Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72372.t1 | XP_013457577.1 | 92.7 | 822 | 52 | 3 | 1 | 821 | 1 | 815 | 0.00E+00 | 1454.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72372.t1 | Q9M7K4 | 57.2 | 804 | 304 | 6 | 23 | 821 | 17 | 785 | 6.9e-254 | 878.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72372.t1 | A0A072URB2 | 92.7 | 822 | 52 | 3 | 1 | 821 | 1 | 815 | 0.0e+00 | 1454.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene72372 | -0.829536 | 4.87E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene72372 | -0.847836 | 8.99E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene72372 | -0.842813 | 2.06E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene72372 | -0.836475 | 9.16E-57 | -1.69E-46 |
| MS.gene049281 | MS.gene72372 | 0.800323 | 1.52E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene72372 | -0.816796 | 4.60E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene72372 | -0.839204 | 1.82E-57 | -1.69E-46 |
| MS.gene049549 | MS.gene72372 | 0.824263 | 8.87E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene72372 | -0.836294 | 1.02E-56 | -1.69E-46 |
| MS.gene049611 | MS.gene72372 | 0.805355 | 1.39E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene72372 | -0.832011 | 1.21E-55 | -1.69E-46 |
| MS.gene049634 | MS.gene72372 | 0.826729 | 2.31E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene72372 | -0.822837 | 1.91E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene72372 | -0.823894 | 1.08E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene72372 | -0.818836 | 1.59E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene72372 | -0.815274 | 1.01E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene72372 | 0.835641 | 1.49E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene72372 | -0.801624 | 8.25E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene72372 | -0.823487 | 1.35E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene72372 | -0.810533 | 1.10E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene72372 | -0.812235 | 4.70E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene72372 | -0.818445 | 1.95E-52 | -1.69E-46 |
| MS.gene050647 | MS.gene72372 | 0.812322 | 4.49E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene72372 | -0.815062 | 1.12E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene72372 | -0.817911 | 2.58E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene72372 | -0.81327 | 2.79E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene72372 | -0.847359 | 1.22E-59 | -1.69E-46 |
| MS.gene05079 | MS.gene72372 | 0.816557 | 5.20E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene72372 | -0.821999 | 2.99E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene72372 | -0.81327 | 2.79E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene72372 | -0.810033 | 1.41E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene72372 | -0.80574 | 1.15E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene72372 | -0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene72372 | 0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene72372 | 0.827181 | 1.80E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene72372 | 0.801735 | 7.83E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene72372 | 0.806288 | 8.85E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene72372 | 0.817145 | 3.84E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene72372 | 0.809646 | 1.71E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene72372 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene72372 | -0.834962 | 2.21E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene72372 | -0.809669 | 1.69E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene72372 | -0.845792 | 3.26E-59 | -1.69E-46 |
