Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90011.t1 | XP_024630289.1 | 96.2 | 422 | 16 | 0 | 98 | 519 | 86 | 507 | 6.80E-214 | 753.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90011.t1 | Q52MZ2 | 71.0 | 427 | 111 | 7 | 98 | 519 | 88 | 506 | 3.3e-161 | 569.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90011.t1 | A0A396JP80 | 96.2 | 422 | 16 | 0 | 98 | 519 | 86 | 507 | 4.9e-214 | 753.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene90011.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene90011 | -0.829879 | 4.02E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene90011 | -0.834963 | 2.21E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene90011 | -0.834995 | 2.17E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene90011 | -0.816203 | 6.24E-52 | -1.69E-46 |
| MS.gene049259 | MS.gene90011 | 0.865094 | 7.58E-65 | -1.69E-46 |
| MS.gene049285 | MS.gene90011 | -0.819068 | 1.41E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene90011 | -0.842495 | 2.50E-58 | -1.69E-46 |
| MS.gene049549 | MS.gene90011 | 0.816666 | 4.92E-52 | -1.69E-46 |
| MS.gene049611 | MS.gene90011 | 0.832229 | 1.06E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene90011 | -0.827366 | 1.63E-54 | -1.69E-46 |
| MS.gene049634 | MS.gene90011 | 0.870003 | 2.03E-66 | -1.69E-46 |
| MS.gene04986 | MS.gene90011 | 0.809553 | 1.79E-50 | -1.69E-46 |
| MS.gene050082 | MS.gene90011 | 0.802482 | 5.49E-49 | -1.69E-46 |
| MS.gene050083 | MS.gene90011 | 0.805784 | 1.13E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene90011 | -0.802786 | 4.76E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene90011 | -0.828655 | 7.97E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene90011 | -0.840445 | 8.66E-58 | -1.69E-46 |
| MS.gene050173 | MS.gene90011 | 0.819246 | 1.28E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene90011 | -0.821992 | 3.01E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene90011 | -0.818881 | 1.56E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene90011 | -0.840394 | 8.93E-58 | -1.69E-46 |
| MS.gene050381 | MS.gene90011 | 0.853135 | 2.92E-61 | -1.69E-46 |
| MS.gene050444 | MS.gene90011 | -0.80861 | 2.85E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene90011 | -0.803211 | 3.89E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene90011 | -0.851668 | 7.64E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene90011 | -0.816105 | 6.56E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene90011 | -0.85894 | 5.83E-63 | -1.69E-46 |
| MS.gene050647 | MS.gene90011 | 0.816723 | 4.77E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene90011 | -0.835955 | 1.24E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene90011 | -0.80427 | 2.34E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene90011 | -0.816333 | 5.84E-52 | -1.69E-46 |
| MS.gene05079 | MS.gene90011 | 0.849126 | 3.95E-60 | -1.69E-46 |
| MS.gene050809 | MS.gene90011 | 0.816768 | 4.66E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene90011 | -0.823893 | 1.08E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene90011 | -0.837669 | 4.53E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene90011 | -0.835531 | 1.59E-56 | -1.69E-46 |
| MS.gene050883 | MS.gene90011 | 0.805959 | 1.04E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene90011 | -0.812559 | 3.99E-51 | -1.69E-46 |
| MS.gene051044 | MS.gene90011 | 0.840708 | 7.39E-58 | -1.69E-46 |
| MS.gene05104 | MS.gene90011 | 0.832536 | 8.94E-56 | -1.69E-46 |
| MS.gene051127 | MS.gene90011 | 0.872317 | 3.49E-67 | -1.69E-46 |
| MS.gene051138 | MS.gene90011 | 0.848566 | 5.65E-60 | -1.69E-46 |
