AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007814.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007814.01.T01 MTR_2g033020 68.116 207 21 4 34 195 165 371 6.01e-82 251
MsG0280007814.01.T01 MTR_1g097610 34.615 104 65 2 80 181 374 476 3.85e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007814.01.T01 AT5G30510 65.657 198 24 3 42 195 180 377 4.85e-77 238
MsG0280007814.01.T01 AT1G71720 38.462 104 61 2 80 181 360 462 4.21e-13 68.6
MsG0280007814.01.T01 AT3G23700 40.506 79 41 2 84 156 198 276 2.55e-11 63.2
MsG0280007814.01.T01 AT5G14580 45.946 74 38 2 84 156 680 752 4.83e-11 62.4

Find 57 sgRNAs with CRISPR-Local

Find 445 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAATACAAGCGTTGGATTA+CGG 0.315930 2:-21094940 None:intergenic
GGCTGAAGTTGAAGCCTTAA+GGG 0.370323 2:+21094068 MsG0280007814.01.T01:CDS
TATTAACAAGATTAAGTTGC+AGG 0.372920 2:+21097044 MsG0280007814.01.T01:CDS
TGGCTGAAGTTGAAGCCTTA+AGG 0.400415 2:+21094067 MsG0280007814.01.T01:CDS
TGTAGGTTCCAACTTCTTTG+TGG 0.443531 2:-21094903 None:intergenic
GCAGATTATGATGCAAATAA+AGG 0.450359 2:+21094036 MsG0280007814.01.T01:intron
GTTGAAAGAGGGAGCACAAT+GGG 0.484210 2:-21089972 None:intergenic
TGGCTCGTGCTGATATGCTT+AGG 0.493754 2:+21095313 MsG0280007814.01.T01:CDS
ACCGTTGACATCTGTGAGAA+TGG 0.495475 2:-21094098 None:intergenic
GACTTACACGGCCTCTCTCC+CGG 0.497880 2:-21094877 None:intergenic
AGAATGGAACAAATCCCTTA+AGG 0.501700 2:-21094082 None:intergenic
TGTCGAGATAGAGTTGAAAG+AGG 0.512283 2:-21089984 None:intergenic
ATATCCAGGCTGAGCTTGCA+TGG 0.513898 2:+21093760 MsG0280007814.01.T01:intron
ATGTCGACGAAGGCACCATA+TGG 0.515178 2:-21094657 None:intergenic
GTGCAAAGCCTAAAACCATA+TGG 0.518779 2:+21094642 MsG0280007814.01.T01:CDS
TTCAACTCACTATCAACTTG+TGG 0.523819 2:-21089933 None:intergenic
AAGTCTTTCCACAAAGAAGT+TGG 0.524278 2:+21094895 MsG0280007814.01.T01:CDS
TGATGATCTTAAGTCATGAC+CGG 0.527190 2:+21094858 MsG0280007814.01.T01:CDS
GGTGCCTTCGTCGACATTGG+TGG 0.530078 2:+21094663 MsG0280007814.01.T01:CDS
AGCAGAAGATGCTGTTGTCA+AGG 0.532605 2:+21093804 MsG0280007814.01.T01:CDS
TTTCTTATAGGCGGAGGAGA+TGG 0.533602 2:+21095251 MsG0280007814.01.T01:intron
TTAATATACAACATATCAAG+TGG 0.541775 2:-21097027 None:intergenic
AGGCTGAGCTTGCATGGGAA+AGG 0.542586 2:+21093766 MsG0280007814.01.T01:intron
ACCTTCTCGAATACAAGCGT+TGG 0.548772 2:-21094947 None:intergenic
TATGGTGCCTTCGTCGACAT+TGG 0.551788 2:+21094660 MsG0280007814.01.T01:CDS
AATAGCGCAAGCAGAAGCCA+TGG 0.569153 2:+21095293 MsG0280007814.01.T01:CDS
AAGCATATCAGCACGAGCCA+TGG 0.569475 2:-21095310 None:intergenic
GTCGACATTGGTGGAATCAG+TGG 0.575133 2:+21094672 MsG0280007814.01.T01:CDS
AAGAAGTTGGAACCTACACC+TGG 0.576278 2:+21094908 MsG0280007814.01.T01:CDS
GGATTACGGATCATATCTCC+AGG 0.580645 2:-21094926 None:intergenic
GCAGAAGATGCTGTTGTCAA+GGG 0.582875 2:+21093805 MsG0280007814.01.T01:CDS
GTCTCCTCATCGTTGCTAAG+TGG 0.583348 2:+21097066 MsG0280007814.01.T01:CDS
CGGATCATATCTCCAGGTGT+AGG 0.593928 2:-21094920 None:intergenic
TTAAGTCATGACCGGGAGAG+AGG 0.596196 2:+21094866 MsG0280007814.01.T01:CDS
ATTGCAACTGTTCTTCAACC+TGG 0.598301 2:+21094738 MsG0280007814.01.T01:CDS
TATCCAGGCTGAGCTTGCAT+GGG 0.601092 2:+21093761 MsG0280007814.01.T01:intron
GTCGAGATAGAGTTGAAAGA+GGG 0.606912 2:-21089983 None:intergenic
TCAACCTGGTGATACTCTGA+AGG 0.607339 2:+21094752 MsG0280007814.01.T01:CDS
GATAAGGAATCCTCATCGAA+TGG 0.607979 2:+21096987 MsG0280007814.01.T01:intron
TCCATTCTCACAGATGTCAA+CGG 0.609353 2:+21094097 MsG0280007814.01.T01:CDS
ATCGAATGGTAATGTTGATG+AGG 0.611204 2:+21097001 MsG0280007814.01.T01:CDS
GACTGATTTGACTGACATGA+AGG 0.614351 2:-21094698 None:intergenic
AGGAATCGATCAGTTGTCAC+CGG 0.629357 2:+21094615 MsG0280007814.01.T01:intron
TGCAAATAAAGGTGGTGTGG+TGG 0.633576 2:+21094047 MsG0280007814.01.T01:CDS
TTTACCTTCAGAGTATCACC+AGG 0.639151 2:-21094756 None:intergenic
GATTATGATGCAAATAAAGG+TGG 0.642157 2:+21094039 MsG0280007814.01.T01:intron
GATGATCTTAAGTCATGACC+GGG 0.648527 2:+21094859 MsG0280007814.01.T01:CDS
CTCGACAACAGTCTCAGTCA+CGG 0.652549 2:+21090000 MsG0280007814.01.T01:CDS
TCCAACGCTTGTATTCGAGA+AGG 0.655139 2:+21094946 MsG0280007814.01.T01:CDS
ATCAACATTACCATTCGATG+AGG 0.657490 2:-21096997 None:intergenic
TGATGCAAATAAAGGTGGTG+TGG 0.661054 2:+21094044 MsG0280007814.01.T01:CDS
GATTCCACCAATGTCGACGA+AGG 0.664162 2:-21094667 None:intergenic
ATATGCTTAGGTTCAGCCAG+AGG 0.691634 2:+21095325 MsG0280007814.01.T01:CDS
GAATCCACTTAGCAACGATG+AGG 0.695050 2:-21097070 None:intergenic
AGTTGAAAGAGGGAGCACAA+TGG 0.696830 2:-21089973 None:intergenic
TCTTTGTGGAAAGACTTACA+CGG 0.712533 2:-21094889 None:intergenic
TGATTTGACTGACATGAAGG+AGG 0.733070 2:-21094695 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAATAAAATTTCTAAA+CGG + Chr2:21090933-21090952 MsG0280007814.01.T01:intron 10.0%
!!! AAATCAAATTATTTTTTTGT+TGG - Chr2:21091504-21091523 None:intergenic 10.0%
!!! GAAGATTTAAAATAAAAATA+TGG - Chr2:21091617-21091636 None:intergenic 10.0%
!!! GTTATTTTTATTTTTTTAGA+GGG - Chr2:21090982-21091001 None:intergenic 10.0%
!!! TTGTAAGTAATTTTATTTTA+TGG - Chr2:21093027-21093046 None:intergenic 10.0%
!!! TTTTATGTATTTTAACTATT+AGG + Chr2:21093178-21093197 MsG0280007814.01.T01:intron 10.0%
!!! TTTTGTAATTTTAAACATTT+AGG - Chr2:21092909-21092928 None:intergenic 10.0%
!!! TTTTTAATTTATGATGAAAA+GGG + Chr2:21092620-21092639 MsG0280007814.01.T01:intron 10.0%
!!! TTTTTTAATTTATGATGAAA+AGG + Chr2:21092619-21092638 MsG0280007814.01.T01:intron 10.0%
