTATTG+TGG | - | chr1.3:48689391-48689410 | MS.gene24017:intron | 35.0% | |
| ACTATCTCATGTTCAACCAT+TGG | + | chr1.3:48690526-48690545 | None:intergenic | 35.0% | |
| ATTTATAGGTGATAACCTCG+TGG | + | chr1.3:48690332-48690351 | None:intergenic | 35.0% | |
| CCATCTTAATTGATGCAGAA+AGG | - | chr1.3:48691050-48691069 | MS.gene24017:intron | 35.0% | |
| CCTTTCTGCATCAATTAAGA+TGG | + | chr1.3:48691053-48691072 | None:intergenic | 35.0% | |
| CTGCTAATGTGGTATGTTAA+TGG | - | chr1.3:48692702-48692721 | MS.gene24017:intron | 35.0% | |
| CTGCTTGTAGACCATAAAAA+TGG | + | chr1.3:48692022-48692041 | None:intergenic | 35.0% | |
| GGGAAAATAAAAGAGCTTCA+CGG | - | chr1.3:48690971-48690990 | MS.gene24017:intron | 35.0% | |
| GGGTGAAAAAAAGAAACAAC+AGG | + | chr1.3:48690657-48690676 | None:intergenic | 35.0% | |
| GGTAAAACGATATGTACCAT+TGG | + | chr1.3:48691463-48691482 | None:intergenic | 35.0% | |
| GGTATGTGTAGATATGATTG+TGG | - | chr1.3:48691756-48691775 | MS.gene24017:intron | 35.0% | |
| GTTACCCAACGTAAAATTTG+TGG | - | chr1.3:48691683-48691702 | MS.gene24017:intron | 35.0% | |
| GTTATCGGGAAACTATACAT+CGG | - | chr1.3:48692421-48692440 | MS.gene24017:intron | 35.0% | |
| GTTTGGTACTCATTAGATTG+CGG | - | chr1.3:48688829-48688848 | MS.gene24017:intron | 35.0% | |
| TAAAATGCACGCATACACAA+TGG | + | chr1.3:48688802-48688821 | None:intergenic | 35.0% | |
| TACTATCTTGACTTCTTCTC+TGG | - | chr1.3:48689452-48689471 | MS.gene24017:intron | 35.0% | |
| TATACTTCGAATCAGTTGGT+GGG | + | chr1.3:48689166-48689185 | None:intergenic | 35.0% | |
| TCACACTTTATCGTCTAAGT+TGG | + | chr1.3:48690557-48690576 | None:intergenic | 35.0% | |
| TGAAGATCTTCAAGCATTTC+TGG | - | chr1.3:48689709-48689728 | MS.gene24017:intron | 35.0% | |
| TGTGCAAAGATGATAAAGAC+AGG | + | chr1.3:48689571-48689590 | None:intergenic | 35.0% | |
| TTACGTTGGGTAACCTTAAA+AGG | + | chr1.3:48691677-48691696 | None:intergenic | 35.0% | |
| TTATACTTCGAATCAGTTGG+TGG | + | chr1.3:48689167-48689186 | None:intergenic | 35.0% | |
| TTGTGGACAATGAAACGTAA+TGG | - | chr1.3:48689408-48689427 | MS.gene24017:intron | 35.0% | |
| TTTATAGGTGATAACCTCGT+GGG | + | chr1.3:48690331-48690350 | None:intergenic | 35.0% | |
| TTTATGACTGCTGAAACCAA+TGG | - | chr1.3:48691444-48691463 | MS.gene24017:intron | 35.0% | |
| ! | AACTCGATTCTGAAAGATCT+TGG | + | chr1.3:48690236-48690255 | None:intergenic | 35.0% |
| ! | ACAGCCACAAATTTTACGTT+GGG | + | chr1.3:48691690-48691709 | None:intergenic | 35.0% |
| ! | ACTCGATTCTGAAAGATCTT+GGG | + | chr1.3:48690235-48690254 | None:intergenic | 35.0% |
| ! | ATCTTGTATTTTTCCAGTGC+AGG | - | chr1.3:48691009-48691028 | MS.gene24017:intron | 35.0% |
| ! | CGTGGATACATCTTTTATTG+TGG | - | chr1.3:48688898-48688917 | MS.gene24017:intron | 35.0% |
| ! | TACAGCCACAAATTTTACGT+TGG | + | chr1.3:48691691-48691710 | None:intergenic | 35.0% |
| ! | TAGGATACATTTGAAGTGCT+TGG | + | chr1.3:48692828-48692847 | None:intergenic | 35.0% |
