AlfalfaGEDB | MS.gene46239

M. sativa cultivar XinJiangDaYe / MS.gene46239

KEGG: -
GO: GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016651 GO:0016655 GO:0055114
PFAM: PF10664.12

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46239.t1	XP_013461320.1	100	132	0	0	1	132	83	214	4.30E-72	280.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46239.t1	A9PJQ8	87.8	123	15	0	1	123	75	197	6.1e-59	228.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46239.t1	A0A072VB39	100.0	132	0	0	1	132	83	214	3.1e-72	280.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene46239	0.807635	4.59E-50	-1.69E-46
MS.gene049170	MS.gene46239	0.81301	3.18E-51	-1.69E-46
MS.gene049346	MS.gene46239	0.804508	2.09E-49	-1.69E-46
MS.gene049356	MS.gene46239	0.846042	2.78E-59	-1.69E-46
MS.gene049369	MS.gene46239	0.807549	4.79E-50	-1.69E-46
MS.gene049396	MS.gene46239	0.801778	7.67E-49	-1.69E-46
MS.gene049427	MS.gene46239	0.804458	2.14E-49	-1.69E-46
MS.gene049488	MS.gene46239	0.802358	5.83E-49	-1.69E-46
MS.gene049609	MS.gene46239	0.842696	2.21E-58	-1.69E-46
MS.gene049661	MS.gene46239	0.834549	2.81E-56	-1.69E-46
MS.gene049662	MS.gene46239	0.836318	1.00E-56	-1.69E-46
MS.gene049758	MS.gene46239	0.804354	2.25E-49	-1.69E-46
MS.gene049805	MS.gene46239	0.834625	2.69E-56	-1.69E-46
MS.gene049910	MS.gene46239	0.805597	1.24E-49	-1.69E-46
MS.gene050076	MS.gene46239	0.807227	5.60E-50	-1.69E-46
MS.gene050301	MS.gene46239	0.837148	6.17E-57	-1.69E-46
MS.gene050397	MS.gene46239	0.850844	1.31E-60	-1.69E-46
MS.gene050406	MS.gene46239	0.824892	6.31E-54	-1.69E-46
MS.gene050426	MS.gene46239	-0.840226	9.88E-58	-1.69E-46
MS.gene050432	MS.gene46239	0.834789	2.45E-56	-1.69E-46
MS.gene050464	MS.gene46239	0.863224	2.90E-64	-1.69E-46
MS.gene050529	MS.gene46239	0.873449	1.46E-67	-1.69E-46
MS.gene050593	MS.gene46239	0.870896	1.03E-66	-1.69E-46
MS.gene050670	MS.gene46239	0.932474	8.06E-95	-1.69E-46
MS.gene050747	MS.gene46239	0.801185	1.01E-48	-1.69E-46
MS.gene050772	MS.gene46239	0.824512	7.75E-54	-1.69E-46
MS.gene05101	MS.gene46239	0.811481	6.85E-51	-1.69E-46
MS.gene05105	MS.gene46239	0.919167	6.31E-87	-1.69E-46
MS.gene051387	MS.gene46239	0.860489	1.99E-63	-1.69E-46
MS.gene051525	MS.gene46239	0.854391	1.27E-61	-1.69E-46
MS.gene051582	MS.gene46239	0.859475	4.03E-63	-1.69E-46
MS.gene051605	MS.gene46239	0.805095	1.57E-49	-1.69E-46
MS.gene051666	MS.gene46239	0.827902	1.21E-54	-1.69E-46
MS.gene052011	MS.gene46239	-0.843195	1.63E-58	-1.69E-46
MS.gene052077	MS.gene46239	0.841578	4.36E-58	-1.69E-46
MS.gene052078	MS.gene46239	0.806434	8.24E-50	-1.69E-46
