Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77928.t1 | XP_003599258.1 | 95.2 | 105 | 5 | 0 | 1 | 105 | 1 | 105 | 3.20E-46 | 194.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77928.t1 | P31336 | 50.9 | 106 | 48 | 3 | 1 | 104 | 1 | 104 | 8.6e-16 | 84.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77928.t1 | G7IWU6 | 95.2 | 105 | 5 | 0 | 1 | 105 | 1 | 105 | 2.3e-46 | 194.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene77928 | 0.805204 | 1.49E-49 | -1.69E-46 |
| MS.gene049173 | MS.gene77928 | 0.834093 | 3.66E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene77928 | 0.83838 | 2.98E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene77928 | 0.826229 | 3.04E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene77928 | 0.862939 | 3.55E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene77928 | 0.871109 | 8.78E-67 | -1.69E-46 |
| MS.gene049369 | MS.gene77928 | 0.814762 | 1.31E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene77928 | 0.822881 | 1.87E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene77928 | 0.824376 | 8.35E-54 | -1.69E-46 |
| MS.gene049614 | MS.gene77928 | 0.823924 | 1.07E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene77928 | 0.80546 | 1.32E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene77928 | 0.843249 | 1.57E-58 | -1.69E-46 |
| MS.gene049828 | MS.gene77928 | 0.820831 | 5.57E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene77928 | 0.860646 | 1.79E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene77928 | 0.867054 | 1.82E-65 | -1.69E-46 |
| MS.gene050165 | MS.gene77928 | 0.858744 | 6.68E-63 | -1.69E-46 |
| MS.gene050333 | MS.gene77928 | 0.862235 | 5.85E-64 | -1.69E-46 |
| MS.gene050432 | MS.gene77928 | 0.872376 | 3.34E-67 | -1.69E-46 |
| MS.gene050444 | MS.gene77928 | 0.826528 | 2.58E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene77928 | 0.810087 | 1.37E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene77928 | 0.824997 | 5.96E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene77928 | 0.812644 | 3.82E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene77928 | 0.847298 | 1.26E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene77928 | 0.831875 | 1.30E-55 | -1.69E-46 |
| MS.gene050686 | MS.gene77928 | 0.814054 | 1.87E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene77928 | 0.838113 | 3.49E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene77928 | 0.904096 | 1.75E-79 | -1.69E-46 |
| MS.gene050770 | MS.gene77928 | 0.906104 | 2.12E-80 | -1.69E-46 |
| MS.gene050772 | MS.gene77928 | 0.863464 | 2.44E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene77928 | 0.830716 | 2.51E-55 | -1.69E-46 |
| MS.gene05100 | MS.gene77928 | 0.845089 | 5.05E-59 | -1.69E-46 |
| MS.gene05101 | MS.gene77928 | 0.815696 | 8.10E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene77928 | 0.801462 | 8.90E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene77928 | 0.917141 | 7.62E-86 | -1.69E-46 |
