Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034320.01.T01 | PNY11535.1 | 75.983 | 229 | 20 | 3 | 17 | 210 | 41 | 269 | 4.91E-115 | 342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034320.01.T01 | Q945S8 | 63.291 | 237 | 46 | 5 | 21 | 216 | 49 | 285 | 1.25E-81 | 250 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034320.01.T01 | G7KMG0 | 80.995 | 221 | 15 | 2 | 17 | 210 | 44 | 264 | 7.74e-123 | 360 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048152.01 | MsG0680034320.01 | 0.804770 | 1.841674e-49 | 9.577766e-47 |
| MsG0080048404.01 | MsG0680034320.01 | 0.809685 | 1.674925e-50 | 9.898904e-48 |
| MsG0080048856.01 | MsG0680034320.01 | 0.824596 | 7.407499e-54 | 6.592097e-51 |
| MsG0180000139.01 | MsG0680034320.01 | 0.817205 | 3.720389e-52 | 2.692109e-49 |
| MsG0180000145.01 | MsG0680034320.01 | 0.858815 | 6.355656e-63 | 1.642989e-59 |
| MsG0180000209.01 | MsG0680034320.01 | 0.801494 | 8.769492e-49 | 4.193959e-46 |
| MsG0180000210.01 | MsG0680034320.01 | 0.800517 | 1.389072e-48 | 6.480773e-46 |
| MsG0180000470.01 | MsG0680034320.01 | 0.830407 | 2.988834e-55 | 3.146117e-52 |
| MsG0180000584.01 | MsG0680034320.01 | 0.802915 | 4.473199e-49 | 2.217996e-46 |
| MsG0180000835.01 | MsG0680034320.01 | 0.835846 | 1.322770e-56 | 1.637436e-53 |
| MsG0180000836.01 | MsG0680034320.01 | 0.817806 | 2.724106e-52 | 2.004021e-49 |
| MsG0180001173.01 | MsG0680034320.01 | 0.804879 | 1.747716e-49 | 9.115372e-47 |
| MsG0180001892.01 | MsG0680034320.01 | 0.811066 | 8.430629e-51 | 5.167706e-48 |
| MsG0180002547.01 | MsG0680034320.01 | 0.810956 | 8.905778e-51 | 5.443555e-48 |
| MsG0180002794.01 | MsG0680034320.01 | 0.811718 | 6.085211e-51 | 3.794703e-48 |
| MsG0180003773.01 | MsG0680034320.01 | 0.828881 | 7.025634e-55 | 7.072947e-52 |
| MsG0180003951.01 | MsG0680034320.01 | 0.803380 | 3.583481e-49 | 1.798060e-46 |
| MsG0180004062.01 | MsG0680034320.01 | 0.809440 | 1.890065e-50 | 1.109785e-47 |
| MsG0180004152.01 | MsG0680034320.01 | 0.801787 | 7.635987e-49 | 3.678987e-46 |
| MsG0180004389.01 | MsG0680034320.01 | 0.841309 | 5.138332e-58 | 7.519086e-55 |
| MsG0180004463.01 | MsG0680034320.01 | 0.848958 | 4.397178e-60 | 8.207689e-57 |
| MsG0180004465.01 | MsG0680034320.01 | 0.809380 | 1.947378e-50 | 1.141628e-47 |
| MsG0180004482.01 | MsG0680034320.01 | 0.800043 | 1.734252e-48 | 7.994512e-46 |
| MsG0180004765.01 | MsG0680034320.01 | 0.805461 | 1.320362e-49 | 6.989705e-47 |
| MsG0180004928.01 | MsG0680034320.01 | 0.800613 | 1.327568e-48 | 6.209046e-46 |
| MsG0180004975.01 | MsG0680034320.01 | 0.800914 | 1.152308e-48 | 5.430960e-46 |
| MsG0180005250.01 | MsG0680034320.01 | 0.819930 | 8.964737e-53 | 6.994298e-50 |
| MsG0180005575.01 | MsG0680034320.01 | 0.812169 | 4.852586e-51 | 3.063111e-48 |
| MsG0280006299.01 | MsG0680034320.01 | 0.814429 | 1.548022e-51 | 1.038466e-48 |
| MsG0280006405.01 | MsG0680034320.01 | 0.805393 | 1.363967e-49 | 7.207695e-47 |
| MsG0280010722.01 | MsG0680034320.01 | 0.824990 | 5.981187e-54 | 5.383032e-51 |
| MsG0280010778.01 | MsG0680034320.01 | 0.843740 | 1.163365e-58 | 1.837529e-55 |
| MsG0280011014.01 | MsG0680034320.01 | 0.805206 | 1.493153e-49 | 7.852579e-47 |
| MsG0280011101.01 | MsG0680034320.01 | 0.814622 | 1.402815e-51 | 9.459671e-49 |
| MsG0280011109.01 | MsG0680034320.01 | 0.803747 | 3.007378e-49 | 1.523328e-46 |
| MsG0280011339.01 | MsG0680034320.01 | 0.829116 | 6.163889e-55 | 6.248984e-52 |
| MsG0280011341.01 | MsG0680034320.01 | 0.823494 | 1.344310e-53 | 1.159354e-50 |
| MsG0280011416.01 | MsG0680034320.01 | 0.828758 | 7.525806e-55 | 7.549521e-52 |
| MsG0380011581.01 | MsG0680034320.01 | 0.804193 | 2.429416e-49 | 1.244718e-46 |
| MsG0380012067.01 | MsG0680034320.01 | 0.801949 | 7.072126e-49 | 3.421338e-46 |
| MsG0380012103.01 | MsG0680034320.01 | 0.810639 | 1.042819e-50 | 6.319801e-48 |
| MsG0380012460.01 | MsG0680034320.01 | 0.833867 | 4.165915e-56 | 4.860095e-53 |
| MsG0380013178.01 | MsG0680034320.01 | 0.820613 | 6.253560e-53 | 4.971765e-50 |
| MsG0380013183.01 | MsG0680034320.01 | 0.826138 | 3.197064e-54 | 2.972803e-51 |
| MsG0380013363.01 | MsG0680034320.01 | 0.828912 | 6.904810e-55 | 6.957944e-52 |
| MsG0380013475.01 | MsG0680034320.01 | 0.836871 | 7.257700e-57 | 9.266498e-54 |
| MsG0380013549.01 | MsG0680034320.01 | 0.831873 | 1.304241e-55 | 1.433901e-52 |
| MsG0380013834.01 | MsG0680034320.01 | 0.811653 | 6.288060e-51 | 3.914165e-48 |
| MsG0380014468.01 | MsG0680034320.01 | 0.809328 | 1.997690e-50 | 1.169488e-47 |
| MsG0380014537.01 | MsG0680034320.01 | 0.813409 | 2.597074e-51 | 1.694733e-48 |
| MsG0380014701.01 | MsG0680034320.01 | 0.806929 | 6.479510e-50 | 3.561523e-47 |
| MsG0380014875.01 | MsG0680034320.01 | 0.800103 | 1.686359e-48 | 7.785541e-46 |
| MsG0680030880.01 | MsG0680034320.01 | 0.823607 | 1.264916e-53 | 1.094327e-50 |