| ! | TCAAAAAACTCAGGCTTGTT+TGG | + | chr1.3:48688777-48688796 | None:intergenic | 35.0% |
| ! | TGCTTGGATAAGTTTGTTTG+AGG | + | chr1.3:48692812-48692831 | None:intergenic | 35.0% |
| ! | TTTCGCTTGCCTTATGTTTT+TGG | - | chr1.3:48690765-48690784 | MS.gene24017:intron | 35.0% |
| ! | TTTTGCTTGTAAAGGAGGTT+GGG | - | chr1.3:48690943-48690962 | MS.gene24017:intron | 35.0% |
| !! | AAGCCACTCTTTAAAGCATT+TGG | + | chr1.3:48688316-48688335 | None:intergenic | 35.0% |
| !! | AGTTTGTTATCTGCATTGGA+TGG | - | chr1.3:48690252-48690271 | MS.gene24017:intron | 35.0% |
| !! | ATCGAGTTTGTTATCTGCAT+TGG | - | chr1.3:48690248-48690267 | MS.gene24017:intron | 35.0% |
| !! | CTGATTTTATCATCTGGCTT+AGG | + | chr1.3:48688014-48688033 | None:intergenic | 35.0% |
| !! | CTTTAATTTTGCCACTGACT+GGG | + | chr1.3:48692383-48692402 | None:intergenic | 35.0% |
| !! | GAGACTAATTGTTCAAGTTG+TGG | - | chr1.3:48690025-48690044 | MS.gene24017:intron | 35.0% |
| !! | TGCATTTTAATGGGGATTTC+AGG | - | chr1.3:48692930-48692949 | MS.gene24017:intron | 35.0% |
| !! | TGCTCATGCCTTTTAGTTAT+GGG | - | chr1.3:48689024-48689043 | MS.gene24017:intron | 35.0% |
| !! | TTGCTCATGCCTTTTAGTTA+TGG | - | chr1.3:48689023-48689042 | MS.gene24017:intron | 35.0% |
| !!! | ACTTTTTGTTTCTATACGCC+AGG | - | chr1.3:48691250-48691269 | MS.gene24017:intron | 35.0% |
| !!! | CGCTTGTTTCTATCCTTTTA+AGG | - | chr1.3:48691661-48691680 | MS.gene24017:intron | 35.0% |
| !!! | TAACATGTATTTTGGGGCAA+GGG | + | chr1.3:48691356-48691375 | None:intergenic | 35.0% |
| !!! | TGTAATTTTCAGGTTCAAGG+AGG | - | chr1.3:48688348-48688367 | MS.gene24017:intron | 35.0% |
| !!! | TTAACATGTATTTTGGGGCA+AGG | + | chr1.3:48691357-48691376 | None:intergenic | 35.0% |
| AAACACAAGGCTCGTTTCTA+AGG | - | chr1.3:48688416-48688435 | MS.gene24017:CDS | 40.0% | |
| AAAGGAAGCAACCTTCAAAG+TGG | + | chr1.3:48688042-48688061 | None:intergenic | 40.0% | |
| AAAGGCAGAAGGAATAGGAA+CGG | - | chr1.3:48692399-48692418 | MS.gene24017:intron | 40.0% | |
| AAATTTCAAAAGAGAGGGGG+AGG | - | chr1.3:48689490-48689509 | MS.gene24017:intron | 40.0% | |
| AAGGAATAGGAACGGTTATC+GGG | - | chr1.3:48692407-48692426 | MS.gene24017:intron | 40.0% | |
| AATAGCCTCTTGCAATTGCA+AGG | - | chr1.3:48690048-48690067 | MS.gene24017:intron | 40.0% | |
| AATTGATGCAGAAAGGCCAA+GGG | - | chr1.3:48691057-48691076 | MS.gene24017:intron | 40.0% | |
| AATTTCAAAAGAGAGGGGGA+GGG | - | chr1.3:48689491-48689510 | MS.gene24017:intron | 40.0% | |
| ACATACCACATTAGCAGCAA+AGG | + | chr1.3:48692699-48692718 | None:intergenic | 40.0% | |
| ACCTAACTCATATCTCCAAC+AGG | + | chr1.3:48692895-48692914 | None:intergenic | 40.0% | |
| ACCTGTTGGAGATATGAGTT+AGG | - | chr1.3:48692891-48692910 | MS.gene24017:CDS | 40.0% | |
| AGACAACTTATTGGAATCGC+TGG | - | chr1.3:48691876-48691895 | MS.gene24017:intron | 40.0% | |