| MS.gene051551 | MS.gene77928 | 0.808916 | 2.45E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene77928 | 0.825535 | 4.45E-54 | -1.69E-46 |
| MS.gene051692 | MS.gene77928 | 0.840474 | 8.51E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene77928 | 0.890679 | 7.92E-74 | -1.69E-46 |
| MS.gene051858 | MS.gene77928 | 0.819827 | 9.47E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene77928 | 0.849799 | 2.56E-60 | -1.69E-46 |
| MS.gene052078 | MS.gene77928 | 0.807285 | 5.45E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene77928 | 0.901575 | 2.33E-78 | -1.69E-46 |
| MS.gene052290 | MS.gene77928 | 0.890257 | 1.16E-73 | -1.69E-46 |
| MS.gene052310 | MS.gene77928 | 0.801879 | 7.31E-49 | -1.69E-46 |
| MS.gene052322 | MS.gene77928 | 0.800992 | 1.11E-48 | -1.69E-46 |
| MS.gene052326 | MS.gene77928 | 0.809571 | 1.77E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene77928 | 0.868949 | 4.46E-66 | -1.69E-46 |
| MS.gene052484 | MS.gene77928 | 0.830346 | 3.09E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene77928 | 0.806605 | 7.59E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene77928 | 0.809173 | 2.16E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene77928 | 0.858149 | 1.00E-62 | -1.69E-46 |
| MS.gene053103 | MS.gene77928 | 0.856612 | 2.86E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene77928 | 0.880903 | 3.74E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene77928 | 0.85179 | 7.06E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene77928 | 0.837403 | 5.31E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene77928 | 0.863887 | 1.81E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene77928 | 0.857601 | 1.46E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene77928 | 0.885822 | 5.84E-72 | -1.69E-46 |
| MS.gene053384 | MS.gene77928 | 0.850714 | 1.42E-60 | -1.69E-46 |
| MS.gene053449 | MS.gene77928 | 0.821628 | 3.65E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene77928 | 0.85615 | 3.91E-62 | -1.69E-46 |
| MS.gene053813 | MS.gene77928 | 0.811277 | 7.59E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene77928 | 0.848733 | 5.08E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene77928 | 0.895952 | 5.87E-76 | -1.69E-46 |
| MS.gene054543 | MS.gene77928 | 0.815436 | 9.25E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene77928 | 0.86506 | 7.76E-65 | -1.69E-46 |
| MS.gene054642 | MS.gene77928 | 0.891964 | 2.46E-74 | -1.69E-46 |
| MS.gene054802 | MS.gene77928 | 0.866754 | 2.26E-65 | -1.69E-46 |
| MS.gene054803 | MS.gene77928 | 0.865549 | 5.45E-65 | -1.69E-46 |
| MS.gene054804 | MS.gene77928 | 0.871998 | 4.46E-67 | -1.69E-46 |
| MS.gene054954 | MS.gene77928 | 0.820675 | 6.05E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene77928 | 0.827529 | 1.49E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene77928 | 0.831582 | 1.54E-55 | -1.69E-46 |
| MS.gene055212 | MS.gene77928 | 0.848304 | 6.68E-60 | -1.69E-46 |
| MS.gene055254 | MS.gene77928 | 0.909616 | 4.68E-82 | -1.69E-46 |