| MS.gene051874 | MS.gene72372 | -0.813234 | 2.84E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene72372 | -0.849467 | 3.17E-60 | -1.69E-46 |
| MS.gene052211 | MS.gene72372 | 0.821034 | 5.00E-53 | -1.69E-46 |
| MS.gene05240 | MS.gene72372 | 0.845436 | 4.07E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene72372 | -0.819847 | 9.37E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene72372 | -0.807678 | 4.49E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene72372 | -0.80378 | 2.96E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene72372 | -0.813583 | 2.38E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene72372 | -0.808557 | 2.92E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene72372 | -0.814505 | 1.49E-51 | -1.69E-46 |
| MS.gene053031 | MS.gene72372 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene72372 | -0.830093 | 3.57E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene72372 | -0.820371 | 7.11E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene72372 | -0.806614 | 7.55E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene72372 | 0.842567 | 2.39E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene72372 | 0.847121 | 1.41E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene72372 | -0.82888 | 7.03E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene72372 | -0.825051 | 5.79E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene72372 | -0.826954 | 2.04E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene72372 | -0.802375 | 5.78E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene72372 | -0.830835 | 2.35E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene72372 | -0.808271 | 3.36E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene72372 | -0.801762 | 7.73E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene72372 | -0.830404 | 2.99E-55 | -1.69E-46 |
| MS.gene054706 | MS.gene72372 | 0.822462 | 2.34E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene72372 | -0.838784 | 2.34E-57 | -1.69E-46 |
| MS.gene05483 | MS.gene72372 | 0.820088 | 8.25E-53 | -1.69E-46 |
| MS.gene054884 | MS.gene72372 | 0.803761 | 2.99E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene72372 | -0.813615 | 2.34E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene72372 | -0.801643 | 8.17E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene72372 | -0.811673 | 6.22E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene72372 | 0.820419 | 6.93E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene72372 | -0.821813 | 3.31E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene72372 | -0.81663 | 5.01E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene72372 | -0.837372 | 5.40E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene72372 | -0.826767 | 2.26E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene72372 | -0.840768 | 7.13E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene72372 | -0.829246 | 5.73E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene72372 | -0.805095 | 1.58E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene72372 | -0.8326 | 8.62E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene72372 | -0.820104 | 8.18E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene72372 | -0.807066 | 6.06E-50 | -1.69E-46 |
| MS.gene056224 | MS.gene72372 | 0.800221 | 1.60E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene72372 | -0.824145 | 9.46E-54 | -1.69E-46 |
| MS.gene056549 | MS.gene72372 | -0.808503 | 3.00E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene72372 | 0.828636 | 8.05E-55 | -1.69E-46 |
| MS.gene056591 | MS.gene72372 | 0.827102 | 1.88E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene72372 | -0.825836 | 3.77E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene72372 | -0.829778 | 4.26E-55 | -1.69E-46 |