| AGATCCAATAAATGCATCCC+CGG | + | chr1.3:48692494-48692513 | None:intergenic | 40.0% | |
| ATGCTCAGCTAAGTTTCCAA+AGG | - | chr1.3:48691120-48691139 | MS.gene24017:intron | 40.0% | |
| ATTACCGATGATATGCAGGT+TGG | + | chr1.3:48691931-48691950 | None:intergenic | 40.0% | |
| CAAGAAATCAGGTACAGACT+TGG | + | chr1.3:48689105-48689124 | None:intergenic | 40.0% | |
| CAATTTATGCATCGCATTGC+TGG | + | chr1.3:48689621-48689640 | None:intergenic | 40.0% | |
| CAGCAATGCGATGCATAAAT+TGG | - | chr1.3:48689619-48689638 | MS.gene24017:intron | 40.0% | |
| CATACCACATTAGCAGCAAA+GGG | + | chr1.3:48692698-48692717 | None:intergenic | 40.0% | |
| CATGTTCAACCATTGGCATT+GGG | + | chr1.3:48690519-48690538 | None:intergenic | 40.0% | |
| CATTCCAAATCTTTCTGCCA+AGG | - | chr1.3:48691996-48692015 | MS.gene24017:CDS | 40.0% | |
| CCAATTTGTGTCTTTCGCAA+AGG | - | chr1.3:48692574-48692593 | MS.gene24017:intron | 40.0% | |
| CCAGTCAGTGGCAAAATTAA+AGG | - | chr1.3:48692381-48692400 | MS.gene24017:intron | 40.0% | |
| CCATGGCAGGATATAAAGAA+GGG | + | chr1.3:48690104-48690123 | None:intergenic | 40.0% | |
| CCTTTGCGAAAGACACAAAT+TGG | + | chr1.3:48692577-48692596 | None:intergenic | 40.0% | |
| CTCGTTTAGGTCTAAACACA+AGG | - | chr1.3:48688403-48688422 | MS.gene24017:CDS | 40.0% | |
| CTTGGCAGAAAGATTTGGAA+TGG | + | chr1.3:48691998-48692017 | None:intergenic | 40.0% | |
| GAAGGAATAGGAACGGTTAT+CGG | - | chr1.3:48692406-48692425 | MS.gene24017:intron | 40.0% | |
| GATAACCTTTCTTTGCTGAC+AGG | - | chr1.3:48691608-48691627 | MS.gene24017:intron | 40.0% | |
| GATCCATACTTTATAGCACC+AGG | - | chr1.3:48690129-48690148 | MS.gene24017:intron | 40.0% | |
| GATTCATAAAACACCCTGGT+TGG | + | chr1.3:48690833-48690852 | None:intergenic | 40.0% | |
| GCTGCTAGAATTGATTATGG+AGG | + | chr1.3:48688292-48688311 | None:intergenic | 40.0% | |
| GGAGCTGCTAGAATTGATTA+TGG | + | chr1.3:48688295-48688314 | None:intergenic | 40.0% | |
| GGTGGATGTAGACAACTTAT+TGG | - | chr1.3:48691867-48691886 | MS.gene24017:intron | 40.0% | |
| GTAGACCATAAAAATGGCCT+TGG | + | chr1.3:48692016-48692035 | None:intergenic | 40.0% | |
| GTATCATTGGAGGATATCCA+GGG | + | chr1.3:48690212-48690231 | None:intergenic | 40.0% | |
| GTGGCAAAATTAAAGGCAGA+AGG | - | chr1.3:48692388-48692407 | MS.gene24017:intron | 40.0% | |
| TAATTGATGCAGAAAGGCCA+AGG | - | chr1.3:48691056-48691075 | MS.gene24017:intron | 40.0% | |
| TATCATTGGAGGATATCCAG+GGG | + | chr1.3:48690211-48690230 | None:intergenic | 40.0% | |
| TCATGTTCAACCATTGGCAT+TGG | + | chr1.3:48690520-48690539 | None:intergenic | 40.0% | |
| TGCACTTGCAATATCCACTA+TGG | + | chr1.3:48690616-48690635 | None:intergenic | 40.0% | |
| TGTTTAGACCTAAACGAGCA+AGG | + | chr1.3:48688401-48688420 | None:intergenic | 40.0% | |
| TTAGATGAGCTACAGACTGA+TGG | - | chr1.3:48688875-48688894 | MS.gene24017:intron | 40.0% | |
| TTGCATTACCGATGATATGC+AGG | + | chr1.3:48691935-48691954 | None:intergenic | 40.0% | |