| MS.gene055277 | MS.gene77928 | 0.815813 | 7.63E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene77928 | 0.804503 | 2.09E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene77928 | 0.868285 | 7.31E-66 | -1.69E-46 |
| MS.gene055397 | MS.gene77928 | 0.900888 | 4.66E-78 | -1.69E-46 |
| MS.gene055497 | MS.gene77928 | -0.824596 | 7.41E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene77928 | 0.896137 | 4.92E-76 | -1.69E-46 |
| MS.gene055502 | MS.gene77928 | 0.818238 | 2.18E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene77928 | 0.872324 | 3.47E-67 | -1.69E-46 |
| MS.gene055638 | MS.gene77928 | 0.864021 | 1.64E-64 | -1.69E-46 |
| MS.gene055647 | MS.gene77928 | 0.86549 | 5.69E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene77928 | 0.847528 | 1.09E-59 | -1.69E-46 |
| MS.gene055896 | MS.gene77928 | 0.8194 | 1.18E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene77928 | 0.918209 | 2.07E-86 | -1.69E-46 |
| MS.gene055941 | MS.gene77928 | 0.820656 | 6.11E-53 | -1.69E-46 |
| MS.gene055956 | MS.gene77928 | -0.839585 | 1.45E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene77928 | 0.818151 | 2.28E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene77928 | 0.884498 | 1.82E-71 | -1.69E-46 |
| MS.gene056410 | MS.gene77928 | 0.821119 | 4.78E-53 | -1.69E-46 |
| MS.gene056487 | MS.gene77928 | 0.803645 | 3.16E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene77928 | 0.863025 | 3.34E-64 | -1.69E-46 |
| MS.gene056657 | MS.gene77928 | 0.87692 | 9.51E-69 | -1.69E-46 |
| MS.gene056897 | MS.gene77928 | 0.813594 | 2.37E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene77928 | 0.807222 | 5.62E-50 | -1.69E-46 |
| MS.gene057123 | MS.gene77928 | 0.81689 | 4.38E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene77928 | 0.917921 | 2.94E-86 | -1.69E-46 |
| MS.gene057146 | MS.gene77928 | 0.802338 | 5.88E-49 | -1.69E-46 |
| MS.gene057246 | MS.gene77928 | 0.85751 | 1.55E-62 | -1.69E-46 |
| MS.gene057295 | MS.gene77928 | 0.861787 | 8.02E-64 | -1.69E-46 |
| MS.gene057331 | MS.gene77928 | 0.867893 | 9.78E-66 | -1.69E-46 |
| MS.gene05735 | MS.gene77928 | 0.828474 | 8.81E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene77928 | 0.877727 | 4.98E-69 | -1.69E-46 |
| MS.gene057926 | MS.gene77928 | 0.856147 | 3.92E-62 | -1.69E-46 |
| MS.gene058006 | MS.gene77928 | 0.840041 | 1.10E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene77928 | 0.850299 | 1.86E-60 | -1.69E-46 |
| MS.gene058293 | MS.gene77928 | 0.841645 | 4.19E-58 | -1.69E-46 |
| MS.gene058323 | MS.gene77928 | 0.83552 | 1.60E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene77928 | 0.869426 | 3.12E-66 | -1.69E-46 |
| MS.gene058660 | MS.gene77928 | 0.817097 | 3.93E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene77928 | 0.871887 | 4.85E-67 | -1.69E-46 |
| MS.gene058773 | MS.gene77928 | 0.846797 | 1.73E-59 | -1.69E-46 |