| MS.gene056856 | MS.gene72372 | 0.829212 | 5.84E-55 | -1.69E-46 |
| MS.gene056946 | MS.gene72372 | -0.808968 | 2.39E-50 | -1.69E-46 |
| MS.gene057048 | MS.gene72372 | -0.800995 | 1.11E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene72372 | -0.804264 | 2.35E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene72372 | -0.808914 | 2.45E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene72372 | -0.809271 | 2.05E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene72372 | -0.806124 | 9.58E-50 | -1.69E-46 |
| MS.gene057261 | MS.gene72372 | 0.834154 | 3.53E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene72372 | -0.82275 | 2.00E-53 | -1.69E-46 |
| MS.gene057544 | MS.gene72372 | 0.808022 | 3.80E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene72372 | -0.806257 | 8.98E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene72372 | -0.802732 | 4.88E-49 | -1.69E-46 |
| MS.gene058067 | MS.gene72372 | 0.817848 | 2.67E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene72372 | 0.823638 | 1.24E-53 | -1.69E-46 |
| MS.gene058099 | MS.gene72372 | 0.815903 | 7.28E-52 | -1.69E-46 |
| MS.gene058117 | MS.gene72372 | 0.814276 | 1.67E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene72372 | 0.814627 | 1.40E-51 | -1.69E-46 |
| MS.gene058269 | MS.gene72372 | 0.809522 | 1.82E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene72372 | 0.814876 | 1.23E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene72372 | -0.818199 | 2.22E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene72372 | -0.824117 | 9.60E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene72372 | -0.848511 | 5.85E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene72372 | -0.83479 | 2.44E-56 | -1.69E-46 |
| MS.gene058603 | MS.gene72372 | 0.816718 | 4.79E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene72372 | -0.820573 | 6.39E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene72372 | -0.807869 | 4.09E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene72372 | -0.84259 | 2.36E-58 | -1.69E-46 |
| MS.gene05883 | MS.gene72372 | -0.812285 | 4.58E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene72372 | 0.800511 | 1.39E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene72372 | -0.835088 | 2.06E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene72372 | -0.832428 | 9.50E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene72372 | -0.809398 | 1.93E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene72372 | -0.802943 | 4.41E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene72372 | -0.818366 | 2.04E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene72372 | -0.835631 | 1.50E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene72372 | -0.839924 | 1.18E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene72372 | -0.822268 | 2.59E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene72372 | -0.84342 | 1.42E-58 | -1.69E-46 |
| MS.gene059953 | MS.gene72372 | 0.847237 | 1.31E-59 | -1.69E-46 |
| MS.gene059955 | MS.gene72372 | 0.8463 | 2.37E-59 | -1.69E-46 |
| MS.gene060405 | MS.gene72372 | 0.83275 | 7.91E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene72372 | -0.844412 | 7.68E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene72372 | -0.827829 | 1.26E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene72372 | -0.803438 | 3.49E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene72372 | -0.806338 | 8.64E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene72372 | -0.821087 | 4.86E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene72372 | -0.808261 | 3.38E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene72372 | -0.832395 | 9.69E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72372.t1 | MTR_4g099260 | 92.701 | 822 | 52 | 3 | 1 | 821 | 1 | 815 | 0.0 | 1527 |