MS.gene052134	MS.gene46239	0.81745	3.28E-52	-1.69E-46
MS.gene052135	MS.gene46239	0.819026	1.44E-52	-1.69E-46
MS.gene052136	MS.gene46239	0.810108	1.36E-50	-1.69E-46
MS.gene052188	MS.gene46239	0.873599	1.30E-67	-1.69E-46
MS.gene052253	MS.gene46239	0.866067	3.74E-65	-1.69E-46
MS.gene052310	MS.gene46239	0.876765	1.08E-68	-1.69E-46
MS.gene052322	MS.gene46239	0.806077	9.80E-50	-1.69E-46
MS.gene052340	MS.gene46239	0.862806	3.90E-64	-1.69E-46
MS.gene052414	MS.gene46239	0.812723	3.67E-51	-1.69E-46
MS.gene052421	MS.gene46239	0.85049	1.64E-60	-1.69E-46
MS.gene052481	MS.gene46239	0.833941	3.99E-56	-1.69E-46
MS.gene052484	MS.gene46239	0.818222	2.19E-52	-1.69E-46
MS.gene052485	MS.gene46239	0.836197	1.08E-56	-1.69E-46
MS.gene052501	MS.gene46239	0.811609	6.43E-51	-1.69E-46
MS.gene052505	MS.gene46239	0.837736	4.36E-57	-1.69E-46
MS.gene052767	MS.gene46239	0.82123	4.51E-53	-1.69E-46
MS.gene052982	MS.gene46239	0.834398	3.07E-56	-1.69E-46
MS.gene053103	MS.gene46239	0.845751	3.34E-59	-1.69E-46
MS.gene053104	MS.gene46239	0.838527	2.73E-57	-1.69E-46
MS.gene053209	MS.gene46239	0.867062	1.80E-65	-1.69E-46
MS.gene053449	MS.gene46239	0.831431	1.68E-55	-1.69E-46
MS.gene053557	MS.gene46239	0.81881	1.61E-52	-1.69E-46
MS.gene053574	MS.gene46239	0.812263	4.63E-51	-1.69E-46
MS.gene053758	MS.gene46239	0.808775	2.62E-50	-1.69E-46
MS.gene053836	MS.gene46239	0.813077	3.07E-51	-1.69E-46
MS.gene053912	MS.gene46239	0.822172	2.73E-53	-1.69E-46
MS.gene053928	MS.gene46239	0.814152	1.78E-51	-1.69E-46
MS.gene054183	MS.gene46239	0.811948	5.42E-51	-1.69E-46
MS.gene054349	MS.gene46239	0.82807	1.10E-54	-1.69E-46
MS.gene054556	MS.gene46239	0.805144	1.54E-49	-1.69E-46
MS.gene054719	MS.gene46239	0.812053	5.14E-51	-1.69E-46
MS.gene054742	MS.gene46239	-0.804685	1.92E-49	-1.69E-46
MS.gene054918	MS.gene46239	0.806387	8.43E-50	-1.69E-46
MS.gene05505	MS.gene46239	0.845731	3.38E-59	-1.69E-46
MS.gene055116	MS.gene46239	0.926053	7.95E-91	-1.69E-46
MS.gene055277	MS.gene46239	0.843729	1.17E-58	-1.69E-46
MS.gene055289	MS.gene46239	0.818579	1.82E-52	-1.69E-46
MS.gene055369	MS.gene46239	0.862454	5.01E-64	-1.69E-46
MS.gene055422	MS.gene46239	0.80899	2.36E-50	-1.69E-46
MS.gene055428	MS.gene46239	0.800917	1.15E-48	-1.69E-46
MS.gene055539	MS.gene46239	0.809676	1.68E-50	-1.69E-46
MS.gene05553	MS.gene46239	0.85083	1.32E-60	-1.69E-46
MS.gene055564	MS.gene46239	0.806801	6.90E-50	-1.69E-46
MS.gene055741	MS.gene46239	0.823302	1.49E-53	-1.69E-46
MS.gene055744	MS.gene46239	0.831857	1.32E-55	-1.69E-46