!!! TTTTTTTAATAACTTTTTTG+AGG - Chr2:21091302-21091321 None:intergenic 10.0%
!! AACCAAAAAAAAATTATGAA+TGG - Chr2:21090843-21090862 None:intergenic 15.0%
!! AATGATTTATGAAATTGTAA+TGG + Chr2:21091373-21091392 MsG0280007814.01.T01:intron 15.0%
!! ACAAAAGAAAAAATAACATT+AGG - Chr2:21096465-21096484 None:intergenic 15.0%
!!! AACACATTTTAGTAATTTTA+TGG - Chr2:21093372-21093391 None:intergenic 15.0%
!!! ACTTGTTTTAAGATATATTA+AGG - Chr2:21091582-21091601 None:intergenic 15.0%
!!! ATTGTTTTTTTGTAGAATTT+TGG + Chr2:21092595-21092614 MsG0280007814.01.T01:intron 15.0%
!!! ATTTGGATTTTTTTAGTTTA+TGG + Chr2:21092444-21092463 MsG0280007814.01.T01:intron 15.0%
!!! GGTTATTTTTATTTTTTTAG+AGG - Chr2:21090983-21091002 None:intergenic 15.0%
!!! TATACATGTTAACTTTTAAT+CGG + Chr2:21095220-21095239 MsG0280007814.01.T01:intron 15.0%
!!! TTGGGTTTTTTTTTTTTTTA+AGG - Chr2:21091277-21091296 None:intergenic 15.0%
!!! TTTGCAATTTTATATTTTCA+AGG + Chr2:21093390-21093409 MsG0280007814.01.T01:intron 15.0%
!!! TTTTATGATTTTTATTGAGT+TGG - Chr2:21090784-21090803 None:intergenic 15.0%
!!! TTTTCTTATGCTATATAATT+TGG - Chr2:21095433-21095452 None:intergenic 15.0%
!! AAAGCTAAATTGTGAAATAA+TGG + Chr2:21096851-21096870 MsG0280007814.01.T01:intron 20.0%
!! AAGCTAAATTGTGAAATAAT+GGG + Chr2:21096852-21096871 MsG0280007814.01.T01:intron 20.0%
!! ATAAACAACATTATACTGTA+AGG - Chr2:21092793-21092812 None:intergenic 20.0%
!! ATATATAAGCCTATAAATAG+AGG - Chr2:21096671-21096690 None:intergenic 20.0%
!! ATCAATAGAGAAACATAAAA+CGG - Chr2:21091004-21091023 None:intergenic 20.0%
!! ATCTCATTCTTTATATGATT+AGG + Chr2:21094835-21094854 MsG0280007814.01.T01:intron 20.0%
!! GAATTTGATATGACTAAATT+AGG - Chr2:21090422-21090441 None:intergenic 20.0%
!! GATATATTAAGGATTTCAAA+TGG - Chr2:21091571-21091590 None:intergenic 20.0%
!! GCTTGAAAAATAATCATTAA+AGG - Chr2:21093464-21093483 None:intergenic 20.0%
!! TCCTTAAAACATTTACAATA+GGG - Chr2:21091121-21091140 None:intergenic 20.0%
!! TGACTAGCAAAAAAATATTT+CGG - Chr2:21093280-21093299 None:intergenic 20.0%
!! TGAGATAGTTAAGTTAATTT+GGG + Chr2:21092824-21092843 MsG0280007814.01.T01:intron 20.0%
!! TTAATATACAACATATCAAG+TGG - Chr2:21097030-21097049 None:intergenic 20.0%
!! TTATGAATTTCTCAAGAAAA+TGG - Chr2:21090584-21090603 None:intergenic 20.0%
!! TTCCTTAAAACATTTACAAT+AGG - Chr2:21091122-21091141 None:intergenic 20.0%
!! TTGAGATAGTTAAGTTAATT+TGG + Chr2:21092823-21092842 MsG0280007814.01.T01:intron 20.0%
!!! AAAGAGAATTTTGTAATTGT+TGG + Chr2:21093696-21093715 MsG0280007814.01.T01:intron 20.0%
!!! ATTTTTTTAGAGGGATAAAA+CGG - Chr2:21090973-21090992 None:intergenic 20.0%
!!! CTAAACTTCTAATTTTGATA+GGG - Chr2:21094430-21094449 None:intergenic 20.0%
!!! GACCATTCATAATTTTTTTT+TGG + Chr2:21090838-21090857 MsG0280007814.01.T01:intron 20.0%
!!! GATGCAATATATTTTATTTG+TGG + Chr2:21094264-21094283 MsG0280007814.01.T01:intron 20.0%
!!! GCTTGTTTTTTTATTGAATT+TGG + Chr2:21092427-21092446 MsG0280007814.01.T01:intron 20.0%
!!! TAAACTTCTAATTTTGATAG+GGG - Chr2:21094429-21094448 None:intergenic 20.0%
!!! TATTTTTTTGCTAGTCATTT+TGG + Chr2:21093283-21093302 MsG0280007814.01.T01:intron 20.0%
!!! TCAAATTATTTTTTTGTTGG+TGG - Chr2:21091501-21091520 None:intergenic 20.0%
!!! TTACAGTATAATGTTGTTTA+TGG + Chr2:21092792-21092811 MsG0280007814.01.T01:intron 20.0%
!!! TTTAAGATGAATTTTGATGT+GGG + Chr2:21092382-21092401 MsG0280007814.01.T01:intron 20.0%
!!! TTTTAAGATGAATTTTGATG+TGG + Chr2:21092381-21092400 MsG0280007814.01.T01:intron 20.0%
!!! TTTTAGAACTATTCATATTG+AGG + Chr2:21093490-21093509 MsG0280007814.01.T01:intron 20.0%
!!! TTTTCATTGAATTGAGTATT+TGG + Chr2:21092748-21092767 MsG0280007814.01.T01:intron 20.0%
!!! TTTTTTAGTTTATGGTGAAA+AGG + Chr2:21092452-21092471 MsG0280007814.01.T01:intron 20.0%
! AAAAATCCACTTAGAATAAG+AGG - Chr2:21096961-21096980 None:intergenic 25.0%
! AACTAACTAAAACACATTTG+AGG - Chr2:21093310-21093329 None:intergenic 25.0%
! AACTGTGAGTTAAAAATTGA+AGG + Chr2:21096606-21096625 MsG0280007814.01.T01:intron 25.0%
! AAGCTCAACAAAACTTTATA+TGG - Chr2:21090643-21090662 None:intergenic 25.0%
! AGAAGAAGAAAAGATAGATA+AGG - Chr2:21091958-21091977 None:intergenic 25.0%
! AGTGTTATATTGAAAGAGAA+AGG - Chr2:21095688-21095707 None:intergenic 25.0%
! ATGTTGTATATTACGTTAAG+TGG + Chr2:21096932-21096951 MsG0280007814.01.T01:intron 25.0%
! ATTACAAAAATGCATACAAG+AGG + Chr2:21092920-21092939 MsG0280007814.01.T01:intron 25.0%
! CTGTAACTCTATTCAAATAT+CGG - Chr2:21094798-21094817 None:intergenic 25.0%
! GACTAATTCAATTTGACTAA+TGG - Chr2:21090267-21090286 None:intergenic 25.0%
! GACTAGCAAAAAAATATTTC+GGG - Chr2:21093279-21093298 None:intergenic 25.0%
! GGAAAATAATCAAAGAAGTT+AGG - Chr2:21095162-21095181 None:intergenic 25.0%
! GTAATTAATCTGAAAGTGAT+TGG + Chr2:21093512-21093531 MsG0280007814.01.T01:intron 25.0%
! TAAAGGCTAAACATTCAATT+GGG - Chr2:21093447-21093466 None:intergenic 25.0%
! TAAGTTTAATGTTGATGTGA+TGG + Chr2:21096880-21096899 MsG0280007814.01.T01:intron 25.0%
! TAATTCAATTTGACTAATGG+TGG - Chr2:21090264-21090283 None:intergenic 25.0%
! TACTCTTAATATCTGACTAA+CGG + Chr2:21093135-21093154 MsG0280007814.01.T01:intron 25.0%
! TGATGGTTCAATAAAATTTC+TGG + Chr2:21096897-21096916 MsG0280007814.01.T01:intron 25.0%
! TGTTAGTGAATTATAAACCA+AGG + Chr2:21090381-21090400 MsG0280007814.01.T01:intron 25.0%
! TTAAAGGCTAAACATTCAAT+TGG - Chr2:21093448-21093467 None:intergenic 25.0%