| MsG0680030881.01 | MsG0680034320.01 | 0.810885 | 9.227273e-51 | 5.629163e-48 |
| MsG0680030882.01 | MsG0680034320.01 | 0.805263 | 1.452363e-49 | 7.648986e-47 |
| MsG0680031214.01 | MsG0680034320.01 | 0.819379 | 1.198073e-52 | 9.203520e-50 |
| MsG0680031262.01 | MsG0680034320.01 | 0.816303 | 5.927129e-52 | 4.184737e-49 |
| MsG0680031360.01 | MsG0680034320.01 | 0.803502 | 3.381756e-49 | 1.702240e-46 |
| MsG0680031431.01 | MsG0680034320.01 | 0.810984 | 8.782027e-51 | 5.372092e-48 |
| MsG0680031488.01 | MsG0680034320.01 | 0.842353 | 2.722778e-58 | 4.117676e-55 |
| MsG0680031506.01 | MsG0680034320.01 | 0.827814 | 1.271132e-54 | 1.240556e-51 |
| MsG0680031617.01 | MsG0680034320.01 | 0.801483 | 8.816831e-49 | 4.215380e-46 |
| MsG0680032771.01 | MsG0680034320.01 | 0.803645 | 3.157874e-49 | 1.595356e-46 |
| MsG0680033412.01 | MsG0680034320.01 | 0.806500 | 7.983095e-50 | 4.339803e-47 |
| MsG0680034320.01 | MsG0680034739.01 | 0.814555 | 1.451658e-51 | 9.771468e-49 |
| MsG0680034320.01 | MsG0680035306.01 | 0.813342 | 2.686633e-51 | 1.749955e-48 |
| MsG0680034320.01 | MsG0680035346.01 | 0.803965 | 2.709377e-49 | 1.380132e-46 |
| MsG0680034320.01 | MsG0680035475.01 | 0.818543 | 1.855783e-52 | 1.393184e-49 |
| MsG0680034320.01 | MsG0680035876.01 | 0.843755 | 1.152580e-58 | 1.821362e-55 |
| MsG0680034320.01 | MsG0780036018.01 | 0.801891 | 7.270623e-49 | 3.512373e-46 |
| MsG0680034320.01 | MsG0780036340.01 | 0.812040 | 5.178374e-51 | 3.257004e-48 |
| MsG0680034320.01 | MsG0780036477.01 | 0.810747 | 9.881992e-51 | 6.006250e-48 |
| MsG0680034320.01 | MsG0780037054.01 | 0.809787 | 1.592346e-50 | 9.436378e-48 |
| MsG0680034320.01 | MsG0780038401.01 | 0.825425 | 4.719597e-54 | 4.300095e-51 |
| MsG0680034320.01 | MsG0780038439.01 | 0.822826 | 1.924461e-53 | 1.628714e-50 |
| MsG0680034320.01 | MsG0780038603.01 | 0.818239 | 2.174163e-52 | 1.618436e-49 |
| MsG0680034320.01 | MsG0780039170.01 | 0.842335 | 2.754348e-58 | 4.162790e-55 |
| MsG0680034320.01 | MsG0780039243.01 | 0.806271 | 8.921761e-50 | 4.822132e-47 |
| MsG0680034320.01 | MsG0780039443.01 | 0.834608 | 2.715896e-56 | 3.239519e-53 |
| MsG0680034320.01 | MsG0780039520.01 | 0.820220 | 7.696079e-53 | 6.052725e-50 |
| MsG0680034320.01 | MsG0780039866.01 | 0.825485 | 4.568126e-54 | 4.169257e-51 |
| MsG0680034320.01 | MsG0780040057.01 | 0.862723 | 4.140489e-64 | 1.224798e-60 |
| MsG0680034320.01 | MsG0780040529.01 | 0.808093 | 3.669275e-50 | 2.079040e-47 |
| MsG0680034320.01 | MsG0780040669.01 | 0.810886 | 9.224520e-51 | 5.627600e-48 |
| MsG0680034320.01 | MsG0780041016.01 | 0.808399 | 3.156442e-50 | 1.803017e-47 |
| MsG0680034320.01 | MsG0780041229.01 | 0.802719 | 4.908317e-49 | 2.421699e-46 |
| MsG0680034320.01 | MsG0780041305.01 | 0.824201 | 9.178446e-54 | 8.075049e-51 |
| MsG0680034320.01 | MsG0780041456.01 | 0.827689 | 1.361457e-54 | 1.323904e-51 |
| MsG0680034320.01 | MsG0880042518.01 | 0.814101 | 1.828600e-51 | 1.215783e-48 |
| MsG0680034320.01 | MsG0880042519.01 | 0.801793 | 7.614063e-49 | 3.669007e-46 |
| MsG0680034320.01 | MsG0880042760.01 | 0.810318 | 1.223399e-50 | 7.351018e-48 |
| MsG0680034320.01 | MsG0880043454.01 | 0.809054 | 2.287561e-50 | 1.329357e-47 |
| MsG0680034320.01 | MsG0880044248.01 | 0.803822 | 2.902397e-49 | 1.472981e-46 |
| MsG0680034320.01 | MsG0880044565.01 | 0.807174 | 5.750387e-50 | 3.180972e-47 |
| MsG0680034320.01 | MsG0880044574.01 | 0.820434 | 6.873786e-53 | 5.438393e-50 |
| MsG0680034320.01 | MsG0880044728.01 | 0.818805 | 1.617825e-52 | 1.223292e-49 |
| MsG0680034320.01 | MsG0880044782.01 | 0.819567 | 1.085443e-52 | 8.383008e-50 |
| MsG0680034320.01 | MsG0880045124.01 | 0.802246 | 6.145214e-49 | 2.995600e-46 |
| MsG0680034320.01 | MsG0880045294.01 | 0.825652 | 4.171600e-54 | 3.825602e-51 |
| MsG0680034320.01 | MsG0880045362.01 | 0.819672 | 1.027276e-52 | 7.956853e-50 |
| MsG0680034320.01 | MsG0880045372.01 | 0.812454 | 4.204920e-51 | 2.674897e-48 |
| MsG0680034320.01 | MsG0880045736.01 | 0.838992 | 2.068322e-57 | 2.817467e-54 |
| MsG0680034320.01 | MsG0880046012.01 | 0.818232 | 2.182023e-52 | 1.623981e-49 |
| MsG0680034320.01 | MsG0880046020.01 | 0.818481 | 1.916544e-52 | 1.436358e-49 |
| MsG0680034320.01 | MsG0880046122.01 | 0.814786 | 1.290012e-51 | 8.737396e-49 |
| MsG0680034320.01 | MsG0880047647.01 | 0.800992 | 1.110772e-48 | 5.245775e-46 |
| MsG0480019206.01 | MsG0680034320.01 | 0.822853 | 1.896803e-53 | 1.606516e-50 |
| MsG0480019297.01 | MsG0680034320.01 | 0.803895 | 2.802035e-49 | 1.424813e-46 |
| MsG0480019350.01 | MsG0680034320.01 | 0.800414 | 1.457477e-48 | 6.782489e-46 |
| MsG0480019409.01 | MsG0680034320.01 | 0.802282 | 6.041583e-49 | 2.947809e-46 |
| MsG0480020739.01 | MsG0680034320.01 | 0.817583 | 3.057858e-52 | 2.235757e-49 |