MS.gene055859	MS.gene46239	0.805232	1.47E-49	-1.69E-46
MS.gene055909	MS.gene46239	0.8009	1.16E-48	-1.69E-46
MS.gene055911	MS.gene46239	0.807116	5.92E-50	-1.69E-46
MS.gene05592	MS.gene46239	0.853119	2.95E-61	-1.69E-46
MS.gene056191	MS.gene46239	0.826997	2.00E-54	-1.69E-46
MS.gene056337	MS.gene46239	0.802703	4.95E-49	-1.69E-46
MS.gene056407	MS.gene46239	0.882593	9.14E-71	-1.69E-46
MS.gene056422	MS.gene46239	0.816862	4.44E-52	-1.69E-46
MS.gene056511	MS.gene46239	0.887841	1.00E-72	-1.69E-46
MS.gene056514	MS.gene46239	0.813899	2.03E-51	-1.69E-46
MS.gene056609	MS.gene46239	0.813148	2.96E-51	-1.69E-46
MS.gene056612	MS.gene46239	0.808884	2.49E-50	-1.69E-46
MS.gene05664	MS.gene46239	0.820193	7.81E-53	-1.69E-46
MS.gene056659	MS.gene46239	0.85642	3.26E-62	-1.69E-46
MS.gene056723	MS.gene46239	0.816802	4.58E-52	-1.69E-46
MS.gene056899	MS.gene46239	-0.823196	1.58E-53	-1.69E-46
MS.gene05702	MS.gene46239	0.868712	5.33E-66	-1.69E-46
MS.gene057076	MS.gene46239	0.837562	4.83E-57	-1.69E-46
MS.gene057124	MS.gene46239	0.883008	6.45E-71	-1.69E-46
MS.gene057146	MS.gene46239	0.816348	5.79E-52	-1.69E-46
MS.gene057331	MS.gene46239	0.836729	7.89E-57	-1.69E-46
MS.gene05735	MS.gene46239	0.809921	1.49E-50	-1.69E-46
MS.gene057396	MS.gene46239	0.838423	2.90E-57	-1.69E-46
MS.gene057416	MS.gene46239	0.831203	1.91E-55	-1.69E-46
MS.gene057448	MS.gene46239	0.825435	4.69E-54	-1.69E-46
MS.gene057449	MS.gene46239	0.805325	1.41E-49	-1.69E-46
MS.gene057450	MS.gene46239	0.82719	1.79E-54	-1.69E-46
MS.gene057476	MS.gene46239	0.811812	5.81E-51	-1.69E-46
MS.gene057734	MS.gene46239	0.818558	1.84E-52	-1.69E-46
MS.gene057749	MS.gene46239	0.844565	6.99E-59	-1.69E-46
MS.gene057823	MS.gene46239	0.842423	2.61E-58	-1.69E-46
MS.gene057825	MS.gene46239	0.812489	4.13E-51	-1.69E-46
MS.gene057927	MS.gene46239	0.807133	5.87E-50	-1.69E-46
MS.gene058002	MS.gene46239	0.829932	3.90E-55	-1.69E-46
MS.gene058006	MS.gene46239	0.810879	9.26E-51	-1.69E-46
MS.gene058007	MS.gene46239	0.837044	6.56E-57	-1.69E-46
MS.gene058019	MS.gene46239	0.832692	8.18E-56	-1.69E-46
MS.gene058082	MS.gene46239	0.826753	2.28E-54	-1.69E-46
MS.gene05811	MS.gene46239	0.803015	4.27E-49	-1.69E-46
MS.gene058130	MS.gene46239	0.803541	3.32E-49	-1.69E-46
MS.gene058142	MS.gene46239	0.812206	4.76E-51	-1.69E-46
MS.gene058233	MS.gene46239	0.84513	4.92E-59	-1.69E-46
MS.gene058293	MS.gene46239	0.834808	2.42E-56	-1.69E-46
MS.gene058365	MS.gene46239	0.82605	3.36E-54	-1.69E-46
MS.gene058660	MS.gene46239	0.839595	1.44E-57	-1.69E-46
MS.gene058700	MS.gene46239	0.856305	3.52E-62	-1.69E-46