! TTACAAAAATGCATACAAGA+GGG + Chr2:21092921-21092940 MsG0280007814.01.T01:intron 25.0%
! TTAGTTAGTTAATGCTTGAA+TGG + Chr2:21092978-21092997 MsG0280007814.01.T01:intron 25.0%
! TTGAATCAAAACTTGTCATT+TGG + Chr2:21094160-21094179 MsG0280007814.01.T01:intron 25.0%
! TTTGATATGACTAAATTAGG+AGG - Chr2:21090419-21090438 None:intergenic 25.0%
!! ATTAGTTTCTATTAGACGTT+GGG - Chr2:21091773-21091792 None:intergenic 25.0%
!! TAAATTGTGAAATAATGGGA+TGG + Chr2:21096856-21096875 MsG0280007814.01.T01:intron 25.0%
!! TATTAACAAGATTAAGTTGC+AGG + Chr2:21097044-21097063 MsG0280007814.01.T01:CDS 25.0%
!! TCATAAGTCAAAGTTCTAAT+AGG + Chr2:21090902-21090921 MsG0280007814.01.T01:intron 25.0%
!! TCCCTATTGTAAATGTTTTA+AGG + Chr2:21091117-21091136 MsG0280007814.01.T01:intron 25.0%
!! TTAAGAGTAAACAGTCATTT+TGG - Chr2:21093124-21093143 None:intergenic 25.0%
!! TTGATTGTTGTTGTAAAGTT+GGG + Chr2:21092339-21092358 MsG0280007814.01.T01:intron 25.0%
!!! AAAGATTTTGAGTCTGAAAT+TGG + Chr2:21092293-21092312 MsG0280007814.01.T01:intron 25.0%
!!! AAGATTAGTTTCTAGTACAT+TGG + Chr2:21092722-21092741 MsG0280007814.01.T01:intron 25.0%
!!! AATAACTTTTTTGAGGTGTT+GGG - Chr2:21091295-21091314 None:intergenic 25.0%
!!! ACAAATTTGTTAGAATTGCT+TGG + Chr2:21096810-21096829 MsG0280007814.01.T01:intron 25.0%
!!! GCTAAACTTCTAATTTTGAT+AGG - Chr2:21094431-21094450 None:intergenic 25.0%
!!! GTAGAATTGACAATTTTTTG+AGG + Chr2:21092647-21092666 MsG0280007814.01.T01:intron 25.0%
!!! GTTGATTTTTTTCTTATAGG+CGG + Chr2:21095242-21095261 MsG0280007814.01.T01:intron 25.0%
!!! TAATAACTTTTTTGAGGTGT+TGG - Chr2:21091296-21091315 None:intergenic 25.0%
!!! TACAATAGGGATTCATTTTT+TGG - Chr2:21091108-21091127 None:intergenic 25.0%
!!! TCATCTTTTAAGAGAATAAG+CGG - Chr2:21091236-21091255 None:intergenic 25.0%
!!! TCGGTTGATTTTTTTCTTAT+AGG + Chr2:21095239-21095258 MsG0280007814.01.T01:intron 25.0%
!!! TGACAATTTTTTGAGGTTTT+TGG + Chr2:21092654-21092673 MsG0280007814.01.T01:intron 25.0%
!!! TTAAGATGAATTTTGATGTG+GGG + Chr2:21092383-21092402 MsG0280007814.01.T01:intron 25.0%
AAATATACAGGGCAATAGTT+GGG - Chr2:21096535-21096554 None:intergenic 30.0%
AACAACAAAAAAACTGACCT+TGG - Chr2:21092321-21092340 None:intergenic 30.0%
AACAAGTTCCTCAAATATAC+AGG - Chr2:21096547-21096566 None:intergenic 30.0%
AATCAATTGAAAGAGGATGA+TGG - Chr2:21095642-21095661 None:intergenic 30.0%
AATTAACAAGCAAATACCTC+TGG - Chr2:21095344-21095363 None:intergenic 30.0%
ACAAGTTCCTCAAATATACA+GGG - Chr2:21096546-21096565 None:intergenic 30.0%
AGAAGAAAAGATAGATAAGG+TGG - Chr2:21091955-21091974 None:intergenic 30.0%
AGAAGAGATTATTGAGTTTG+AGG + Chr2:21094505-21094524 MsG0280007814.01.T01:intron 30.0%
AGAGAAGAATCAATTGAAAG+AGG - Chr2:21095649-21095668 None:intergenic 30.0%
ATATCGGTGAATTGTATTAC+AGG - Chr2:21094782-21094801 None:intergenic 30.0%
ATGACAACGTCTTAATATTG+AGG + Chr2:21093419-21093438 MsG0280007814.01.T01:intron 30.0%
ATGAGAATGCCTCTATTTAT+AGG + Chr2:21096659-21096678 MsG0280007814.01.T01:intron 30.0%
ATTGCAATGGAATACAATAC+AGG - Chr2:21092149-21092168 None:intergenic 30.0%
CAATAAAGGCAAAAAGGTAA+AGG - Chr2:21096408-21096427 None:intergenic 30.0%
CACACATTTAGAGAACAAAA+TGG - Chr2:21093211-21093230 None:intergenic 30.0%
CACATATGAGTGAAAAAGAT+TGG - Chr2:21094005-21094024 None:intergenic 30.0%
CGATATTTGAATAGAGTTAC+AGG + Chr2:21094796-21094815 MsG0280007814.01.T01:intron 30.0%
CGCATATGTAAACAGTAAAA+AGG - Chr2:21090109-21090128 None:intergenic 30.0%
CGTGGCAAATTAAAAATCAA+CGG + Chr2:21095519-21095538 MsG0280007814.01.T01:intron 30.0%
CGTGGCAAATTAAAAATCAA+CGG - Chr2:21095538-21095519 None:intergenic 30.0%
CTCACAAAAGATTACATCAA+TGG - Chr2:21090344-21090363 None:intergenic 30.0%
GAATATCATATCAGTAGTCA+TGG + Chr2:21095027-21095046 MsG0280007814.01.T01:intron 30.0%
GATGAAGTTGAAAGAATCAA+AGG - Chr2:21090457-21090476 None:intergenic 30.0%
GATTATGATGCAAATAAAGG+TGG + Chr2:21094039-21094058 MsG0280007814.01.T01:intron 30.0%
GCAGATTATGATGCAAATAA+AGG + Chr2:21094036-21094055 MsG0280007814.01.T01:intron 30.0%
GGAGAAAATCAACTCATAAA+TGG - Chr2:21093979-21093998 None:intergenic 30.0%
GGTCAAAATGAAATTGATGA+TGG + Chr2:21093717-21093736 MsG0280007814.01.T01:intron 30.0%
GTATATGTTAGATCAACACA+TGG - Chr2:21090699-21090718 None:intergenic 30.0%
TACGAAGAAAATAGGCAAAA+GGG - Chr2:21094473-21094492 None:intergenic 30.0%
TATACCAATGTTGTTCTGAT+TGG + Chr2:21090525-21090544 MsG0280007814.01.T01:intron 30.0%
TCAAATATGCTTGCAATTCA+AGG - Chr2:21090190-21090209 None:intergenic 30.0%
TCAGTCAAAGTTTAGCATAT+TGG + Chr2:21093861-21093880 MsG0280007814.01.T01:intron 30.0%
TCTCCATATGTTTACTTGTT+GGG + Chr2:21090285-21090304 MsG0280007814.01.T01:intron 30.0%
TGACAACGTCTTAATATTGA+GGG + Chr2:21093420-21093439 MsG0280007814.01.T01:intron 30.0%
TTACTGCACCTAAACATAAA+TGG + Chr2:21096728-21096747 MsG0280007814.01.T01:intron 30.0%
TTAGTTTCTATTAGACGTTG+GGG - Chr2:21091772-21091791 None:intergenic 30.0%
TTGCAATGGAATACAATACA+GGG - Chr2:21092148-21092167 None:intergenic 30.0%
TTTATCTTTGATGTGTGTAG+TGG + Chr2:21096764-21096783 MsG0280007814.01.T01:intron 30.0%
! AAGTTAATTTGGGAGTCTTT+CGG + Chr2:21092834-21092853 MsG0280007814.01.T01:intron 30.0%
! ACTCATATGTGTAATTTGTG+TGG + Chr2:21094014-21094033 MsG0280007814.01.T01:intron 30.0%
! ACTCTGGAAAACAAACAATA+AGG - Chr2:21096269-21096288 None:intergenic 30.0%
! AGATAACAAAGCAAAGCATT+TGG - Chr2:21095130-21095149 None:intergenic 30.0%
! ATTTTCTTCGTAGAAAACAC+CGG + Chr2:21094481-21094500 MsG0280007814.01.T01:intron 30.0%