| MsG0480020836.01 | MsG0680034320.01 | 0.819387 | 1.192705e-52 | 9.164644e-50 |
| MsG0480021056.01 | MsG0680034320.01 | 0.814648 | 1.384320e-51 | 9.341577e-49 |
| MsG0480021465.01 | MsG0680034320.01 | 0.805505 | 1.292076e-49 | 6.847374e-47 |
| MsG0480021491.01 | MsG0680034320.01 | 0.806426 | 8.275584e-50 | 4.490344e-47 |
| MsG0480021724.01 | MsG0680034320.01 | 0.807377 | 5.208005e-50 | 2.896189e-47 |
| MsG0480022045.01 | MsG0680034320.01 | 0.807551 | 4.784055e-50 | 2.672393e-47 |
| MsG0480022164.01 | MsG0680034320.01 | 0.805325 | 1.409430e-49 | 7.435066e-47 |
| MsG0480022222.01 | MsG0680034320.01 | 0.810047 | 1.399477e-50 | 8.350138e-48 |
| MsG0480022855.01 | MsG0680034320.01 | 0.839455 | 1.568230e-57 | 2.166870e-54 |
| MsG0480022985.01 | MsG0680034320.01 | 0.811087 | 8.342809e-51 | 5.116731e-48 |
| MsG0480023145.01 | MsG0680034320.01 | 0.800110 | 1.680923e-48 | 7.761752e-46 |
| MsG0480023221.01 | MsG0680034320.01 | 0.808235 | 3.421433e-50 | 1.945958e-47 |
| MsG0480023354.01 | MsG0680034320.01 | 0.822974 | 1.777626e-53 | 1.510699e-50 |
| MsG0480023463.01 | MsG0680034320.01 | 0.860050 | 2.705192e-63 | 7.297843e-60 |
| MsG0480023600.01 | MsG0680034320.01 | 0.814414 | 1.559480e-51 | 1.045790e-48 |
| MsG0580024038.01 | MsG0680034320.01 | 0.813721 | 2.217320e-51 | 1.459219e-48 |
| MsG0580024197.01 | MsG0680034320.01 | 0.821529 | 3.846534e-53 | 3.137258e-50 |
| MsG0580024544.01 | MsG0680034320.01 | 0.830219 | 3.321423e-55 | 3.477487e-52 |
| MsG0580024781.01 | MsG0680034320.01 | 0.807139 | 5.848330e-50 | 3.232088e-47 |
| MsG0580025135.01 | MsG0680034320.01 | 0.811312 | 7.455697e-51 | 4.599587e-48 |
| MsG0580025651.01 | MsG0680034320.01 | 0.808249 | 3.397625e-50 | 1.933184e-47 |
| MsG0380014948.01 | MsG0680034320.01 | 0.807185 | 5.718686e-50 | 3.164360e-47 |
| MsG0380015332.01 | MsG0680034320.01 | 0.863474 | 2.426649e-64 | 7.364678e-61 |
| MsG0380015440.01 | MsG0680034320.01 | 0.810220 | 1.284569e-50 | 7.698428e-48 |
| MsG0380015555.01 | MsG0680034320.01 | 0.834273 | 3.297067e-56 | 3.893526e-53 |
| MsG0380015677.01 | MsG0680034320.01 | 0.826993 | 1.999586e-54 | 1.905451e-51 |
| MsG0380015808.01 | MsG0680034320.01 | 0.800520 | 1.386612e-48 | 6.469918e-46 |
| MsG0380015953.01 | MsG0680034320.01 | 0.800675 | 1.289319e-48 | 6.039740e-46 |
| MsG0380016126.01 | MsG0680034320.01 | 0.816019 | 6.859409e-52 | 4.805278e-49 |
| MsG0380016407.01 | MsG0680034320.01 | 0.834000 | 3.860253e-56 | 4.521369e-53 |
| MsG0380016517.01 | MsG0680034320.01 | 0.800827 | 1.200587e-48 | 5.645624e-46 |
| MsG0380016970.01 | MsG0680034320.01 | 0.847624 | 1.028012e-59 | 1.838103e-56 |
| MsG0380017375.01 | MsG0680034320.01 | 0.801056 | 1.078179e-48 | 5.099892e-46 |
| MsG0380017461.01 | MsG0680034320.01 | 0.810024 | 1.415701e-50 | 8.442094e-48 |
| MsG0380017498.01 | MsG0680034320.01 | 0.802885 | 4.535807e-49 | 2.247356e-46 |
| MsG0380017589.01 | MsG0680034320.01 | 0.824043 | 9.993097e-54 | 8.752022e-51 |
| MsG0380017947.01 | MsG0680034320.01 | 0.808801 | 2.590654e-50 | 1.495340e-47 |
| MsG0380018075.01 | MsG0680034320.01 | 0.817183 | 3.763094e-52 | 2.721374e-49 |
| MsG0480018163.01 | MsG0680034320.01 | 0.835696 | 1.443629e-56 | 1.779189e-53 |
| MsG0480018183.01 | MsG0680034320.01 | 0.828348 | 9.450030e-55 | 9.368141e-52 |
| MsG0580026086.01 | MsG0680034320.01 | 0.806429 | 8.261034e-50 | 4.482892e-47 |
| MsG0580026726.01 | MsG0680034320.01 | 0.808782 | 2.614583e-50 | 1.508399e-47 |
| MsG0580027031.01 | MsG0680034320.01 | 0.837236 | 5.855151e-57 | 7.557864e-54 |
| MsG0580027361.01 | MsG0680034320.01 | 0.806935 | 6.459670e-50 | 3.551201e-47 |
| MsG0580027431.01 | MsG0680034320.01 | 0.808177 | 3.520634e-50 | 1.999336e-47 |
| MsG0580028148.01 | MsG0680034320.01 | 0.807650 | 4.556090e-50 | 2.551651e-47 |
| MsG0580029008.01 | MsG0680034320.01 | 0.840081 | 1.077627e-57 | 1.518324e-54 |
| MsG0580029236.01 | MsG0680034320.01 | 0.806789 | 6.935268e-50 | 3.798243e-47 |
| MsG0580029729.01 | MsG0680034320.01 | 0.800612 | 1.328457e-48 | 6.212889e-46 |
| MsG0280006461.01 | MsG0680034320.01 | 0.829367 | 5.357525e-55 | 5.472365e-52 |
| MsG0280006491.01 | MsG0680034320.01 | 0.807849 | 4.134036e-50 | 2.327296e-47 |
| MsG0280006567.01 | MsG0680034320.01 | 0.810767 | 9.787439e-51 | 5.951899e-48 |
| MsG0280006993.01 | MsG0680034320.01 | 0.804363 | 2.239551e-49 | 1.152505e-46 |
| MsG0280007527.01 | MsG0680034320.01 | 0.838544 | 2.699426e-57 | 3.627340e-54 |
| MsG0280007529.01 | MsG0680034320.01 | 0.811156 | 8.060403e-51 | 4.952343e-48 |
| MsG0280007955.01 | MsG0680034320.01 | 0.825659 | 4.154412e-54 | 3.810667e-51 |
| MsG0280008257.01 | MsG0680034320.01 | 0.804471 | 2.126246e-49 | 1.097205e-46 |
| MsG0280008378.01 | MsG0680034320.01 | 0.823999 | 1.023514e-53 | 8.952737e-51 |
| MsG0280009353.01 | MsG0680034320.01 | 0.815716 | 8.014628e-52 | 5.568340e-49 |