| MS.gene058903 | MS.gene77928 | 0.828295 | 9.73E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene77928 | 0.843549 | 1.31E-58 | -1.69E-46 |
| MS.gene059029 | MS.gene77928 | 0.861475 | 1.00E-63 | -1.69E-46 |
| MS.gene05913 | MS.gene77928 | 0.818519 | 1.88E-52 | -1.69E-46 |
| MS.gene059326 | MS.gene77928 | 0.812158 | 4.88E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene77928 | 0.80512 | 1.56E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene77928 | 0.836436 | 9.37E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene77928 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene77928 | 0.863713 | 2.05E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene77928 | 0.81055 | 1.09E-50 | -1.69E-46 |
| MS.gene059692 | MS.gene77928 | 0.82784 | 1.25E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene77928 | 0.825959 | 3.53E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene77928 | 0.813643 | 2.31E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene77928 | 0.835314 | 1.80E-56 | -1.69E-46 |
| MS.gene059858 | MS.gene77928 | 0.840679 | 7.52E-58 | -1.69E-46 |
| MS.gene059902 | MS.gene77928 | 0.818225 | 2.19E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene77928 | 0.888645 | 4.91E-73 | -1.69E-46 |
| MS.gene060193 | MS.gene77928 | 0.845168 | 4.80E-59 | -1.69E-46 |
| MS.gene060341 | MS.gene77928 | 0.815496 | 8.97E-52 | -1.69E-46 |
| MS.gene060727 | MS.gene77928 | 0.813628 | 2.32E-51 | -1.69E-46 |
| MS.gene060728 | MS.gene77928 | 0.826218 | 3.06E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene77928 | 0.80657 | 7.71E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene77928 | 0.871977 | 4.53E-67 | -1.69E-46 |
| MS.gene060818 | MS.gene77928 | 0.865984 | 3.97E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene77928 | 0.809335 | 1.99E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene77928 | 0.860264 | 2.33E-63 | -1.69E-46 |
| MS.gene061051 | MS.gene77928 | -0.81256 | 3.99E-51 | -1.69E-46 |
| MS.gene061134 | MS.gene77928 | 0.812961 | 3.26E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene77928 | 0.836571 | 8.66E-57 | -1.69E-46 |
| MS.gene061200 | MS.gene77928 | 0.896823 | 2.55E-76 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77928.t1 | MTR_3g030860 | 95.238 | 105 | 5 | 0 | 1 | 105 | 1 | 105 | 1.62e-58 | 175 |
| MS.gene77928.t1 | MTR_3g030850 | 81.905 | 105 | 18 | 1 | 1 | 104 | 1 | 105 | 2.82e-52 | 159 |
| MS.gene77928.t1 | MTR_4g037505 | 66.667 | 108 | 33 | 3 | 1 | 105 | 1 | 108 | 7.55e-39 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77928.t1 | AT1G51400 | 56.075 | 107 | 42 | 3 | 1 | 104 | 1 | 105 | 2.13e-28 | 99.4 |
| MS.gene77928.t1 | AT3G21055 | 55.140 | 107 | 42 | 4 | 1 | 105 | 1 | 103 | 2.86e-24 | 89.0 |
| MS.gene77928.t1 | AT3G21055 | 55.140 | 107 | 42 | 4 | 1 | 105 | 41 | 143 | 5.06e-24 | 89.4 |
Find 32 sgRNAs with CRISPR-Local
Find 36 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCTGTTTGCTCTGTTGC+TGG | 0.185357 | 3.2:-21581118 | MS.gene77928:CDS |
| GCCTCTGGGGTGCCTCTTCT+TGG | 0.187436 | 3.2:+21581073 | None:intergenic |