! CTAAACATAAATGGTAGTGT+GGG + Chr2:21096737-21096756 MsG0280007814.01.T01:intron 30.0%
! GTGTTTTCTACGAAGAAAAT+AGG - Chr2:21094481-21094500 None:intergenic 30.0%
! GTTGATTGTTGTTGTAAAGT+TGG + Chr2:21092338-21092357 MsG0280007814.01.T01:intron 30.0%
! TGTCATTTGGCAAGTAAAAA+AGG + Chr2:21094173-21094192 MsG0280007814.01.T01:intron 30.0%
! TTTTTGCATGTCTATACTTC+AGG - Chr2:21096701-21096720 None:intergenic 30.0%
!! ATCTTTTAAGAGAATAAGCG+GGG - Chr2:21091234-21091253 None:intergenic 30.0%
!! ATTGAGTTGGCATCAAATAA+GGG - Chr2:21090771-21090790 None:intergenic 30.0%
!! ATTTGCAATCTTTAGAGCTT+AGG - Chr2:21094233-21094252 None:intergenic 30.0%
!! CATCTTTTAAGAGAATAAGC+GGG - Chr2:21091235-21091254 None:intergenic 30.0%
!! GATTAGTTTCTATTAGACGT+TGG - Chr2:21091774-21091793 None:intergenic 30.0%
!! TATTGAGTTGGCATCAAATA+AGG - Chr2:21090772-21090791 None:intergenic 30.0%
!! TTATTGTTTGTTTTCCAGAG+TGG + Chr2:21096268-21096287 MsG0280007814.01.T01:intron 30.0%
!!! ATTATTTTTTTGTTGGTGGC+TGG - Chr2:21091497-21091516 None:intergenic 30.0%
!!! GGGTGTTTTTTTTAGTCATT+TGG + Chr2:21092941-21092960 MsG0280007814.01.T01:intron 30.0%
!!! TTATTTTTTTGTTGGTGGCT+GGG - Chr2:21091496-21091515 None:intergenic 30.0%
AAACTGGAGCATATTTGTAC+TGG - Chr2:21095473-21095492 None:intergenic 35.0%
AACAAAAGCTCCACTAGTAT+CGG - Chr2:21093584-21093603 None:intergenic 35.0%
AACAACTGACAAGCACAAAA+TGG + Chr2:21092070-21092089 MsG0280007814.01.T01:intron 35.0%
AACTCAATAATCTCTTCTCC+CGG - Chr2:21094503-21094522 None:intergenic 35.0%
AAGGTGCAATAAAGGCAAAA+AGG - Chr2:21096414-21096433 None:intergenic 35.0%
AAGTCTTTCCACAAAGAAGT+TGG + Chr2:21094895-21094914 MsG0280007814.01.T01:CDS 35.0%
ACTATTGCCCTGTATATTTG+AGG + Chr2:21096536-21096555 MsG0280007814.01.T01:intron 35.0%
ACTCTTTGCAAACTAATGGT+TGG - Chr2:21090219-21090238 None:intergenic 35.0%
AGAATGGAACAAATCCCTTA+AGG - Chr2:21094085-21094104 None:intergenic 35.0%
AGGATTTCAAATGGCATTCT+AGG - Chr2:21091562-21091581 None:intergenic 35.0%
AGTCAAAGGTGAAGAAGATA+AGG - Chr2:21090670-21090689 None:intergenic 35.0%
AGTTCCATCATAGATGGTAT+AGG - Chr2:21094314-21094333 None:intergenic 35.0%
ATATACTTCCTCCTCAAGTT+CGG + Chr2:21090713-21090732 MsG0280007814.01.T01:intron 35.0%
ATCAACATTACCATTCGATG+AGG - Chr2:21097000-21097019 None:intergenic 35.0%
ATCCAATTATGAATGGTCGT+AGG - Chr2:21090867-21090886 None:intergenic 35.0%
ATGAGTGAAAAAGATTGGCA+GGG - Chr2:21094000-21094019 None:intergenic 35.0%
CAAATATACAGGGCAATAGT+TGG - Chr2:21096536-21096555 None:intergenic 35.0%
CAACCCAACAAGTAAACATA+TGG - Chr2:21090291-21090310 None:intergenic 35.0%
CAATGGCTATTGAGAGAAAA+TGG + Chr2:21094198-21094217 MsG0280007814.01.T01:intron 35.0%
CACATAAGTTCCATCATAGA+TGG - Chr2:21094320-21094339 None:intergenic 35.0%
CATATGATTGAGGAATTCAG+AGG + Chr2:21096382-21096401 MsG0280007814.01.T01:intron 35.0%
CATCACTCTTTGCAAACTAA+TGG - Chr2:21090223-21090242 None:intergenic 35.0%
CCACACTACCATTTATGTTT+AGG - Chr2:21096739-21096758 None:intergenic 35.0%
CCTACATTGTGACATATATC+AGG + Chr2:21090164-21090183 MsG0280007814.01.T01:intron 35.0%
CCTGATATATGTCACAATGT+AGG - Chr2:21090167-21090186 None:intergenic 35.0%
CTACGAAGAAAATAGGCAAA+AGG - Chr2:21094474-21094493 None:intergenic 35.0%
CTCAGATGCACAAGTTATTA+TGG - Chr2:21090074-21090093 None:intergenic 35.0%
CTTGAGTTTAAGAGATATCC+AGG + Chr2:21093746-21093765 MsG0280007814.01.T01:intron 35.0%
GACAACGCATAAAATATGCA+AGG + Chr2:21091456-21091475 MsG0280007814.01.T01:intron 35.0%
GTCTCCATATGTTTACTTGT+TGG + Chr2:21090284-21090303 MsG0280007814.01.T01:intron 35.0%
TAAGGTGGATATGTGAAATG+TGG - Chr2:21091940-21091959 None:intergenic 35.0%
TACAACAATACGTAAGAGCA+AGG - Chr2:21096433-21096452 None:intergenic 35.0%
TACCTACGACCATTCATAAT+TGG + Chr2:21090862-21090881 MsG0280007814.01.T01:intron 35.0%
TACGACCATTCATAATTGGA+TGG + Chr2:21090866-21090885 MsG0280007814.01.T01:intron 35.0%
TAGTTTCTATTAGACGTTGG+GGG - Chr2:21091771-21091790 None:intergenic 35.0%
TATGAGTGAAAAAGATTGGC+AGG - Chr2:21094001-21094020 None:intergenic 35.0%
TCTTAATATCTGACTAACGG+TGG + Chr2:21093138-21093157 MsG0280007814.01.T01:intron 35.0%
TCTTGTAGGATCTTACTCTT+TGG - Chr2:21095105-21095124 None:intergenic 35.0%
TCTTTGTGGAAAGACTTACA+CGG - Chr2:21094892-21094911 None:intergenic 35.0%
TGACATTACTTCAAAGTCCA+CGG + Chr2:21093603-21093622 MsG0280007814.01.T01:intron 35.0%
TGATGATCTTAAGTCATGAC+CGG + Chr2:21094858-21094877 MsG0280007814.01.T01:CDS 35.0%
TGATTTGAACAGCCATGATT+GGG + Chr2:21095943-21095962 MsG0280007814.01.T01:intron 35.0%
TGGATTACCTAATGTTTGTG+AGG + Chr2:21092674-21092693 MsG0280007814.01.T01:intron 35.0%
TGGTCGTAGACATCAAAATA+AGG - Chr2:21090823-21090842 None:intergenic 35.0%
TGTACCAATCAGAACAACAT+TGG - Chr2:21090532-21090551 None:intergenic 35.0%
TTACGTGTCTCACACATTTA+AGG - Chr2:21092881-21092900 None:intergenic 35.0%
TTACTTACAAGAGAGACACT+TGG + Chr2:21093037-21093056 MsG0280007814.01.T01:intron 35.0%
TTCAACTCACTATCAACTTG+TGG - Chr2:21089936-21089955 None:intergenic 35.0%
! AATTTGACTAATGGTGGTGA+GGG - Chr2:21090258-21090277 None:intergenic 35.0%
! AGCAAAAAAAAAGCACGAAG+TGG - Chr2:21095059-21095078 None:intergenic 35.0%
! AGTTAATTTGGGAGTCTTTC+GGG + Chr2:21092835-21092854 MsG0280007814.01.T01:intron 35.0%
! AGTTTGCTCTTTCTGTTCAT+GGG + Chr2:21095789-21095808 MsG0280007814.01.T01:intron 35.0%
! ATCGAATGGTAATGTTGATG+AGG + Chr2:21097001-21097020 MsG0280007814.01.T01:CDS 35.0%
