AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0084720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084720 MtrunA17_Chr1g0199331 98.413 189 2 1 1 189 1 188 1.27e-137 383
Msa0084720 MtrunA17_Chr3g0109721 64.557 158 55 1 30 187 8 164 2.77e-73 220
Msa0084720 MtrunA17_Chr5g0433561 64.557 158 55 1 30 187 8 164 6.64e-73 219
Msa0084720 MtrunA17_Chr8g0390561 56.442 163 70 1 25 187 2 163 2.15e-68 207
Msa0084720 MtrunA17_Chr2g0276941 45.402 174 94 1 25 198 8 180 2.78e-51 165
Msa0084720 MtrunA17_Chr8g0381841 45.856 181 93 2 22 198 3 182 3.75e-51 164
Msa0084720 MtrunA17_Chr8g0351861 49.057 159 80 1 34 192 18 175 6.62e-50 161
Msa0084720 MtrunA17_Chr2g0319951 45.455 165 89 1 34 198 15 178 1.97e-49 160
Msa0084720 MtrunA17_Chr2g0315551 46.061 165 88 1 34 198 15 178 3.55e-49 159
Msa0084720 MtrunA17_Chr3g0123821 46.667 165 87 1 34 198 18 181 6.00e-49 159
Msa0084720 MtrunA17_Chr4g0032201 46.061 165 88 1 34 198 14 177 1.72e-48 157
Msa0084720 MtrunA17_Chr3g0123971 46.584 161 85 1 32 192 9 168 2.00e-48 157
Msa0084720 MtrunA17_Chr8g0382221 46.584 161 85 1 32 192 9 168 2.88e-48 156
Msa0084720 MtrunA17_Chr3g0112681 46.061 165 88 1 34 198 14 177 3.79e-48 156
Msa0084720 MtrunA17_Chr5g0400131 47.436 156 81 1 32 187 9 163 4.16e-48 156
Msa0084720 MtrunA17_Chr6g0458081 42.857 154 87 1 34 187 8 160 1.74e-47 155
Msa0084720 MtrunA17_Chr2g0283131 44.848 165 90 1 34 198 15 178 1.43e-46 152
Msa0084720 MtrunA17_Chr2g0290891 42.208 154 88 1 34 187 8 160 5.58e-46 151
Msa0084720 MtrunA17_Chr4g0040781 44.242 165 91 1 34 198 15 178 6.86e-46 150
Msa0084720 MtrunA17_Chr1g0174281 43.030 165 93 1 34 198 17 180 7.96e-46 151
Msa0084720 MtrunA17_Chr4g0046261 43.636 165 92 1 34 198 15 178 8.33e-46 150
Msa0084720 MtrunA17_Chr8g0349711 44.156 154 85 1 34 187 8 160 9.06e-46 150
Msa0084720 MtrunA17_Chr4g0055081 45.513 156 84 1 32 187 9 163 1.49e-45 149
Msa0084720 MtrunA17_Chr7g0231131 46.104 154 82 1 34 187 17 169 2.24e-45 149
Msa0084720 MtrunA17_Chr7g0214241 45.806 155 83 1 34 188 17 170 3.87e-45 149
Msa0084720 MtrunA17_Chr2g0325091 43.636 165 92 1 34 198 13 176 9.29e-45 148
Msa0084720 MtrunA17_Chr7g0234201 45.806 155 83 1 34 188 15 168 1.26e-44 147
Msa0084720 MtrunA17_Chr1g0182301 45.513 156 83 2 33 187 16 170 4.40e-44 146
Msa0084720 MtrunA17_Chr1g0182321 45.513 156 83 2 33 187 16 170 7.64e-44 145
Msa0084720 MtrunA17_Chr1g0212521 45.513 156 83 2 33 187 16 170 1.16e-43 145
Msa0084720 MtrunA17_Chr4g0030911 45.513 156 83 2 33 187 16 170 1.24e-43 145
Msa0084720 MtrunA17_Chr7g0263071 45.513 156 83 2 33 187 16 170 1.33e-43 145
Msa0084720 MtrunA17_Chr7g0275991 41.212 165 96 1 34 198 22 185 1.39e-43 145
Msa0084720 MtrunA17_Chr8g0346421 44.242 165 91 1 34 198 28 191 1.39e-43 145
Msa0084720 MtrunA17_Chr8g0349681 42.857 154 87 1 34 187 386 538 2.14e-43 152
Msa0084720 MtrunA17_Chr8g0349681 42.857 154 87 1 34 187 177 329 4.49e-42 149
Msa0084720 MtrunA17_Chr8g0349681 41.667 156 90 1 34 189 15 169 1.88e-40 144
Msa0084720 MtrunA17_Chr1g0189361 43.750 160 89 1 34 193 16 174 3.32e-43 144
Msa0084720 MtrunA17_Chr4g0055651 43.506 154 86 1 34 187 10 162 9.85e-43 142
Msa0084720 MtrunA17_Chr6g0482721 43.030 165 93 1 34 198 14 177 1.67e-42 142
Msa0084720 MtrunA17_Chr8g0335471 43.506 154 86 1 34 187 10 162 1.58e-41 139
Msa0084720 MtrunA17_Chr7g0250531 42.857 154 87 1 34 187 10 162 2.20e-41 139
Msa0084720 MtrunA17_Chr2g0276931 40.909 154 90 1 34 187 11 163 1.06e-38 132
Msa0084720 MtrunA17_Chr2g0327911 42.675 157 87 3 33 187 16 171 2.13e-37 129
Msa0084720 MtrunA17_Chr8g0384311 39.766 171 99 4 21 189 2 170 5.30e-37 128
Msa0084720 MtrunA17_Chr8g0392931 45.455 154 83 1 34 187 16 168 5.77e-36 125
Msa0084720 MtrunA17_Chr3g0130271 42.138 159 87 5 34 189 14 170 4.78e-35 123
Msa0084720 MtrunA17_Chr7g0265001 38.272 162 97 3 30 189 14 174 1.67e-34 121
Msa0084720 MtrunA17_Chr1g0159481 39.873 158 91 4 34 189 19 174 1.99e-33 119
Msa0084720 MtrunA17_Chr1g0180291 38.037 163 95 5 30 189 12 171 1.64e-32 116
Msa0084720 MtrunA17_Chr1g0197331 40.000 160 90 5 34 189 17 174 9.74e-32 114
Msa0084720 MtrunA17_Chr4g0034871 34.524 168 102 4 33 193 9 175 1.58e-28 106
Msa0084720 MtrunA17_Chr1g0201121 37.037 162 94 4 33 187 9 169 1.77e-28 105
Msa0084720 MtrunA17_Chr2g0331691 34.132 167 102 4 29 188 7 172 6.89e-28 104
Msa0084720 MtrunA17_Chr6g0466301 35.802 162 96 4 33 187 9 169 1.76e-27 103
Msa0084720 MtrunA17_Chr6g0465491 35.802 162 96 4 33 187 9 169 1.76e-27 103
Msa0084720 MtrunA17_Chr8g0383261 34.940 166 100 5 29 187 9 173 2.97e-27 102
Msa0084720 MtrunA17_Chr4g0004661 33.533 167 103 4 29 188 61 226 9.64e-27 102
Msa0084720 MtrunA17_Chr3g0117931 36.047 172 93 7 33 191 9 176 7.02e-26 99.4
Msa0084720 MtrunA17_Chr2g0325101 34.302 172 96 7 33 191 7 174 5.20e-24 94.0
Msa0084720 MtrunA17_Chr6g0486041 32.749 171 100 6 33 191 7 174 2.26e-23 92.8
Msa0084720 MtrunA17_Chr4g0037021 33.721 172 97 7 33 191 7 174 2.37e-23 92.4
Msa0084720 MtrunA17_Chr8g0371501 33.721 172 97 7 33 191 7 174 7.06e-23 91.3
Msa0084720 MtrunA17_Chr5g0405791 32.558 172 99 7 33 191 7 174 1.32e-22 90.5
Msa0084720 MtrunA17_Chr4g0046211 36.434 129 76 5 33 159 7 131 6.98e-22 87.0
Msa0084720 MtrunA17_Chr2g0331841 59.322 59 24 0 101 159 1 59 6.08e-20 80.5
Msa0084720 MtrunA17_Chr3g0138121 30.519 154 103 4 34 187 15 164 1.52e-18 80.5
Msa0084720 MtrunA17_Chr3g0138111 30.519 154 103 4 34 187 15 164 1.86e-18 80.1
Msa0084720 MtrunA17_Chr3g0138101 30.519 154 103 4 34 187 15 164 1.92e-18 80.1
Msa0084720 MtrunA17_Chr6g0466161 31.544 149 88 5 49 187 7 151 6.97e-15 70.1
Msa0084720 MtrunA17_Chr6g0465471 31.544 149 88 5 49 187 7 151 7.04e-15 70.1
Msa0084720 MtrunA17_Chr6g0466431 33.981 103 58 2 29 131 5 97 2.65e-14 66.2
Msa0084720 MtrunA17_Chr6g0465611 33.981 103 58 2 29 131 5 97 2.65e-14 66.2
Msa0084720 MtrunA17_Chr5g0443631 26.257 179 121 5 21 192 93 267 4.05e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084720 AT3G54840.2 87.302 189 23 1 1 188 1 189 3.10e-119 336
Msa0084720 AT3G54840.1 86.842 190 24 1 1 189 1 190 5.41e-119 336
Msa0084720 AT3G54840.3 92.903 155 11 0 35 189 2 156 2.85e-105 300
Msa0084720 AT4G19640.1 59.748 159 63 1 29 187 7 164 5.24e-68 207
Msa0084720 AT5G45130.1 59.748 159 63 1 29 187 7 164 6.11e-67 204
Msa0084720 AT5G45130.2 59.868 152 60 1 36 187 22 172 4.55e-63 194
Msa0084720 AT4G19640.2 59.542 131 52 1 29 159 7 136 2.30e-53 168