| MsG0280009748.01 | MsG0680034320.01 | 0.828824 | 7.253632e-55 | 7.290809e-52 |
| MsG0280009794.01 | MsG0680034320.01 | 0.811874 | 5.628755e-51 | 3.524514e-48 |
| MsG0280010109.01 | MsG0680034320.01 | 0.800881 | 1.170748e-48 | 5.513131e-46 |
| MsG0280010184.01 | MsG0680034320.01 | 0.823806 | 1.135647e-53 | 9.881418e-51 |
| MsG0280010366.01 | MsG0680034320.01 | 0.812004 | 5.272196e-51 | 3.313035e-48 |
| MsG0280010533.01 | MsG0680034320.01 | 0.805086 | 1.581736e-49 | 8.292947e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680034320.01 | MsG0580024188.01 | PPI |
| MsG0780041122.01 | MsG0680034320.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034320.01.T01 | MTR_6g059310 | 80.995 | 221 | 15 | 2 | 17 | 210 | 44 | 264 | 1.96e-126 | 360 |
| MsG0680034320.01.T01 | MTR_6g059310 | 80.543 | 221 | 16 | 2 | 17 | 210 | 44 | 264 | 1.29e-125 | 359 |
| MsG0680034320.01.T01 | MTR_0071s0100 | 41.667 | 216 | 94 | 3 | 17 | 206 | 149 | 358 | 4.36e-49 | 164 |
| MsG0680034320.01.T01 | MTR_1g098370 | 36.500 | 200 | 97 | 4 | 30 | 199 | 41 | 240 | 1.77e-26 | 106 |
| MsG0680034320.01.T01 | MTR_1g098000 | 36.500 | 200 | 97 | 4 | 30 | 199 | 38 | 237 | 2.16e-26 | 105 |
| MsG0680034320.01.T01 | MTR_3g088625 | 43.200 | 125 | 70 | 1 | 50 | 173 | 1183 | 1307 | 2.04e-22 | 95.5 |
| MsG0680034320.01.T01 | MTR_3g088625 | 43.200 | 125 | 70 | 1 | 50 | 173 | 1289 | 1413 | 2.30e-22 | 95.1 |
| MsG0680034320.01.T01 | MTR_5g018850 | 34.868 | 152 | 79 | 3 | 57 | 188 | 1325 | 1476 | 2.52e-17 | 80.5 |
| MsG0680034320.01.T01 | MTR_8g078490 | 37.398 | 123 | 66 | 1 | 57 | 168 | 1071 | 1193 | 3.31e-16 | 77.4 |
| MsG0680034320.01.T01 | MTR_4g132610 | 34.959 | 123 | 69 | 1 | 57 | 168 | 865 | 987 | 1.72e-15 | 75.1 |
| MsG0680034320.01.T01 | MTR_8g078505 | 35.537 | 121 | 69 | 1 | 57 | 168 | 359 | 479 | 8.57e-15 | 72.8 |
| MsG0680034320.01.T01 | MTR_5g013420 | 30.000 | 140 | 76 | 3 | 59 | 176 | 891 | 1030 | 5.47e-13 | 67.8 |
| MsG0680034320.01.T01 | MTR_5g013420 | 30.000 | 140 | 76 | 3 | 59 | 176 | 891 | 1030 | 5.47e-13 | 67.8 |
| MsG0680034320.01.T01 | MTR_3g011440 | 27.703 | 148 | 73 | 2 | 59 | 176 | 461 | 604 | 6.16e-12 | 64.7 |
| MsG0680034320.01.T01 | MTR_4g010830 | 28.571 | 140 | 78 | 2 | 59 | 176 | 782 | 921 | 1.10e-11 | 63.9 |
| MsG0680034320.01.T01 | MTR_7g088370 | 28.226 | 124 | 75 | 1 | 59 | 168 | 519 | 642 | 1.27e-11 | 63.5 |
| MsG0680034320.01.T01 | MTR_2g036060 | 36.471 | 85 | 54 | 0 | 84 | 168 | 1032 | 1116 | 2.93e-11 | 62.8 |
| MsG0680034320.01.T01 | MTR_2g036060 | 36.471 | 85 | 54 | 0 | 84 | 168 | 1057 | 1141 | 3.02e-11 | 62.8 |
| MsG0680034320.01.T01 | MTR_8g027725 | 41.892 | 74 | 42 | 1 | 95 | 168 | 818 | 890 | 5.43e-11 | 62.0 |
| MsG0680034320.01.T01 | MTR_8g027725 | 41.892 | 74 | 42 | 1 | 95 | 168 | 803 | 875 | 5.46e-11 | 62.0 |
| MsG0680034320.01.T01 | MTR_3g091310 | 41.892 | 74 | 42 | 1 | 95 | 168 | 932 | 1004 | 6.24e-11 | 61.6 |
| MsG0680034320.01.T01 | MTR_7g117355 | 39.560 | 91 | 44 | 2 | 88 | 168 | 816 | 905 | 6.69e-11 | 61.6 |
| MsG0680034320.01.T01 | MTR_3g091310 | 41.892 | 74 | 42 | 1 | 95 | 168 | 838 | 910 | 6.82e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034320.01.T01 | AT2G44150 | 63.291 | 237 | 46 | 5 | 21 | 216 | 49 | 285 | 1.28e-82 | 250 |
| MsG0680034320.01.T01 | AT3G59960 | 61.463 | 205 | 52 | 2 | 34 | 211 | 60 | 264 | 9.91e-74 | 225 |
| MsG0680034320.01.T01 | AT3G59960 | 61.463 | 205 | 52 | 2 | 34 | 211 | 60 | 264 | 9.91e-74 | 225 |
| MsG0680034320.01.T01 | AT3G59960 | 61.463 | 205 | 52 | 2 | 34 | 211 | 60 | 264 | 9.91e-74 | 225 |
| MsG0680034320.01.T01 | AT3G59960 | 61.463 | 205 | 52 | 2 | 34 | 211 | 60 | 264 | 5.92e-73 | 224 |
| MsG0680034320.01.T01 | AT4G30860 | 41.315 | 213 | 93 | 3 | 17 | 203 | 265 | 471 | 2.35e-47 | 162 |
| MsG0680034320.01.T01 | AT1G76710 | 35.071 | 211 | 107 | 4 | 19 | 199 | 21 | 231 | 1.91e-26 | 106 |
| MsG0680034320.01.T01 | AT1G76710 | 35.071 | 211 | 107 | 4 | 19 | 199 | 21 | 231 | 2.22e-26 | 106 |
| MsG0680034320.01.T01 | AT1G76710 | 35.071 | 211 | 107 | 4 | 19 | 199 | 21 | 231 | 2.71e-26 | 105 |
| MsG0680034320.01.T01 | AT1G76710 | 35.071 | 211 | 107 | 4 | 19 | 199 | 21 | 231 | 2.71e-26 | 105 |
| MsG0680034320.01.T01 | AT1G77300 | 36.041 | 197 | 96 | 6 | 34 | 200 | 974 | 1170 | 1.28e-24 | 101 |
| MsG0680034320.01.T01 | AT1G77300 | 34.975 | 203 | 102 | 6 | 34 | 206 | 974 | 1176 | 1.57e-24 | 101 |
| MsG0680034320.01.T01 | AT2G35160 | 36.441 | 118 | 71 | 1 | 59 | 176 | 622 | 735 | 1.30e-15 | 75.5 |
| MsG0680034320.01.T01 | AT2G35160 | 36.441 | 118 | 71 | 1 | 59 | 176 | 622 | 735 | 1.30e-15 | 75.5 |
| MsG0680034320.01.T01 | AT2G35160 | 36.441 | 118 | 71 | 1 | 59 | 176 | 622 | 735 | 1.30e-15 | 75.5 |
| MsG0680034320.01.T01 | AT2G35160 | 36.441 | 118 | 71 | 1 | 59 | 176 | 622 | 735 | 1.30e-15 | 75.5 |