! CCTAAACATAAATGGTAGTG+TGG + Chr2:21096736-21096755 MsG0280007814.01.T01:intron 35.0%
! GCATTTTCCTCACAAACATT+AGG - Chr2:21092684-21092703 None:intergenic 35.0%
! GCTTTGCTCTTCTTTGTTAT+TGG - Chr2:21092179-21092198 None:intergenic 35.0%
! GGCAAGTAAAAAAGGTACAA+TGG + Chr2:21094181-21094200 MsG0280007814.01.T01:intron 35.0%
! GTGGATTTTTCCACTTGATA+AGG + Chr2:21096971-21096990 MsG0280007814.01.T01:intron 35.0%
! GTTACTTTAGTCCTCAAATG+TGG + Chr2:21093327-21093346 MsG0280007814.01.T01:intron 35.0%
! TGAGCATAGATCAGTTGATA+TGG + Chr2:21091434-21091453 MsG0280007814.01.T01:intron 35.0%
! TTAGAATTGCTTGGAGTGTT+TGG + Chr2:21096819-21096838 MsG0280007814.01.T01:intron 35.0%
! TTGATTTGAACAGCCATGAT+TGG + Chr2:21095942-21095961 MsG0280007814.01.T01:intron 35.0%
! TTTTCAATTTGACACTGTCG+AGG - Chr2:21096506-21096525 None:intergenic 35.0%
! TTTTCTTCGTAGAAAACACC+GGG + Chr2:21094482-21094501 MsG0280007814.01.T01:intron 35.0%
!! TGCTATGAAAAGTGTTGAAG+TGG - Chr2:21095183-21095202 None:intergenic 35.0%
!! TGGGAGCTTTATTAATGTTG+TGG + Chr2:21092358-21092377 MsG0280007814.01.T01:intron 35.0%
!! TGTGTTGTTGTTGTTTCCAT+AGG - Chr2:21092104-21092123 None:intergenic 35.0%
!! TTGTTGTTGTTTCCATAGGA+GGG - Chr2:21092100-21092119 None:intergenic 35.0%
!!! CGTGCTTTTTTTTTGCTACT+AGG + Chr2:21095062-21095081 MsG0280007814.01.T01:intron 35.0%
!!! GATTTTTTTCTTATAGGCGG+AGG + Chr2:21095245-21095264 MsG0280007814.01.T01:intron 35.0%
!!! TATTTTTTTGTTGGTGGCTG+GGG - Chr2:21091495-21091514 None:intergenic 35.0%
AAACTGGAGCATATATGCAC+TGG + Chr2:21096133-21096152 MsG0280007814.01.T01:intron 40.0%
ACAAAATTCTCTTTCACGCC+AGG - Chr2:21093690-21093709 None:intergenic 40.0%
ACAATGTAGGAGTAGTAAGC+AGG - Chr2:21090154-21090173 None:intergenic 40.0%
ACACATGGCTTCATAGTCAA+AGG - Chr2:21090684-21090703 None:intergenic 40.0%
ACCAACGAAATCCACATTTG+AGG - Chr2:21093341-21093360 None:intergenic 40.0%
ATCTTTGATGTGTGTAGTGG+TGG + Chr2:21096767-21096786 MsG0280007814.01.T01:intron 40.0%
ATGAAATGAAGCAGCAGCAA+TGG + Chr2:21095387-21095406 MsG0280007814.01.T01:intron 40.0%
ATTGCAACTGTTCTTCAACC+TGG + Chr2:21094738-21094757 MsG0280007814.01.T01:CDS 40.0%
ATTTCTCAATGCCGAACTTG+AGG - Chr2:21090727-21090746 None:intergenic 40.0%
CAAACTTAGGCATGTAGAAC+AGG + Chr2:21093657-21093676 MsG0280007814.01.T01:intron 40.0%
CACGCTCATAAATGTCAAGT+AGG - Chr2:21094134-21094153 None:intergenic 40.0%
CCACACCATCCAATTATGAA+TGG - Chr2:21090874-21090893 None:intergenic 40.0%
CCATCATAGATGGTATAGGA+AGG - Chr2:21094310-21094329 None:intergenic 40.0%
CCATTCATAATTGGATGGTG+TGG + Chr2:21090871-21090890 MsG0280007814.01.T01:intron 40.0%
CCTTCCTATACCATCTATGA+TGG + Chr2:21094307-21094326 MsG0280007814.01.T01:intron 40.0%
CGCATAAAATATGCAAGGTC+CGG + Chr2:21091461-21091480 MsG0280007814.01.T01:intron 40.0%
CTACATGCCTAAGTTTGTAG+AGG - Chr2:21093654-21093673 None:intergenic 40.0%
CTCAATCATATGCTTCAGCT+GGG - Chr2:21096374-21096393 None:intergenic 40.0%
GATAAGGAATCCTCATCGAA+TGG + Chr2:21096987-21097006 MsG0280007814.01.T01:intron 40.0%
GATGAGGATTCCTTATCAAG+TGG - Chr2:21096984-21097003 None:intergenic 40.0%
GATGAGTAAAAGAAGTCCGT+TGG + Chr2:21096013-21096032 MsG0280007814.01.T01:intron 40.0%
GATGATCTTAAGTCATGACC+GGG + Chr2:21094859-21094878 MsG0280007814.01.T01:CDS 40.0%
GATTTGAACAGCCATGATTG+GGG + Chr2:21095944-21095963 MsG0280007814.01.T01:intron 40.0%
GCATAAAATATGCAAGGTCC+GGG + Chr2:21091462-21091481 MsG0280007814.01.T01:intron 40.0%
GGAGGATTAAGACATTTCCT+TGG - Chr2:21090401-21090420 None:intergenic 40.0%
GTAAACGAAACACCTTCCAT+TGG - Chr2:21092243-21092262 None:intergenic 40.0%
GTAAGAGCAAGGTGCAATAA+AGG - Chr2:21096422-21096441 None:intergenic 40.0%
GTCGAGATAGAGTTGAAAGA+GGG - Chr2:21089986-21090005 None:intergenic 40.0%
GTGCAAAGCCTAAAACCATA+TGG + Chr2:21094642-21094661 MsG0280007814.01.T01:CDS 40.0%
GTTCTCATATTCCAGACTCT+TGG + Chr2:21090604-21090623 MsG0280007814.01.T01:intron 40.0%
TATCCTAAGCGAGATGATGA+AGG - Chr2:21090044-21090063 None:intergenic 40.0%
TATTCAGCAGTAGCAAGAAG+TGG - Chr2:21096182-21096201 None:intergenic 40.0%
TATTGGCGCTTGTATTGCAA+TGG - Chr2:21092162-21092181 None:intergenic 40.0%
TCAACAGACACTCTCTGTTT+CGG - Chr2:21091999-21092018 None:intergenic 40.0%
TCAATCATATGCTTCAGCTG+GGG - Chr2:21096373-21096392 None:intergenic 40.0%
TCCATTCTCACAGATGTCAA+CGG + Chr2:21094097-21094116 MsG0280007814.01.T01:CDS 40.0%
TCCTCAAATGTGGATTTCGT+TGG + Chr2:21093337-21093356 MsG0280007814.01.T01:intron 40.0%
TGAATGGTGTGTTCTGTTAG+TGG + Chr2:21092994-21093013 MsG0280007814.01.T01:intron 40.0%
TGATGCAAATAAAGGTGGTG+TGG + Chr2:21094044-21094063 MsG0280007814.01.T01:CDS 40.0%
TGATTTGACTGACATGAAGG+AGG - Chr2:21094698-21094717 None:intergenic 40.0%
TGGTCTCCTCTTATTCTAAG+TGG + Chr2:21096952-21096971 MsG0280007814.01.T01:intron 40.0%
TGTAGGTTCCAACTTCTTTG+TGG - Chr2:21094906-21094925 None:intergenic 40.0%
TGTCGAGATAGAGTTGAAAG+AGG - Chr2:21089987-21090006 None:intergenic 40.0%
TGTTCCTTCATCTTCTCCAA+CGG - Chr2:21096032-21096051 None:intergenic 40.0%
TTGAGGTTCCTCTAAGTTTG+TGG + Chr2:21094522-21094541 MsG0280007814.01.T01:intron 40.0%
TTTCCTTCATCATCTCGCTT+AGG + Chr2:21090038-21090057 MsG0280007814.01.T01:intron 40.0%
! CAAAGCATTTGGCTTCTTGT+AGG - Chr2:21095119-21095138 None:intergenic 40.0%
! CAATTTGACTAATGGTGGTG+AGG - Chr2:21090259-21090278 None:intergenic 40.0%
! CAGTTTGCTCTTTCTGTTCA+TGG + Chr2:21095788-21095807 MsG0280007814.01.T01:intron 40.0%
! GCATATATGCTCCAGTTTTC+CGG - Chr2:21096131-21096150 None:intergenic 40.0%