MS.gene058710	MS.gene46239	0.812952	3.27E-51	-1.69E-46
MS.gene05886	MS.gene46239	0.836918	7.06E-57	-1.69E-46
MS.gene058928	MS.gene46239	0.838301	3.12E-57	-1.69E-46
MS.gene058948	MS.gene46239	0.814433	1.54E-51	-1.69E-46
MS.gene059011	MS.gene46239	0.836862	7.29E-57	-1.69E-46
MS.gene05907	MS.gene46239	0.846975	1.55E-59	-1.69E-46
MS.gene059141	MS.gene46239	0.817884	2.62E-52	-1.69E-46
MS.gene059285	MS.gene46239	0.827123	1.86E-54	-1.69E-46
MS.gene059294	MS.gene46239	0.817703	2.87E-52	-1.69E-46
MS.gene059366	MS.gene46239	0.861689	8.60E-64	-1.69E-46
MS.gene059420	MS.gene46239	0.858377	8.59E-63	-1.69E-46
MS.gene059455	MS.gene46239	0.818485	1.91E-52	-1.69E-46
MS.gene059462	MS.gene46239	0.811665	6.25E-51	-1.69E-46
MS.gene059536	MS.gene46239	0.80648	8.06E-50	-1.69E-46
MS.gene059597	MS.gene46239	0.816247	6.10E-52	-1.69E-46
MS.gene059676	MS.gene46239	0.8453	4.43E-59	-1.69E-46
MS.gene059688	MS.gene46239	0.904679	9.54E-80	-1.69E-46
MS.gene059692	MS.gene46239	0.89276	1.18E-74	-1.69E-46
MS.gene059695	MS.gene46239	0.896119	5.01E-76	-1.69E-46
MS.gene059711	MS.gene46239	0.816112	6.54E-52	-1.69E-46
MS.gene059807	MS.gene46239	0.840642	7.69E-58	-1.69E-46
MS.gene05984	MS.gene46239	0.811764	5.95E-51	-1.69E-46
MS.gene059894	MS.gene46239	0.822431	2.38E-53	-1.69E-46
MS.gene059960	MS.gene46239	0.805808	1.12E-49	-1.69E-46
MS.gene060372	MS.gene46239	0.80127	9.75E-49	-1.69E-46
MS.gene06037	MS.gene46239	0.81675	4.71E-52	-1.69E-46
MS.gene060403	MS.gene46239	0.875236	3.61E-68	-1.69E-46
MS.gene060804	MS.gene46239	0.85508	8.02E-62	-1.69E-46
MS.gene060818	MS.gene46239	0.807549	4.79E-50	-1.69E-46
MS.gene060835	MS.gene46239	0.848348	6.49E-60	-1.69E-46
MS.gene060837	MS.gene46239	0.839978	1.15E-57	-1.69E-46
MS.gene06092	MS.gene46239	0.808828	2.56E-50	-1.69E-46
MS.gene061041	MS.gene46239	0.825101	5.63E-54	-1.69E-46
MS.gene061049	MS.gene46239	0.873448	1.46E-67	-1.69E-46
MS.gene061051	MS.gene46239	-0.853812	1.87E-61	-1.69E-46
MS.gene061154	MS.gene46239	0.889862	1.66E-73	-1.69E-46
MS.gene061159	MS.gene46239	0.848544	5.73E-60	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46239.t1	MTR_3g088645	100.000	132	0	0	1	132	83	214	6.33e-99	282

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46239.t1	AT4G37925	78.862	123	26	0	4	126	84	206	1.37e-74	221

Find 32 sgRNAs with CRISPR-Local

Find 52 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGATCAAAAGCACTGGTTTC+TGG	0.141947	3.1:-71640100	None:intergenic
CTTGGTCTATTCTTACTTTC+AGG	0.183071	3.1:+71640195	MS.gene46239:CDS
CATCAGTAGGATCAAGAATA+AGG	0.246691	3.1:-71640144	None:intergenic