| MS.gene72372.t1 | MTR_8g022130 | 61.707 | 820 | 254 | 10 | 5 | 821 | 4 | 766 | 0.0 | 1023 |
| MS.gene72372.t1 | MTR_8g088200 | 61.654 | 798 | 280 | 7 | 32 | 821 | 3 | 782 | 0.0 | 982 |
| MS.gene72372.t1 | MTR_7g108480 | 51.673 | 807 | 323 | 7 | 21 | 821 | 28 | 773 | 0.0 | 846 |
| MS.gene72372.t1 | MTR_8g063900 | 52.149 | 698 | 309 | 7 | 8 | 685 | 6 | 698 | 0.0 | 738 |
| MS.gene72372.t1 | MTR_8g063900 | 35.088 | 114 | 67 | 3 | 713 | 821 | 634 | 745 | 1.74e-14 | 78.2 |
| MS.gene72372.t1 | MTR_8g063840 | 46.725 | 794 | 402 | 9 | 35 | 821 | 61 | 840 | 0.0 | 716 |
| MS.gene72372.t1 | MTR_2g008820 | 43.632 | 793 | 422 | 7 | 38 | 821 | 73 | 849 | 0.0 | 672 |
| MS.gene72372.t1 | MTR_3g094090 | 44.070 | 801 | 416 | 10 | 42 | 819 | 1 | 792 | 0.0 | 661 |
| MS.gene72372.t1 | MTR_5g070670 | 43.125 | 800 | 416 | 8 | 38 | 821 | 73 | 849 | 0.0 | 655 |
| MS.gene72372.t1 | MTR_6g007697 | 42.405 | 790 | 396 | 10 | 61 | 821 | 17 | 776 | 0.0 | 653 |
| MS.gene72372.t1 | MTR_2g438150 | 43.665 | 813 | 418 | 14 | 20 | 821 | 6 | 789 | 0.0 | 648 |
| MS.gene72372.t1 | MTR_2g438150 | 43.936 | 808 | 413 | 14 | 20 | 816 | 6 | 784 | 0.0 | 648 |
| MS.gene72372.t1 | MTR_6g033165 | 43.017 | 802 | 420 | 9 | 38 | 821 | 37 | 819 | 0.0 | 644 |
| MS.gene72372.t1 | MTR_4g094660 | 44.541 | 806 | 416 | 11 | 22 | 821 | 7 | 787 | 0.0 | 640 |
| MS.gene72372.t1 | MTR_5g034500 | 41.782 | 797 | 432 | 8 | 42 | 821 | 1 | 782 | 0.0 | 624 |
| MS.gene72372.t1 | MTR_5g071860 | 38.930 | 804 | 431 | 10 | 24 | 821 | 5 | 754 | 0.0 | 589 |
| MS.gene72372.t1 | MTR_2g438160 | 47.819 | 619 | 312 | 8 | 20 | 632 | 6 | 619 | 0.0 | 564 |
| MS.gene72372.t1 | MTR_8g099090 | 40.283 | 777 | 429 | 12 | 67 | 821 | 29 | 792 | 0.0 | 550 |
| MS.gene72372.t1 | MTR_5g071630 | 38.983 | 767 | 406 | 12 | 65 | 821 | 11 | 725 | 0.0 | 550 |
| MS.gene72372.t1 | MTR_5g071827 | 39.542 | 698 | 385 | 8 | 127 | 821 | 3 | 666 | 7.83e-177 | 525 |
| MS.gene72372.t1 | MTR_4g094660 | 44.872 | 624 | 316 | 8 | 203 | 821 | 1 | 601 | 3.92e-165 | 492 |
| MS.gene72372.t1 | MTR_3g094090 | 42.149 | 605 | 332 | 5 | 229 | 819 | 7 | 607 | 4.64e-162 | 484 |
| MS.gene72372.t1 | MTR_8g107510 | 34.418 | 799 | 470 | 11 | 53 | 821 | 8 | 782 | 7.09e-161 | 487 |
| MS.gene72372.t1 | MTR_8g022160 | 63.485 | 241 | 77 | 4 | 5 | 243 | 4 | 235 | 4.86e-93 | 293 |
| MS.gene72372.t1 | MTR_5g034590 | 38.953 | 172 | 105 | 0 | 459 | 630 | 88 | 259 | 7.66e-40 | 151 |
| MS.gene72372.t1 | MTR_1g029310 | 41.732 | 127 | 62 | 4 | 213 | 335 | 12 | 130 | 2.70e-20 | 88.2 |
| MS.gene72372.t1 | MTR_6g045057 | 39.850 | 133 | 75 | 3 | 226 | 356 | 19 | 148 | 1.88e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72372.t1 | AT4G13420 | 58.831 | 804 | 291 | 8 | 23 | 821 | 17 | 785 | 0.0 | 963 |
| MS.gene72372.t1 | AT1G60160 | 44.952 | 832 | 421 | 8 | 4 | 821 | 19 | 827 | 0.0 | 746 |
| MS.gene72372.t1 | AT5G14880 | 44.713 | 785 | 400 | 10 | 54 | 819 | 10 | 779 | 0.0 | 658 |
| MS.gene72372.t1 | AT4G33530 | 43.090 | 796 | 421 | 7 | 39 | 821 | 79 | 855 | 0.0 | 655 |
| MS.gene72372.t1 | AT2G40540 | 42.443 | 794 | 439 | 7 | 42 | 819 | 1 | 792 | 0.0 | 655 |
| MS.gene72372.t1 | AT2G40540 | 42.443 | 794 | 439 | 7 | 42 | 819 | 1 | 792 | 0.0 | 655 |
| MS.gene72372.t1 | AT2G40540 | 42.443 | 794 | 439 | 7 | 42 | 819 | 1 | 792 | 0.0 | 655 |
| MS.gene72372.t1 | AT2G40540 | 42.443 | 794 | 439 | 7 | 42 | 819 | 1 | 792 | 0.0 | 655 |
| MS.gene72372.t1 | AT2G40540 | 42.443 | 794 | 439 | 7 | 42 | 819 | 1 | 792 | 0.0 | 655 |
| MS.gene72372.t1 | AT2G35060 | 43.881 | 809 | 418 | 11 | 20 | 821 | 13 | 792 | 0.0 | 642 |
| MS.gene72372.t1 | AT2G35060 | 43.881 | 809 | 418 | 11 | 20 | 821 | 13 | 792 | 0.0 | 642 |