| MS.gene05114 | MS.gene90011 | 0.835775 | 1.38E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene90011 | -0.816488 | 5.39E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene90011 | -0.801355 | 9.36E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene90011 | 0.815786 | 7.73E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene90011 | 0.832251 | 1.05E-55 | -1.69E-46 |
| MS.gene051367 | MS.gene90011 | 0.806334 | 8.65E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene90011 | 0.834837 | 2.38E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene90011 | -0.819658 | 1.03E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene90011 | -0.806549 | 7.79E-50 | -1.69E-46 |
| MS.gene051863 | MS.gene90011 | 0.818549 | 1.85E-52 | -1.69E-46 |
| MS.gene051874 | MS.gene90011 | -0.809408 | 1.92E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene90011 | -0.817226 | 3.68E-52 | -1.69E-46 |
| MS.gene052211 | MS.gene90011 | 0.807826 | 4.18E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene90011 | -0.813154 | 2.96E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene90011 | -0.821456 | 4.00E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene90011 | -0.840388 | 8.96E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene90011 | -0.803536 | 3.33E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene90011 | 0.871999 | 4.45E-67 | -1.69E-46 |
| MS.gene053488 | MS.gene90011 | 0.828951 | 6.76E-55 | -1.69E-46 |
| MS.gene053561 | MS.gene90011 | 0.860878 | 1.52E-63 | -1.69E-46 |
| MS.gene053824 | MS.gene90011 | -0.806308 | 8.76E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene90011 | 0.806042 | 9.97E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene90011 | -0.816085 | 6.63E-52 | -1.69E-46 |
| MS.gene054056 | MS.gene90011 | 0.80634 | 8.63E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene90011 | -0.805204 | 1.49E-49 | -1.69E-46 |
| MS.gene054616 | MS.gene90011 | 0.816069 | 6.69E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene90011 | -0.839399 | 1.62E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene90011 | 0.838536 | 2.71E-57 | -1.69E-46 |
| MS.gene054707 | MS.gene90011 | 0.81814 | 2.29E-52 | -1.69E-46 |
| MS.gene054708 | MS.gene90011 | 0.824711 | 6.96E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene90011 | -0.819207 | 1.31E-52 | -1.69E-46 |
| MS.gene055124 | MS.gene90011 | 0.831084 | 2.04E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene90011 | 0.85367 | 2.05E-61 | -1.69E-46 |
| MS.gene055202 | MS.gene90011 | 0.845138 | 4.90E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene90011 | -0.836196 | 1.08E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene90011 | -0.844223 | 8.64E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene90011 | -0.846152 | 2.60E-59 | -1.69E-46 |
| MS.gene055638 | MS.gene90011 | -0.811684 | 6.19E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene90011 | -0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene90011 | -0.820638 | 6.17E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene90011 | -0.832342 | 9.99E-56 | -1.69E-46 |
| MS.gene055776 | MS.gene90011 | -0.809994 | 1.44E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene90011 | -0.839358 | 1.66E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene90011 | -0.802261 | 6.10E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene90011 | 0.84138 | 4.92E-58 | -1.69E-46 |
| MS.gene056224 | MS.gene90011 | 0.846767 | 1.77E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene90011 | -0.853244 | 2.72E-61 | -1.69E-46 |
| MS.gene056510 | MS.gene90011 | -0.804702 | 1.90E-49 | -1.69E-46 |
| MS.gene056549 | MS.gene90011 | -0.806104 | 9.67E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene90011 | 0.804855 | 1.77E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene90011 | 0.80319 | 3.92E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene90011 | -0.838454 | 2.85E-57 | -1.69E-46 |