| MsG0680034320.01.T01 | AT2G35160 | 36.441 | 118 | 71 | 1 | 59 | 176 | 586 | 699 | 1.42e-15 | 75.5 |
| MsG0680034320.01.T01 | AT2G23740 | 32.530 | 166 | 89 | 5 | 57 | 201 | 1197 | 1360 | 4.69e-15 | 73.9 |
| MsG0680034320.01.T01 | AT2G23740 | 32.530 | 166 | 89 | 5 | 57 | 201 | 1197 | 1360 | 4.69e-15 | 73.9 |
| MsG0680034320.01.T01 | AT2G23740 | 32.530 | 166 | 89 | 5 | 57 | 201 | 1197 | 1360 | 4.69e-15 | 73.9 |
| MsG0680034320.01.T01 | AT2G23740 | 32.530 | 166 | 89 | 5 | 57 | 201 | 1190 | 1353 | 5.05e-15 | 73.9 |
| MsG0680034320.01.T01 | AT5G42400 | 34.921 | 126 | 56 | 3 | 97 | 196 | 1262 | 1387 | 7.14e-12 | 64.7 |
| MsG0680034320.01.T01 | AT5G42400 | 34.921 | 126 | 56 | 3 | 97 | 196 | 1262 | 1387 | 7.14e-12 | 64.7 |
| MsG0680034320.01.T01 | AT5G42400 | 34.921 | 126 | 56 | 3 | 97 | 196 | 1262 | 1387 | 7.14e-12 | 64.7 |
| MsG0680034320.01.T01 | AT5G42400 | 34.921 | 126 | 56 | 3 | 97 | 196 | 1262 | 1387 | 7.14e-12 | 64.7 |
| MsG0680034320.01.T01 | AT5G42400 | 34.921 | 126 | 56 | 3 | 97 | 196 | 1262 | 1387 | 7.14e-12 | 64.7 |
| MsG0680034320.01.T01 | AT5G42400 | 34.921 | 126 | 56 | 3 | 97 | 196 | 1262 | 1387 | 7.14e-12 | 64.7 |
| MsG0680034320.01.T01 | AT5G42400 | 34.921 | 126 | 56 | 3 | 97 | 196 | 1262 | 1387 | 7.14e-12 | 64.7 |
| MsG0680034320.01.T01 | AT5G42400 | 34.921 | 126 | 56 | 3 | 97 | 196 | 1262 | 1387 | 7.14e-12 | 64.7 |
| MsG0680034320.01.T01 | AT2G22740 | 31.429 | 140 | 73 | 4 | 60 | 176 | 592 | 731 | 9.53e-12 | 64.3 |
| MsG0680034320.01.T01 | AT2G22740 | 31.429 | 140 | 73 | 4 | 60 | 176 | 592 | 731 | 9.53e-12 | 64.3 |
| MsG0680034320.01.T01 | AT2G23740 | 34.454 | 119 | 65 | 2 | 57 | 163 | 1197 | 1314 | 1.17e-11 | 63.9 |
| MsG0680034320.01.T01 | AT2G23740 | 34.454 | 119 | 65 | 2 | 57 | 163 | 1197 | 1314 | 1.17e-11 | 63.9 |
| MsG0680034320.01.T01 | AT3G03750 | 31.933 | 119 | 69 | 2 | 59 | 165 | 166 | 284 | 1.29e-11 | 63.2 |
| MsG0680034320.01.T01 | AT3G61740 | 38.889 | 90 | 51 | 2 | 95 | 184 | 850 | 935 | 7.37e-11 | 61.6 |
| MsG0680034320.01.T01 | AT3G61740 | 38.889 | 90 | 51 | 2 | 95 | 184 | 886 | 971 | 7.41e-11 | 61.6 |
| MsG0680034320.01.T01 | AT4G27910 | 41.892 | 74 | 42 | 1 | 95 | 168 | 896 | 968 | 9.65e-11 | 61.2 |
Find 45 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGATATGCCACTAATTT+AGG | 0.249497 | 6:-85631225 | None:intergenic |
| CATAGCAGGTTTGTTCAATT+TGG | 0.254145 | 6:+85631135 | MsG0680034320.01.T01:intron |
| CATTTCTGCATCTCAGTATT+CGG | 0.269242 | 6:-85630504 | None:intergenic |
| TTCAATGCCCATCATGAAAA+AGG | 0.289802 | 6:+85628870 | MsG0680034320.01.T01:CDS |
| GCCTAAATTAGTGGCATATC+AGG | 0.297012 | 6:+85631224 | MsG0680034320.01.T01:CDS |
| CTTCTGTCTAGCTGTTCTTC+AGG | 0.341155 | 6:+85629815 | MsG0680034320.01.T01:CDS |
| CAGTATTCGGGCAGCAACTA+TGG | 0.356191 | 6:-85630491 | None:intergenic |
| GTGATAGATGCGACAAATAA+AGG | 0.361111 | 6:+85630447 | MsG0680034320.01.T01:CDS |
| TGTTCAGTGTAGGCGTAAGC+TGG | 0.410254 | 6:+85631185 | MsG0680034320.01.T01:CDS |
| ATGTGAAATCAATCGAGATA+TGG | 0.429587 | 6:+85630425 | MsG0680034320.01.T01:CDS |
| AAACATGCGAACAGAGGCTT+TGG | 0.435383 | 6:+85630367 | MsG0680034320.01.T01:CDS |
| CGAATACTGAGATGCAGAAA+TGG | 0.448001 | 6:+85630505 | MsG0680034320.01.T01:CDS |
| ACCTACCAAGCCTAAATTAG+TGG | 0.455934 | 6:+85631215 | MsG0680034320.01.T01:CDS |
| GGCAAGAGAAAGAGTGATGA+TGG | 0.457143 | 6:+85629533 | MsG0680034320.01.T01:CDS |
| CTACTCTATTTATGAGAAGA+TGG | 0.460126 | 6:-85631252 | None:intergenic |
| GACTTTCTTGCTTCCTTCAA+AGG | 0.464506 | 6:-85628837 | None:intergenic |
| TAGACTGAGAAATGTGGATC+TGG | 0.471672 | 6:+85630172 | MsG0680034320.01.T01:intron |
| AGATATATATCTCACTAAGA+AGG | 0.474007 | 6:+85629511 | MsG0680034320.01.T01:intron |
| ATTTCTGCATCTCAGTATTC+GGG | 0.478549 | 6:-85630503 | None:intergenic |
| TAGGCAGAGAATACCTTTGA+AGG | 0.483061 | 6:+85628824 | None:intergenic |
| TGTTCTTCAGGCTGCAAATG+TGG | 0.494922 | 6:+85629827 | MsG0680034320.01.T01:CDS |
| ATATGCCACTAATTTAGGCT+TGG | 0.510433 | 6:-85631220 | None:intergenic |
| GTTCTTCAGGCTGCAAATGT+GGG | 0.537608 | 6:+85629828 | MsG0680034320.01.T01:CDS |
| GATATATATCTCACTAAGAA+GGG | 0.539250 | 6:+85629512 | MsG0680034320.01.T01:intron |
| GTAATTGAATATGTCGGAGA+AGG | 0.545438 | 6:+85630232 | MsG0680034320.01.T01:CDS |
| GCAGATGAAGATATAAAGCA+TGG | 0.559769 | 6:+85630202 | MsG0680034320.01.T01:CDS |
| GCCACTAATTTAGGCTTGGT+AGG | 0.568833 | 6:-85631216 | None:intergenic |
| GAAGCAAGAAAGTCTTGTTG+TGG | 0.583896 | 6:+85628846 | MsG0680034320.01.T01:CDS |
| TCTGATTCTACTGCTGTATG+TGG | 0.586087 | 6:+85629578 | MsG0680034320.01.T01:CDS |
| GAGTTTGTAATTGAATATGT+CGG | 0.587237 | 6:+85630226 | MsG0680034320.01.T01:CDS |
| GTTCAGTGTAGGCGTAAGCT+GGG | 0.595432 | 6:+85631186 | MsG0680034320.01.T01:CDS |
| CAGATGAAGATATAAAGCAT+GGG | 0.595965 | 6:+85630203 | MsG0680034320.01.T01:CDS |