CAAGGCATGACCAGGGAATA+TGG	0.310643	3.1:+71640019	None:intergenic
TAGACCAAGTTGCAAGTATC+AGG	0.336990	3.1:-71640181	None:intergenic
TCTCAAGTACTAGCATCTTC+AGG	0.350319	3.1:-71640901	None:intergenic
GAATACACACTTCGGTTGAT+TGG	0.380394	3.1:+71640751	MS.gene46239:CDS
TTCTTACTTTCAGGAGCTTG+TGG	0.404103	3.1:+71640204	MS.gene46239:CDS
ATAAGAAAGTTGTTATATGA+TGG	0.419220	3.1:+71640793	MS.gene46239:CDS
CGAAGTGTGTATTCATTCAA+TGG	0.452108	3.1:-71640742	None:intergenic
CTGAGTTTGATCAAAAGCAC+TGG	0.490193	3.1:-71640107	None:intergenic
ATCAGTAGGATCAAGAATAA+GGG	0.496505	3.1:-71640143	None:intergenic
TAAAAGATCAAGGCATGACC+AGG	0.521510	3.1:+71640011	None:intergenic
TCAAGTATAATATGAATGCA+AGG	0.530324	3.1:+71640821	MS.gene46239:CDS
CCACTGTCCTCCATATTCCC+TGG	0.567133	3.1:-71640029	None:intergenic
AGGGTTCTGAATTTCAGCAT+GGG	0.568039	3.1:+71640841	MS.gene46239:CDS
CAAGTATAATATGAATGCAA+GGG	0.571561	3.1:+71640822	MS.gene46239:CDS
ATCCTACTGATGAGTTTGTG+TGG	0.588183	3.1:+71640155	MS.gene46239:CDS
AAGGGTTCTGAATTTCAGCA+TGG	0.591866	3.1:+71640840	MS.gene46239:CDS
GAATCCTGATACTTGCAACT+TGG	0.593694	3.1:+71640177	MS.gene46239:CDS
GGAGCTTGTGGATCACTATG+AGG	0.594812	3.1:+71640216	MS.gene46239:CDS
AAGTACTAGCATCTTCAGGT+TGG	0.600680	3.1:-71640897	None:intergenic
CATTGAATGAATACACACTT+CGG	0.613957	3.1:+71640743	MS.gene46239:CDS
GGGTTCTGAATTTCAGCATG+GGG	0.628137	3.1:+71640842	MS.gene46239:CDS
ATTTCAGCATGGGGAAGCCA+CGG	0.628788	3.1:+71640851	MS.gene46239:CDS
TTCCACACAAACTCATCAGT+AGG	0.644633	3.1:-71640157	None:intergenic
TTGTTGTTGAACATGATCCG+TGG	0.663996	3.1:-71640868	None:intergenic
ATAGATCCTCACATGTCGCG+TGG	0.684738	3.1:-71640062	None:intergenic
AAAAGATCAAGGCATGACCA+GGG	0.707335	3.1:+71640012	None:intergenic
CCAGGGAATATGGAGGACAG+TGG	0.721629	3.1:+71640029	MS.gene46239:CDS
GCTGTGCCACGCGACATGTG+AGG	0.722585	3.1:+71640056	MS.gene46239:CDS
GGCATGACCAGGGAATATGG+AGG	0.766490	3.1:+71640022	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATAAAATATCAATACA+AGG	+	chr3.1:71640384-71640403	MS.gene46239:intron	10.0%
!!	ATATAATTCTAACACTTAAT+TGG	-	chr3.1:71640691-71640710	None:intergenic	15.0%
!!	TGTATATTTGATTATGTTTA+AGG	-	chr3.1:71640248-71640267	None:intergenic	15.0%
!!	ATAAGAAAGTTGTTATATGA+TGG	+	chr3.1:71640793-71640812	MS.gene46239:CDS	20.0%
!!!	CTTTTTGATAATTGAAAACA+GGG	+	chr3.1:71640715-71640734	MS.gene46239:intron	20.0%
!	AAATATCAATACAAGGATAG+AGG	+	chr3.1:71640391-71640410	MS.gene46239:intron	25.0%
!	CAAGTATAATATGAATGCAA+GGG	+	chr3.1:71640822-71640841	MS.gene46239:CDS	25.0%
!	TCAAGTATAATATGAATGCA+AGG	+	chr3.1:71640821-71640840	MS.gene46239:CDS	25.0%