| TTGCGAAAGACACAAATTGG+TGG | + | chr1.3:48692574-48692593 | None:intergenic | 40.0% | |
| TTGTGGATCGCAAGAAATAG+CGG | - | chr1.3:48689840-48689859 | MS.gene24017:intron | 40.0% | |
| ! | AAATTACAGGGTATCCAACC+AGG | - | chr1.3:48690816-48690835 | MS.gene24017:intron | 40.0% |
| ! | AATTACAGGGTATCCAACCA+GGG | - | chr1.3:48690817-48690836 | MS.gene24017:intron | 40.0% |
| ! | AGATACCTGTGAGACTGTTT+TGG | + | chr1.3:48688720-48688739 | None:intergenic | 40.0% |
| ! | ATACTTCGAATCAGTTGGTG+GGG | + | chr1.3:48689165-48689184 | None:intergenic | 40.0% |
| ! | CTCGATTCTGAAAGATCTTG+GGG | + | chr1.3:48690234-48690253 | None:intergenic | 40.0% |
| ! | CTTTTGCTTGTAAAGGAGGT+TGG | - | chr1.3:48690942-48690961 | MS.gene24017:intron | 40.0% |
| ! | GAAAGATCTTGGGGTATCAT+TGG | + | chr1.3:48690225-48690244 | None:intergenic | 40.0% |
| ! | GCTGTAACTTTGGGAAAAGA+TGG | - | chr1.3:48691705-48691724 | MS.gene24017:intron | 40.0% |
| ! | TACGTGTCACTATGAATGTC+TGG | + | chr1.3:48692247-48692266 | None:intergenic | 40.0% |
| ! | TTAACAGTTTAGGCGCTGTT+TGG | - | chr1.3:48688507-48688526 | MS.gene24017:intron | 40.0% |
| ! | TTATGCTCCCTGTTATTTGC+AGG | - | chr1.3:48689349-48689368 | MS.gene24017:intron | 40.0% |
| ! | TTCATTCCCGCCAAATTTTG+AGG | - | chr1.3:48687894-48687913 | MS.gene24017:CDS | 40.0% |
| ! | TTTTAATGGGGATTTCAGGC+AGG | - | chr1.3:48692934-48692953 | MS.gene24017:intron | 40.0% |
| !! | ATCCCTGAAGTTCTAGAAAC+AGG | - | chr1.3:48692280-48692299 | MS.gene24017:intron | 40.0% |
| !! | ATCCCTGTTTCTAGAACTTC+AGG | + | chr1.3:48692286-48692305 | None:intergenic | 40.0% |
| !! | CAACCTGGTGCTATAAAGTA+TGG | + | chr1.3:48690135-48690154 | None:intergenic | 40.0% |
| !! | CATTGATTCTACTTGACGCT+AGG | + | chr1.3:48688225-48688244 | None:intergenic | 40.0% |
| !! | CCTTTAATTTTGCCACTGAC+TGG | + | chr1.3:48692384-48692403 | None:intergenic | 40.0% |
| !! | GCTCCAAATGCTTTAAAGAG+TGG | - | chr1.3:48688310-48688329 | MS.gene24017:intron | 40.0% |
| !! | TCCCTGAAGTTCTAGAAACA+GGG | - | chr1.3:48692281-48692300 | MS.gene24017:intron | 40.0% |
| !! | TCCCTGTTTCTAGAACTTCA+GGG | + | chr1.3:48692285-48692304 | None:intergenic | 40.0% |
| !!! | AATTTTCAGGTTCAAGGAGG+TGG | - | chr1.3:48688351-48688370 | MS.gene24017:CDS | 40.0% |
| !!! | TTCTGCCAAGGCCATTTTTA+TGG | - | chr1.3:48692008-48692027 | MS.gene24017:CDS | 40.0% |
| AAAGAGAGGGAAACGCACAA+CGG | + | chr1.3:48687872-48687891 | None:intergenic | 45.0% | |
| AAAGTATGGATCTCCTGCCA+TGG | + | chr1.3:48690121-48690140 | None:intergenic | 45.0% | |
| AACGGTAGCCAAGAAATCGA+CGG | + | chr1.3:48687982-48688001 | None:intergenic | 45.0% | |
| AGATCATCTAACCCTTCCCT+TGG | + | chr1.3:48691076-48691095 | None:intergenic | 45.0% | |
| ATTTCAAAAGAGAGGGGGAG+GGG | - | chr1.3:48689492-48689511 | MS.gene24017:intron | 45.0% | |
| CAACTCTGCGAGTTATGCTA+AGG | + | chr1.3:48689791-48689810 | None:intergenic | 45.0% | |