Msa0084720 AT4G19640.3 59.542 131 52 1 29 159 7 136 1.23e-52 167
Msa0084720 AT1G09630.1 47.879 165 85 1 34 198 14 177 3.75e-51 164
Msa0084720 AT1G07410.1 47.273 165 86 1 34 198 14 177 1.52e-49 160
Msa0084720 AT4G39990.1 45.912 159 85 1 34 192 19 176 1.28e-48 158
Msa0084720 AT5G59150.1 45.455 165 89 1 34 198 14 177 4.83e-48 157
Msa0084720 AT3G46830.1 45.455 165 89 1 34 198 14 177 4.94e-48 157
Msa0084720 AT3G46830.2 45.455 165 89 1 34 198 14 177 4.94e-48 157
Msa0084720 AT3G15060.1 47.799 159 82 1 34 192 15 172 8.22e-48 156
Msa0084720 AT5G65270.1 44.848 165 90 1 34 198 19 182 9.56e-48 156
Msa0084720 AT1G16920.1 46.541 159 84 1 34 192 15 172 1.92e-47 155
Msa0084720 AT5G45750.1 43.636 165 92 1 34 198 15 178 3.27e-47 154
Msa0084720 AT5G10260.1 45.860 157 84 1 32 188 9 164 4.71e-47 154
Msa0084720 AT5G60860.1 45.455 165 89 1 34 198 15 178 6.88e-47 154
Msa0084720 AT4G18430.1 45.283 159 86 1 34 192 15 172 8.73e-47 153
Msa0084720 AT2G22290.1 46.154 156 83 1 32 187 9 163 1.55e-46 152
Msa0084720 AT3G07410.1 47.742 155 80 1 34 188 14 167 2.31e-46 152
Msa0084720 AT2G43130.1 45.806 155 83 1 34 188 14 167 5.94e-46 151
Msa0084720 AT5G47960.1 43.636 165 92 1 34 198 17 180 6.68e-46 151
Msa0084720 AT3G12160.1 43.030 165 93 1 34 198 17 180 7.72e-46 151
Msa0084720 AT4G35860.1 41.558 154 89 1 34 187 8 160 7.96e-46 150
Msa0084720 AT4G17160.1 42.308 156 89 1 32 187 6 160 9.36e-46 150
Msa0084720 AT2G33870.1 42.529 174 99 1 25 198 6 178 9.95e-46 150
Msa0084720 AT2G44610.1 46.154 156 83 1 32 187 9 163 1.04e-45 150
Msa0084720 AT1G28550.1 42.529 174 99 1 25 198 6 178 1.12e-45 150
Msa0084720 AT4G39890.1 43.671 158 87 2 32 188 9 165 1.44e-45 150
Msa0084720 AT1G06400.1 43.030 165 93 1 34 198 15 178 1.48e-45 150
Msa0084720 AT4G18800.1 41.818 165 95 1 34 198 15 178 2.40e-45 150
Msa0084720 AT4G17170.1 41.558 154 89 1 34 187 8 160 4.32e-45 149
Msa0084720 AT5G64990.1 45.455 154 83 1 34 187 9 161 2.07e-44 147
Msa0084720 AT3G53610.2 46.154 156 82 2 33 187 16 170 1.19e-43 145
Msa0084720 AT3G53610.3 46.154 156 82 2 33 187 16 170 1.19e-43 145
Msa0084720 AT3G53610.1 46.154 156 82 2 33 187 16 170 1.19e-43 145
Msa0084720 AT5G47520.1 43.750 160 89 1 34 193 16 174 1.56e-43 145
Msa0084720 AT3G46060.2 45.513 156 83 2 33 187 16 170 1.68e-43 145
Msa0084720 AT3G46060.3 45.513 156 83 2 33 187 16 170 1.68e-43 145
Msa0084720 AT3G46060.1 45.513 156 83 2 33 187 16 170 1.68e-43 145
Msa0084720 AT1G05810.1 43.750 160 89 1 34 193 14 172 2.23e-43 145
Msa0084720 AT5G59840.1 45.513 156 83 2 33 187 16 170 3.62e-43 144
Msa0084720 AT1G05810.2 43.750 160 89 1 34 193 60 218 4.38e-43 145
Msa0084720 AT2G31680.1 41.143 175 99 2 19 193 2 172 4.94e-43 144
Msa0084720 AT1G02130.1 44.156 154 85 1 34 187 10 162 2.80e-42 141
Msa0084720 AT1G18200.1 46.753 154 81 1 34 187 15 167 3.02e-42 142
Msa0084720 AT4G17530.1 43.506 154 86 1 34 187 10 162 4.98e-42 141
Msa0084720 AT5G47200.1 43.506 154 86 1 34 187 10 162 9.23e-42 140
Msa0084720 AT5G64990.2 43.478 161 83 2 34 187 9 168 1.36e-41 140
Msa0084720 AT1G01200.1 45.238 168 90 2 34 200 30 196 4.84e-41 139
Msa0084720 AT3G09900.1 44.231 156 85 2 33 187 16 170 1.88e-39 135
Msa0084720 AT3G11730.1 42.208 154 88 1 34 187 10 162 2.44e-39 134
Msa0084720 AT1G73640.1 44.156 154 85 1 34 187 15 167 2.94e-39 135
Msa0084720 AT5G03520.1 44.231 156 85 2 33 187 16 170 9.40e-39 133
Msa0084720 AT1G43890.3 38.922 167 98 4 25 189 6 170 1.24e-34 122
Msa0084720 AT1G43890.1 38.922 167 98 4 25 189 6 170 1.24e-34 122
Msa0084720 AT1G43890.2 38.922 167 98 4 25 189 6 170 1.24e-34 122
Msa0084720 AT5G59150.2 45.763 118 64 0 81 198 9 126 8.26e-34 119
Msa0084720 AT4G35860.2 43.636 110 62 0 78 187 5 114 1.19e-32 115
Msa0084720 AT5G03530.2 36.527 167 102 4 25 189 6 170 1.10e-31 114
Msa0084720 AT5G03530.1 36.527 167 102 4 25 189 6 170 1.10e-31 114
Msa0084720 AT3G18820.1 35.714 168 100 4 33 193 9 175 6.41e-30 110
Msa0084720 AT1G22740.1 37.037 162 94 4 33 187 9 169 1.39e-29 108
Msa0084720 AT2G21880.1 35.802 162 96 4 33 187 10 170 3.39e-29 108
Msa0084720 AT3G09910.3 37.126 167 101 4 25 189 6 170 3.64e-28 105
Msa0084720 AT3G09910.1 37.126 167 101 4 25 189 6 170 3.64e-28 105
Msa0084720 AT3G09910.2 37.126 167 101 4 25 189 6 170 3.64e-28 105
Msa0084720 AT3G09910.5 37.126 167 101 4 25 189 6 170 4.50e-28 105
Msa0084720 AT3G09910.4 37.126 167 101 4 25 189 6 170 4.50e-28 105
Msa0084720 AT1G49300.2 35.185 162 97 4 33 187 9 169 6.15e-28 105
Msa0084720 AT1G49300.1 35.185 162 97 4 33 187 9 169 6.15e-28 105
Msa0084720 AT1G52280.1 34.731 167 101 4 29 188 5 170 1.06e-27 104
Msa0084720 AT4G09720.1 35.185 162 97 4 33 187 9 169 2.03e-27 103
Msa0084720 AT5G03520.2 42.500 120 67 2 69 187 42 160 1.37e-26 101
Msa0084720 AT3G16100.1 34.132 167 102 4 29 188 5 170 2.01e-26 100
Msa0084720 AT5G62880.1 35.000 180 99 8 33 198 9 184 2.03e-25 98.6
Msa0084720 AT3G48040.1 35.465 172 94 7 33 191 9 176 1.13e-24 96.7
Msa0084720 AT4G09720.4 33.929 168 96 5 33 187 9 174 1.28e-24 96.3
Msa0084720 AT2G44690.1 35.465 172 94 7 33 191 19 186 3.75e-24 95.1
Msa0084720 AT4G09720.3 32.948 173 97 5 33 187 9 180 5.83e-24 94.7
Msa0084720 AT3G51300.1 34.302 172 96 7 33 191 7 174 6.60e-24 94.4
Msa0084720 AT1G75840.1 34.302 172 96 7 33 191 7 174 8.50e-24 94.0
Msa0084720 AT5G39620.1 31.902 163 103 4 32 187 5 166 8.52e-24 94.0
Msa0084720 AT1G20090.1 34.302 172 96 7 33 191 6 173 1.13e-23 93.6
Msa0084720 AT4G35020.1 34.884 172 95 7 33 191 7 174 1.44e-23 93.2
Msa0084720 AT4G35020.2 34.884 172 95 7 33 191 7 174 1.44e-23 93.2
Msa0084720 AT4G35020.3 34.884 172 95 7 33 191 7 174 1.44e-23 93.2
Msa0084720 AT5G45970.1 34.302 172 96 7 33 191 7 174 4.93e-23 92.0
Msa0084720 AT2G17800.2 33.721 172 97 7 33 191 7 174 8.15e-23 91.3
Msa0084720 AT2G17800.1 33.721 172 97 7 33 191 7 174 8.15e-23 91.3
Msa0084720 AT4G35950.1 33.140 172 98 7 33 191 7 174 2.96e-22 89.7
Msa0084720 AT4G28950.1 31.953 169 102 6 33 191 7 172 4.32e-22 89.7
Msa0084720 AT3G48040.2 36.250 160 85 7 33 179 9 164 6.43e-22 88.6
Msa0084720 AT5G62880.2 35.625 160 86 7 33 179 9 164 1.10e-21 88.2
Msa0084720 AT2G21880.4 34.028 144 87 4 51 187 3 145 1.24e-21 88.2
Msa0084720 AT2G21880.3 34.028 144 87 4 51 187 3 145 1.24e-21 88.2
Msa0084720 AT5G55080.1 29.870 154 104 4 34 187 15 164 2.74e-20 85.5
Msa0084720 AT2G21880.2 29.630 162 98 4 33 187 10 162 1.68e-19 82.8
Msa0084720 AT5G46025.1 42.000 100 52 2 103 196 14 113 5.68e-19 79.0