| MS.gene72372.t1 | AT2G35060 | 43.881 | 809 | 418 | 11 | 20 | 821 | 13 | 792 | 0.0 | 642 |
| MS.gene72372.t1 | AT2G35060 | 43.827 | 810 | 418 | 12 | 20 | 821 | 13 | 793 | 0.0 | 637 |
| MS.gene72372.t1 | AT1G31120 | 44.020 | 811 | 418 | 11 | 20 | 821 | 13 | 796 | 0.0 | 635 |
| MS.gene72372.t1 | AT5G09400 | 42.715 | 803 | 420 | 9 | 38 | 821 | 77 | 858 | 0.0 | 634 |
| MS.gene72372.t1 | AT4G19960 | 43.086 | 810 | 434 | 9 | 23 | 821 | 14 | 807 | 0.0 | 625 |
| MS.gene72372.t1 | AT1G70300 | 41.645 | 778 | 432 | 7 | 58 | 821 | 13 | 782 | 0.0 | 623 |
| MS.gene72372.t1 | AT4G19960 | 42.252 | 826 | 434 | 10 | 23 | 821 | 14 | 823 | 0.0 | 615 |
| MS.gene72372.t1 | AT4G19960 | 41.746 | 836 | 434 | 10 | 23 | 821 | 14 | 833 | 0.0 | 610 |
| MS.gene72372.t1 | AT3G02050 | 41.582 | 784 | 437 | 7 | 52 | 821 | 13 | 789 | 0.0 | 585 |
| MS.gene72372.t1 | AT2G30070 | 45.351 | 613 | 328 | 3 | 51 | 657 | 12 | 623 | 0.0 | 580 |
| MS.gene72372.t1 | AT4G23640 | 39.689 | 771 | 440 | 8 | 65 | 819 | 12 | 773 | 0.0 | 577 |
| MS.gene72372.t1 | AT4G33530 | 42.180 | 633 | 336 | 5 | 200 | 821 | 14 | 627 | 7.24e-173 | 513 |
| MS.gene72372.t1 | AT4G19960 | 41.833 | 600 | 330 | 3 | 227 | 821 | 1 | 586 | 5.27e-160 | 478 |
| MS.gene72372.t1 | AT2G30070 | 44.732 | 503 | 274 | 2 | 158 | 657 | 2 | 503 | 4.59e-156 | 468 |
Find 154 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATATGGTTTACATTTAT+TGG | 0.125815 | 8.3:+21396723 | MS.gene72372:CDS |
| TGACAATAATTATGGGAATT+TGG | 0.164270 | 8.3:+21398380 | MS.gene72372:CDS |
| AAGTAATCAACAATATATTT+TGG | 0.188421 | 8.3:-21396804 | None:intergenic |
| TTGTTCAAAACGGAAGAATT+TGG | 0.197103 | 8.3:-21399141 | None:intergenic |
| TTATATGGAAGAGGAGTTTA+TGG | 0.203838 | 8.3:+21398245 | MS.gene72372:CDS |
| TGAGGCCATGTTTGCTGATT+TGG | 0.205167 | 8.3:+21396973 | MS.gene72372:CDS |
| ATTCTCACTCCATCTATTTC+AGG | 0.216313 | 8.3:+21394137 | MS.gene72372:CDS |
| GGGCATCACCGTAGCAATTT+TGG | 0.256771 | 8.3:+21396635 | MS.gene72372:CDS |
| GCAATATTGATAGCATATAT+TGG | 0.264512 | 8.3:+21397299 | MS.gene72372:CDS |
| GCTAGTCAAGCAATGATTTC+AGG | 0.264683 | 8.3:+21397891 | MS.gene72372:CDS |
| CACTTATAATGCTTGTTATA+TGG | 0.270739 | 8.3:+21398230 | MS.gene72372:CDS |
| CCAACATTTGTTGTGGCTAT+TGG | 0.271020 | 8.3:+21397855 | MS.gene72372:CDS |
| TACGTTCTTGACAATAATTA+TGG | 0.282502 | 8.3:+21398372 | MS.gene72372:CDS |
| CATGTCTTCAGGTTGTTGAT+TGG | 0.293896 | 8.3:-21393967 | None:intergenic |
| ATAAACTTTATTTCCTCTTC+AGG | 0.294343 | 8.3:-21399057 | None:intergenic |
| TCTTCAGGTCCTTGAATGAT+AGG | 0.318939 | 8.3:-21399042 | None:intergenic |
| CATTTGATCACTCTCATTAG+TGG | 0.324843 | 8.3:-21398875 | None:intergenic |
| CAAATCGTTGCATACAAAAT+AGG | 0.330136 | 8.3:-21396662 | None:intergenic |
| AATGTAGGGATTGCTGTTAT+TGG | 0.335979 | 8.3:+21398178 | MS.gene72372:intron |
| GTAAACCATATTAAAATAAC+TGG | 0.336183 | 8.3:-21396714 | None:intergenic |
| TTTACATTTATTGGTGGTAT+TGG | 0.340172 | 8.3:+21396732 | MS.gene72372:CDS |
| TTAGAGAGTTCCATGTCTTC+AGG | 0.342622 | 8.3:-21393978 | None:intergenic |
| ACTAAGGGCTTGTGATATAA+TGG | 0.344601 | 8.3:-21397922 | None:intergenic |
| TGTTCAAAACGGAAGAATTT+GGG | 0.345500 | 8.3:-21399140 | None:intergenic |
| GCTATAAAGTGAGGAAATAT+TGG | 0.350177 | 8.3:-21398547 | None:intergenic |
| GAGGCCATGTTTGCTGATTT+GGG | 0.352374 | 8.3:+21396974 | MS.gene72372:CDS |
| TCGTGTAGACTCTCTCAATT+TGG | 0.352874 | 8.3:+21389905 | MS.gene72372:CDS |
| ATGTCTTCAGGTTGTTGATT+GGG | 0.355101 | 8.3:-21393966 | None:intergenic |
| CATTGCTTGACTAGCTATAA+TGG | 0.356396 | 8.3:-21397883 | None:intergenic |
| CATTATATTCGTTGATATGT+AGG | 0.357181 | 8.3:+21393922 | MS.gene72372:CDS |
| TACCGAGTATTTGAAGGAAT+TGG | 0.359940 | 8.3:+21398453 | MS.gene72372:CDS |