| CCCTTCTTTATATCCTGCCA+TGG | - | chr1.3:48690101-48690120 | MS.gene24017:intron | 45.0% | |
| CGAACTTGTATACATACCCC+TGG | - | chr1.3:48690192-48690211 | MS.gene24017:intron | 45.0% | |
| GAGAAATCAGCTGCAGACTA+GGG | + | chr1.3:48689083-48689102 | None:intergenic | 45.0% | |
| GAGTGGATGTGCAAGAAATC+AGG | + | chr1.3:48689116-48689135 | None:intergenic | 45.0% | |
| GAGTTAGGTGGATCTAGTTG+AGG | - | chr1.3:48689522-48689541 | MS.gene24017:intron | 45.0% | |
| GCCATGGCAGGATATAAAGA+AGG | + | chr1.3:48690105-48690124 | None:intergenic | 45.0% | |
| GCGGGAATGAAAGAAAGAGA+GGG | + | chr1.3:48687885-48687904 | None:intergenic | 45.0% | |
| GCGTCAAGTAGAATCAATGC+TGG | - | chr1.3:48688226-48688245 | MS.gene24017:intron | 45.0% | |
| GCTATAGTGCTATAGAGTGG+CGG | + | chr1.3:48689975-48689994 | None:intergenic | 45.0% | |
| GGAATCGCTGGAGTTAAGAA+AGG | - | chr1.3:48691888-48691907 | MS.gene24017:intron | 45.0% | |
| GGTATCATTGGAGGATATCC+AGG | + | chr1.3:48690213-48690232 | None:intergenic | 45.0% | |
| GTGACACGTACTGAATGACT+TGG | - | chr1.3:48692257-48692276 | MS.gene24017:intron | 45.0% | |
| TATGCTGTAGTGCTAGAGTG+CGG | - | chr1.3:48689879-48689898 | MS.gene24017:intron | 45.0% | |
| TCTTTATATCCTGCCATGGC+AGG | - | chr1.3:48690105-48690124 | MS.gene24017:intron | 45.0% | |
| TGGCTTAGGATAAGCAGCAA+CGG | + | chr1.3:48688000-48688019 | None:intergenic | 45.0% | |
| TTAACCTGCCTTGCTCGTTT+AGG | - | chr1.3:48688390-48688409 | MS.gene24017:CDS | 45.0% | |
| TTGTAAAGGAGGTTGGGAGT+GGG | - | chr1.3:48690949-48690968 | MS.gene24017:intron | 45.0% | |
| ! | AGATCTTGGGGTATCATTGG+AGG | + | chr1.3:48690222-48690241 | None:intergenic | 45.0% |
| ! | ATGGCCTTGGCAGAAAGATT+TGG | + | chr1.3:48692003-48692022 | None:intergenic | 45.0% |
| ! | GGTGCTATAGTGCTATAGAG+TGG | + | chr1.3:48689978-48689997 | None:intergenic | 45.0% |
| !! | AAGGCAGGTTAAAGCATTGC+CGG | + | chr1.3:48688382-48688401 | None:intergenic | 45.0% |
| !! | ATCAGTCACCGTCGATTTCT+TGG | - | chr1.3:48687971-48687990 | MS.gene24017:intron | 45.0% |
| !! | AAAACTATTTAAAAAAAAAA+AGG | + | chr1.3:48688060-48688079 | None:intergenic | 5.0% |
| AAGTCCTACCACAGAAGAGG+TGG | - | chr1.3:48691849-48691868 | MS.gene24017:intron | 50.0% | |
| ACATCCACCTCTTCTGTGGT+AGG | + | chr1.3:48691856-48691875 | None:intergenic | 50.0% | |
| AGCAAGTCCTACCACAGAAG+AGG | - | chr1.3:48691846-48691865 | MS.gene24017:intron | 50.0% | |
| AGGATAGAAACAAGCGCTCG+CGG | + | chr1.3:48691657-48691676 | None:intergenic | 50.0% | |
| AGTGGTATCAACAAGCTCCG+AGG | + | chr1.3:48692467-48692486 | None:intergenic | 50.0% | |
| ATACACGCACGTGCTTATGC+AGG | - | chr1.3:48687938-48687957 | MS.gene24017:intron | 50.0% | |
| ATGCAGAAAGGCCAAGGGAA+GGG | - | chr1.3:48691062-48691081 | MS.gene24017:intron | 50.0% | |
| CATCTAATATGCCCCTGCCT+GGG | + | chr1.3:48688862-48688881 | None:intergenic | 50.0% | |