!	TGTCTAAAAGGTAAATAAAG+TGG	-	chr3.1:71640521-71640540	None:intergenic	25.0%
!!	ATAATTTAAGACTAGCATGT+AGG	+	chr3.1:71640317-71640336	MS.gene46239:intron	25.0%
!!	CCTGTTTTCAATTATCAAAA+AGG	-	chr3.1:71640717-71640736	None:intergenic	25.0%
!!!	ACATGCTAGTCTTAAATTAT+AGG	-	chr3.1:71640317-71640336	None:intergenic	25.0%
!!!	CCTTTTTGATAATTGAAAAC+AGG	+	chr3.1:71640714-71640733	MS.gene46239:intron	25.0%
	AGTTGTTAATCCAAAAAGCT+AGG	+	chr3.1:71640620-71640639	MS.gene46239:intron	30.0%
	ATCAGTAGGATCAAGAATAA+GGG	-	chr3.1:71640146-71640165	None:intergenic	30.0%
	CAATTCGAAGTTTGTCTAAA+AGG	-	chr3.1:71640533-71640552	None:intergenic	30.0%
	CATTGAATGAATACACACTT+CGG	+	chr3.1:71640743-71640762	MS.gene46239:CDS	30.0%
	TAATCCAAAAAGCTAGGAAA+AGG	+	chr3.1:71640626-71640645	MS.gene46239:intron	30.0%
!!	TTTTCCTTTTCCTAGCTTTT+TGG	-	chr3.1:71640633-71640652	None:intergenic	30.0%
	AGACAAACTTCGAATTGTCA+AGG	+	chr3.1:71640536-71640555	MS.gene46239:intron	35.0%
	CATCAGTAGGATCAAGAATA+AGG	-	chr3.1:71640147-71640166	None:intergenic	35.0%
	CCGAAAAATTCACCTTTAAC+CGG	-	chr3.1:71640454-71640473	None:intergenic	35.0%
	CGAAGTGTGTATTCATTCAA+TGG	-	chr3.1:71640745-71640764	None:intergenic	35.0%
	CTTGGTCTATTCTTACTTTC+AGG	+	chr3.1:71640195-71640214	MS.gene46239:CDS	35.0%
!	CCGGTTAAAGGTGAATTTTT+CGG	+	chr3.1:71640451-71640470	MS.gene46239:intron	35.0%
!	CTACATATTTTGCTAAGCAG+AGG	-	chr3.1:71640343-71640362	None:intergenic	35.0%
!	TGCTTTTGATCAAACTCAGA+TGG	+	chr3.1:71640111-71640130	MS.gene46239:CDS	35.0%
	AAGTACTAGCATCTTCAGGT+TGG	-	chr3.1:71640900-71640919	None:intergenic	40.0%
	ATCCTACTGATGAGTTTGTG+TGG	+	chr3.1:71640155-71640174	MS.gene46239:CDS	40.0%
	GAAATGATTGAGAGCTCAAG+CGG	+	chr3.1:71640418-71640437	MS.gene46239:intron	40.0%
	GAATACACACTTCGGTTGAT+TGG	+	chr3.1:71640751-71640770	MS.gene46239:CDS	40.0%
	GAATCCTGATACTTGCAACT+TGG	+	chr3.1:71640177-71640196	MS.gene46239:CDS	40.0%
	GACTAAGAATTGTTCTCGTC+AGG	-	chr3.1:71640495-71640514	None:intergenic	40.0%
	TAGACCAAGTTGCAAGTATC+AGG	-	chr3.1:71640184-71640203	None:intergenic	40.0%
	TTCCACACAAACTCATCAGT+AGG	-	chr3.1:71640160-71640179	None:intergenic	40.0%
	TTCTTACTTTCAGGAGCTTG+TGG	+	chr3.1:71640204-71640223	MS.gene46239:CDS	40.0%
!	AGGCTTCATTACTCTGAAAG+CGG	+	chr3.1:71640556-71640575	MS.gene46239:intron	40.0%
!	CTGAGTTTGATCAAAAGCAC+TGG	-	chr3.1:71640110-71640129	None:intergenic	40.0%
!	TTGTTGTTGAACATGATCCG+TGG	-	chr3.1:71640871-71640890	None:intergenic	40.0%
!!	AAGGGTTCTGAATTTCAGCA+TGG	+	chr3.1:71640840-71640859	MS.gene46239:CDS	40.0%