| ACTGTGGTGCTGTTCAGTGT+AGG | 0.609909 | 6:+85631175 | MsG0680034320.01.T01:CDS |
| CTTTGGAATATGAAAGATCG+TGG | 0.610205 | 6:+85630384 | MsG0680034320.01.T01:CDS |
| TTTGGAATATGAAAGATCGT+GGG | 0.627929 | 6:+85630385 | MsG0680034320.01.T01:CDS |
| ATGATAAAACATGCGAACAG+AGG | 0.637191 | 6:+85630361 | MsG0680034320.01.T01:CDS |
| GTGGTAGAGATTGCCACTGT+GGG | 0.651295 | 6:+85629597 | MsG0680034320.01.T01:CDS |
| GAAATGTGGATCTGGAATTG+TGG | 0.670067 | 6:+85630180 | MsG0680034320.01.T01:CDS |
| AGATGAAGATATAAAGCATG+GGG | 0.676792 | 6:+85630204 | MsG0680034320.01.T01:CDS |
| TGTGGTAGAGATTGCCACTG+TGG | 0.693149 | 6:+85629596 | MsG0680034320.01.T01:CDS |
| TTGGAATATGAAAGATCGTG+GGG | 0.693630 | 6:+85630386 | MsG0680034320.01.T01:CDS |
| GCAGATCAAGATTGCCACTG+TGG | 0.694777 | 6:+85631159 | MsG0680034320.01.T01:CDS |
| ACTTAGTTACTTACCCACAG+TGG | 0.732787 | 6:-85629610 | None:intergenic |
| TACACTGAACAGCACCACAG+TGG | 0.733510 | 6:-85631173 | None:intergenic |
| TGCTTGTAGACTGAGAAATG+TGG | 0.734376 | 6:+85630166 | MsG0680034320.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAACATAAATAAAATATA+CGG | - | Chr6:85628935-85628954 | None:intergenic | 10.0% |
| !!! | ATTAATTTCATCTTTTTAAT+AGG | - | Chr6:85629887-85629906 | None:intergenic | 10.0% |
| !! | TAAAAAGATGAAATTAATCA+AGG | + | Chr6:85629889-85629908 | MsG0680034320.01.T01:CDS | 15.0% |
| !!! | ATTTTAGAGAAACTTTATTT+AGG | + | Chr6:85630080-85630099 | MsG0680034320.01.T01:intron | 15.0% |
| !! | AATCATCTATCAAATAATGT+CGG | - | Chr6:85630586-85630605 | None:intergenic | 20.0% |
| !! | ACCAAAAGTAAAATCTAAAA+AGG | - | Chr6:85629100-85629119 | None:intergenic | 20.0% |
| !! | TTAAATAAGTTAATCCAAAC+AGG | + | Chr6:85631017-85631036 | MsG0680034320.01.T01:intron | 20.0% |
| !!! | AAGTAGGTCTAAAATAAAAT+AGG | - | Chr6:85630304-85630323 | None:intergenic | 20.0% |
| !!! | ACCTTTTTAGATTTTACTTT+TGG | + | Chr6:85629096-85629115 | MsG0680034320.01.T01:intron | 20.0% |
| !!! | ATTTCATCTTTTTAATAGGA+CGG | - | Chr6:85629883-85629902 | None:intergenic | 20.0% |
| !!! | TATTTGATAGATGATTAGTT+AGG | + | Chr6:85630590-85630609 | MsG0680034320.01.T01:intron | 20.0% |
| !!! | TTCTAATTGTTTTATTCACA+TGG | + | Chr6:85630534-85630553 | MsG0680034320.01.T01:intron | 20.0% |
| ! | AAAAATAATCCTGATTCAGA+AGG | - | Chr6:85629920-85629939 | None:intergenic | 25.0% |
| ! | AGATATATATCTCACTAAGA+AGG | + | Chr6:85629511-85629530 | MsG0680034320.01.T01:intron | 25.0% |
| ! | ATGTTCGTGATTCATAAAAT+AGG | - | Chr6:85629710-85629729 | None:intergenic | 25.0% |
| ! | GAGTTTGTAATTGAATATGT+CGG | + | Chr6:85630226-85630245 | MsG0680034320.01.T01:CDS | 25.0% |
| ! | GATATATATCTCACTAAGAA+GGG | + | Chr6:85629512-85629531 | MsG0680034320.01.T01:intron | 25.0% |
| ! | TAACAACAACAATCAAAAGT+AGG | - | Chr6:85630320-85630339 | None:intergenic | 25.0% |
| ! | TGTATTCTGTTAAGTTAAGA+TGG | + | Chr6:85628983-85629002 | MsG0680034320.01.T01:intron | 25.0% |
| ! | TTAATCTATTTACCCAAACA+AGG | - | Chr6:85630786-85630805 | None:intergenic | 25.0% |
| ! | TTAGAGAGAACTTACAAAAA+TGG | - | Chr6:85630961-85630980 | None:intergenic | 25.0% |
| ! | TTCTTTGATTACACTCTTTA+AGG | + | Chr6:85630760-85630779 | MsG0680034320.01.T01:intron | 25.0% |
| ! | TTGAATCACACACATAAAAT+AGG | - | Chr6:85629735-85629754 | None:intergenic | 25.0% |
| !! | ATGATTTTCTTATTGCAAGT+TGG | + | Chr6:85630036-85630055 | MsG0680034320.01.T01:intron | 25.0% |
| !! | ATTTTATGTGTGTGATTCAA+TGG | + | Chr6:85629735-85629754 | MsG0680034320.01.T01:intron | 25.0% |
| !! | CTTAATTTTATAAGCTCTCT+AGG | - | Chr6:85630909-85630928 | None:intergenic | 25.0% |
| !! | TTCTGAATCAGGATTATTTT+TGG | + | Chr6:85629919-85629938 | MsG0680034320.01.T01:intron | 25.0% |
| !! | TTTTATGTGTGTGATTCAAT+GGG | + | Chr6:85629736-85629755 | MsG0680034320.01.T01:intron | 25.0% |
| !!! | ATTTTACTTTTGGTTTGCTA+AGG | + | Chr6:85629106-85629125 | MsG0680034320.01.T01:intron | 25.0% |
| !!! | TCTGAATCAGGATTATTTTT+GGG | + | Chr6:85629920-85629939 | MsG0680034320.01.T01:intron | 25.0% |
| !!! | TTTTACTTTTGGTTTGCTAA+GGG | + | Chr6:85629107-85629126 | MsG0680034320.01.T01:intron | 25.0% |
| AATATACGGAACTCAATAGA+AGG | - | Chr6:85628921-85628940 | None:intergenic | 30.0% | |
| AATCTGACCAACACTAATAA+AGG | - | Chr6:85629291-85629310 | None:intergenic | 30.0% | |
| ACAACTCATTATGTCAAATG+TGG | - | Chr6:85630139-85630158 | None:intergenic | 30.0% | |
| ACCATCTATTATCCTAAAGA+TGG | - | Chr6:85630661-85630680 | None:intergenic | 30.0% | |
| ACTCTCTTCTAATGAAAGTT+TGG | + | Chr6:85631051-85631070 | MsG0680034320.01.T01:intron | 30.0% | |
| AGATGAAGATATAAAGCATG+GGG | + | Chr6:85630204-85630223 | MsG0680034320.01.T01:CDS | 30.0% | |
| ATAAAGACATTCATCAAGCA+AGG | - | Chr6:85629354-85629373 | None:intergenic | 30.0% | |
| ATAGATGGTGAAACTAGAAT+CGG | + | Chr6:85630672-85630691 | MsG0680034320.01.T01:intron | 30.0% | |