| TCCGGTTAATAGAGTTGCTT+TGG | 0.361260 | 8.3:+21398621 | MS.gene72372:CDS |
| GGAATTGTATATGGTGATAT+TGG | 0.365329 | 8.3:+21390132 | MS.gene72372:CDS |
| ATCAACTACATGTTCTTGAT+TGG | 0.366077 | 8.3:+21398017 | MS.gene72372:CDS |
| CAAAGCATAGGAATTGTATA+TGG | 0.366388 | 8.3:+21390123 | MS.gene72372:CDS |
| GATCAAATGGAAGATATATT+AGG | 0.367516 | 8.3:+21398889 | MS.gene72372:CDS |
| CGTACCATTGCCATTGTCAT+TGG | 0.374037 | 8.3:-21390295 | None:intergenic |
| ACATGAGACGCACCTTTACT+TGG | 0.376739 | 8.3:-21398958 | None:intergenic |
| TTCTATGAACCTATCATTCA+AGG | 0.381237 | 8.3:+21399033 | MS.gene72372:CDS |
| CGTCTCTATCAAGACAATTC+CGG | 0.381259 | 8.3:+21398603 | MS.gene72372:CDS |
| GTTGATTACTTCAAACGAAA+TGG | 0.384165 | 8.3:+21396816 | MS.gene72372:CDS |
| CGAAATATTCTATACTCTCT+TGG | 0.385653 | 8.3:-21398673 | None:intergenic |
| AGGTTGTTTCCCTAGAGTTA+AGG | 0.386363 | 8.3:+21397947 | MS.gene72372:CDS |
| GTACACAGAGTGCCTGGAAT+TGG | 0.386790 | 8.3:+21398490 | MS.gene72372:CDS |
| TCACTCTCATTAGTGGAAAT+AGG | 0.392266 | 8.3:-21398868 | None:intergenic |
| TTAGGTAAAGAAGTGAAATC+AGG | 0.394365 | 8.3:+21398907 | MS.gene72372:CDS |
| ACTTGCAGGCAATGATCTAA+TGG | 0.402385 | 8.3:-21398992 | None:intergenic |
| ATATATGCTATCAATATTGC+AGG | 0.413376 | 8.3:-21397296 | None:intergenic |
| CAATATTGATAGCATATATT+GGG | 0.415101 | 8.3:+21397300 | MS.gene72372:CDS |
| TAGGCATATAAAGATGAGTT+TGG | 0.416280 | 8.3:+21393941 | MS.gene72372:CDS |
| TCCAAAGCAACTCTATTAAC+CGG | 0.418694 | 8.3:-21398622 | None:intergenic |
| TATAGATAAAGCAACAGAAA+AGG | 0.422805 | 8.3:+21399077 | MS.gene72372:CDS |
| TTGGAGCGTGACATTGAGTT+TGG | 0.427209 | 8.3:+21390095 | MS.gene72372:CDS |
| ACGTTCTTGACAATAATTAT+GGG | 0.428932 | 8.3:+21398373 | MS.gene72372:CDS |
| CACTAATGAGAGTGATCAAA+TGG | 0.433632 | 8.3:+21398876 | MS.gene72372:CDS |
| TATAACCAACCTGAAATAGA+TGG | 0.436195 | 8.3:-21394146 | None:intergenic |
| ATGGGAACTGCCATGGTCAT+AGG | 0.438096 | 8.3:+21394107 | MS.gene72372:CDS |
| CGCAAGAGGCTTCTCAAGGT+TGG | 0.438527 | 8.3:+21399237 | MS.gene72372:CDS |
| AAGAACGTAGCTAGTACAAT+TGG | 0.440233 | 8.3:-21398358 | None:intergenic |
| ATGCAAGTACTTTCACTAAA+GGG | 0.442408 | 8.3:+21390175 | MS.gene72372:CDS |
| AAGAACATGTAGTTGATCTC+TGG | 0.449490 | 8.3:-21398011 | None:intergenic |
| CGCCAATTCCTTCAAATACT+CGG | 0.451419 | 8.3:-21398455 | None:intergenic |
| GCAAGAGGCTTCTCAAGGTT+GGG | 0.451720 | 8.3:+21399238 | MS.gene72372:CDS |
| AAGGGAGTGGTATATATGAT+AGG | 0.453426 | 8.3:+21399096 | MS.gene72372:CDS |
| AATGAAAACGTATTTGATCA+TGG | 0.456981 | 8.3:-21390262 | None:intergenic |
| GAACACAACAACTGAATGAA+TGG | 0.460130 | 8.3:-21398581 | None:intergenic |
| GACTCTCTCAATTTGGAAGC+TGG | 0.465241 | 8.3:+21389912 | MS.gene72372:CDS |
| AGTTTCTACCGAGTATTTGA+AGG | 0.465367 | 8.3:+21398447 | MS.gene72372:CDS |
| TAGGGAAACAACCTAGACTA+AGG | 0.467128 | 8.3:-21397938 | None:intergenic |
| TATGCAAGTACTTTCACTAA+AGG | 0.469628 | 8.3:+21390174 | MS.gene72372:CDS |
| CTTGCGCAAGAACTTTAGAC+AGG | 0.474696 | 8.3:+21399191 | MS.gene72372:CDS |
| GTACTTGCATACACATAAAG+TGG | 0.475123 | 8.3:-21390162 | None:intergenic |
| ATAGAGTTGCTTTGGAAGAG+AGG | 0.476150 | 8.3:+21398629 | MS.gene72372:CDS |
| GTATGAACAACCTTAACTCT+AGG | 0.477403 | 8.3:-21397957 | None:intergenic |
| TGTCTTTCAGATGCTGTTGT+GGG | 0.478598 | 8.3:+21396615 | MS.gene72372:intron |
| CAAATAACCAAGTTCACAAA+AGG | 0.480606 | 8.3:+21398325 | MS.gene72372:CDS |
| TTTATGCTTGAGGTTAATGA+AGG | 0.481782 | 8.3:+21398796 | MS.gene72372:CDS |
| GAATACAAAAGTCCAATTCC+AGG | 0.482274 | 8.3:-21398502 | None:intergenic |
| AACATGCAGACCCCTTGTAT+TGG | 0.486115 | 8.3:+21397832 | MS.gene72372:intron |
| AACAAATGTTGGCCAATACA+AGG | 0.488082 | 8.3:-21397844 | None:intergenic |
| CGCGGTTACAATGATACGCT+TGG | 0.490134 | 8.3:+21398709 | MS.gene72372:CDS |