| MS.gene056692 | MS.gene90011 | -0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene90011 | 0.835818 | 1.34E-56 | -1.69E-46 |
| MS.gene056857 | MS.gene90011 | 0.860176 | 2.48E-63 | -1.69E-46 |
| MS.gene057473 | MS.gene90011 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene057549 | MS.gene90011 | 0.801088 | 1.06E-48 | -1.69E-46 |
| MS.gene057768 | MS.gene90011 | 0.823352 | 1.45E-53 | -1.69E-46 |
| MS.gene058068 | MS.gene90011 | 0.828311 | 9.65E-55 | -1.69E-46 |
| MS.gene058093 | MS.gene90011 | 0.80091 | 1.15E-48 | -1.69E-46 |
| MS.gene058099 | MS.gene90011 | 0.826484 | 2.64E-54 | -1.69E-46 |
| MS.gene058109 | MS.gene90011 | 0.822149 | 2.76E-53 | -1.69E-46 |
| MS.gene058111 | MS.gene90011 | 0.829495 | 4.99E-55 | -1.69E-46 |
| MS.gene058117 | MS.gene90011 | 0.827624 | 1.41E-54 | -1.69E-46 |
| MS.gene058171 | MS.gene90011 | 0.86399 | 1.68E-64 | -1.69E-46 |
| MS.gene058173 | MS.gene90011 | 0.849631 | 2.86E-60 | -1.69E-46 |
| MS.gene058175 | MS.gene90011 | 0.866597 | 2.54E-65 | -1.69E-46 |
| MS.gene058268 | MS.gene90011 | 0.810786 | 9.69E-51 | -1.69E-46 |
| MS.gene058269 | MS.gene90011 | 0.809083 | 2.25E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene90011 | 0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene90011 | -0.807991 | 3.86E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene90011 | -0.832351 | 9.93E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene90011 | -0.827418 | 1.58E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene90011 | 0.829827 | 4.14E-55 | -1.69E-46 |
| MS.gene058723 | MS.gene90011 | -0.812457 | 4.20E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene90011 | -0.84206 | 3.26E-58 | -1.69E-46 |
| MS.gene058840 | MS.gene90011 | 0.836679 | 8.12E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene90011 | -0.849882 | 2.43E-60 | -1.69E-46 |
| MS.gene059023 | MS.gene90011 | -0.817598 | 3.03E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene90011 | 0.809415 | 1.91E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene90011 | -0.830565 | 2.73E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene90011 | -0.803756 | 2.99E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene90011 | -0.828395 | 9.21E-55 | -1.69E-46 |
| MS.gene059690 | MS.gene90011 | 0.818924 | 1.52E-52 | -1.69E-46 |
| MS.gene059694 | MS.gene90011 | 0.8145 | 1.49E-51 | -1.69E-46 |
| MS.gene059697 | MS.gene90011 | 0.808608 | 2.85E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene90011 | -0.821855 | 3.23E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene90011 | -0.852477 | 4.50E-61 | -1.69E-46 |
| MS.gene059902 | MS.gene90011 | -0.807508 | 4.88E-50 | -1.69E-46 |
| MS.gene059916 | MS.gene90011 | 0.816308 | 5.91E-52 | -1.69E-46 |
| MS.gene060405 | MS.gene90011 | 0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene90011 | -0.803639 | 3.17E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene90011 | 0.804993 | 1.65E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene90011 | -0.832702 | 8.13E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene90011 | -0.851856 | 6.76E-61 | -1.69E-46 |
| MS.gene060778 | MS.gene90011 | -0.804466 | 2.13E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene90011 | -0.824838 | 6.50E-54 | -1.69E-46 |
| MS.gene060823 | MS.gene90011 | 0.839318 | 1.70E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene90011 | -0.835267 | 1.85E-56 | -1.69E-46 |
| MS.gene061044 | MS.gene90011 | 0.801137 | 1.04E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90011.t1 | MTR_0126s0080 | 97.594 | 374 | 9 | 0 | 98 | 471 | 86 | 459 | 0.0 | 762 |
| MS.gene90011.t1 | MTR_7g092750 | 75.000 | 428 | 83 | 6 | 94 | 519 | 59 | 464 | 0.0 | 645 |