! TGAGTCTGAAATTGGTACCA+AGG + Chr2:21092301-21092320 MsG0280007814.01.T01:intron 40.0%
! TTTACCTTCAGAGTATCACC+AGG - Chr2:21094759-21094778 None:intergenic 40.0%
! TTTTGGTCTCCACATGAATG+AGG - Chr2:21093107-21093126 None:intergenic 40.0%
!! AGAGGATGATGGATTTGTCA+CGG - Chr2:21095631-21095650 None:intergenic 40.0%
!! AGGGCGTCTTTGTTGTTTAT+GGG - Chr2:21092129-21092148 None:intergenic 40.0%
!! CGAATACAAGCGTTGGATTA+CGG - Chr2:21094943-21094962 None:intergenic 40.0%
!! CTGGTTTGGTTTCAGGTTAA+GGG + Chr2:21093544-21093563 MsG0280007814.01.T01:intron 40.0%
!! GAAATTTGATGGGCTGGTAA+AGG - Chr2:21091206-21091225 None:intergenic 40.0%
!! GACTGATTTGACTGACATGA+AGG - Chr2:21094701-21094720 None:intergenic 40.0%
!! GTGTGTTCTGTTAGTGGATT+TGG + Chr2:21093000-21093019 MsG0280007814.01.T01:intron 40.0%
!! GTTGTTGTTGTTTCCATAGG+AGG - Chr2:21092101-21092120 None:intergenic 40.0%
!! TGTTGTTGTTTCCATAGGAG+GGG - Chr2:21092099-21092118 None:intergenic 40.0%
!!! GGGAAAGAGTTTTGAGTTGT+TGG - Chr2:21094453-21094472 None:intergenic 40.0%
AAGAAGTTGGAACCTACACC+TGG + Chr2:21094908-21094927 MsG0280007814.01.T01:CDS 45.0%
AAGCAGAGACAGAGAGAGAT+TGG + Chr2:21092024-21092043 MsG0280007814.01.T01:intron 45.0%
AAGCAGCAGCAATGGATCAA+AGG + Chr2:21095395-21095414 MsG0280007814.01.T01:intron 45.0%
AAGTCCGTTGGAGAAGATGA+AGG + Chr2:21096025-21096044 MsG0280007814.01.T01:intron 45.0%
ACCGTTGACATCTGTGAGAA+TGG - Chr2:21094101-21094120 None:intergenic 45.0%
ACCTTCTCGAATACAAGCGT+TGG - Chr2:21094950-21094969 None:intergenic 45.0%
AGAAAGAGCAAACTGACCGT+CGG - Chr2:21095783-21095802 None:intergenic 45.0%
AGATGCTGTTGTCAAGGGTA+AGG + Chr2:21093810-21093829 MsG0280007814.01.T01:intron 45.0%
AGCAGAAGATGCTGTTGTCA+AGG + Chr2:21093804-21093823 MsG0280007814.01.T01:CDS 45.0%
AGGAATCGATCAGTTGTCAC+CGG + Chr2:21094615-21094634 MsG0280007814.01.T01:intron 45.0%
AGGTTCCTCTAAGTTTGTGG+AGG + Chr2:21094525-21094544 MsG0280007814.01.T01:intron 45.0%
ATATGCTTAGGTTCAGCCAG+AGG + Chr2:21095325-21095344 MsG0280007814.01.T01:CDS 45.0%
ATCCTGAACAACATCCTCCT+TGG - Chr2:21095748-21095767 None:intergenic 45.0%
CAATCATATGCTTCAGCTGG+GGG - Chr2:21096372-21096391 None:intergenic 45.0%
CCAGCTGAAGCATATGATTG+AGG + Chr2:21096372-21096391 MsG0280007814.01.T01:intron 45.0%
CCTCAATCATATGCTTCAGC+TGG - Chr2:21096375-21096394 None:intergenic 45.0%
CGTTGAGAGATGAAGAAACG+TGG - Chr2:21095574-21095593 None:intergenic 45.0%
CTTTCTCCATCGATAACCGT+AGG + Chr2:21095895-21095914 MsG0280007814.01.T01:intron 45.0%
GAATCCACTTAGCAACGATG+AGG - Chr2:21097073-21097092 None:intergenic 45.0%
GAGACAGAGAGAGATTGGTA+TGG + Chr2:21092029-21092048 MsG0280007814.01.T01:intron 45.0%
GCAGAAGATGCTGTTGTCAA+GGG + Chr2:21093805-21093824 MsG0280007814.01.T01:CDS 45.0%
GGATTACGGATCATATCTCC+AGG - Chr2:21094929-21094948 None:intergenic 45.0%
GGCTGAAGTTGAAGCCTTAA+GGG + Chr2:21094068-21094087 MsG0280007814.01.T01:CDS 45.0%
TAAAGCAAGCACCAAGAGTC+TGG - Chr2:21090618-21090637 None:intergenic 45.0%
TACCAAGGAGGATGTTGTTC+AGG + Chr2:21095743-21095762 MsG0280007814.01.T01:intron 45.0%
TCAACCTGGTGATACTCTGA+AGG + Chr2:21094752-21094771 MsG0280007814.01.T01:CDS 45.0%
TCAACTGATCTATGCTCACG+AGG - Chr2:21091432-21091451 None:intergenic 45.0%
TCATGGGACTGAATGTGGAT+GGG - Chr2:21095600-21095619 None:intergenic 45.0%
TCCAACGCTTGTATTCGAGA+AGG + Chr2:21094946-21094965 MsG0280007814.01.T01:CDS 45.0%
TCCTAGTTGTCCTTGAATGC+CGG - Chr2:21094599-21094618 None:intergenic 45.0%
TGCAAATAAAGGTGGTGTGG+TGG + Chr2:21094047-21094066 MsG0280007814.01.T01:CDS 45.0%
TGCTCTTTCTGTTCATGGGA+CGG + Chr2:21095793-21095812 MsG0280007814.01.T01:intron 45.0%
TGCTGAGAGTTAATCCACTC+TGG - Chr2:21096285-21096304 None:intergenic 45.0%
TGGAGAAGATGAAGGAACAC+TGG + Chr2:21096033-21096052 MsG0280007814.01.T01:intron 45.0%
TGGCTGAAGTTGAAGCCTTA+AGG + Chr2:21094067-21094086 MsG0280007814.01.T01:CDS 45.0%
TGTAGAACAGGCATAGTTCC+TGG + Chr2:21093669-21093688 MsG0280007814.01.T01:intron 45.0%
TTCATGGGACTGAATGTGGA+TGG - Chr2:21095601-21095620 None:intergenic 45.0%
TTCCTCTAAGTTTGTGGAGG+TGG + Chr2:21094528-21094547 MsG0280007814.01.T01:intron 45.0%
TTTCTTATAGGCGGAGGAGA+TGG + Chr2:21095251-21095270 MsG0280007814.01.T01:intron 45.0%
! AGTTGAAAGAGGGAGCACAA+TGG - Chr2:21089976-21089995 None:intergenic 45.0%
! CGGGGTGTTCGAAATTTGAT+GGG - Chr2:21091216-21091235 None:intergenic 45.0%
! CTTTGGTGTGACCAACGAAT+CGG - Chr2:21095860-21095879 None:intergenic 45.0%
! GTGTTCGAAATTTGATGGGC+TGG - Chr2:21091212-21091231 None:intergenic 45.0%
! GTTGAAAGAGGGAGCACAAT+GGG - Chr2:21089975-21089994 None:intergenic 45.0%
! TTTTAGGCTTTGCACAGTGC+CGG - Chr2:21094637-21094656 None:intergenic 45.0%
!! ACTCTTGCTGGTTTGGTTTC+AGG + Chr2:21093537-21093556 MsG0280007814.01.T01:intron 45.0%
!! AGAGGATGATGGATTTGTCG+CGG - Chr2:21095716-21095735 None:intergenic 45.0%
!! ATGATGGATTTGTCACGGGA+GGG - Chr2:21095626-21095645 None:intergenic 45.0%
!! CAGGGCGTCTTTGTTGTTTA+TGG - Chr2:21092130-21092149 None:intergenic 45.0%
!! GAAACAGAGAGTGTCTGTTG+AGG + Chr2:21091998-21092017 MsG0280007814.01.T01:intron 45.0%
!! GAGGATGATGGATTTGTCAC+GGG - Chr2:21095630-21095649 None:intergenic 45.0%
!! GCTGGTTTGGTTTCAGGTTA+AGG + Chr2:21093543-21093562 MsG0280007814.01.T01:intron 45.0%
!!! CGAAGGCACCATATGGTTTT+AGG - Chr2:21094653-21094672 None:intergenic 45.0%
AAAGAGCAAACTGACCGTCG+GGG - Chr2:21095781-21095800 None:intergenic 50.0%