| CCATGCCTGTCAGCAAAGAA+AGG | + | chr1.3:48691616-48691635 | None:intergenic | 50.0% | |
| CCTTTCTTTGCTGACAGGCA+TGG | - | chr1.3:48691613-48691632 | MS.gene24017:intron | 50.0% | |
| CTTGTAAAGGAGGTTGGGAG+TGG | - | chr1.3:48690948-48690967 | MS.gene24017:intron | 50.0% | |
| CTTGTTGATACCACTGGTGC+CGG | - | chr1.3:48692472-48692491 | MS.gene24017:CDS | 50.0% | |
| GAATAAAGGACGCTAGGCGT+GGG | + | chr1.3:48693011-48693030 | None:intergenic | 50.0% | |
| GAATGAGTCAAAGGGCAACC+TGG | + | chr1.3:48690150-48690169 | None:intergenic | 50.0% | |
| GCAAAGGGTAGCATTGTCTC+TGG | + | chr1.3:48692683-48692702 | None:intergenic | 50.0% | |
| GCTACCCTTTGCTGCTAATG+TGG | - | chr1.3:48692691-48692710 | MS.gene24017:intron | 50.0% | |
| GCTCATCATCCCAATGCCAA+TGG | - | chr1.3:48690507-48690526 | MS.gene24017:intron | 50.0% | |
| GCTCTCCAAAACAGTCTCAC+AGG | - | chr1.3:48688712-48688731 | MS.gene24017:intron | 50.0% | |
| GGAAGCCTTGCAATTGCAAG+AGG | + | chr1.3:48690056-48690075 | None:intergenic | 50.0% | |
| GGAGAAATCAGCTGCAGACT+AGG | + | chr1.3:48689084-48689103 | None:intergenic | 50.0% | |
| GGCGGGAATGAAAGAAAGAG+AGG | + | chr1.3:48687886-48687905 | None:intergenic | 50.0% | |
| GTCTACATCCACCTCTTCTG+TGG | + | chr1.3:48691860-48691879 | None:intergenic | 50.0% | |
| GTGGTATCAACAAGCTCCGA+GGG | + | chr1.3:48692466-48692485 | None:intergenic | 50.0% | |
| TAGACCTAAACGAGCAAGGC+AGG | + | chr1.3:48688397-48688416 | None:intergenic | 50.0% | |
| TCATCTAATATGCCCCTGCC+TGG | + | chr1.3:48688863-48688882 | None:intergenic | 50.0% | |
| TGAATAAAGGACGCTAGGCG+TGG | + | chr1.3:48693012-48693031 | None:intergenic | 50.0% | |
| TGCTCCTAGATCTCTGCACT+TGG | + | chr1.3:48692962-48692981 | None:intergenic | 50.0% | |
| TGTAAAGGAGGTTGGGAGTG+GGG | - | chr1.3:48690950-48690969 | MS.gene24017:intron | 50.0% | |
| TGTAGACTTGTAGCGCGAAC+TGG | + | chr1.3:48692086-48692105 | None:intergenic | 50.0% | |
| TTGTTGATACCACTGGTGCC+GGG | - | chr1.3:48692473-48692492 | MS.gene24017:CDS | 50.0% | |
| TTTCAAAAGAGAGGGGGAGG+GGG | - | chr1.3:48689493-48689512 | MS.gene24017:intron | 50.0% | |
| ! | AGAGATCTAGGAGCACGAAG+CGG | - | chr1.3:48692967-48692986 | MS.gene24017:intron | 50.0% |
| ! | GTTCAAGGAGGTGGTAATGC+CGG | - | chr1.3:48688360-48688379 | MS.gene24017:CDS | 50.0% |
| ! | TTGGCATTGGGATGATGAGC+TGG | + | chr1.3:48690507-48690526 | None:intergenic | 50.0% |
| ! | TTTTTCCAGTGCAGGCAGCT+AGG | - | chr1.3:48691017-48691036 | MS.gene24017:intron | 50.0% |
| !! | GTAGGACTTGCTGCCAGAAA+AGG | + | chr1.3:48691838-48691857 | None:intergenic | 50.0% |
| !! | TCGGAGCTTGTTGATACCAC+TGG | - | chr1.3:48692466-48692485 | MS.gene24017:CDS | 50.0% |
| ACGCACGTGCTTATGCAGGT+GGG | - | chr1.3:48687942-48687961 | MS.gene24017:intron | 55.0% | |
| CTGACTGGGTGCAAGGGAAA+AGG | + | chr1.3:48692369-48692388 | None:intergenic | 55.0% | |