| MS.gene90011.t1 | MTR_7g092750 | 69.860 | 428 | 79 | 7 | 94 | 519 | 59 | 438 | 0.0 | 587 |
| MS.gene90011.t1 | MTR_7g092750 | 75.597 | 377 | 76 | 3 | 143 | 519 | 3 | 363 | 0.0 | 584 |
| MS.gene90011.t1 | MTR_8g040120 | 60.968 | 310 | 107 | 5 | 212 | 517 | 166 | 465 | 5.82e-129 | 384 |
| MS.gene90011.t1 | MTR_7g089800 | 59.146 | 328 | 118 | 6 | 196 | 518 | 107 | 423 | 2.32e-127 | 378 |
| MS.gene90011.t1 | MTR_7g089800 | 62.013 | 308 | 101 | 6 | 216 | 518 | 156 | 452 | 6.36e-127 | 378 |
| MS.gene90011.t1 | MTR_2g086420 | 45.043 | 464 | 177 | 8 | 99 | 518 | 40 | 469 | 1.81e-122 | 368 |
| MS.gene90011.t1 | MTR_2g086420 | 45.043 | 464 | 176 | 9 | 99 | 518 | 40 | 468 | 7.52e-121 | 364 |
| MS.gene90011.t1 | MTR_4g053250 | 45.067 | 446 | 191 | 8 | 102 | 518 | 41 | 461 | 9.78e-113 | 343 |
| MS.gene90011.t1 | MTR_5g054900 | 54.181 | 299 | 126 | 3 | 223 | 518 | 63 | 353 | 3.39e-112 | 337 |
| MS.gene90011.t1 | MTR_5g054900 | 54.181 | 299 | 126 | 3 | 223 | 518 | 144 | 434 | 3.14e-111 | 337 |
| MS.gene90011.t1 | MTR_5g054900 | 53.512 | 299 | 124 | 4 | 223 | 518 | 63 | 349 | 9.12e-109 | 328 |
| MS.gene90011.t1 | MTR_5g054900 | 53.512 | 299 | 124 | 4 | 223 | 518 | 174 | 460 | 3.52e-107 | 328 |
| MS.gene90011.t1 | MTR_3g087940 | 51.792 | 307 | 139 | 3 | 212 | 518 | 64 | 361 | 1.48e-102 | 312 |
| MS.gene90011.t1 | MTR_1g111310 | 51.014 | 296 | 141 | 3 | 223 | 518 | 416 | 707 | 3.26e-97 | 309 |
| MS.gene90011.t1 | MTR_1g111310 | 50.000 | 290 | 133 | 3 | 223 | 512 | 49 | 326 | 4.29e-88 | 285 |
| MS.gene90011.t1 | MTR_5g060950 | 47.508 | 301 | 150 | 2 | 215 | 515 | 54 | 346 | 2.85e-86 | 270 |
| MS.gene90011.t1 | MTR_8g091650 | 42.899 | 345 | 176 | 6 | 174 | 518 | 33 | 356 | 5.40e-84 | 265 |
| MS.gene90011.t1 | MTR_3g073560 | 48.789 | 289 | 140 | 2 | 228 | 516 | 65 | 345 | 1.15e-82 | 268 |
| MS.gene90011.t1 | MTR_8g091650 | 47.569 | 288 | 142 | 4 | 231 | 518 | 5 | 283 | 1.51e-82 | 258 |
| MS.gene90011.t1 | MTR_8g091650 | 47.423 | 291 | 144 | 4 | 228 | 518 | 111 | 392 | 3.68e-81 | 258 |
| MS.gene90011.t1 | MTR_3g044820 | 52.047 | 171 | 75 | 3 | 223 | 388 | 40 | 208 | 1.47e-55 | 185 |
| MS.gene90011.t1 | MTR_1g090370 | 31.373 | 204 | 113 | 5 | 313 | 511 | 47 | 228 | 8.59e-21 | 91.7 |
| MS.gene90011.t1 | MTR_1g111320 | 56.962 | 79 | 32 | 1 | 223 | 301 | 141 | 217 | 9.56e-18 | 82.8 |
| MS.gene90011.t1 | MTR_2g076140 | 24.413 | 213 | 123 | 3 | 308 | 500 | 8 | 202 | 2.84e-12 | 66.6 |
| MS.gene90011.t1 | MTR_7g068860 | 25.731 | 171 | 123 | 2 | 342 | 508 | 49 | 219 | 6.77e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90011.t1 | AT5G06839 | 63.431 | 443 | 140 | 10 | 94 | 519 | 22 | 459 | 0.0 | 542 |
| MS.gene90011.t1 | AT5G06839 | 60.820 | 439 | 115 | 8 | 94 | 519 | 22 | 416 | 0.0 | 514 |
| MS.gene90011.t1 | AT5G06839 | 60.682 | 440 | 115 | 9 | 94 | 519 | 22 | 417 | 2.60e-179 | 510 |
| MS.gene90011.t1 | AT1G08320 | 59.688 | 320 | 106 | 5 | 199 | 518 | 33 | 329 | 3.08e-127 | 375 |
| MS.gene90011.t1 | AT1G08320 | 59.688 | 320 | 106 | 5 | 199 | 518 | 33 | 329 | 3.08e-127 | 375 |
| MS.gene90011.t1 | AT1G08320 | 49.217 | 447 | 171 | 12 | 98 | 518 | 37 | 453 | 1.98e-126 | 378 |
| MS.gene90011.t1 | AT1G08320 | 49.217 | 447 | 171 | 12 | 98 | 518 | 37 | 453 | 1.98e-126 | 378 |
| MS.gene90011.t1 | AT1G08320 | 49.217 | 447 | 171 | 12 | 98 | 518 | 37 | 453 | 1.98e-126 | 378 |
| MS.gene90011.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 209 | 518 | 29 | 330 | 7.83e-118 | 350 |
| MS.gene90011.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 209 | 518 | 29 | 330 | 7.83e-118 | 350 |
| MS.gene90011.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 209 | 518 | 29 | 330 | 7.83e-118 | 350 |