AAGCATATCAGCACGAGCCA+TGG - Chr2:21095313-21095332 None:intergenic 50.0%
AAGTGATTGGCGACTCTTGC+TGG + Chr2:21093525-21093544 MsG0280007814.01.T01:intron 50.0%
AATAGCGCAAGCAGAAGCCA+TGG + Chr2:21095293-21095312 MsG0280007814.01.T01:CDS 50.0%
ACACGACCTACGGTTATCGA+TGG - Chr2:21095904-21095923 None:intergenic 50.0%
ACGATGTCGTACTGCTCCAA+TGG + Chr2:21092224-21092243 MsG0280007814.01.T01:intron 50.0%
AGCGACAGAGAAAGCGACTT+TGG - Chr2:21095877-21095896 None:intergenic 50.0%
AGGCGAGCCTCTACAAACTT+AGG + Chr2:21093644-21093663 MsG0280007814.01.T01:intron 50.0%
ATATCCAGGCTGAGCTTGCA+TGG + Chr2:21093760-21093779 MsG0280007814.01.T01:intron 50.0%
ATTTGCCACGTGTCACGCAT+CGG + Chr2:21096098-21096117 MsG0280007814.01.T01:intron 50.0%
ATTTGCCACGTGTCACGCAT+CGG - Chr2:21096117-21096098 None:intergenic 50.0%
CATCCTCTGGCATCTTACCA+AGG + Chr2:21095728-21095747 MsG0280007814.01.T01:intron 50.0%
CGGATCATATCTCCAGGTGT+AGG - Chr2:21094923-21094942 None:intergenic 50.0%
CGGTGAAGCAAACGGAAAAC+TGG - Chr2:21095489-21095508 None:intergenic 50.0%
CGTCTCTTGTATCTCAACGC+TGG + Chr2:21095823-21095842 MsG0280007814.01.T01:intron 50.0%
CTCGACAACAGTCTCAGTCA+CGG + Chr2:21090000-21090019 MsG0280007814.01.T01:CDS 50.0%
GAAAGAGCAAACTGACCGTC+GGG - Chr2:21095782-21095801 None:intergenic 50.0%
GAGAGAGATTGGTATGGCCA+TGG + Chr2:21092035-21092054 MsG0280007814.01.T01:intron 50.0%
GAGTCTTTCGGGAGTGAGAA+CGG + Chr2:21092846-21092865 MsG0280007814.01.T01:intron 50.0%
GATTAACTCTCAGCAGCGAC+GGG + Chr2:21096290-21096309 MsG0280007814.01.T01:intron 50.0%
GATTCCACCAATGTCGACGA+AGG - Chr2:21094670-21094689 None:intergenic 50.0%
GCGACAAATCCATCATCCTC+TGG + Chr2:21095715-21095734 MsG0280007814.01.T01:intron 50.0%
GGATTAACTCTCAGCAGCGA+CGG + Chr2:21096289-21096308 MsG0280007814.01.T01:intron 50.0%
GGGATTCATGGGACTGAATG+TGG - Chr2:21095605-21095624 None:intergenic 50.0%
GGTAAGATGCCAGAGGATGA+TGG - Chr2:21095727-21095746 None:intergenic 50.0%
GTCCACCTCCACAAACTTAG+AGG - Chr2:21094533-21094552 None:intergenic 50.0%
GTCGACATTGGTGGAATCAG+TGG + Chr2:21094672-21094691 MsG0280007814.01.T01:CDS 50.0%
GTCTCCTCATCGTTGCTAAG+TGG + Chr2:21097066-21097085 MsG0280007814.01.T01:CDS 50.0%
TAAGTTTGTGGAGGTGGACC+AGG + Chr2:21094534-21094553 MsG0280007814.01.T01:intron 50.0%
TATCCAGGCTGAGCTTGCAT+GGG + Chr2:21093761-21093780 MsG0280007814.01.T01:intron 50.0%
TATGGTGCCTTCGTCGACAT+TGG + Chr2:21094660-21094679 MsG0280007814.01.T01:CDS 50.0%
TCACTAACACCAGAGAGCTG+TGG - Chr2:21090370-21090389 None:intergenic 50.0%
TCGGTAAGCAACCGGAAAAC+TGG + Chr2:21096117-21096136 MsG0280007814.01.T01:intron 50.0%
TCTCAATGCCGAACTTGAGG+AGG - Chr2:21090724-21090743 None:intergenic 50.0%
TGTCGTACTGCTCCAATGGA+AGG + Chr2:21092228-21092247 MsG0280007814.01.T01:intron 50.0%
TGTGAGTTACCACAGCTCTC+TGG + Chr2:21090358-21090377 MsG0280007814.01.T01:intron 50.0%
TTAAGTCATGACCGGGAGAG+AGG + Chr2:21094866-21094885 MsG0280007814.01.T01:CDS 50.0%
! ATTGGCGACTCTTGCTGGTT+TGG + Chr2:21093530-21093549 MsG0280007814.01.T01:intron 50.0%
! CAAAATGGACTCCCCTCCTA+TGG + Chr2:21092085-21092104 MsG0280007814.01.T01:intron 50.0%
! GCGGGGTGTTCGAAATTTGA+TGG - Chr2:21091217-21091236 None:intergenic 50.0%
! GGGAGTGAGAACGGTCATTT+TGG + Chr2:21092855-21092874 MsG0280007814.01.T01:intron 50.0%
! TCACGCATCGGTGAAGCAAA+CGG - Chr2:21095497-21095516 None:intergenic 50.0%
! TGGCTCGTGCTGATATGCTT+AGG + Chr2:21095313-21095332 MsG0280007814.01.T01:CDS 50.0%
! TTGTCCTTGAATGCCGGCTA+CGG - Chr2:21094593-21094612 None:intergenic 50.0%
!! ATGTCGACGAAGGCACCATA+TGG - Chr2:21094660-21094679 None:intergenic 50.0%
!! CAGGTTAAGGGCACTGTGTT+TGG + Chr2:21093556-21093575 MsG0280007814.01.T01:intron 50.0%
!! GAGGATGATGGATTTGTCGC+GGG - Chr2:21095715-21095734 None:intergenic 50.0%
!! GATGATGGATTTGTCACGGG+AGG - Chr2:21095627-21095646 None:intergenic 50.0%
!! GGATAAGTCTGGCTTGTTCC+TGG - Chr2:21094555-21094574 None:intergenic 50.0%
!! GTGTTTGGCACCGATACTAG+TGG + Chr2:21093571-21093590 MsG0280007814.01.T01:intron 50.0%
!! TGATGGATTTGTCACGGGAG+GGG - Chr2:21095625-21095644 None:intergenic 50.0%
AAAGCCGTAGCCGGCATTCA+AGG + Chr2:21094586-21094605 MsG0280007814.01.T01:intron 55.0%
ACTCAGATCCAGTCCTCTGG+CGG - Chr2:21096343-21096362 None:intergenic 55.0%
AGGCTGAGCTTGCATGGGAA+AGG + Chr2:21093766-21093785 MsG0280007814.01.T01:intron 55.0%
CCTCCTTGGTAAGATGCCAG+AGG - Chr2:21095734-21095753 None:intergenic 55.0%
CCTCTGGCATCTTACCAAGG+AGG + Chr2:21095731-21095750 MsG0280007814.01.T01:intron 55.0%
CGAGAAGCAGACACGACCTA+CGG - Chr2:21095914-21095933 None:intergenic 55.0%
CTCACTCAGATCCAGTCCTC+TGG - Chr2:21096346-21096365 None:intergenic 55.0%
GAACAGCCATGATTGGGGTG+TGG + Chr2:21095949-21095968 MsG0280007814.01.T01:intron 55.0%
GACGGGATCTTAGGACCACT+TGG + Chr2:21096307-21096326 MsG0280007814.01.T01:intron 55.0%
GCCGGCATTCAAGGACAACT+AGG + Chr2:21094595-21094614 MsG0280007814.01.T01:intron 55.0%
GCGGTGGCTAAGGATAAGTC+TGG - Chr2:21094566-21094585 None:intergenic 55.0%
GGATGTTGTTCTCTCCCCGA+CGG + Chr2:21095764-21095783 MsG0280007814.01.T01:intron 55.0%
TGTCACGGGAGGGGATTCAT+GGG - Chr2:21095616-21095635 None:intergenic 55.0%
TTGTCACGGGAGGGGATTCA+TGG - Chr2:21095617-21095636 None:intergenic 55.0%
TTGTTGAGCCACAGACGCCA+TGG - Chr2:21092055-21092074 None:intergenic 55.0%
TTTCCCATGCAAGCTCAGCC+TGG - Chr2:21093767-21093786 None:intergenic 55.0%
! GAGGCGCTCTCACTATAGTC+TGG - Chr2:21093088-21093107 None:intergenic 55.0%
! GTCACGCATCGGTAAGCAAC+CGG + Chr2:21096109-21096128 MsG0280007814.01.T01:intron 55.0%