| ATGAAAACGTATTTGATCAT+GGG | 0.490731 | 8.3:-21390261 | None:intergenic |
| ATAGATAAAGCAACAGAAAA+GGG | 0.492768 | 8.3:+21399078 | MS.gene72372:CDS |
| AAAGAAGCTGAAAGATAGAA+AGG | 0.493465 | 8.3:+21389863 | MS.gene72372:CDS |
| GAGTGGGATCAGTACATCAC+TGG | 0.493870 | 8.3:+21396460 | MS.gene72372:CDS |
| GAAAATATCAGTCATGCCTA+TGG | 0.496765 | 8.3:+21398074 | MS.gene72372:CDS |
| ACAAATGTACACAGAGTGCC+TGG | 0.500015 | 8.3:+21398484 | MS.gene72372:CDS |
| ATGTCTTTCAGATGCTGTTG+TGG | 0.500747 | 8.3:+21396614 | MS.gene72372:intron |
| ATATGGTTTACATTTATTGG+TGG | 0.510397 | 8.3:+21396726 | MS.gene72372:CDS |
| TAATGCTTGTTATATGGAAG+AGG | 0.511261 | 8.3:+21398236 | MS.gene72372:CDS |
| GACAACAATCTTGTTCAAAA+CGG | 0.512405 | 8.3:-21399151 | None:intergenic |
| ACGATTTGGTACTGATAAAG+TGG | 0.520624 | 8.3:+21396677 | MS.gene72372:CDS |
| TTACTTCAAACGAAATGGTA+AGG | 0.525749 | 8.3:+21396821 | MS.gene72372:CDS |
| AGGAATTCCTTGCACAAGCT+CGG | 0.527714 | 8.3:-21398524 | None:intergenic |
| ATATCACAAGCCCTTAGTCT+AGG | 0.528128 | 8.3:+21397927 | MS.gene72372:CDS |
| CAATCAACAACCTGAAGACA+TGG | 0.532260 | 8.3:+21393968 | MS.gene72372:CDS |
| CCAATAGCCACAACAAATGT+TGG | 0.536355 | 8.3:-21397855 | None:intergenic |
| GCGGTTACAATGATACGCTT+GGG | 0.536786 | 8.3:+21398710 | MS.gene72372:CDS |
| TTCAAACGAAATGGTAAGGA+AGG | 0.540812 | 8.3:+21396825 | MS.gene72372:CDS |
| CATGAGACGCACCTTTACTT+GGG | 0.543470 | 8.3:-21398957 | None:intergenic |
| TGAAAGATAGAAAGGTGTCA+TGG | 0.543992 | 8.3:+21389871 | MS.gene72372:CDS |
| AATAGAATAATCCCAAGTAA+AGG | 0.545122 | 8.3:+21398946 | MS.gene72372:CDS |
| AACGAAATGGTAAGGAAGGA+TGG | 0.546490 | 8.3:+21396829 | MS.gene72372:CDS |
| CCTTGAGAAGCCTCTTGCGA+GGG | 0.548455 | 8.3:-21399233 | None:intergenic |
| AGCTATAATGGGAACTGCCA+TGG | 0.548694 | 8.3:+21394100 | MS.gene72372:CDS |
| CATACTTCAGCTAAGCATCA+AGG | 0.555262 | 8.3:+21397975 | MS.gene72372:CDS |
| AATCCCGTCACCTATGACCA+TGG | 0.555736 | 8.3:-21394117 | None:intergenic |
| GCATGAAGACCTTGGAATTG+TGG | 0.557135 | 8.3:-21389956 | None:intergenic |
| CTGCCATGGTCATAGGTGAC+GGG | 0.560649 | 8.3:+21394114 | MS.gene72372:CDS |
| CCCTCGCAAGAGGCTTCTCA+AGG | 0.570044 | 8.3:+21399233 | MS.gene72372:CDS |
| GTATTGGCCAACATTTGTTG+TGG | 0.570101 | 8.3:+21397848 | MS.gene72372:CDS |
| GTGACCCAAATCAGCAAACA+TGG | 0.571158 | 8.3:-21396978 | None:intergenic |
| TAGGTAAAGAAGTGAAATCA+GGG | 0.571749 | 8.3:+21398908 | MS.gene72372:CDS |
| TATGAACAACCTTAACTCTA+GGG | 0.573338 | 8.3:-21397956 | None:intergenic |
| TAATTGTGACTCAAATTCCA+CGG | 0.578225 | 8.3:-21398737 | None:intergenic |
| TATCATTCAAGGACCTGAAG+AGG | 0.578740 | 8.3:+21399044 | MS.gene72372:CDS |
| AGTTTGGCATTTCAAAGCAT+AGG | 0.578744 | 8.3:+21390111 | MS.gene72372:CDS |
| TTGTATTCCGAGCTTGTGCA+AGG | 0.579487 | 8.3:+21398517 | MS.gene72372:CDS |
| GAAAGATAGAAAGGTGTCAT+GGG | 0.579627 | 8.3:+21389872 | MS.gene72372:CDS |
| ATAAAGTGAGGAAATATTGG+AGG | 0.580170 | 8.3:-21398544 | None:intergenic |
| ATGGAAGAGGAGTTTATGGA+TGG | 0.581071 | 8.3:+21398249 | MS.gene72372:CDS |
| GAATATTTCGATGTGTTGCA+AGG | 0.582921 | 8.3:+21398686 | MS.gene72372:CDS |
| AATTGTGACTCAAATTCCAC+GGG | 0.583427 | 8.3:-21398736 | None:intergenic |
| ACAACAACTGAATGAATGGA+TGG | 0.583902 | 8.3:-21398577 | None:intergenic |
| ACAATTAATACAAAATCTCA+AGG | 0.584536 | 8.3:+21398753 | MS.gene72372:CDS |
| ACATTCTATGACAGTATACC+TGG | 0.590180 | 8.3:+21397365 | MS.gene72372:CDS |
| AACAGATCGAGTGAGCATAG+AGG | 0.593649 | 8.3:+21389809 | MS.gene72372:CDS |
| ACATATTATCATAGGATCTG+AGG | 0.596779 | 8.3:+21396955 | MS.gene72372:intron |
| ATAACCAAGTTCACAAAAGG+AGG | 0.599159 | 8.3:+21398328 | MS.gene72372:CDS |
| TATGTGTCATGCAGGTGGGT+TGG | 0.599730 | 8.3:+21390076 | MS.gene72372:intron |
| GTCTTATGGGCCAATGACAA+TGG | 0.601386 | 8.3:+21390285 | MS.gene72372:CDS |