| MS.gene90011.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 209 | 518 | 29 | 330 | 7.83e-118 | 350 |
| MS.gene90011.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 209 | 518 | 29 | 330 | 7.83e-118 | 350 |
| MS.gene90011.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 212 | 518 | 30 | 330 | 2.80e-116 | 347 |
| MS.gene90011.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 212 | 518 | 30 | 330 | 2.80e-116 | 347 |
| MS.gene90011.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 212 | 518 | 30 | 330 | 2.80e-116 | 347 |
| MS.gene90011.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 212 | 518 | 30 | 330 | 2.80e-116 | 347 |
| MS.gene90011.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 212 | 518 | 3 | 303 | 5.17e-116 | 345 |
| MS.gene90011.t1 | AT5G06960 | 59.797 | 296 | 107 | 4 | 226 | 518 | 44 | 330 | 1.02e-115 | 345 |
| MS.gene90011.t1 | AT5G06960 | 59.797 | 296 | 107 | 4 | 226 | 518 | 44 | 330 | 1.02e-115 | 345 |
| MS.gene90011.t1 | AT5G06960 | 59.797 | 296 | 107 | 4 | 226 | 518 | 24 | 310 | 1.26e-115 | 344 |
| MS.gene90011.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 212 | 518 | 24 | 324 | 1.37e-115 | 344 |
| MS.gene90011.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 212 | 518 | 55 | 355 | 8.09e-115 | 343 |
| MS.gene90011.t1 | AT1G68640 | 55.882 | 306 | 127 | 3 | 214 | 517 | 152 | 451 | 3.55e-111 | 338 |
| MS.gene90011.t1 | AT5G10030 | 52.721 | 294 | 130 | 3 | 225 | 518 | 78 | 362 | 1.34e-101 | 310 |
| MS.gene90011.t1 | AT5G10030 | 52.721 | 294 | 130 | 3 | 225 | 518 | 78 | 362 | 1.34e-101 | 310 |
| MS.gene90011.t1 | AT5G10030 | 52.721 | 294 | 130 | 3 | 225 | 518 | 78 | 362 | 1.34e-101 | 310 |
| MS.gene90011.t1 | AT5G10030 | 52.721 | 294 | 130 | 3 | 225 | 518 | 78 | 362 | 1.34e-101 | 310 |
| MS.gene90011.t1 | AT5G10030 | 52.721 | 294 | 130 | 3 | 225 | 518 | 78 | 362 | 1.34e-101 | 310 |
| MS.gene90011.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 151 | 518 | 3 | 366 | 4.44e-99 | 304 |
| MS.gene90011.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 151 | 518 | 3 | 366 | 4.44e-99 | 304 |
| MS.gene90011.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 151 | 518 | 3 | 366 | 4.44e-99 | 304 |
| MS.gene90011.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 151 | 518 | 3 | 366 | 4.44e-99 | 304 |
| MS.gene90011.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 151 | 518 | 3 | 366 | 4.44e-99 | 304 |
| MS.gene90011.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 151 | 518 | 3 | 366 | 4.44e-99 | 304 |
| MS.gene90011.t1 | AT5G65210 | 50.658 | 304 | 136 | 5 | 215 | 518 | 7 | 296 | 1.01e-97 | 298 |
| MS.gene90011.t1 | AT1G77920 | 48.640 | 331 | 140 | 4 | 201 | 518 | 53 | 366 | 1.09e-97 | 300 |
| MS.gene90011.t1 | AT1G22070 | 51.125 | 311 | 146 | 2 | 208 | 518 | 78 | 382 | 4.22e-97 | 299 |
| MS.gene90011.t1 | AT1G58330 | 27.826 | 230 | 139 | 5 | 297 | 508 | 3 | 223 | 8.11e-17 | 80.1 |
Find 128 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACTCGCGCTGCTCTTTC+TGG | 0.078965 | 1.4:-40475107 | None:intergenic |
| GATTCAAGTGCTTATGATTT+AGG | 0.170937 | 1.4:+40477914 | MS.gene90011:CDS |
| CTCTTTCTGGCTTCCTGCTT+GGG | 0.190180 | 1.4:-40475094 | None:intergenic |
| AATGGGTGGAGGTGCACTTT+TGG | 0.270657 | 1.4:+40479869 | MS.gene90011:CDS |
| CTAATGCTATTCATAGAAAT+TGG | 0.272106 | 1.4:-40479909 | None:intergenic |
| GTCGGTCGGATTTGGATAAA+AGG | 0.278860 | 1.4:+40475311 | MS.gene90011:CDS |
| ATTTATACCTTTGAATTAGA+TGG | 0.288466 | 1.4:-40478710 | None:intergenic |
| TGCTTATGATTTAGGTGAAT+TGG | 0.291461 | 1.4:+40477922 | MS.gene90011:CDS |
| GTACCTACCTTGACAGGTTT+TGG | 0.299604 | 1.4:-40479008 | None:intergenic |
| ACCCGCATATACCAAGTATT+TGG | 0.301372 | 1.4:-40481459 | None:intergenic |
| TTTAAGCAATCCTCCTAATA+TGG | 0.308534 | 1.4:+40481573 | MS.gene90011:CDS |