!! GATGATGGATTTGTCGCGGG+AGG - Chr2:21095712-21095731 None:intergenic 55.0%
!! GTGAGAGCGCCTCATTCATG+TGG + Chr2:21093095-21093114 MsG0280007814.01.T01:intron 55.0%
AGCCATGATTGGGGTGTGGC+CGG + Chr2:21095953-21095972 MsG0280007814.01.T01:intron 60.0%
CTACGGCTTTGCGGTGGCTA+AGG - Chr2:21094576-21094595 None:intergenic 60.0%
CTCAGCAGCGACGGGATCTT+AGG + Chr2:21096298-21096317 MsG0280007814.01.T01:intron 60.0%
CTTCACCGATGCGTGACACG+TGG + Chr2:21095501-21095520 MsG0280007814.01.T01:intron 60.0%
GACTTACACGGCCTCTCTCC+CGG - Chr2:21094880-21094899 None:intergenic 60.0%
GAGGGAGGCAGTCATGAGAG+AGG + Chr2:21095982-21096001 MsG0280007814.01.T01:intron 60.0%
GCTTACCGATGCGTGACACG+TGG - Chr2:21096106-21096125 None:intergenic 60.0%
GGAGGCAGTCATGAGAGAGG+TGG + Chr2:21095985-21096004 MsG0280007814.01.T01:intron 60.0%
GGCAGTCATGAGAGAGGTGG+CGG + Chr2:21095988-21096007 MsG0280007814.01.T01:intron 60.0%
GGCGGCAAGTCTGAACCAAG+TGG - Chr2:21096325-21096344 None:intergenic 60.0%
GGCTTACTTGCCGCTACGAG+AGG + Chr2:21093624-21093643 MsG0280007814.01.T01:intron 60.0%
GGTGCCTTCGTCGACATTGG+TGG + Chr2:21094663-21094682 MsG0280007814.01.T01:CDS 60.0%
GGTGGCTGGGGTTTGAATCC+CGG - Chr2:21091483-21091502 None:intergenic 60.0%
GTGACCAACGAATCGGCGAG+CGG - Chr2:21095853-21095872 None:intergenic 60.0%
TAGAGGCTCGCCTCTCGTAG+CGG - Chr2:21093637-21093656 None:intergenic 60.0%
TCGTAGCGGCAAGTAAGCCG+TGG - Chr2:21093623-21093642 None:intergenic 60.0%
TGGTATGGCCATGGCGTCTG+TGG + Chr2:21092044-21092063 MsG0280007814.01.T01:intron 60.0%
TGGTTCAGACTTGCCGCCAG+AGG + Chr2:21096327-21096346 MsG0280007814.01.T01:intron 60.0%
! GAATGCCGGCTACGGCTTTG+CGG - Chr2:21094585-21094604 None:intergenic 60.0%
!! AACTCCGCTCGCCGATTCGT+TGG + Chr2:21095846-21095865 MsG0280007814.01.T01:intron 60.0%
AGCCACCGCAAAGCCGTAGC+CGG + Chr2:21094577-21094596 MsG0280007814.01.T01:intron 65.0%
ATTGGGGTGTGGCCGGAGTG+GGG + Chr2:21095960-21095979 MsG0280007814.01.T01:intron 65.0%
CAGACTTGCCGCCAGAGGAC+TGG + Chr2:21096332-21096351 MsG0280007814.01.T01:intron 65.0%
CTCCGGCCACACCCCAATCA+TGG - Chr2:21095958-21095977 None:intergenic 65.0%
GATTGGGGTGTGGCCGGAGT+GGG + Chr2:21095959-21095978 MsG0280007814.01.T01:intron 65.0%
TGATTGGGGTGTGGCCGGAG+TGG + Chr2:21095958-21095977 MsG0280007814.01.T01:intron 65.0%
GACTGCCTCCCTCCCCACTC+CGG - Chr2:21095975-21095994 None:intergenic 70.0%
! TGCCGGCTACGGCTTTGCGG+TGG - Chr2:21094582-21094601 None:intergenic 70.0%
GGGTGTGGCCGGAGTGGGGA+GGG + Chr2:21095964-21095983 MsG0280007814.01.T01:intron 75.0%
TGTGGCCGGAGTGGGGAGGG+AGG + Chr2:21095967-21095986 MsG0280007814.01.T01:intron 75.0%
! GGGGTGTGGCCGGAGTGGGG+AGG + Chr2:21095963-21095982 MsG0280007814.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr2 gene 21089921 21097101 21089921 ID=MsG0280007814.01;Name=MsG0280007814.01
Chr2 mRNA 21089921 21097101 21089921 ID=MsG0280007814.01.T01;Parent=MsG0280007814.01;Name=MsG0280007814.01.T01;_AED=0.50;_eAED=0.65;_QI=0|0.33|0.42|1|1|1|7|0|233
Chr2 exon 21089921 21090021 21089921 ID=MsG0280007814.01.T01:exon:4946;Parent=MsG0280007814.01.T01
Chr2 exon 21093768 21093826 21093768 ID=MsG0280007814.01.T01:exon:4947;Parent=MsG0280007814.01.T01
Chr2 exon 21094040 21094118 21094040 ID=MsG0280007814.01.T01:exon:4948;Parent=MsG0280007814.01.T01
Chr2 exon 21094617 21094773 21094617 ID=MsG0280007814.01.T01:exon:4949;Parent=MsG0280007814.01.T01
Chr2 exon 21094857 21094967 21094857 ID=MsG0280007814.01.T01:exon:4950;Parent=MsG0280007814.01.T01
Chr2 exon 21095261 21095346 21095261 ID=MsG0280007814.01.T01:exon:4951;Parent=MsG0280007814.01.T01
Chr2 exon 21096993 21097101 21096993 ID=MsG0280007814.01.T01:exon:4952;Parent=MsG0280007814.01.T01
Chr2 CDS 21089921 21090021 21089921 ID=MsG0280007814.01.T01:cds;Parent=MsG0280007814.01.T01
Chr2 CDS 21093768 21093826 21093768 ID=MsG0280007814.01.T01:cds;Parent=MsG0280007814.01.T01
Chr2 CDS 21094040 21094118 21094040 ID=MsG0280007814.01.T01:cds;Parent=MsG0280007814.01.T01
Chr2 CDS 21094617 21094773 21094617 ID=MsG0280007814.01.T01:cds;Parent=MsG0280007814.01.T01
Chr2 CDS 21094857 21094967 21094857 ID=MsG0280007814.01.T01:cds;Parent=MsG0280007814.01.T01
Chr2 CDS 21095261 21095346 21095261 ID=MsG0280007814.01.T01:cds;Parent=MsG0280007814.01.T01
Chr2 CDS 21096993 21097101 21096993 ID=MsG0280007814.01.T01:cds;Parent=MsG0280007814.01.T01
Gene Sequence

>MsG0280007814.01.T01

ATGTATTCATCTCCACAAGTTGATAGTGAGTTGAAAATTCTGAACATGTATCCCATTGTGCTCCCTCTTTCAACTCTATCTCGACAACAGTCTCAGTCACGGCTGAGCTTGCATGGGAAAGGTTGTAGACAACTTCAAGCAGAAGATGCTGTTGTCAAGGATTATGATGCAAATAAAGGTGGTGTGGTGGCTGAAGTTGAAGCCTTAAGGGATTTGTTCCATTCTCACAGATGTCAACGGAATCGATCAGTTGTCACCGGCACTGTGCAAAGCCTAAAACCATATGGTGCCTTCGTCGACATTGGTGGAATCAGTGGCCTCCTTCATGTCAGTCAAATCAGTCACGATCGTATATCAGATATTGCAACTGTTCTTCAACCTGGTGATACTCTGAAGGTGATGATCTTAAGTCATGACCGGGAGAGAGGCCGTGTAAGTCTTTCCACAAAGAAGTTGGAACCTACACCTGGAGATATGATCCGTAATCCAACGCTTGTATTCGAGAAGGCGGAGGAGATGGCTCAGACATTCAGACAGAGAATAGCGCAAGCAGAAGCCATGGCTCGTGCTGATATGCTTAGGTTCAGCCAGAGGAATCCTCATCGAATGGTAATGTTGATGAGGAATCCACTTGATATGTTGTATATTAACAAGATTAAGTTGCAGGTCTCCTCATCGTTGCTAAGTGGATTCATGACGTAG

Protein sequence

>MsG0280007814.01.T01

MYSSPQVDSELKILNMYPIVLPLSTLSRQQSQSRLSLHGKGCRQLQAEDAVVKDYDANKGGVVAEVEALRDLFHSHRCQRNRSVVTGTVQSLKPYGAFVDIGGISGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVFEKAEEMAQTFRQRIAQAEAMARADMLRFSQRNPHRMVMLMRNPLDMLYINKIKLQVSSSLLSGFMT*