Msa0084720 AT4G09720.6 34.586 133 79 4 62 187 4 135 9.74e-19 80.1
Msa0084720 AT4G09720.5 34.586 133 79 4 62 187 4 135 9.74e-19 80.1
Msa0084720 AT4G09720.2 34.586 133 79 4 62 187 4 135 9.74e-19 80.1
Msa0084720 AT4G35020.4 40.171 117 64 5 33 147 7 119 1.50e-18 79.0
Msa0084720 AT4G35020.5 40.171 117 64 5 33 147 7 119 1.50e-18 79.0
Msa0084720 AT5G20020.1 30.519 154 103 4 34 187 15 164 2.00e-18 80.5
Msa0084720 AT5G20010.1 30.519 154 103 4 34 187 15 164 2.54e-18 80.1
Msa0084720 AT5G55190.1 30.519 154 103 4 34 187 15 164 2.67e-18 80.1
Msa0084720 AT3G51290.2 34.127 126 70 4 78 191 651 775 1.71e-15 74.7

Find 69 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATGTTTGTTTAATTATT+TGG 0.081093 1_2:+64262382 None:intergenic
TGTGCTTTGCTGAAAGATTC+TGG 0.171304 1_2:+64260454 None:intergenic
CTTGTCCTCTTAGGTGATTC+TGG 0.190714 1_2:-64261000 Msa0084720:CDS
ACCAATGCCATCACTATATC+AGG 0.244974 1_2:+64259487 None:intergenic
ATTGAGGGTTCGTTCGTTAA+TGG 0.276554 1_2:+64262271 None:intergenic
TCCTCCACCATTCTCGGGAC+TGG 0.283720 1_2:+64261876 None:intergenic
CAACAGTCAAGTTTGAAATA+TGG 0.289384 1_2:-64260714 Msa0084720:CDS
GAGAAGGAAGCACAATAATC+TGG 0.326721 1_2:+64262238 None:intergenic
TGAACACAGCTTGTCCTCTT+AGG 0.360886 1_2:-64261009 Msa0084720:intron
TATATTATCCGCTGTCTTTG+CGG 0.366407 1_2:+64259279 None:intergenic
CCTCCACCATTCTCGGGACT+GGG 0.380240 1_2:+64261877 None:intergenic
GTGCTTTGCTGAAAGATTCT+GGG 0.381291 1_2:+64260455 None:intergenic
GTCTTGTCCTCCACCATTCT+CGG 0.385898 1_2:+64261870 None:intergenic
GGTTGCGGCTCCTCCTTTCC+AGG 0.386599 1_2:-64262129 Msa0084720:intron
AACAGTCAAGTTTGAAATAT+GGG 0.387955 1_2:-64260713 Msa0084720:CDS
ATCGTATAATTAAGAAACTA+TGG 0.401032 1_2:-64262422 Msa0084720:five_prime_UTR
CTTTCAGCAAAGCACAGTAC+TGG 0.403439 1_2:-64260447 Msa0084720:CDS
CTGTTTCAGGTATGCTGCAT+TGG 0.410169 1_2:-64260533 Msa0084720:intron
CATATTCTTACCTTGGATGT+TGG 0.419450 1_2:+64260928 None:intergenic
CTCTTAGGTGATTCTGGTGT+TGG 0.430297 1_2:-64260994 Msa0084720:CDS
CATGTCAGACACATCGCCTT+TGG 0.441102 1_2:-64256463 Msa0084720:CDS
CAAAGCACAGTACTGGGTTA+AGG 0.458693 1_2:-64260440 Msa0084720:intron
TCTGGGAAAGTTGAAATTGA+GGG 0.462345 1_2:+64262256 None:intergenic
ATCTGGGAAAGTTGAAATTG+AGG 0.469273 1_2:+64262255 None:intergenic
TCATCAATGTGGCATGGAAG+TGG 0.476170 1_2:-64262348 Msa0084720:five_prime_UTR
TCTTGTCCTCCACCATTCTC+GGG 0.488194 1_2:+64261871 None:intergenic
TCTTGCTTTCCTTGAGGACG+AGG 0.495254 1_2:+64262321 None:intergenic
TAATATAAACGAACTGTTTG+AGG 0.496118 1_2:-64259263 Msa0084720:intron
GTCAGACACATCGCCTTTGG+TGG 0.505895 1_2:-64256460 Msa0084720:CDS
ATTGTTCTGCGATTTGTTCG+TGG 0.511021 1_2:-64260961 Msa0084720:CDS
AGATGGAGAATTGGTTTGGT+TGG 0.511379 1_2:+64262209 None:intergenic
AGCCGATCTTCACGAGAAGC+GGG 0.511764 1_2:-64259455 Msa0084720:CDS
AAGCCGATCTTCACGAGAAG+CGG 0.512350 1_2:-64259456 Msa0084720:CDS
AGCCGCAACCCATGGTCGTT+AGG 0.513242 1_2:+64262142 None:intergenic
GAAGCGGGAGGTTGCTGTTG+AGG 0.528095 1_2:-64259440 Msa0084720:intron
CACCTAACGACCATGGGTTG+CGG 0.528973 1_2:-64262144 Msa0084720:exon
AGAAGGAAGCACAATAATCT+GGG 0.536373 1_2:+64262239 None:intergenic
CCCAGTCCCGAGAATGGTGG+AGG 0.543062 1_2:-64261877 Msa0084720:CDS
GGTCGACCCAGTCCCGAGAA+TGG 0.543531 1_2:-64261883 Msa0084720:CDS
TTTCAGCAAAGCACAGTACT+GGG 0.546830 1_2:-64260446 Msa0084720:CDS
CTCCCGCTTCTCGTGAAGAT+CGG 0.553158 1_2:+64259453 None:intergenic
TTGTAATGTAAGGTAACTGT+TGG 0.553827 1_2:-64260778 Msa0084720:intron
CAACACCAGAATCACCTAAG+AGG 0.554983 1_2:+64260995 None:intergenic
TGTTTCCGTGAAGGATGGCA+TGG 0.556519 1_2:-64259341 Msa0084720:intron
CAGCATCACCTAACGACCAT+GGG 0.559136 1_2:-64262150 Msa0084720:exon
CGTATATCTTGCTTTCCTTG+AGG 0.569020 1_2:+64262315 None:intergenic
AAAGGAGGAGCCGCAACCCA+TGG 0.575169 1_2:+64262134 None:intergenic
TTCTGGGCTTGTTATATCGT+AGG 0.577675 1_2:+64260471 None:intergenic
GATAGGGATTCAAGGCAGCT+AGG 0.578929 1_2:-64261904 Msa0084720:CDS
GCAGCATCACCTAACGACCA+TGG 0.588907 1_2:-64262151 Msa0084720:exon
CAAAGGCGATGTGTCTGACA+TGG 0.591254 1_2:+64256464 None:intergenic
GTTTGGTTGGTTGTGAGAGA+AGG 0.598289 1_2:+64262222 None:intergenic
CGACCCAGTCCCGAGAATGG+TGG 0.607857 1_2:-64261880 Msa0084720:CDS
AGTGGAAATCCTCGTCCTCA+AGG 0.608221 1_2:-64262330 Msa0084720:five_prime_UTR
GATATAGTGATGGCATTGGT+TGG 0.609417 1_2:-64259484 Msa0084720:CDS
CCCTGATATAGTGATGGCAT+TGG 0.610235 1_2:-64259488 Msa0084720:CDS
GCATGATCAACAACCACCAA+AGG 0.624635 1_2:+64256447 None:intergenic
TGGAAGCCCTGATATAGTGA+TGG 0.626540 1_2:-64259494 Msa0084720:CDS
ATGGACTATGCAGAGAAGAA+CGG 0.630459 1_2:-64259322 Msa0084720:CDS
CCAATGCCATCACTATATCA+GGG 0.632375 1_2:+64259488 None:intergenic
TTTGAAATATGGGATACCGC+TGG 0.632905 1_2:-64260703 Msa0084720:CDS
TCAGTTTGATCCAACATCCA+AGG 0.640164 1_2:-64260938 Msa0084720:intron
GGGATACCGCTGGTCAAGAG+AGG 0.645477 1_2:-64260693 Msa0084720:intron
ACTGTATTATCGTGGTGCAG+CGG 0.654941 1_2:-64260506 Msa0084720:CDS
AGAGACATCCGCAAAGACAG+CGG 0.663905 1_2:-64259287 Msa0084720:CDS
CGATCTTCACGAGAAGCGGG+AGG 0.679341 1_2:-64259452 Msa0084720:CDS
AAGTTACCTCTCTTGACCAG+CGG 0.701831 1_2:+64260687 None:intergenic
TTGGCACCACTGTATTATCG+TGG 0.723087 1_2:-64260514 Msa0084720:CDS
GCTGCACCACGATAATACAG+TGG 0.758366 1_2:+64260508 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATGTTTGTTTAATTATT+TGG + chr1_2:64256481-64256500 None:intergenic 10.0%
!! TCATTAAAATTATTTGAATA+GGG + chr1_2:64257116-64257135 None:intergenic 10.0%
!! ATCATTAAAATTATTTGAAT+AGG + chr1_2:64257117-64257136 None:intergenic 10.0%
!! CATATATTCTATAAAATATA+TGG + chr1_2:64257649-64257668 None:intergenic 10.0%
!! TGAAATATATGTAAATATTT+AGG - chr1_2:64259330-64259349 Msa0084720:CDS 10.0%
!!! TGATTTTTTTTTTCATTGTA+TGG - chr1_2:64256823-64256842 Msa0084720:intron 15.0%
!! TAGAAGAAATTATTGAATTT+AGG - chr1_2:64256893-64256912 Msa0084720:intron 15.0%
!! AGAAGAAATTATTGAATTTA+GGG - chr1_2:64256894-64256913 Msa0084720:intron 15.0%
!!! GTTTTCAAAATTAAAGAATT+TGG + chr1_2:64257051-64257070 None:intergenic 15.0%
!!! TTTTACAAAAGACTAATTAT+GGG + chr1_2:64257596-64257615 None:intergenic 15.0%
!! AGATTAAACTAAAATATTTG+AGG + chr1_2:64257797-64257816 None:intergenic 15.0%
!!! CTATATTTTAATTTCTTGTT+TGG - chr1_2:64258467-64258486 Msa0084720:intron 15.0%
!! TACAATGATTATAAATGAAA+TGG + chr1_2:64258557-64258576 None:intergenic 15.0%
!! TTATCAAAAGAATAGAAAAT+AGG - chr1_2:64259171-64259190 Msa0084720:intron 15.0%
!!! TTTAAAATTGAATAACTGAA+AGG + chr1_2:64259641-64259660 None:intergenic 15.0%