!!	AGGGTTCTGAATTTCAGCAT+GGG	+	chr3.1:71640841-71640860	MS.gene46239:CDS	40.0%
!!	TGATCAAAAGCACTGGTTTC+TGG	-	chr3.1:71640103-71640122	None:intergenic	40.0%
!!	GGGTTCTGAATTTCAGCATG+GGG	+	chr3.1:71640842-71640861	MS.gene46239:CDS	45.0%
!!	GGTTGATGAACTCCGGTTAA+AGG	+	chr3.1:71640439-71640458	MS.gene46239:intron	45.0%
!!	TCTGAAAGCGGATTGTCTCA+AGG	+	chr3.1:71640568-71640587	MS.gene46239:intron	45.0%
	ATAGATCCTCACATGTCGCG+TGG	-	chr3.1:71640065-71640084	None:intergenic	50.0%
	ATTTCAGCATGGGGAAGCCA+CGG	+	chr3.1:71640851-71640870	MS.gene46239:CDS	50.0%
	GGAGCTTGTGGATCACTATG+AGG	+	chr3.1:71640216-71640235	MS.gene46239:CDS	50.0%
!!	CTCAAGCGGTTGATGAACTC+CGG	+	chr3.1:71640432-71640451	MS.gene46239:intron	50.0%
	CCACTGTCCTCCATATTCCC+TGG	-	chr3.1:71640032-71640051	None:intergenic	55.0%
	CCAGGGAATATGGAGGACAG+TGG	+	chr3.1:71640029-71640048	MS.gene46239:CDS	55.0%
	GCTGTGCCACGCGACATGTG+AGG	+	chr3.1:71640056-71640075	MS.gene46239:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	71640025	71640921	71640025	ID=MS.gene46239
chr3.1	mRNA	71640025	71640921	71640025	ID=MS.gene46239.t1;Parent=MS.gene46239
chr3.1	exon	71640025	71640237	71640025	ID=MS.gene46239.t1.exon1;Parent=MS.gene46239.t1
chr3.1	CDS	71640025	71640237	71640025	ID=cds.MS.gene46239.t1;Parent=MS.gene46239.t1
chr3.1	exon	71640736	71640921	71640736	ID=MS.gene46239.t1.exon2;Parent=MS.gene46239.t1
chr3.1	CDS	71640736	71640921	71640736	ID=cds.MS.gene46239.t1;Parent=MS.gene46239.t1

Gene Sequence

>MS.gene46239

ATGACCAGGGAATATGGAGGACAGTGGTTGAGCTGTGCCACGCGACATGTGAGGATCTATGCAGCTTATATTGATCCAGAAACCAGTGCTTTTGATCAAACTCAGATGGATAAACTCACCCTTATTCTTGATCCTACTGATGAGTTTGTGTGGAATCCTGATACTTGCAACTTGGTCTATTCTTACTTTCAGGAGCTTGTGGATCACTATGAGGTAGTTTCCTTAAACATAATCAAATATACAATAGTTTTTGTCTTAGAATAGTGTCACATATACTGAATTTACATATCCTATAATTTAAGACTAGCATGTAGGCCTCTGCTTAGCAAAATATGTAGAAAAAACATGAAAAGTGATGCAAAAATAAAATATCAATACAAGGATAGAGGAAACGAAATGATTGAGAGCTCAAGCGGTTGATGAACTCCGGTTAAAGGTGAATTTTTCGGAAGTATTCGAGTTCAAATCCTGACGAGAACAATTCTTAGTCAGACCACTTTATTTACCTTTTAGACAAACTTCGAATTGTCAAGGCTTCATTACTCTGAAAGCGGATTGTCTCAAGGCTTAATAATTTAAATTTTGTAACAGTGCTAGTTGTTAATCCAAAAAGCTAGGAAAAGGAAAAATATAATTAGATTTTAGTTATGTGCTAGTTTTGAGCCAATTAAGTGTTAGAATTATATTAACCTTTTTGATAATTGAAAACAGGGTGCTCCATTGAATGAATACACACTTCGGTTGATTGGTTCAGACATAGAGCATTATATAAGAAAGTTGTTATATGATGGAGTAATCAAGTATAATATGAATGCAAGGGTTCTGAATTTCAGCATGGGGAAGCCACGGATCATGTTCAACAACAATGATATCCAACCTGAAGATGCTAGTACTTGA

Protein sequence

>MS.gene46239.t1

MTREYGGQWLSCATRHVRIYAAYIDPETSAFDQTQMDKLTLILDPTDEFVWNPDTCNLVYSYFQELVDHYEGAPLNEYTLRLIGSDIEHYIRKLLYDGVIKYNMNARVLNFSMGKPRIMFNNNDIQPEDAST