| TACATTGGGTCGGTCGGATT+TGG | 0.312478 | 1.4:+40475303 | MS.gene90011:CDS |
| GCAATGTTTGATGTGGAGTA+TGG | 0.316893 | 1.4:+40480035 | MS.gene90011:CDS |
| CTCATCACTCACACTATTCT+TGG | 0.319137 | 1.4:-40485543 | None:intergenic |
| CAGACCATCTGAACTCATTA+AGG | 0.331549 | 1.4:+40480280 | MS.gene90011:CDS |
| GCTCTTTCTGGCTTCCTGCT+TGG | 0.336638 | 1.4:-40475095 | None:intergenic |
| CCCATGTAGTTAGCCATATT+AGG | 0.347360 | 1.4:-40481586 | None:intergenic |
| GTTATATGTGGAAAATTGTT+TGG | 0.359400 | 1.4:+40480139 | MS.gene90011:CDS |
| CACCACCGTCCTCCTTCCCT+TGG | 0.361571 | 1.4:-40475241 | None:intergenic |
| GTTCTAGTCGTTTGTGTTCG+AGG | 0.378466 | 1.4:-40475211 | None:intergenic |
| CTTTGATCTTGAACACTAGA+AGG | 0.383567 | 1.4:-40477989 | None:intergenic |
| GGCTAACTACATGGGACAAA+TGG | 0.386586 | 1.4:+40481594 | MS.gene90011:CDS |
| CCTAGATCTACTTCAGATCT+AGG | 0.390249 | 1.4:-40475160 | None:intergenic |
| CACATGAAGCAACGTTCAGC+TGG | 0.396922 | 1.4:-40480245 | None:intergenic |
| GGAGTATGGGAGGTGGTTAG+AGG | 0.399529 | 1.4:+40480049 | MS.gene90011:CDS |
| ACCGACCCAATGTAGCTTGC+CGG | 0.401147 | 1.4:-40475294 | None:intergenic |
| CCACCGCCGGCAAGCTACAT+TGG | 0.411064 | 1.4:+40475288 | MS.gene90011:CDS |
| AAGAGTGGAGAGCTTGTTCA+TGG | 0.411247 | 1.4:-40481623 | None:intergenic |
| TCATAGAAATTGGAATTCCT+TGG | 0.413274 | 1.4:-40479899 | None:intergenic |
| TAGATCTAGGAAGGAAGTTT+CGG | 0.421847 | 1.4:+40475173 | MS.gene90011:CDS |
| ATTTAATTAACCTTAGGATC+TGG | 0.426639 | 1.4:-40479200 | None:intergenic |
| TTCGAGCATTGAGTTCTCTC+TGG | 0.430265 | 1.4:+40485506 | MS.gene90011:CDS |
| CCTAGATCTGAAGTAGATCT+AGG | 0.442041 | 1.4:+40475160 | MS.gene90011:CDS |
| TTTGGTGGTGCAGGTGCAGA+AGG | 0.442112 | 1.4:-40478990 | None:intergenic |
| TCGTCAAGCTGCAAGATGTT+TGG | 0.442179 | 1.4:+40485456 | MS.gene90011:CDS |
| TATAATGTACCTACCTTGAC+AGG | 0.447542 | 1.4:-40479014 | None:intergenic |
| GGTTGAGTGCATCAAGCCCT+TGG | 0.448691 | 1.4:-40481519 | None:intergenic |
| ACCACCGTCCTCCTTCCCTT+GGG | 0.450800 | 1.4:-40475240 | None:intergenic |
| ATGTAGCTTGCCGGCGGTGG+TGG | 0.452764 | 1.4:-40475285 | None:intergenic |
| TTATAGTCTCTGAAAGAGAT+TGG | 0.452928 | 1.4:-40481540 | None:intergenic |
| TCCTAATATGGCTAACTACA+TGG | 0.453054 | 1.4:+40481585 | MS.gene90011:CDS |
| CTTACGGAGCACCAAATACT+TGG | 0.457443 | 1.4:+40481448 | MS.gene90011:CDS |
| CCAATGTAGCTTGCCGGCGG+TGG | 0.460727 | 1.4:-40475288 | None:intergenic |
| AGTATTTGGTGCTCCGTAAG+AGG | 0.471286 | 1.4:-40481445 | None:intergenic |
| CGTTGCTTCATGTGGATTGG+TGG | 0.475727 | 1.4:+40480254 | MS.gene90011:CDS |
| AAGTCAAATTGAGCCTCTTA+CGG | 0.480461 | 1.4:+40481432 | MS.gene90011:CDS |
| CACCGCCGGCAAGCTACATT+GGG | 0.481243 | 1.4:+40475289 | MS.gene90011:CDS |
| ACAGAGAATTCATCATCATC+AGG | 0.483003 | 1.4:+40478626 | MS.gene90011:intron |
| GAGGTTTGAAAGGTAGAGAT+AGG | 0.486523 | 1.4:+40475341 | MS.gene90011:CDS |
| CGACTAGAACAGAGCACCCA+AGG | 0.490004 | 1.4:+40475224 | MS.gene90011:CDS |
| GTTGAGTGCATCAAGCCCTT+GGG | 0.490876 | 1.4:-40481518 | None:intergenic |
| TCGGTCGGATTTGGATAAAA+GGG | 0.500619 | 1.4:+40475312 | MS.gene90011:CDS |
| TATTTGGTATTAGGCTAGCA+TGG | 0.500668 | 1.4:+40478887 | MS.gene90011:intron |
| TTCATGCAAGTGTTCATCTA+CGG | 0.502953 | 1.4:-40480105 | None:intergenic |
| ACCAAATACTTGGTATATGC+GGG | 0.505004 | 1.4:+40481458 | MS.gene90011:CDS |
| ACACTATTCTTGGCGAGGAC+GGG | 0.506076 | 1.4:-40485533 | None:intergenic |
| CCAAGGTTCAATGGCTGAGG+AGG | 0.510613 | 1.4:+40475063 | None:intergenic |
| GGAGGGACGCGAACCCAAGC+AGG | 0.512287 | 1.4:+40475081 | MS.gene90011:CDS |
| ACTTGCATGAAAATGAGCTT+AGG | 0.517257 | 1.4:+40480117 | MS.gene90011:CDS |
| AAAACCATCTCAACCGTCCA+TGG | 0.517927 | 1.4:+40478941 | MS.gene90011:CDS |
| TTTACCTTAATGAGTTCAGA+TGG | 0.518372 | 1.4:-40480284 | None:intergenic |