!!! ATTTTGATTTTTATTGAAGT+TGG - chr1_2:64259851-64259870 Msa0084720:intron 15.0%
!!! TTTTGATTTTTATTGAAGTT+GGG - chr1_2:64259852-64259871 Msa0084720:intron 15.0%
!!! ATAATTAAATGGATTTTTGT+AGG + chr1_2:64260228-64260247 None:intergenic 15.0%
!! TTGGAAAAGATATAATTAAA+TGG + chr1_2:64260239-64260258 None:intergenic 15.0%
!! TGAATAACAACAATTAAATA+TGG + chr1_2:64261461-64261480 None:intergenic 15.0%
!! ATCAACTTGTAATAATATTA+TGG - chr1_2:64262270-64262289 Msa0084720:five_prime_UTR 15.0%
!!! AAAAGTTGAAAAATTTTACC+TGG + chr1_2:64256752-64256771 None:intergenic 20.0%
!!! TATCAATTTTCTTTCTCTAT+GGG - chr1_2:64257160-64257179 Msa0084720:intron 20.0%
!! ATGTTATACTTTCTATGATA+TGG - chr1_2:64257460-64257479 Msa0084720:intron 20.0%
!!! GTTTTACAAAAGACTAATTA+TGG + chr1_2:64257597-64257616 None:intergenic 20.0%
!!! AATTAGTCTTTTGTAAAACT+TGG - chr1_2:64257598-64257617 Msa0084720:intron 20.0%
!!! ATATGATTTTGATTTGAAGT+CGG - chr1_2:64257664-64257683 Msa0084720:intron 20.0%
!! TATTATTGGGAATTAATTTC+TGG + chr1_2:64257720-64257739 None:intergenic 20.0%
!!! CATTTTTAATGGCTATTATT+GGG + chr1_2:64257733-64257752 None:intergenic 20.0%
!!! TCATTTTTAATGGCTATTAT+TGG + chr1_2:64257734-64257753 None:intergenic 20.0%
!! ATAATAGCCATTAAAAATGA+AGG - chr1_2:64257734-64257753 Msa0084720:intron 20.0%
!! TAATAGCCATTAAAAATGAA+GGG - chr1_2:64257735-64257754 Msa0084720:intron 20.0%
!!! GTAAATTTTCCTAATATTGA+AGG - chr1_2:64257980-64257999 Msa0084720:intron 20.0%
!!! TTTTTAGACTTTGTAATGTA+AGG - chr1_2:64258072-64258091 Msa0084720:intron 20.0%
!! GTAGATAGTTATACTATTTA+AGG + chr1_2:64259457-64259476 None:intergenic 20.0%
!!! GATTATTTTCTTTTTTTCAC+AGG + chr1_2:64259827-64259846 None:intergenic 20.0%
!!! ATTATATCTTTTCCAAACAA+AGG - chr1_2:64260243-64260262 Msa0084720:intron 20.0%
!! AACCAATAAATAAACATTCT+AGG - chr1_2:64260307-64260326 Msa0084720:intron 20.0%
!! TATAAAAAAATGTGTACTTG+AGG - chr1_2:64260847-64260866 Msa0084720:intron 20.0%
!! ATAAAAAAATGTGTACTTGA+GGG - chr1_2:64260848-64260867 Msa0084720:intron 20.0%
!! CAAAATTCTAAATTCATGTT+GGG - chr1_2:64261522-64261541 Msa0084720:intron 20.0%
!!! GTATTATTCAAAGATTTTGT+AGG - chr1_2:64262028-64262047 Msa0084720:intron 20.0%
!! CTTATACATTACAATTTGAA+GGG + chr1_2:64262200-64262219 None:intergenic 20.0%
!! ACTTATACATTACAATTTGA+AGG + chr1_2:64262201-64262220 None:intergenic 20.0%
!! ACTTGTAATAATATTATGGA+TGG - chr1_2:64262274-64262293 Msa0084720:five_prime_UTR 20.0%
!!! TTCCTTTTTTTTCATCAATG+TGG - chr1_2:64256501-64256520 Msa0084720:intron 25.0%
! TGTAAAAAAAGATGGAGAAT+TGG + chr1_2:64256663-64256682 None:intergenic 25.0%
!! TTGAAAAATTTTACCTGGAA+AGG + chr1_2:64256747-64256766 None:intergenic 25.0%
!! TTTTGACATTTAGCTGAAAA+GGG - chr1_2:64256787-64256806 Msa0084720:intron 25.0%
!! TTATTGAATTTAGGGTTTGA+CGG - chr1_2:64256902-64256921 Msa0084720:intron 25.0%
!! TTGATTTTGTGTTTTCAGAT+AGG - chr1_2:64256939-64256958 Msa0084720:intron 25.0%
!! TGATTTTGTGTTTTCAGATA+GGG - chr1_2:64256940-64256959 Msa0084720:intron 25.0%
! TAGAGAAAGAAAATTGATAC+AGG + chr1_2:64257159-64257178 None:intergenic 25.0%
!! GTATCAATTTTCTTTCTCTA+TGG - chr1_2:64257159-64257178 Msa0084720:intron 25.0%
!!! TGAGTAACTTTTTTACAAGA+TGG - chr1_2:64257235-64257254 Msa0084720:intron 25.0%
!! GTTTAAAGCACAGTTTATTT+CGG - chr1_2:64257305-64257324 Msa0084720:intron 25.0%
!!! TTTTAGTTAACTGTCCTATA+AGG - chr1_2:64257378-64257397 Msa0084720:intron 25.0%
! AAAATTATACCAGACCTTAT+AGG + chr1_2:64257395-64257414 None:intergenic 25.0%
! AAGTGAATGCATAATTACAT+TGG + chr1_2:64257696-64257715 None:intergenic 25.0%
!!! CTAAATCCCTTCATTTTTAA+TGG + chr1_2:64257744-64257763 None:intergenic 25.0%
!! CTAAAATATTTGAGGTATGA+AGG + chr1_2:64257789-64257808 None:intergenic 25.0%
! TTTCCTAATATTGAAGGAAT+TGG - chr1_2:64257986-64258005 Msa0084720:intron 25.0%
! TAACCAATTCCTTCAATATT+AGG + chr1_2:64257992-64258011 None:intergenic 25.0%
! GATTTAATGCTTACTAGATA+TGG - chr1_2:64258021-64258040 Msa0084720:intron 25.0%
! ATATGGTAATTATTCCATGT+TGG - chr1_2:64258038-64258057 Msa0084720:intron 25.0%
! AAATTATAAGAACTCCAACA+TGG + chr1_2:64258055-64258074 None:intergenic 25.0%
!! AACAGTCAAGTTTGAAATAT+GGG - chr1_2:64258147-64258166 Msa0084720:intron 25.0%
! TACATCTTGAAATAAGAAAG+GGG + chr1_2:64258276-64258295 None:intergenic 25.0%
! GTACATCTTGAAATAAGAAA+GGG + chr1_2:64258277-64258296 None:intergenic 25.0%
! TGTACATCTTGAAATAAGAA+AGG + chr1_2:64258278-64258297 None:intergenic 25.0%
! TACATATTATACCCATTAAG+AGG + chr1_2:64258642-64258661 None:intergenic 25.0%
! TATAATATGTAGAGAAAAGG+TGG - chr1_2:64258651-64258670 Msa0084720:intron 25.0%
!!! AACAAAATTTGTTTTTCACG+AGG + chr1_2:64258835-64258854 None:intergenic 25.0%
!!! TGATTAATAAAACGGGTTTT+TGG + chr1_2:64258959-64258978 None:intergenic 25.0%
! TTCACTGTGATTAATAAAAC+GGG + chr1_2:64258966-64258985 None:intergenic 25.0%
! CTTCACTGTGATTAATAAAA+CGG + chr1_2:64258967-64258986 None:intergenic 25.0%
! TATCTTGTAATGAGAATGAT+TGG + chr1_2:64259137-64259156 None:intergenic 25.0%
!! AACAAAAAGCATACTATATC+AGG + chr1_2:64259503-64259522 None:intergenic 25.0%
! TAATATAAACGAACTGTTTG+AGG - chr1_2:64259597-64259616 Msa0084720:intron 25.0%
!!! TAGTAGTTATGTTAGTTTTC+AGG + chr1_2:64259789-64259808 None:intergenic 25.0%
!! ATTTTTATTGAAGTTGGGAA+TGG - chr1_2:64259857-64259876 Msa0084720:intron 25.0%
!!! ATTATTGACTTACAGATCTT+CGG - chr1_2:64260019-64260038 Msa0084720:intron 25.0%
!!! CTGTTTTTAACTTTTGTCTT+TGG - chr1_2:64260075-64260094 Msa0084720:intron 25.0%
!!! TAAATGGATTTTTGTAGGAT+GGG + chr1_2:64260223-64260242 None:intergenic 25.0%
!!! TTAAATGGATTTTTGTAGGA+TGG + chr1_2:64260224-64260243 None:intergenic 25.0%
! CTAATTTCTGAATAACAAAG+CGG + chr1_2:64260522-64260541 None:intergenic 25.0%
!! AATTAGCTACAGATTAGTTA+AGG - chr1_2:64260536-64260555 Msa0084720:intron 25.0%
!!! AATTTGATTTGAGAACTTGA+TGG + chr1_2:64260588-64260607 None:intergenic 25.0%
! TCAAATCAAATTCTGACATT+TGG - chr1_2:64260596-64260615 Msa0084720:intron 25.0%
! ATAACAGTTCTATAGAATCT+CGG + chr1_2:64260712-64260731 None:intergenic 25.0%
! GCAAAATTCTAAATTCATGT+TGG - chr1_2:64261521-64261540 Msa0084720:intron 25.0%
!! TGCAATATTACACATGTTTT+TGG - chr1_2:64261712-64261731 Msa0084720:intron 25.0%
!!! AATATTACACATGTTTTTGG+TGG - chr1_2:64261715-64261734 Msa0084720:intron 25.0%
! TGCTTTAACATGTGTAATAT+TGG + chr1_2:64261814-64261833 None:intergenic 25.0%