| GATGCAGAAAGGCCAAGGGA+AGG | - | chr1.3:48691061-48691080 | MS.gene24017:intron | 55.0% | |
| GGTGCCAAGTGCAGAGATCT+AGG | - | chr1.3:48692955-48692974 | MS.gene24017:intron | 55.0% | |
| GTAAAGGAGGTTGGGAGTGG+GGG | - | chr1.3:48690951-48690970 | MS.gene24017:intron | 55.0% | |
| GTATCAACAAGCTCCGAGGG+CGG | + | chr1.3:48692463-48692482 | None:intergenic | 55.0% | |
| TAGATTGCGGATGACAGCCC+AGG | - | chr1.3:48688842-48688861 | MS.gene24017:intron | 55.0% | |
| TATGGATCTCCTGCCATGGC+AGG | + | chr1.3:48690117-48690136 | None:intergenic | 55.0% | |
| TGCTCTAGTTGTTGCCCACG+AGG | - | chr1.3:48690314-48690333 | MS.gene24017:intron | 55.0% | |
| TTCAAAAGAGAGGGGGAGGG+GGG | - | chr1.3:48689494-48689513 | MS.gene24017:intron | 55.0% | |
| TTCTTCCTAGCTGCCTGCAC+TGG | + | chr1.3:48691025-48691044 | None:intergenic | 55.0% | |
| TTGCTGACAGGCATGGACAG+AGG | - | chr1.3:48691620-48691639 | MS.gene24017:intron | 55.0% | |
| TTTCCCTTGCACCCAGTCAG+TGG | - | chr1.3:48692369-48692388 | MS.gene24017:intron | 55.0% | |
| ! | GGTGCCGGGGATGCATTTAT+TGG | - | chr1.3:48692487-48692506 | MS.gene24017:CDS | 55.0% |
| ! | TGAGCTACAGACTGATGGCG+TGG | - | chr1.3:48688880-48688899 | MS.gene24017:intron | 55.0% |
| ! | TGTTGATACCACTGGTGCCG+GGG | - | chr1.3:48692474-48692493 | MS.gene24017:CDS | 55.0% |
| ! | TTGCCACTGACTGGGTGCAA+GGG | + | chr1.3:48692375-48692394 | None:intergenic | 55.0% |
| ! | TTTGCCACTGACTGGGTGCA+AGG | + | chr1.3:48692376-48692395 | None:intergenic | 55.0% |
| !! | AACGGTGGCGCTTTGAGGAA+CGG | + | chr1.3:48687854-48687873 | None:intergenic | 55.0% |
| !! | CTGCTCGAGAGAAGTGTCAG+TGG | - | chr1.3:48691735-48691754 | MS.gene24017:intron | 55.0% |
| !! | GTGCTTATGCAGGTGGGTTG+CGG | - | chr1.3:48687948-48687967 | MS.gene24017:intron | 55.0% |
| AAATGCATCCCCGGCACCAG+TGG | + | chr1.3:48692485-48692504 | None:intergenic | 60.0% | |
| CACGCACGTGCTTATGCAGG+TGG | - | chr1.3:48687941-48687960 | MS.gene24017:intron | 60.0% | |
| GAGAGGGAAACGCACAACGG+TGG | + | chr1.3:48687869-48687888 | None:intergenic | 60.0% | |
| ! | AGGGGGGAGCATGAGTTAGG+TGG | - | chr1.3:48689510-48689529 | MS.gene24017:intron | 60.0% |
| !! | AGCTGAGAGCATTCCGCCCT+CGG | - | chr1.3:48692447-48692466 | MS.gene24017:CDS | 60.0% |
| !! | GTGGGGTTCTGGACTGCCAA+TGG | - | chr1.3:48689291-48689310 | MS.gene24017:intron | 60.0% |
| CGCACAACGGTGGCGCTTTG+AGG | + | chr1.3:48687859-48687878 | None:intergenic | 65.0% | |
| TGCGGATGACAGCCCAGGCA+GGG | - | chr1.3:48688847-48688866 | MS.gene24017:intron | 65.0% | |
| TTGCGGATGACAGCCCAGGC+AGG | - | chr1.3:48688846-48688865 | MS.gene24017:intron | 65.0% | |
| ! | GGGAGGGGGGAGCATGAGTT+AGG | - | chr1.3:48689507-48689526 | MS.gene24017:intron | 65.0% |
| !! | GGCGCTTTGAGGAACGGAGG+AGG | + | chr1.3:48687848-48687867 | None:intergenic | 65.0% |
| !! | GGTGGCGCTTTGAGGAACGG+AGG | + | chr1.3:48687851-48687870 | None:intergenic | 65.0% |