| ATCTCAACCGTCCATGGAGT+TGG | 0.523885 | 1.4:+40478947 | MS.gene90011:CDS |
| CACCAAATACTTGGTATATG+CGG | 0.532159 | 1.4:+40481457 | MS.gene90011:CDS |
| AGGAAGGAAGTTTCGGACGC+TGG | 0.532617 | 1.4:+40475180 | MS.gene90011:CDS |
| ACCTTTGAATTAGATGGTGG+TGG | 0.533763 | 1.4:-40478704 | None:intergenic |
| AACTCCATGGACGGTTGAGA+TGG | 0.534438 | 1.4:-40478945 | None:intergenic |
| GATGCAGACGATGAACTGTT+TGG | 0.535085 | 1.4:-40485420 | None:intergenic |
| CAGCTGAACGTTGCTTCATG+TGG | 0.535836 | 1.4:+40480246 | MS.gene90011:CDS |
| CACACTATTCTTGGCGAGGA+CGG | 0.538683 | 1.4:-40485534 | None:intergenic |
| TGGTTTGCCAACTCCATGGA+CGG | 0.539075 | 1.4:-40478954 | None:intergenic |
| GGTCGGATTTGGATAAAAGG+GGG | 0.539275 | 1.4:+40475314 | MS.gene90011:CDS |
| ATCAACACAAGAGGCAGAAG+AGG | 0.540377 | 1.4:+40481489 | MS.gene90011:CDS |
| CGGTCGGATTTGGATAAAAG+GGG | 0.540657 | 1.4:+40475313 | MS.gene90011:CDS |
| TCGTTGGTTTGCCAACTCCA+TGG | 0.541761 | 1.4:-40478958 | None:intergenic |
| GAACGTTGCTTCATGTGGAT+TGG | 0.542533 | 1.4:+40480251 | MS.gene90011:CDS |
| ATTTGGTATTAGGCTAGCAT+GGG | 0.543696 | 1.4:+40478888 | MS.gene90011:intron |
| GGTGGTTAGAGGAGCATCAC+AGG | 0.543826 | 1.4:+40480060 | MS.gene90011:CDS |
| ACATGAAGCAACGTTCAGCT+GGG | 0.545343 | 1.4:-40480244 | None:intergenic |
| TCTATGAATAGCATTAGCTC+AGG | 0.548228 | 1.4:+40479915 | MS.gene90011:CDS |
| GCTACATGCATTGGTTGAGA+TGG | 0.551490 | 1.4:-40478680 | None:intergenic |
| AGGGAAGGAGGACGGTGGTG+CGG | 0.552751 | 1.4:+40475244 | MS.gene90011:CDS |
| AAATGAGCTTAGGTTATATG+TGG | 0.558714 | 1.4:+40480127 | MS.gene90011:CDS |
| TAGGGCGTGTTAATGGGTGG+AGG | 0.559293 | 1.4:+40479858 | MS.gene90011:intron |
| ACCACCACCATCTAATTCAA+AGG | 0.566192 | 1.4:+40478703 | MS.gene90011:CDS |
| AGCACCCAAGGGAAGGAGGA+CGG | 0.567402 | 1.4:+40475236 | MS.gene90011:CDS |
| GAGTTGCAAACAGATGATGC+TGG | 0.568375 | 1.4:+40475123 | MS.gene90011:CDS |
| TTGGTGGTGCAGGTGCAGAA+GGG | 0.571374 | 1.4:-40478989 | None:intergenic |
| AGGACGGTGGTGCGGAGACG+AGG | 0.573012 | 1.4:+40475252 | MS.gene90011:CDS |
| GGAGCCACTTGTTATTGGAG+AGG | 0.576956 | 1.4:-40478916 | None:intergenic |
| GGTGGTGGTGCTACATGCAT+TGG | 0.577778 | 1.4:-40478689 | None:intergenic |
| AGAACAGAGCACCCAAGGGA+AGG | 0.580365 | 1.4:+40475229 | MS.gene90011:CDS |
| GCAGAAGAGGCACTTTCCCA+AGG | 0.580930 | 1.4:+40481502 | MS.gene90011:CDS |
| GGGAAAATGTTAAGAGTTGG+TGG | 0.582239 | 1.4:-40478659 | None:intergenic |
| CAATGTTTGATGTGGAGTAT+GGG | 0.584437 | 1.4:+40480036 | MS.gene90011:CDS |
| AGAGGCTGCAATGTTTGATG+TGG | 0.585256 | 1.4:+40480028 | MS.gene90011:intron |
| ATGTAGTTAGCCATATTAGG+AGG | 0.586012 | 1.4:-40481583 | None:intergenic |
| TATACCTTTGAATTAGATGG+TGG | 0.586657 | 1.4:-40478707 | None:intergenic |
| GCAAGCTACATTGGGTCGGT+CGG | 0.587942 | 1.4:+40475297 | MS.gene90011:CDS |
| AGTTGCAAACAGATGATGCT+GGG | 0.588971 | 1.4:+40475124 | MS.gene90011:CDS |
| CAACCAAGGTTCAATGGCTG+AGG | 0.589265 | 1.4:+40475060 | None:intergenic |
| GATCTGAAGTAGATCTAGGA+AGG | 0.590009 | 1.4:+40475164 | MS.gene90011:CDS |
| TCTCATCGCACCACCACCGC+CGG | 0.594756 | 1.4:+40475275 | MS.gene90011:CDS |
| CCTAATATGGCTAACTACAT+GGG | 0.597846 | 1.4:+40481586 | MS.gene90011:CDS |
| CAGAAGAGGCACTTTCCCAA+GGG | 0.599073 | 1.4:+40481503 | MS.gene90011:CDS |
| CTACATGCATTGGTTGAGAT+GGG | 0.602831 | 1.4:-40478679 | None:intergenic |
| GATGGGAAAATGTTAAGAGT+TGG | 0.603515 | 1.4:-40478662 | None:intergenic |
| TCTCACAAAACTTTCAAGAG+TGG | 0.609018 | 1.4:-40481638 | None:intergenic |
| ACAGAGCACCCAAGGGAAGG+AGG | 0.610264 | 1.4:+40475232 | MS.gene90011:CDS |
| TGCACCACCAAAACCTGTCA+AGG | 0.616194 | 1.4:+40479001 | MS.gene90011:CDS |
| TTCAGCAGCTAGAAACAAGT+AGG | 0.617268 | 1.4:+40479482 | MS.gene90011:CDS |