! TACGATTTCATATTCAATGT+AGG - chr1_2:64262370-64262389 Msa0084720:five_prime_UTR 25.0%
TGCCACATTGATGAAAAAAA+AGG + chr1_2:64256506-64256525 None:intergenic 30.0%
!!! TTTTTTTCATCAATGTGGCA+TGG - chr1_2:64256506-64256525 Msa0084720:intron 30.0%
AAAAAGATGGAGAATTGGTT+TGG + chr1_2:64256658-64256677 None:intergenic 30.0%
!!! TCCATCTTTTTTTACATCAG+CGG - chr1_2:64256667-64256686 Msa0084720:intron 30.0%
! AAAAATTTTACCTGGAAAGG+AGG + chr1_2:64256744-64256763 None:intergenic 30.0%
! CTTTTGACATTTAGCTGAAA+AGG - chr1_2:64256786-64256805 Msa0084720:intron 30.0%
TTTGACATTTAGCTGAAAAG+GGG - chr1_2:64256788-64256807 Msa0084720:intron 30.0%
!!! ATTTTGGGTTTGTGGTTTAA+TGG - chr1_2:64256858-64256877 Msa0084720:intron 30.0%
!!! TTTTGGGTTTGTGGTTTAAT+GGG - chr1_2:64256859-64256878 Msa0084720:intron 30.0%
! TATTGAATTTAGGGTTTGAC+GGG - chr1_2:64256903-64256922 Msa0084720:intron 30.0%
!!! AACATGTTTTTTGTTGCAGA+TGG - chr1_2:64257068-64257087 Msa0084720:intron 30.0%
! TAATTAGTTCAGCTTTTGCT+TGG - chr1_2:64257209-64257228 Msa0084720:intron 30.0%
TACAAGATGGTAAAAGACAA+AGG - chr1_2:64257248-64257267 Msa0084720:intron 30.0%
AATAATTCGCTTCATTCCAA+AGG + chr1_2:64257344-64257363 None:intergenic 30.0%
TCTTGAAAATATGCACAACA+TGG - chr1_2:64257621-64257640 Msa0084720:intron 30.0%
TTGTAATGTAAGGTAACTGT+TGG - chr1_2:64258082-64258101 Msa0084720:intron 30.0%
! CAACAGTCAAGTTTGAAATA+TGG - chr1_2:64258146-64258165 Msa0084720:intron 30.0%
AACAAAATAAGCGCTTGTAA+TGG + chr1_2:64258239-64258258 None:intergenic 30.0%
ACATCTTGAAATAAGAAAGG+GGG + chr1_2:64258275-64258294 None:intergenic 30.0%
TATGTTGTATTCACTGATGT+TGG + chr1_2:64258522-64258541 None:intergenic 30.0%
TTATACCCATTAAGAGGTAA+GGG + chr1_2:64258636-64258655 None:intergenic 30.0%
ATTATACCCATTAAGAGGTA+AGG + chr1_2:64258637-64258656 None:intergenic 30.0%
GGGTATAATATGTAGAGAAA+AGG - chr1_2:64258648-64258667 Msa0084720:intron 30.0%
TATGATCAACTCTTCTTACT+GGG + chr1_2:64258707-64258726 None:intergenic 30.0%
GAATAGCTCAAAATTTGTAC+AGG - chr1_2:64258727-64258746 Msa0084720:intron 30.0%
ACAGGAAAACCAAGAATAAA+TGG - chr1_2:64258745-64258764 Msa0084720:intron 30.0%
ATTGAGTTCTATCAAACATG+GGG + chr1_2:64258783-64258802 None:intergenic 30.0%
CATTGAGTTCTATCAAACAT+GGG + chr1_2:64258784-64258803 None:intergenic 30.0%
ACATTGAGTTCTATCAAACA+TGG + chr1_2:64258785-64258804 None:intergenic 30.0%
!! AAAATTTGTTTTTCACGAGG+TGG + chr1_2:64258832-64258851 None:intergenic 30.0%
GTTTATTTCAATCTCTGTAG+GGG + chr1_2:64259045-64259064 None:intergenic 30.0%
GGTTTATTTCAATCTCTGTA+GGG + chr1_2:64259046-64259065 None:intergenic 30.0%
CTACAGAGATTGAAATAAAC+CGG - chr1_2:64259045-64259064 Msa0084720:intron 30.0%
TACAGAGATTGAAATAAACC+GGG - chr1_2:64259046-64259065 Msa0084720:intron 30.0%
ATTTAGGAGCTACAAAAACA+TGG - chr1_2:64259346-64259365 Msa0084720:intron 30.0%
TGAAAGGATGTAAACATCAA+AGG + chr1_2:64259625-64259644 None:intergenic 30.0%
TAGAAAATAATCCCTTAGCT+CGG - chr1_2:64259708-64259727 Msa0084720:intron 30.0%
!! TGAACCATGTTTTGAGTATA+AGG - chr1_2:64259925-64259944 Msa0084720:intron 30.0%
! TATAAGGTGCCAAAATGATA+TGG - chr1_2:64259941-64259960 Msa0084720:intron 30.0%
!! TTATTGACTTACAGATCTTC+GGG - chr1_2:64260020-64260039 Msa0084720:intron 30.0%
GGCCTAGAATGTTTATTTAT+TGG + chr1_2:64260312-64260331 None:intergenic 30.0%
! GCATTCTAATTCTCTTTTTC+TGG + chr1_2:64260333-64260352 None:intergenic 30.0%
TTCTATAGAACTGTTATGAG+TGG - chr1_2:64260715-64260734 Msa0084720:CDS 30.0%
!!! TCTACATTTTTTGTCGAGTA+CGG + chr1_2:64260749-64260768 None:intergenic 30.0%
TCTTCTCTTAATTCAGATGT+CGG - chr1_2:64260879-64260898 Msa0084720:intron 30.0%
! AGTGACAATTTGTTCACTAA+AGG - chr1_2:64260911-64260930 Msa0084720:intron 30.0%
TTTGGGTGAATTCTAGATTA+TGG - chr1_2:64260969-64260988 Msa0084720:CDS 30.0%
TTTGAAAAATACTCCCCTAT+TGG - chr1_2:64261067-64261086 Msa0084720:intron 30.0%
TTGAAAAATACTCCCCTATT+GGG - chr1_2:64261068-64261087 Msa0084720:intron 30.0%
TGAGATAAAGGTCTAAATAC+TGG - chr1_2:64261592-64261611 Msa0084720:intron 30.0%
! TTGTGTCCTTGTTATAGTAT+GGG - chr1_2:64261676-64261695 Msa0084720:intron 30.0%
GACAATGCATAATATATGCA+AGG + chr1_2:64261763-64261782 None:intergenic 30.0%
AGCTCAAAGAAAGAAAACAT+AGG + chr1_2:64261964-64261983 None:intergenic 30.0%
!! AGTTTGAACTTTTTCCCATT+AGG - chr1_2:64262059-64262078 Msa0084720:intron 30.0%
! ATTGACATGTTTCTATTCAC+AGG - chr1_2:64262089-64262108 Msa0084720:intron 30.0%
TGCAATATCAAGTAATCGAT+GGG + chr1_2:64262137-64262156 None:intergenic 30.0%
TTGCAATATCAAGTAATCGA+TGG + chr1_2:64262138-64262157 None:intergenic 30.0%
ATGCAGTTCATTGAAAGATT+TGG - chr1_2:64262161-64262180 Msa0084720:five_prime_UTR 30.0%
! TGAAAGATTTGGATTTGCTT+TGG - chr1_2:64262172-64262191 Msa0084720:five_prime_UTR 30.0%
TATTCATATCATCAGTGACA+TGG + chr1_2:64262303-64262322 None:intergenic 30.0%
GATGATATGAATATCCCTTA+AGG - chr1_2:64262310-64262329 Msa0084720:five_prime_UTR 30.0%
TAGACAATGAACATACTTGT+GGG + chr1_2:64262349-64262368 None:intergenic 30.0%
ATAGACAATGAACATACTTG+TGG + chr1_2:64262350-64262369 None:intergenic 30.0%
TCTGGGAAAGTTGAAATTGA+GGG + chr1_2:64256607-64256626 None:intergenic 35.0%
ATCTGGGAAAGTTGAAATTG+AGG + chr1_2:64256608-64256627 None:intergenic 35.0%
! AGAAGGAAGCACAATAATCT+GGG + chr1_2:64256624-64256643 None:intergenic 35.0%
ACCGCTGATGTAAAAAAAGA+TGG + chr1_2:64256671-64256690 None:intergenic 35.0%
!!! CTTTTTTTACATCAGCGGTT+TGG - chr1_2:64256672-64256691 Msa0084720:intron 35.0%
!! ATGGCTTCGATTTGTGATTT+TGG - chr1_2:64256842-64256861 Msa0084720:intron 35.0%
!! TGGCTTCGATTTGTGATTTT+GGG - chr1_2:64256843-64256862 Msa0084720:intron 35.0%
!!! GATTTGTGATTTTGGGTTTG+TGG - chr1_2:64256850-64256869 Msa0084720:intron 35.0%
! TTTGGGTTTGTGGTTTAATG+GGG - chr1_2:64256860-64256879 Msa0084720:intron 35.0%
! ATTGAATTTAGGGTTTGACG+GGG - chr1_2:64256904-64256923 Msa0084720:intron 35.0%
! TGTTTTCAGATAGGGATTCA+AGG - chr1_2:64256948-64256967 Msa0084720:intron 35.0%
CGCTAAAAATCTTCGTGTTA+AGG - chr1_2:64257012-64257031 Msa0084720:intron 35.0%
! TTGTTGCAGATGGTTCATTT+TGG - chr1_2:64257078-64257097 Msa0084720:intron 35.0%
! ACTGTGCTTTAAACTTTCAG+TGG + chr1_2:64257299-64257318 None:intergenic 35.0%
CGGTTTATTCTTTGTTCCTT+TGG - chr1_2:64257325-64257344 Msa0084720:intron 35.0%
TTGACAAATGACTGTAAGAG+TGG + chr1_2:64257504-64257523 None:intergenic 35.0%
! TTTTTGATGTACTCCTTCTG+AGG + chr1_2:64257541-64257560 None:intergenic 35.0%
CTGTGTTCAGTGACATTTAA+AGG + chr1_2:64257840-64257859 None:intergenic 35.0%