| ACGCTAGGCGTGGGTCTGCG+CGG | + | chr1.3:48693002-48693021 | None:intergenic | 70.0% | |
| AGGCGTGGGTCTGCGCGGTA+TGG | + | chr1.3:48692997-48693016 | None:intergenic | 70.0% | |
| GCGGATGACAGCCCAGGCAG+GGG | - | chr1.3:48688848-48688867 | MS.gene24017:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 48687838 | 48693035 | 48687838 | ID=MS.gene24017 |
| chr1.3 | mRNA | 48687838 | 48693035 | 48687838 | ID=MS.gene24017.t1;Parent=MS.gene24017 |
| chr1.3 | exon | 48693000 | 48693035 | 48693000 | ID=MS.gene24017.t1.exon1;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48693000 | 48693035 | 48693000 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48692824 | 48692913 | 48692824 | ID=MS.gene24017.t1.exon2;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48692824 | 48692913 | 48692824 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48692436 | 48692513 | 48692436 | ID=MS.gene24017.t1.exon3;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48692436 | 48692513 | 48692436 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48691954 | 48692028 | 48691954 | ID=MS.gene24017.t1.exon4;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48691954 | 48692028 | 48691954 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48691450 | 48691502 | 48691450 | ID=MS.gene24017.t1.exon5;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48691450 | 48691502 | 48691450 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48690538 | 48690688 | 48690538 | ID=MS.gene24017.t1.exon6;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48690538 | 48690688 | 48690538 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48689732 | 48689842 | 48689732 | ID=MS.gene24017.t1.exon7;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48689732 | 48689842 | 48689732 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48689117 | 48689243 | 48689117 | ID=MS.gene24017.t1.exon8;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48689117 | 48689243 | 48689117 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48688928 | 48689025 | 48688928 | ID=MS.gene24017.t1.exon9;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48688928 | 48689025 | 48688928 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48688350 | 48688488 | 48688350 | ID=MS.gene24017.t1.exon10;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48688350 | 48688488 | 48688350 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48688161 | 48688213 | 48688161 | ID=MS.gene24017.t1.exon11;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48688161 | 48688213 | 48688161 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| chr1.3 | exon | 48687838 | 48687921 | 48687838 | ID=MS.gene24017.t1.exon12;Parent=MS.gene24017.t1 |
| chr1.3 | CDS | 48687838 | 48687921 | 48687838 | ID=cds.MS.gene24017.t1;Parent=MS.gene24017.t1 |
| Gene Sequence |
| Protein sequence |