| ACAAATGTTGGCCAATACAA+GGG | 0.602698 | 8.3:-21397843 | None:intergenic |
| ACCTTGAGAAGCCTCTTGCG+AGG | 0.603374 | 8.3:-21399234 | None:intergenic |
| TTTCGATGTGTTGCAAGGCG+CGG | 0.607397 | 8.3:+21398691 | MS.gene72372:CDS |
| GAATGCAAACCACAATTCCA+AGG | 0.608592 | 8.3:+21389947 | MS.gene72372:CDS |
| TAGGACAACCAAAATTGCTA+CGG | 0.609406 | 8.3:-21396643 | None:intergenic |
| ACTGCCATGGTCATAGGTGA+CGG | 0.609643 | 8.3:+21394113 | MS.gene72372:CDS |
| ATATATGATAGGTGAAGCAG+AGG | 0.610482 | 8.3:+21399107 | MS.gene72372:CDS |
| AGGGAAACAACCTAGACTAA+GGG | 0.612954 | 8.3:-21397937 | None:intergenic |
| TGAAAACGTATTTGATCATG+GGG | 0.614571 | 8.3:-21390260 | None:intergenic |
| CTATAGCAATCCCTCGCAAG+AGG | 0.615511 | 8.3:+21399223 | MS.gene72372:CDS |
| TAAAGCAACAGAAAAGGGAG+TGG | 0.618850 | 8.3:+21399083 | MS.gene72372:CDS |
| TGGGCCAATGACAATGGCAA+TGG | 0.620515 | 8.3:+21390291 | MS.gene72372:CDS |
| AAGGAAGGATGGCTATCACT+AGG | 0.622756 | 8.3:+21396840 | MS.gene72372:CDS |
| TTGCGCAAGAACTTTAGACA+GGG | 0.636029 | 8.3:+21399192 | MS.gene72372:CDS |
| CAGTGCTATCTGCAGTGAGT+GGG | 0.640451 | 8.3:+21396444 | MS.gene72372:intron |
| GCAGTGCTATCTGCAGTGAG+TGG | 0.640823 | 8.3:+21396443 | MS.gene72372:intron |
| CAAATGTTGGCCAATACAAG+GGG | 0.641147 | 8.3:-21397842 | None:intergenic |
| CGATTTGGTACTGATAAAGT+GGG | 0.645606 | 8.3:+21396678 | MS.gene72372:CDS |
| AGTGGGATCAGTACATCACT+GGG | 0.667534 | 8.3:+21396461 | MS.gene72372:CDS |
| GGTACACTAGCTATAAAGTG+AGG | 0.674589 | 8.3:-21398556 | None:intergenic |
| GGATGAGACAGAGACAACAA+AGG | 0.675047 | 8.3:+21389830 | MS.gene72372:CDS |
| TGATACGCTTGGGAATCCCG+TGG | 0.697305 | 8.3:+21398720 | MS.gene72372:CDS |
| GAAGGATGGCTATCACTAGG+TGG | 0.709671 | 8.3:+21396843 | MS.gene72372:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 21389795 | 21399278 | 21389795 | ID=MS.gene72372 |
| chr8.3 | mRNA | 21389795 | 21399278 | 21389795 | ID=MS.gene72372.t1;Parent=MS.gene72372 |
| chr8.3 | exon | 21389795 | 21389968 | 21389795 | ID=MS.gene72372.t1.exon1;Parent=MS.gene72372.t1 |
| chr8.3 | CDS | 21389795 | 21389968 | 21389795 | ID=cds.MS.gene72372.t1;Parent=MS.gene72372.t1 |
| chr8.3 | exon | 21390090 | 21390312 | 21390090 | ID=MS.gene72372.t1.exon2;Parent=MS.gene72372.t1 |
| chr8.3 | CDS | 21390090 | 21390312 | 21390090 | ID=cds.MS.gene72372.t1;Parent=MS.gene72372.t1 |
| chr8.3 | exon | 21393910 | 21394158 | 21393910 | ID=MS.gene72372.t1.exon3;Parent=MS.gene72372.t1 |
| chr8.3 | CDS | 21393910 | 21394158 | 21393910 | ID=cds.MS.gene72372.t1;Parent=MS.gene72372.t1 |
| chr8.3 | exon | 21396447 | 21396488 | 21396447 | ID=MS.gene72372.t1.exon4;Parent=MS.gene72372.t1 |
| chr8.3 | CDS | 21396447 | 21396488 | 21396447 | ID=cds.MS.gene72372.t1;Parent=MS.gene72372.t1 |
| chr8.3 | exon | 21396625 | 21396885 | 21396625 | ID=MS.gene72372.t1.exon5;Parent=MS.gene72372.t1 |
| chr8.3 | CDS | 21396625 | 21396885 | 21396625 | ID=cds.MS.gene72372.t1;Parent=MS.gene72372.t1 |
| chr8.3 | exon | 21396969 | 21397021 | 21396969 | ID=MS.gene72372.t1.exon6;Parent=MS.gene72372.t1 |
| chr8.3 | CDS | 21396969 | 21397021 | 21396969 | ID=cds.MS.gene72372.t1;Parent=MS.gene72372.t1 |
| chr8.3 | exon | 21397272 | 21397386 | 21397272 | ID=MS.gene72372.t1.exon7;Parent=MS.gene72372.t1 |
| chr8.3 | CDS | 21397272 | 21397386 | 21397272 | ID=cds.MS.gene72372.t1;Parent=MS.gene72372.t1 |
| chr8.3 | exon | 21397841 | 21398095 | 21397841 | ID=MS.gene72372.t1.exon8;Parent=MS.gene72372.t1 |
| chr8.3 | CDS | 21397841 | 21398095 | 21397841 | ID=cds.MS.gene72372.t1;Parent=MS.gene72372.t1 |
| chr8.3 | exon | 21398185 | 21399278 | 21398185 | ID=MS.gene72372.t1.exon9;Parent=MS.gene72372.t1 |
| chr8.3 | CDS | 21398185 | 21399278 | 21398185 | ID=cds.MS.gene72372.t1;Parent=MS.gene72372.t1 |
| Gene Sequence |
| Protein sequence |