CATATTCTTACCTTGGATGT+TGG + chr1_2:64257935-64257954 None:intergenic 35.0%
ACATCCAAGGTAAGAATATG+TGG - chr1_2:64257935-64257954 Msa0084720:intron 35.0%
AAAGCCACATATTCTTACCT+TGG + chr1_2:64257942-64257961 None:intergenic 35.0%
CATCTTGAAATAAGAAAGGG+GGG + chr1_2:64258274-64258293 None:intergenic 35.0%
CATACCTGAAACAGATGATT+GGG + chr1_2:64258321-64258340 None:intergenic 35.0%
ATAACACCCTTACCTCTTAA+TGG - chr1_2:64258627-64258646 Msa0084720:intron 35.0%
TAACACCCTTACCTCTTAAT+GGG - chr1_2:64258628-64258647 Msa0084720:intron 35.0%
ATGATCAACTCTTCTTACTG+GGG + chr1_2:64258706-64258725 None:intergenic 35.0%
CTATGATCAACTCTTCTTAC+TGG + chr1_2:64258708-64258727 None:intergenic 35.0%
GTTCATAAAACCTGCATCTT+AGG - chr1_2:64258883-64258902 Msa0084720:intron 35.0%
ATAAAACCTGCATCTTAGGT+GGG - chr1_2:64258887-64258906 Msa0084720:intron 35.0%
CGGTTTATTTCAATCTCTGT+AGG + chr1_2:64259047-64259066 None:intergenic 35.0%
GCACGTGAGATTTCATTTAT+TGG - chr1_2:64259088-64259107 Msa0084720:intron 35.0%
!! TATGCTTTTTGTTTCCGTGA+AGG - chr1_2:64259510-64259529 Msa0084720:CDS 35.0%
TATATTATCCGCTGTCTTTG+CGG + chr1_2:64259584-64259603 None:intergenic 35.0%
TCTTGCTTAAAACACCTTCA+GGG + chr1_2:64259750-64259769 None:intergenic 35.0%
TTCTTGCTTAAAACACCTTC+AGG + chr1_2:64259751-64259770 None:intergenic 35.0%
!! AGTTTTCAGGATTTGAACTC+TGG + chr1_2:64259776-64259795 None:intergenic 35.0%
TATTGAAGTTGGGAATGGAA+TGG - chr1_2:64259862-64259881 Msa0084720:intron 35.0%
! AAAACCGGACCATATCATTT+TGG + chr1_2:64259953-64259972 None:intergenic 35.0%
! ACTTTTGTCTTTGGTCTCTT+AGG - chr1_2:64260084-64260103 Msa0084720:intron 35.0%
!! AGTTTGCTACAACTATCTTC+AGG + chr1_2:64260158-64260177 None:intergenic 35.0%
GCTAAACATGATCTAGAGAT+TGG - chr1_2:64260194-64260213 Msa0084720:intron 35.0%
TCCAAACAAAGGTAACATCT+TGG - chr1_2:64260254-64260273 Msa0084720:intron 35.0%
ACCAAGATGTTACCTTTGTT+TGG + chr1_2:64260258-64260277 None:intergenic 35.0%
AAAAGAGAATTAGAATGCCC+TGG - chr1_2:64260335-64260354 Msa0084720:intron 35.0%
! TAGCCTTAAAATGTGATCCA+GGG + chr1_2:64260355-64260374 None:intergenic 35.0%
! ATAGCCTTAAAATGTGATCC+AGG + chr1_2:64260356-64260375 None:intergenic 35.0%
CGACAATGTATTCTTAACGA+AGG + chr1_2:64260647-64260666 None:intergenic 35.0%
CAAAAAATGTAGAGTAGACC+AGG - chr1_2:64260756-64260775 Msa0084720:CDS 35.0%
CTTCTCTTAATTCAGATGTC+GGG - chr1_2:64260880-64260899 Msa0084720:intron 35.0%
ACCATACCAACAATCAGATA+TGG - chr1_2:64261105-64261124 Msa0084720:intron 35.0%
ACAATGGCATTGTTTCAGAT+AGG + chr1_2:64261197-64261216 None:intergenic 35.0%
AACAATGCCATTGTTTGCTT+TGG - chr1_2:64261203-64261222 Msa0084720:intron 35.0%
TCAAGTTCCAAAGCAAACAA+TGG + chr1_2:64261213-64261232 None:intergenic 35.0%
!! TTGTTTGCTTTGGAACTTGA+TGG - chr1_2:64261213-64261232 Msa0084720:intron 35.0%
GAACTTGATGGAAAGATGTA+AGG - chr1_2:64261225-64261244 Msa0084720:intron 35.0%
TAAACCCAAGATTGAACCAT+CGG + chr1_2:64261350-64261369 None:intergenic 35.0%
! GGTTTTACTAAGAGACTTAG+TGG - chr1_2:64261373-64261392 Msa0084720:intron 35.0%
CAATGGTACACAAAAGCAAA+GGG + chr1_2:64261411-64261430 None:intergenic 35.0%
ACAATGGTACACAAAAGCAA+AGG + chr1_2:64261412-64261431 None:intergenic 35.0%
TTGTGTGCTCATTGAGATAA+AGG - chr1_2:64261580-64261599 Msa0084720:intron 35.0%
GTCATGATTGTATATGTGTG+AGG - chr1_2:64261614-64261633 Msa0084720:intron 35.0%
TGTATATGTGTGAGGAACTT+TGG - chr1_2:64261622-64261641 Msa0084720:intron 35.0%
! CTTGTGTCCTTGTTATAGTA+TGG - chr1_2:64261675-64261694 Msa0084720:intron 35.0%
GACAAACCCATACTATAACA+AGG + chr1_2:64261685-64261704 None:intergenic 35.0%
!!! ATTACACATGTTTTTGGTGG+TGG - chr1_2:64261718-64261737 Msa0084720:intron 35.0%
CATAATATATGCAAGGTCTG+AGG + chr1_2:64261756-64261775 None:intergenic 35.0%
! TGAGCTTAGCTTAGTTGATA+TGG + chr1_2:64261785-64261804 None:intergenic 35.0%
TGTCAATCTTTGTGCCTAAT+GGG + chr1_2:64262076-64262095 None:intergenic 35.0%
ATGTCAATCTTTGTGCCTAA+TGG + chr1_2:64262077-64262096 None:intergenic 35.0%
! GTCTCTAAGTATAGCCTTAA+GGG + chr1_2:64262327-64262346 None:intergenic 35.0%
CGTATATCTTGCTTTCCTTG+AGG + chr1_2:64256548-64256567 None:intergenic 40.0%
ATTGAGGGTTCGTTCGTTAA+TGG + chr1_2:64256592-64256611 None:intergenic 40.0%
! GAGAAGGAAGCACAATAATC+TGG + chr1_2:64256625-64256644 None:intergenic 40.0%
!! AGATGGAGAATTGGTTTGGT+TGG + chr1_2:64256654-64256673 None:intergenic 40.0%
ACATTTAGCTGAAAAGGGGT+TGG - chr1_2:64256792-64256811 Msa0084720:intron 40.0%
GTTTGTGGTTTAATGGGGTT+TGG - chr1_2:64256865-64256884 Msa0084720:intron 40.0%
GTTAACTGTCCTATAAGGTC+TGG - chr1_2:64257383-64257402 Msa0084720:intron 40.0%
TCATCATTGAGATGCTGACA+TGG + chr1_2:64257564-64257583 None:intergenic 40.0%
! ATTGTTCTGCGATTTGTTCG+TGG - chr1_2:64257899-64257918 Msa0084720:intron 40.0%
TCAGTTTGATCCAACATCCA+AGG - chr1_2:64257922-64257941 Msa0084720:intron 40.0%
! TTTGAAATATGGGATACCGC+TGG - chr1_2:64258157-64258176 Msa0084720:intron 40.0%
AGAATGAATGATGCGCAATC+TGG + chr1_2:64258211-64258230 None:intergenic 40.0%
GATTCCCAATCATCTGTTTC+AGG - chr1_2:64258314-64258333 Msa0084720:intron 40.0%
GCATACCTGAAACAGATGAT+TGG + chr1_2:64258322-64258341 None:intergenic 40.0%
!! TTCTGGGCTTGTTATATCGT+AGG + chr1_2:64258392-64258411 None:intergenic 40.0%
GTGCTTTGCTGAAAGATTCT+GGG + chr1_2:64258408-64258427 None:intergenic 40.0%
TGTGCTTTGCTGAAAGATTC+TGG + chr1_2:64258409-64258428 None:intergenic 40.0%
TTTCAGCAAAGCACAGTACT+GGG - chr1_2:64258414-64258433 Msa0084720:intron 40.0%
CACGAGGATACATGTTTATC+TGG + chr1_2:64258599-64258618 None:intergenic 40.0%
! GGTGTTATCATTAAGTCACG+AGG + chr1_2:64258615-64258634 None:intergenic 40.0%
CATAAAACCTGCATCTTAGG+TGG - chr1_2:64258886-64258905 Msa0084720:intron 40.0%
TGCACAGAACAGGCAAATAT+TGG + chr1_2:64258995-64259014 None:intergenic 40.0%
! AACGTAAAAGTGCACAGAAC+AGG + chr1_2:64259005-64259024 None:intergenic 40.0%
AATGAAATCTCACGTGCGTA+AGG + chr1_2:64259085-64259104 None:intergenic 40.0%
CCAATGCCATCACTATATCA+GGG + chr1_2:64259375-64259394 None:intergenic 40.0%
ACCAATGCCATCACTATATC+AGG + chr1_2:64259376-64259395 None:intergenic 40.0%
!! GATATAGTGATGGCATTGGT+TGG - chr1_2:64259376-64259395 Msa0084720:intron 40.0%
!! CTTTTTGTTTCCGTGAAGGA+TGG - chr1_2:64259514-64259533 Msa0084720:intron 40.0%
! ATGGACTATGCAGAGAAGAA+CGG - chr1_2:64259538-64259557 Msa0084720:intron 40.0%
AAATAATCCCTTAGCTCGGT+TGG - chr1_2:64259712-64259731 Msa0084720:intron 40.0%
GGCACCTTATACTCAAAACA+TGG + chr1_2:64259932-64259951 None:intergenic 40.0%