| ATGTGAAATCAATCGAGATA+TGG | + | Chr6:85630425-85630444 | MsG0680034320.01.T01:CDS | 30.0% | |
| ATTCATAGTTGAAATGGAGT+AGG | - | Chr6:85629684-85629703 | None:intergenic | 30.0% | |
| CAGATGAAGATATAAAGCAT+GGG | + | Chr6:85630203-85630222 | MsG0680034320.01.T01:CDS | 30.0% | |
| GGCTAAATACAGAAAAAATG+AGG | - | Chr6:85629422-85629441 | None:intergenic | 30.0% | |
| TAAAGACATTCATCAAGCAA+GGG | - | Chr6:85629353-85629372 | None:intergenic | 30.0% | |
| TACTTATATGATGAGCACTT+AGG | - | Chr6:85630823-85630842 | None:intergenic | 30.0% | |
| TCACTATATGTATGTGCTTA+TGG | + | Chr6:85629060-85629079 | MsG0680034320.01.T01:intron | 30.0% | |
| TCTGATAAACAGAGAATCAA+AGG | - | Chr6:85629138-85629157 | None:intergenic | 30.0% | |
| TTAGAAGAGAGTTCAACTTA+TGG | - | Chr6:85631043-85631062 | None:intergenic | 30.0% | |
| TTCCAGATTCGATTAAAAAC+AGG | + | Chr6:85629233-85629252 | MsG0680034320.01.T01:intron | 30.0% | |
| ! | TTTGGAATATGAAAGATCGT+GGG | + | Chr6:85630385-85630404 | MsG0680034320.01.T01:CDS | 30.0% |
| !! | ATCAAAGAAAGTACTCATAC+TGG | - | Chr6:85630749-85630768 | None:intergenic | 30.0% |
| !! | GAAACAACCTTTTTCATGAT+GGG | - | Chr6:85628880-85628899 | None:intergenic | 30.0% |
| !! | TCCATCTTTAGGATAATAGA+TGG | + | Chr6:85630657-85630676 | MsG0680034320.01.T01:intron | 30.0% |
| !! | TGAAACAACCTTTTTCATGA+TGG | - | Chr6:85628881-85628900 | None:intergenic | 30.0% |
| !!! | CTTTCTTGTTTTCCATCTTT+AGG | + | Chr6:85630646-85630665 | MsG0680034320.01.T01:intron | 30.0% |
| AAACAGACAAACTGTGTAAC+AGG | - | Chr6:85629444-85629463 | None:intergenic | 35.0% | |
| AAAGGATACTGCGCTTTATA+TGG | - | Chr6:85629273-85629292 | None:intergenic | 35.0% | |
| AACAGACAAACTGTGTAACA+GGG | - | Chr6:85629443-85629462 | None:intergenic | 35.0% | |
| AAGGATACTGCGCTTTATAT+GGG | - | Chr6:85629272-85629291 | None:intergenic | 35.0% | |
| AAGGGCAATACTGTAAACAT+CGG | - | Chr6:85629335-85629354 | None:intergenic | 35.0% | |
| AAGGTATAACCTTCTGAATC+AGG | + | Chr6:85629908-85629927 | MsG0680034320.01.T01:intron | 35.0% | |
| ACCTGATATGCCACTAATTT+AGG | - | Chr6:85631228-85631247 | None:intergenic | 35.0% | |
| ACTTAACAGAATACAACAGC+AGG | - | Chr6:85628978-85628997 | None:intergenic | 35.0% | |
| AGGCAGATTCATAGTTGAAA+TGG | - | Chr6:85629690-85629709 | None:intergenic | 35.0% | |
| ATATGCCACTAATTTAGGCT+TGG | - | Chr6:85631223-85631242 | None:intergenic | 35.0% | |
| ATCGATAACTGTGTAGAAAG+AGG | - | Chr6:85630343-85630362 | None:intergenic | 35.0% | |
| ATGATAAAACATGCGAACAG+AGG | + | Chr6:85630361-85630380 | MsG0680034320.01.T01:CDS | 35.0% | |
| ATTTCTGCATCTCAGTATTC+GGG | - | Chr6:85630506-85630525 | None:intergenic | 35.0% | |
| CATTTCTGCATCTCAGTATT+CGG | - | Chr6:85630507-85630526 | None:intergenic | 35.0% | |
| GCAGATGAAGATATAAAGCA+TGG | + | Chr6:85630202-85630221 | MsG0680034320.01.T01:CDS | 35.0% | |
| GCAGTATCCTTTATTAGTGT+TGG | + | Chr6:85629281-85629300 | MsG0680034320.01.T01:intron | 35.0% | |
| GTAATTGAATATGTCGGAGA+AGG | + | Chr6:85630232-85630251 | MsG0680034320.01.T01:CDS | 35.0% | |
| GTGATAGATGCGACAAATAA+AGG | + | Chr6:85630447-85630466 | MsG0680034320.01.T01:CDS | 35.0% | |
| TCTCAAGAAATACTGTACTC+TGG | + | Chr6:85629010-85629029 | MsG0680034320.01.T01:intron | 35.0% | |
| TTCAATGCCCATCATGAAAA+AGG | + | Chr6:85628870-85628889 | MsG0680034320.01.T01:CDS | 35.0% | |
| TTGGAATATGAAAGATCGTG+GGG | + | Chr6:85630386-85630405 | MsG0680034320.01.T01:CDS | 35.0% | |
| ! | CATAGCAGGTTTGTTCAATT+TGG | + | Chr6:85631135-85631154 | MsG0680034320.01.T01:intron | 35.0% |
| ! | GCTTTACACTTTTCATGTGT+TGG | + | Chr6:85629637-85629656 | MsG0680034320.01.T01:intron | 35.0% |
| ! | GGTGGATTCTAAGTTTCTAA+CGG | + | Chr6:85631112-85631131 | MsG0680034320.01.T01:intron | 35.0% |
| !! | CTTTGGAATATGAAAGATCG+TGG | + | Chr6:85630384-85630403 | MsG0680034320.01.T01:CDS | 35.0% |
| !! | TCTAATGAAAGTTTGGTGTC+TGG | + | Chr6:85631058-85631077 | MsG0680034320.01.T01:intron | 35.0% |
| !!! | GTCCTGTTTTTAATCGAATC+TGG | - | Chr6:85629238-85629257 | None:intergenic | 35.0% |
| ACCTACCAAGCCTAAATTAG+TGG | + | Chr6:85631215-85631234 | MsG0680034320.01.T01:CDS | 40.0% | |
| ACGAAGCTGATGAACAATCT+TGG | + | Chr6:85629190-85629209 | MsG0680034320.01.T01:intron | 40.0% | |
| ACTTAGTTACTTACCCACAG+TGG | - | Chr6:85629613-85629632 | None:intergenic | 40.0% | |
| AGTTCAACTTATGGCCTGTT+TGG | - | Chr6:85631034-85631053 | None:intergenic | 40.0% | |
| CGAATACTGAGATGCAGAAA+TGG | + | Chr6:85630505-85630524 | MsG0680034320.01.T01:CDS | 40.0% | |
| GACTTTCTTGCTTCCTTCAA+AGG | - | Chr6:85628840-85628859 | None:intergenic | 40.0% | |
| GCAAGCCGTGATATAAAGAA+GGG | + | Chr6:85630702-85630721 | MsG0680034320.01.T01:intron | 40.0% | |
| GCCTAAATTAGTGGCATATC+AGG | + | Chr6:85631224-85631243 | MsG0680034320.01.T01:CDS | 40.0% | |