| CTGCTGTTTGCTCTGTTGCT+GGG | 0.300217 | 3.2:-21581117 | MS.gene77928:CDS |
| ATTGCTACCCTCCTTGTCAT+TGG | 0.354454 | 3.2:+21581174 | None:intergenic |
| GTTGGGTTAGTGACACAAAC+AGG | 0.359822 | 3.2:+21581034 | None:intergenic |
| CTCTGTTGCTGGGGTTGCAA+TGG | 0.391387 | 3.2:-21581107 | MS.gene77928:CDS |
| AACCGATGATCGGTTGGTTA+CGG | 0.418255 | 3.2:+21581264 | None:intergenic |
| GATGATCGGTTGGTTACGGC+TGG | 0.474152 | 3.2:+21581268 | None:intergenic |
| GCTAGGATTTGTCGCTATTG+AGG | 0.474783 | 3.2:-21581010 | None:intergenic |
| TGCTGTTTGCTCTGTTGCTG+GGG | 0.508878 | 3.2:-21581116 | MS.gene77928:CDS |
| TAGCGACAAATCCTAGCAGT+TGG | 0.523285 | 3.2:+21581016 | None:intergenic |
| GCTGCGTTGCAACCGATGAT+CGG | 0.526416 | 3.2:+21581254 | None:intergenic |
| AGCGACAAATCCTAGCAGTT+GGG | 0.546386 | 3.2:+21581017 | None:intergenic |
| CGTTGCAACCGATGATCGGT+TGG | 0.553263 | 3.2:+21581258 | None:intergenic |
| AGTGCTGTAAGAGCAGTTGA+AGG | 0.554404 | 3.2:-21581217 | MS.gene77928:CDS |
| AATCACTATGACATCCTCAA+TGG | 0.558898 | 3.2:-21581299 | MS.gene77928:CDS |
| ACTATGACATCCTCAATGGT+TGG | 0.565016 | 3.2:-21581295 | MS.gene77928:CDS |
| GTGTCACTAACCCAACTGCT+AGG | 0.567214 | 3.2:-21581027 | MS.gene77928:CDS |
| AATGACAAGGAGGGTAGCAA+TGG | 0.572603 | 3.2:-21581172 | MS.gene77928:CDS |
| GTGCTGTAAGAGCAGTTGAA+GGG | 0.585017 | 3.2:-21581216 | MS.gene77928:CDS |
| AGCCGTAACCAACCGATCAT+CGG | 0.587544 | 3.2:-21581266 | MS.gene77928:CDS |
| ACAAGGAGGGTAGCAATGGA+AGG | 0.594273 | 3.2:-21581168 | MS.gene77928:CDS |
| TGCTGTAAGAGCAGTTGAAG+GGG | 0.596756 | 3.2:-21581215 | MS.gene77928:CDS |
| ATGATCGGTTGGTTACGGCT+GGG | 0.625964 | 3.2:+21581269 | None:intergenic |
| GGCTGGGAAACCAACCATTG+AGG | 0.639229 | 3.2:+21581285 | None:intergenic |
| GCAGATGATGAACCAAGAAG+AGG | 0.660121 | 3.2:-21581085 | MS.gene77928:CDS |
| GATCATCGGTTGCAACGCAG+CGG | 0.682918 | 3.2:-21581252 | MS.gene77928:CDS |
| AGTTGTACCAATGACAAGGA+GGG | 0.684053 | 3.2:-21581181 | MS.gene77928:CDS |
| CAGTTGTACCAATGACAAGG+AGG | 0.687873 | 3.2:-21581182 | MS.gene77928:CDS |
| TTGGGTTAGTGACACAAACA+GGG | 0.691418 | 3.2:+21581035 | None:intergenic |
| ACCAAGAAGAGGCACCCCAG+AGG | 0.700077 | 3.2:-21581074 | MS.gene77928:CDS |
| GATCAGTTGTACCAATGACA+AGG | 0.701301 | 3.2:-21581185 | MS.gene77928:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AATCACTATGACATCCTCAA+TGG | - | chr3.2:21581020-21581039 | MS.gene77928:CDS | 35.0% | |
| ACTATGACATCCTCAATGGT+TGG | - | chr3.2:21581024-21581043 | MS.gene77928:CDS | 40.0% | |
| AGTTGTACCAATGACAAGGA+GGG | - | chr3.2:21581138-21581157 | MS.gene77928:CDS | 40.0% | |
| GATCAGTTGTACCAATGACA+AGG | - | chr3.2:21581134-21581153 | MS.gene77928:CDS | 40.0% | |
| !! | TTGGGTTAGTGACACAAACA+GGG | + | chr3.2:21581287-21581306 | None:intergenic | 40.0% |
| !!! | AACAGGGCCATACTTTTTCT+TGG | + | chr3.2:21581271-21581290 | None:intergenic | 40.0% |
| !!! | ATACTTTTTCTTGGCCTCTG+GGG | + | chr3.2:21581262-21581281 | None:intergenic | 40.0% |