CACATGATCAGCATCAAAAC+CGG + chr1_2:64259968-64259987 None:intergenic 40.0%
TGATCATGTGGTATGAAGCT+TGG - chr1_2:64259978-64259997 Msa0084720:intron 40.0%
! AGATCTTCGGGACTTTTCAA+AGG - chr1_2:64260032-64260051 Msa0084720:intron 40.0%
AGCAAACTCATACCTATTCG+AGG - chr1_2:64260170-64260189 Msa0084720:intron 40.0%
! TCATGTTTAGCTCCTCGAAT+AGG + chr1_2:64260185-64260204 None:intergenic 40.0%
CAAAGGTAACATCTTGGTCT+TGG - chr1_2:64260260-64260279 Msa0084720:intron 40.0%
!! ATCTTGGTCTTGGAATGCAT+AGG - chr1_2:64260270-64260289 Msa0084720:intron 40.0%
!! TCTTGGTCTTGGAATGCATA+GGG - chr1_2:64260271-64260290 Msa0084720:intron 40.0%
! ATGCCCTGGATCACATTTTA+AGG - chr1_2:64260349-64260368 Msa0084720:intron 40.0%
CAATGGTAGCAATTCTTGAG+GGG + chr1_2:64260437-64260456 None:intergenic 40.0%
CCAATGGTAGCAATTCTTGA+GGG + chr1_2:64260438-64260457 None:intergenic 40.0%
ACCAATGGTAGCAATTCTTG+AGG + chr1_2:64260439-64260458 None:intergenic 40.0%
CATAAGAAGCAGACAACCAA+TGG + chr1_2:64260454-64260473 None:intergenic 40.0%
TGTCTGCTTCTTATGCTTTG+AGG - chr1_2:64260459-64260478 Msa0084720:CDS 40.0%
! GATTTGAGAACTTGATGGCA+AGG + chr1_2:64260583-64260602 None:intergenic 40.0%
!!! ACATTTTTTGTCGAGTACGG+TGG + chr1_2:64260746-64260765 None:intergenic 40.0%
AAAATGTAGAGTAGACCAGG+TGG - chr1_2:64260759-64260778 Msa0084720:CDS 40.0%
ATTCTAGATTATGGACGACG+AGG - chr1_2:64260978-64260997 Msa0084720:CDS 40.0%
ATCTGATTGTTGGTATGGTG+CGG + chr1_2:64261104-64261123 None:intergenic 40.0%
GCCATATCTGATTGTTGGTA+TGG + chr1_2:64261109-64261128 None:intergenic 40.0%
! GTATCATACTCAAGTGGGTT+TGG + chr1_2:64261153-64261172 None:intergenic 40.0%
AACCCACTTGAGTATGATAC+TGG - chr1_2:64261153-64261172 Msa0084720:intron 40.0%
CACCAGTATCATACTCAAGT+GGG + chr1_2:64261158-64261177 None:intergenic 40.0%
GAGACTGTAGGCTAATATAC+AGG - chr1_2:64261316-64261335 Msa0084720:intron 40.0%
TATACAGGCAAATTGACCGA+TGG - chr1_2:64261331-64261350 Msa0084720:intron 40.0%
ATTGACCGATGGTTCAATCT+TGG - chr1_2:64261342-64261361 Msa0084720:intron 40.0%
TTGACCGATGGTTCAATCTT+GGG - chr1_2:64261343-64261362 Msa0084720:intron 40.0%
GGTTCAATCTTGGGTTTAAG+TGG - chr1_2:64261352-64261371 Msa0084720:intron 40.0%
!!! ACATGTTTTTGGTGGTGGTT+GGG - chr1_2:64261723-64261742 Msa0084720:intron 40.0%
!! ACAAGTTGATGCAAGATCAG+AGG + chr1_2:64262260-64262279 None:intergenic 40.0%
! GGTCTCTAAGTATAGCCTTA+AGG + chr1_2:64262328-64262347 None:intergenic 40.0%
TCATCAATGTGGCATGGAAG+TGG - chr1_2:64256512-64256531 Msa0084720:intron 45.0%
! GTTTGGTTGGTTGTGAGAGA+AGG + chr1_2:64256641-64256660 None:intergenic 45.0%
! TTAGGGTTTGACGGGGTTTT+TGG - chr1_2:64256911-64256930 Msa0084720:intron 45.0%
! ATGTACTCCTTCTGAGGATG+TGG + chr1_2:64257535-64257554 None:intergenic 45.0%
TGAACACAGCTTGTCCTCTT+AGG - chr1_2:64257851-64257870 Msa0084720:intron 45.0%
CTTGTCCTCTTAGGTGATTC+TGG - chr1_2:64257860-64257879 Msa0084720:intron 45.0%
CAACACCAGAATCACCTAAG+AGG + chr1_2:64257868-64257887 None:intergenic 45.0%
CTCTTAGGTGATTCTGGTGT+TGG - chr1_2:64257866-64257885 Msa0084720:intron 45.0%
AAGTTACCTCTCTTGACCAG+CGG + chr1_2:64258176-64258195 None:intergenic 45.0%
! CTGTTTCAGGTATGCTGCAT+TGG - chr1_2:64258327-64258346 Msa0084720:intron 45.0%
TTGGCACCACTGTATTATCG+TGG - chr1_2:64258346-64258365 Msa0084720:intron 45.0%
ACTGTATTATCGTGGTGCAG+CGG - chr1_2:64258354-64258373 Msa0084720:intron 45.0%
CTTTCAGCAAAGCACAGTAC+TGG - chr1_2:64258413-64258432 Msa0084720:intron 45.0%
! CAAAGCACAGTACTGGGTTA+AGG - chr1_2:64258420-64258439 Msa0084720:intron 45.0%
CTTCTTACTGGGGCTGATAT+TGG + chr1_2:64258696-64258715 None:intergenic 45.0%
TCGGAGAGGCCATTTATTCT+TGG + chr1_2:64258757-64258776 None:intergenic 45.0%
AAGAATAAATGGCCTCTCCG+AGG - chr1_2:64258756-64258775 Msa0084720:intron 45.0%
TCTATCAAACATGGGGTCCT+CGG + chr1_2:64258776-64258795 None:intergenic 45.0%
CTTATTCCCACCTAAGATGC+AGG + chr1_2:64258896-64258915 None:intergenic 45.0%
TAAGGAGTAACGAAGGAACC+CGG + chr1_2:64259067-64259086 None:intergenic 45.0%
TGGAAGCCCTGATATAGTGA+TGG - chr1_2:64259366-64259385 Msa0084720:intron 45.0%
CCCTGATATAGTGATGGCAT+TGG - chr1_2:64259372-64259391 Msa0084720:intron 45.0%
ATAGTCCATGCCATCCTTCA+CGG + chr1_2:64259527-64259546 None:intergenic 45.0%
TAGTTCACCAACCGAGCTAA+GGG + chr1_2:64259722-64259741 None:intergenic 45.0%
TTAGTTCACCAACCGAGCTA+AGG + chr1_2:64259723-64259742 None:intergenic 45.0%
GGTGCCAAAATGATATGGTC+CGG - chr1_2:64259946-64259965 Msa0084720:intron 45.0%
!! CGGTTTTGATGCTGATCATG+TGG - chr1_2:64259966-64259985 Msa0084720:intron 45.0%
! GTGGTATGAAGCTTGGTCTT+CGG - chr1_2:64259985-64260004 Msa0084720:intron 45.0%
CAGGCAGCAAGAACATCATA+GGG + chr1_2:64260139-64260158 None:intergenic 45.0%
TCAGGCAGCAAGAACATCAT+AGG + chr1_2:64260140-64260159 None:intergenic 45.0%
CCCTCAAGAATTGCTACCAT+TGG - chr1_2:64260435-64260454 Msa0084720:intron 45.0%
! AACCTTTCAAGTACACCACC+TGG + chr1_2:64260777-64260796 None:intergenic 45.0%
TTAATTCAGATGTCGGGTGC+AGG - chr1_2:64260886-64260905 Msa0084720:intron 45.0%
CCAAGTTCCTCCATACTTGT+GGG - chr1_2:64260934-64260953 Msa0084720:intron 45.0%
GATAGCTTCTGCTGATGGAA+CGG - chr1_2:64261000-64261019 Msa0084720:CDS 45.0%
GGACACTCATTACCCAATAG+GGG + chr1_2:64261083-64261102 None:intergenic 45.0%
CGGACACTCATTACCCAATA+GGG + chr1_2:64261084-64261103 None:intergenic 45.0%
TTGGGGCCATATCTGATTGT+TGG + chr1_2:64261114-64261133 None:intergenic 45.0%
AACAATCAGATATGGCCCCA+AGG - chr1_2:64261113-64261132 Msa0084720:intron 45.0%
! TCAAGTGGGTTTGGATGTCT+AGG + chr1_2:64261144-64261163 None:intergenic 45.0%
CCACCAGTATCATACTCAAG+TGG + chr1_2:64261159-64261178 None:intergenic 45.0%
CCACTTGAGTATGATACTGG+TGG - chr1_2:64261156-64261175 Msa0084720:intron 45.0%
TACTGGTGGAACCAACATGT+TGG - chr1_2:64261170-64261189 Msa0084720:intron 45.0%
ACTGGTGGAACCAACATGTT+GGG - chr1_2:64261171-64261190 Msa0084720:intron 45.0%
TTCAGATAGGCCCAACATGT+TGG + chr1_2:64261184-64261203 None:intergenic 45.0%
! CTTGTCTAAGACACGCTATG+TGG - chr1_2:64261290-64261309 Msa0084720:intron 45.0%
! TCTAAGACACGCTATGTGGT+AGG - chr1_2:64261294-64261313 Msa0084720:intron 45.0%
!!! CACATGTTTTTGGTGGTGGT+TGG - chr1_2:64261722-64261741 Msa0084720:intron 45.0%
!!! CATGTTTTTGGTGGTGGTTG+GGG - chr1_2:64261724-64261743 Msa0084720:intron 45.0%
TCAACTAAGCTAAGCTCACG+AGG - chr1_2:64261787-64261806 Msa0084720:intron 45.0%
TATCAAGTAATCGATGGGCG+AGG + chr1_2:64262132-64262151 None:intergenic 45.0%
GCATGATCAACAACCACCAA+AGG + chr1_2:64262416-64262435 None:intergenic 45.0%