| GTATGACTCTGTTGTAGTGA+TGG | + | Chr6:85631091-85631110 | MsG0680034320.01.T01:intron | 40.0% | |
| GTGTGTGATTCAATGGGAAT+GGG | + | Chr6:85629742-85629761 | MsG0680034320.01.T01:intron | 40.0% | |
| GTTCGCCCTTCTTTATATCA+CGG | - | Chr6:85630710-85630729 | None:intergenic | 40.0% | |
| TAAGTTTCTAACGGCATAGC+AGG | + | Chr6:85631121-85631140 | MsG0680034320.01.T01:intron | 40.0% | |
| TAGACTGAGAAATGTGGATC+TGG | + | Chr6:85630172-85630191 | MsG0680034320.01.T01:intron | 40.0% | |
| TCTGATTCTACTGCTGTATG+TGG | + | Chr6:85629578-85629597 | MsG0680034320.01.T01:CDS | 40.0% | |
| TGCAAGCCGTGATATAAAGA+AGG | + | Chr6:85630701-85630720 | MsG0680034320.01.T01:intron | 40.0% | |
| TGCTTGTAGACTGAGAAATG+TGG | + | Chr6:85630166-85630185 | MsG0680034320.01.T01:intron | 40.0% | |
| TGTGTGTGATTCAATGGGAA+TGG | + | Chr6:85629741-85629760 | MsG0680034320.01.T01:intron | 40.0% | |
| ! | GAAATGTGGATCTGGAATTG+TGG | + | Chr6:85630180-85630199 | MsG0680034320.01.T01:CDS | 40.0% |
| !! | ACACTCTTTAAGGCCTTGTT+TGG | + | Chr6:85630770-85630789 | MsG0680034320.01.T01:intron | 40.0% |
| !! | CACTCTTTAAGGCCTTGTTT+GGG | + | Chr6:85630771-85630790 | MsG0680034320.01.T01:intron | 40.0% |
| !! | GAAGCAAGAAAGTCTTGTTG+TGG | + | Chr6:85628846-85628865 | MsG0680034320.01.T01:CDS | 40.0% |
| !! | TACTGTACTCTGGTTCTGAT+AGG | + | Chr6:85629020-85629039 | MsG0680034320.01.T01:intron | 40.0% |
| AAACATGCGAACAGAGGCTT+TGG | + | Chr6:85630367-85630386 | MsG0680034320.01.T01:CDS | 45.0% | |
| ATATGTCGGAGAAGGTGATG+TGG | + | Chr6:85630240-85630259 | MsG0680034320.01.T01:intron | 45.0% | |
| CTTCTGTCTAGCTGTTCTTC+AGG | + | Chr6:85629815-85629834 | MsG0680034320.01.T01:CDS | 45.0% | |
| GGCAAGAGAAAGAGTGATGA+TGG | + | Chr6:85629533-85629552 | MsG0680034320.01.T01:CDS | 45.0% | |
| GTTCTTCAGGCTGCAAATGT+GGG | + | Chr6:85629828-85629847 | MsG0680034320.01.T01:CDS | 45.0% | |
| TGACTCTGTTGTAGTGATGG+TGG | + | Chr6:85631094-85631113 | MsG0680034320.01.T01:intron | 45.0% | |
| TGTTCTTCAGGCTGCAAATG+TGG | + | Chr6:85629827-85629846 | MsG0680034320.01.T01:CDS | 45.0% | |
| ! | GCCACTAATTTAGGCTTGGT+AGG | - | Chr6:85631219-85631238 | None:intergenic | 45.0% |
| !! | CTAGACAGAAGCATCCTACA+GGG | - | Chr6:85629806-85629825 | None:intergenic | 45.0% |
| CAGTATTCGGGCAGCAACTA+TGG | - | Chr6:85630494-85630513 | None:intergenic | 50.0% | |
| CTTATGCTCACTGTCCCTGT+AGG | + | Chr6:85629789-85629808 | MsG0680034320.01.T01:intron | 50.0% | |
| GCAGATCAAGATTGCCACTG+TGG | + | Chr6:85631159-85631178 | MsG0680034320.01.T01:CDS | 50.0% | |
| GTGGTAGAGATTGCCACTGT+GGG | + | Chr6:85629597-85629616 | MsG0680034320.01.T01:CDS | 50.0% | |
| GTTCAGTGTAGGCGTAAGCT+GGG | + | Chr6:85631186-85631205 | MsG0680034320.01.T01:CDS | 50.0% | |
| TACACTGAACAGCACCACAG+TGG | - | Chr6:85631176-85631195 | None:intergenic | 50.0% | |
| TGTGGTAGAGATTGCCACTG+TGG | + | Chr6:85629596-85629615 | MsG0680034320.01.T01:CDS | 50.0% | |
| TGTTCAGTGTAGGCGTAAGC+TGG | + | Chr6:85631185-85631204 | MsG0680034320.01.T01:CDS | 50.0% | |
| !! | ACTGTGGTGCTGTTCAGTGT+AGG | + | Chr6:85631175-85631194 | MsG0680034320.01.T01:CDS | 50.0% |
| !! | GCTAGACAGAAGCATCCTAC+AGG | - | Chr6:85629807-85629826 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 85628828 | 85631269 | 85628828 | ID=MsG0680034320.01;Name=MsG0680034320.01 |
| Chr6 | mRNA | 85628828 | 85631269 | 85628828 | ID=MsG0680034320.01.T01;Parent=MsG0680034320.01;Name=MsG0680034320.01.T01;_AED=0.47;_eAED=0.53;_QI=0|0|0|1|0.6|0.66|6|0|216 |
| Chr6 | exon | 85628828 | 85628891 | 85628828 | ID=MsG0680034320.01.T01:exon:18057;Parent=MsG0680034320.01.T01 |
| Chr6 | exon | 85629513 | 85629618 | 85629513 | ID=MsG0680034320.01.T01:exon:18058;Parent=MsG0680034320.01.T01 |
| Chr6 | exon | 85629811 | 85629910 | 85629811 | ID=MsG0680034320.01.T01:exon:18059;Parent=MsG0680034320.01.T01 |
| Chr6 | exon | 85630175 | 85630253 | 85630175 | ID=MsG0680034320.01.T01:exon:18060;Parent=MsG0680034320.01.T01 |
| Chr6 | exon | 85630355 | 85630526 | 85630355 | ID=MsG0680034320.01.T01:exon:18061;Parent=MsG0680034320.01.T01 |
| Chr6 | exon | 85631140 | 85631269 | 85631140 | ID=MsG0680034320.01.T01:exon:18062;Parent=MsG0680034320.01.T01 |
| Chr6 | CDS | 85628828 | 85628891 | 85628828 | ID=MsG0680034320.01.T01:cds;Parent=MsG0680034320.01.T01 |
| Chr6 | CDS | 85629513 | 85629618 | 85629513 | ID=MsG0680034320.01.T01:cds;Parent=MsG0680034320.01.T01 |
| Chr6 | CDS | 85629811 | 85629910 | 85629811 | ID=MsG0680034320.01.T01:cds;Parent=MsG0680034320.01.T01 |
| Chr6 | CDS | 85630175 | 85630253 | 85630175 | ID=MsG0680034320.01.T01:cds;Parent=MsG0680034320.01.T01 |
| Chr6 | CDS | 85630355 | 85630526 | 85630355 | ID=MsG0680034320.01.T01:cds;Parent=MsG0680034320.01.T01 |
| Chr6 | CDS | 85631140 | 85631269 | 85631140 | ID=MsG0680034320.01.T01:cds;Parent=MsG0680034320.01.T01 |
| Gene Sequence |
| Protein sequence |