| !!! | CATACTTTTTCTTGGCCTCT+GGG | + | chr3.2:21581263-21581282 | None:intergenic | 40.0% |
| AATGACAAGGAGGGTAGCAA+TGG | - | chr3.2:21581147-21581166 | MS.gene77928:CDS | 45.0% | |
| AGCGACAAATCCTAGCAGTT+GGG | + | chr3.2:21581305-21581324 | None:intergenic | 45.0% | |
| AGTGCTGTAAGAGCAGTTGA+AGG | - | chr3.2:21581102-21581121 | MS.gene77928:CDS | 45.0% | |
| ATTGCTACCCTCCTTGTCAT+TGG | + | chr3.2:21581148-21581167 | None:intergenic | 45.0% | |
| CAGTTGTACCAATGACAAGG+AGG | - | chr3.2:21581137-21581156 | MS.gene77928:CDS | 45.0% | |
| CCAGAGGCCAAGAAAAAGTA+TGG | - | chr3.2:21581261-21581280 | MS.gene77928:CDS | 45.0% | |
| GCAGATGATGAACCAAGAAG+AGG | - | chr3.2:21581234-21581253 | MS.gene77928:CDS | 45.0% | |
| GTGCTGTAAGAGCAGTTGAA+GGG | - | chr3.2:21581103-21581122 | MS.gene77928:CDS | 45.0% | |
| TAGCGACAAATCCTAGCAGT+TGG | + | chr3.2:21581306-21581325 | None:intergenic | 45.0% | |
| TGCTGTAAGAGCAGTTGAAG+GGG | - | chr3.2:21581104-21581123 | MS.gene77928:CDS | 45.0% | |
| ! | AACCGATGATCGGTTGGTTA+CGG | + | chr3.2:21581058-21581077 | None:intergenic | 45.0% |
| !! | GTTGGGTTAGTGACACAAAC+AGG | + | chr3.2:21581288-21581307 | None:intergenic | 45.0% |
| !!! | CCATACTTTTTCTTGGCCTC+TGG | + | chr3.2:21581264-21581283 | None:intergenic | 45.0% |
| ACAAGGAGGGTAGCAATGGA+AGG | - | chr3.2:21581151-21581170 | MS.gene77928:CDS | 50.0% | |
| AGCCGTAACCAACCGATCAT+CGG | - | chr3.2:21581053-21581072 | MS.gene77928:CDS | 50.0% | |
| ! | ATGATCGGTTGGTTACGGCT+GGG | + | chr3.2:21581053-21581072 | None:intergenic | 50.0% |
| ! | CTGCTGTTTGCTCTGTTGCT+GGG | - | chr3.2:21581202-21581221 | MS.gene77928:CDS | 50.0% |
| ! | GTGTCACTAACCCAACTGCT+AGG | - | chr3.2:21581292-21581311 | MS.gene77928:CDS | 50.0% |
| ! | TGCTGTTTGCTCTGTTGCTG+GGG | - | chr3.2:21581203-21581222 | MS.gene77928:CDS | 50.0% |
| CGTTGCAACCGATGATCGGT+TGG | + | chr3.2:21581064-21581083 | None:intergenic | 55.0% | |
| CTCTGTTGCTGGGGTTGCAA+TGG | - | chr3.2:21581212-21581231 | MS.gene77928:CDS | 55.0% | |
| GCTGCGTTGCAACCGATGAT+CGG | + | chr3.2:21581068-21581087 | None:intergenic | 55.0% | |
| GGCTGGGAAACCAACCATTG+AGG | + | chr3.2:21581037-21581056 | None:intergenic | 55.0% | |
| ! | GATCATCGGTTGCAACGCAG+CGG | - | chr3.2:21581067-21581086 | MS.gene77928:CDS | 55.0% |
| ! | GATGATCGGTTGGTTACGGC+TGG | + | chr3.2:21581054-21581073 | None:intergenic | 55.0% |
| ! | GCTGCTGTTTGCTCTGTTGC+TGG | - | chr3.2:21581201-21581220 | MS.gene77928:CDS | 55.0% |
| !! | ACCAAGAAGAGGCACCCCAG+AGG | - | chr3.2:21581245-21581264 | MS.gene77928:CDS | 60.0% |
| !! | GCCTCTGGGGTGCCTCTTCT+TGG | + | chr3.2:21581249-21581268 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 21581012 | 21581329 | 21581012 | ID=MS.gene77928 |
| chr3.2 | mRNA | 21581012 | 21581329 | 21581012 | ID=MS.gene77928.t1;Parent=MS.gene77928 |
| chr3.2 | exon | 21581012 | 21581329 | 21581012 | ID=MS.gene77928.t1.exon1;Parent=MS.gene77928.t1 |
| chr3.2 | CDS | 21581012 | 21581329 | 21581012 | ID=cds.MS.gene77928.t1;Parent=MS.gene77928.t1 |
| Gene Sequence |
| Protein sequence |