| CATGAAGCAACGTTCAGCTG+GGG | 0.618932 | 1.4:-40480243 | None:intergenic |
| CACTCACACTATTCTTGGCG+AGG | 0.619291 | 1.4:-40485538 | None:intergenic |
| CAAGGTTCAATGGCTGAGGA+GGG | 0.623857 | 1.4:+40475064 | None:intergenic |
| TTGATGTGGAGTATGGGAGG+TGG | 0.624452 | 1.4:+40480042 | MS.gene90011:CDS |
| GCCGGCAAGCTACATTGGGT+CGG | 0.630454 | 1.4:+40475293 | MS.gene90011:CDS |
| GCAGAAAGAGAATAATCGCA+AGG | 0.635102 | 1.4:+40479139 | MS.gene90011:intron |
| CACTGCAGGCAGATAATCTG+AGG | 0.637739 | 1.4:+40485395 | MS.gene90011:intron |
| ACTTCAAGTTCTGAACATGA+AGG | 0.639217 | 1.4:+40479167 | MS.gene90011:CDS |
| GTTGCAACAATCAACACAAG+AGG | 0.644854 | 1.4:+40481480 | MS.gene90011:CDS |
| TTAACCTCTCCAATAACAAG+TGG | 0.650451 | 1.4:+40478912 | MS.gene90011:CDS |
| GACTAGAACAGAGCACCCAA+GGG | 0.652679 | 1.4:+40475225 | MS.gene90011:CDS |
| TGTTTGATGTGGAGTATGGG+AGG | 0.654392 | 1.4:+40480039 | MS.gene90011:CDS |
| GACCCAATGTAGCTTGCCGG+CGG | 0.665901 | 1.4:-40475291 | None:intergenic |
| AAGACTTGCTCAGAATAGAG+AGG | 0.666657 | 1.4:+40479298 | MS.gene90011:CDS |
| ACCCAAGGGAAGGAGGACGG+TGG | 0.673370 | 1.4:+40475239 | MS.gene90011:CDS |
| AAAATGTTAAGAGTTGGTGG+TGG | 0.691086 | 1.4:-40478656 | None:intergenic |
| GTCGGATTTGGATAAAAGGG+GGG | 0.695349 | 1.4:+40475315 | MS.gene90011:CDS |
| TGCAAACAGATGATGCTGGG+AGG | 0.745296 | 1.4:+40475127 | MS.gene90011:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 40475073 | 40485552 | 40475073 | ID=MS.gene90011 |
| chr1.4 | mRNA | 40475073 | 40485552 | 40475073 | ID=MS.gene90011.t1;Parent=MS.gene90011 |
| chr1.4 | exon | 40475073 | 40475362 | 40475073 | ID=MS.gene90011.t1.exon1;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40475073 | 40475362 | 40475073 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40477907 | 40478013 | 40477907 | ID=MS.gene90011.t1.exon2;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40477907 | 40478013 | 40477907 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40478630 | 40478724 | 40478630 | ID=MS.gene90011.t1.exon3;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40478630 | 40478724 | 40478630 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40478900 | 40479022 | 40478900 | ID=MS.gene90011.t1.exon4;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40478900 | 40479022 | 40478900 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40479143 | 40479211 | 40479143 | ID=MS.gene90011.t1.exon5;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40479143 | 40479211 | 40479143 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40479290 | 40479349 | 40479290 | ID=MS.gene90011.t1.exon6;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40479290 | 40479349 | 40479290 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40479475 | 40479552 | 40479475 | ID=MS.gene90011.t1.exon7;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40479475 | 40479552 | 40479475 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40479861 | 40479936 | 40479861 | ID=MS.gene90011.t1.exon8;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40479861 | 40479936 | 40479861 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40480030 | 40480301 | 40480030 | ID=MS.gene90011.t1.exon9;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40480030 | 40480301 | 40480030 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40481424 | 40481663 | 40481424 | ID=MS.gene90011.t1.exon10;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40481424 | 40481663 | 40481424 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| chr1.4 | exon | 40485403 | 40485552 | 40485403 | ID=MS.gene90011.t1.exon11;Parent=MS.gene90011.t1 |
| chr1.4 | CDS | 40485403 | 40485552 | 40485403 | ID=cds.MS.gene90011.t1;Parent=MS.gene90011.t1 |
| Gene Sequence |
| Protein sequence |