!!! ATTCAATTTTAAATTAATTA+TGG - chr1_2:64259648-64259667 Msa0084720:intron 5.0%
!!! TTCAATTTTAAATTAATTAT+GGG - chr1_2:64259649-64259668 Msa0084720:intron 5.0%
AGTGGAAATCCTCGTCCTCA+AGG - chr1_2:64256530-64256549 Msa0084720:intron 50.0%
TCTTGCTTTCCTTGAGGACG+AGG + chr1_2:64256542-64256561 None:intergenic 50.0%
CAGCATCACCTAACGACCAT+GGG - chr1_2:64256710-64256729 Msa0084720:intron 50.0%
GATAGGGATTCAAGGCAGCT+AGG - chr1_2:64256956-64256975 Msa0084720:intron 50.0%
TCTTGTCCTCCACCATTCTC+GGG + chr1_2:64256992-64257011 None:intergenic 50.0%
GTCTTGTCCTCCACCATTCT+CGG + chr1_2:64256993-64257012 None:intergenic 50.0%
GCTGCACCACGATAATACAG+TGG + chr1_2:64258355-64258374 None:intergenic 50.0%
!! GGGGCTGATATTGGTCTTCT+AGG + chr1_2:64258687-64258706 None:intergenic 50.0%
ACGTGCGTAAGGAGTAACGA+AGG + chr1_2:64259074-64259093 None:intergenic 50.0%
GCTTACGCATGTGTGAGCAA+TGG + chr1_2:64259249-64259268 None:intergenic 50.0%
AAGCCGATCTTCACGAGAAG+CGG - chr1_2:64259404-64259423 Msa0084720:intron 50.0%
TGTTTCCGTGAAGGATGGCA+TGG - chr1_2:64259519-64259538 Msa0084720:intron 50.0%
AGAGACATCCGCAAAGACAG+CGG - chr1_2:64259573-64259592 Msa0084720:intron 50.0%
GGTGAACTAAGTGACCCTGA+AGG - chr1_2:64259733-64259752 Msa0084720:intron 50.0%
! TCGGGACTTTTCAAAGGCTG+TGG - chr1_2:64260038-64260057 Msa0084720:intron 50.0%
GTAGCAATTCTTGAGGGGCT+TGG + chr1_2:64260432-64260451 None:intergenic 50.0%
GACCAGGTGGTGTACTTGAA+AGG - chr1_2:64260772-64260791 Msa0084720:intron 50.0%
GCCAAGTTCCTCCATACTTG+TGG - chr1_2:64260933-64260952 Msa0084720:intron 50.0%
CCCACAAGTATGGAGGAACT+TGG + chr1_2:64260937-64260956 None:intergenic 50.0%
ACGAGGATAGCTTCTGCTGA+TGG - chr1_2:64260995-64261014 Msa0084720:CDS 50.0%
GCGGACACTCATTACCCAAT+AGG + chr1_2:64261085-64261104 None:intergenic 50.0%
AATCAGATATGGCCCCAAGG+TGG - chr1_2:64261116-64261135 Msa0084720:intron 50.0%
ATCAGATATGGCCCCAAGGT+GGG - chr1_2:64261117-64261136 Msa0084720:intron 50.0%
GCTATGTGGTAGGAGACTGT+AGG - chr1_2:64261304-64261323 Msa0084720:intron 50.0%
CAAAGGCGATGTGTCTGACA+TGG + chr1_2:64262399-64262418 None:intergenic 50.0%
CATGTCAGACACATCGCCTT+TGG - chr1_2:64262397-64262416 Msa0084720:five_prime_UTR 50.0%
GCAGCATCACCTAACGACCA+TGG - chr1_2:64256709-64256728 Msa0084720:intron 55.0%
! CACCTAACGACCATGGGTTG+CGG - chr1_2:64256716-64256735 Msa0084720:intron 55.0%
! CCTTCTGAGGATGTGGTTGC+AGG + chr1_2:64257528-64257547 None:intergenic 55.0%
CCTGCAACCACATCCTCAGA+AGG - chr1_2:64257525-64257544 Msa0084720:intron 55.0%
AGCCGATCTTCACGAGAAGC+GGG - chr1_2:64259405-64259424 Msa0084720:intron 55.0%
CTCCCGCTTCTCGTGAAGAT+CGG + chr1_2:64259410-64259429 None:intergenic 55.0%
TCCTCCATACTTGTGGGACG+TGG - chr1_2:64260940-64260959 Msa0084720:CDS 55.0%
CATACTTGTGGGACGTGGCA+GGG - chr1_2:64260945-64260964 Msa0084720:CDS 55.0%
ATACTTGTGGGACGTGGCAG+GGG - chr1_2:64260946-64260965 Msa0084720:CDS 55.0%
AGCTTCTGCTGATGGAACGG+CGG - chr1_2:64261003-64261022 Msa0084720:CDS 55.0%
! GATGTCTAGGACCCACCTTG+GGG + chr1_2:64261131-64261150 None:intergenic 55.0%
! GGATGTCTAGGACCCACCTT+GGG + chr1_2:64261132-64261151 None:intergenic 55.0%
! TGGATGTCTAGGACCCACCT+TGG + chr1_2:64261133-64261152 None:intergenic 55.0%
GTCAGACACATCGCCTTTGG+TGG - chr1_2:64262400-64262419 Msa0084720:five_prime_UTR 55.0%
AGCCGCAACCCATGGTCGTT+AGG + chr1_2:64256721-64256740 None:intergenic 60.0%
AAAGGAGGAGCCGCAACCCA+TGG + chr1_2:64256729-64256748 None:intergenic 60.0%
CCTCCACCATTCTCGGGACT+GGG + chr1_2:64256986-64257005 None:intergenic 60.0%
TCCTCCACCATTCTCGGGAC+TGG + chr1_2:64256987-64257006 None:intergenic 60.0%
GGGATACCGCTGGTCAAGAG+AGG - chr1_2:64258167-64258186 Msa0084720:intron 60.0%
CAAACATGGGGTCCTCGGAG+AGG + chr1_2:64258771-64258790 None:intergenic 60.0%
CGATCTTCACGAGAAGCGGG+AGG - chr1_2:64259408-64259427 Msa0084720:intron 60.0%
! GAAGCGGGAGGTTGCTGTTG+AGG - chr1_2:64259420-64259439 Msa0084720:intron 60.0%
GCCACGTCCCACAAGTATGG+AGG + chr1_2:64260944-64260963 None:intergenic 60.0%
CCTGCCACGTCCCACAAGTA+TGG + chr1_2:64260947-64260966 None:intergenic 60.0%
CCATACTTGTGGGACGTGGC+AGG - chr1_2:64260944-64260963 Msa0084720:CDS 60.0%
GGTTGCGGCTCCTCCTTTCC+AGG - chr1_2:64256731-64256750 Msa0084720:intron 65.0%
GGTCGACCCAGTCCCGAGAA+TGG - chr1_2:64256977-64256996 Msa0084720:intron 65.0%
CGACCCAGTCCCGAGAATGG+TGG - chr1_2:64256980-64256999 Msa0084720:intron 65.0%
CCCAGTCCCGAGAATGGTGG+AGG - chr1_2:64256983-64257002 Msa0084720:intron 65.0%
TGTGGGACGTGGCAGGGGTT+TGG - chr1_2:64260951-64260970 Msa0084720:CDS 65.0%
GTGGGACGTGGCAGGGGTTT+GGG - chr1_2:64260952-64260971 Msa0084720:CDS 65.0%
TGGAACGGCGGCGTGCATCT+TGG - chr1_2:64261015-64261034 Msa0084720:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 64256440 64262442 64256440 ID=Msa0084720;Name=Msa0084720
chr1_2 mRNA 64256440 64262442 64256440 ID=Msa0084720-mRNA-1;Parent=Msa0084720;Name=Msa0084720-mRNA-1;_AED=0.28;_eAED=0.32;_QI=288|0.85|0.87|1|0.85|1|8|0|204
chr1_2 exon 64256440 64256490 64256440 ID=Msa0084720-mRNA-1:exon:21681;Parent=Msa0084720-mRNA-1
chr1_2 exon 64259264 64259350 64259264 ID=Msa0084720-mRNA-1:exon:21680;Parent=Msa0084720-mRNA-1
chr1_2 exon 64259441 64259530 64259441 ID=Msa0084720-mRNA-1:exon:21679;Parent=Msa0084720-mRNA-1
chr1_2 exon 64260441 64260546 64260441 ID=Msa0084720-mRNA-1:exon:21678;Parent=Msa0084720-mRNA-1
chr1_2 exon 64260694 64260788 64260694 ID=Msa0084720-mRNA-1:exon:21677;Parent=Msa0084720-mRNA-1
chr1_2 exon 64260939 64261022 64260939 ID=Msa0084720-mRNA-1:exon:21676;Parent=Msa0084720-mRNA-1
chr1_2 exon 64261849 64261925 64261849 ID=Msa0084720-mRNA-1:exon:21675;Parent=Msa0084720-mRNA-1
chr1_2 exon 64262130 64262442 64262130 ID=Msa0084720-mRNA-1:exon:21674;Parent=Msa0084720-mRNA-1
chr1_2 five_prime_UTR 64262155 64262442 64262155 ID=Msa0084720-mRNA-1:five_prime_utr;Parent=Msa0084720-mRNA-1
chr1_2 CDS 64262130 64262154 64262130 ID=Msa0084720-mRNA-1:cds;Parent=Msa0084720-mRNA-1
chr1_2 CDS 64261849 64261925 64261849 ID=Msa0084720-mRNA-1:cds;Parent=Msa0084720-mRNA-1
chr1_2 CDS 64260939 64261022 64260939 ID=Msa0084720-mRNA-1:cds;Parent=Msa0084720-mRNA-1
chr1_2 CDS 64260694 64260788 64260694 ID=Msa0084720-mRNA-1:cds;Parent=Msa0084720-mRNA-1
chr1_2 CDS 64260441 64260546 64260441 ID=Msa0084720-mRNA-1:cds;Parent=Msa0084720-mRNA-1
chr1_2 CDS 64259441 64259530 64259441 ID=Msa0084720-mRNA-1:cds;Parent=Msa0084720-mRNA-1
chr1_2 CDS 64259264 64259350 64259264 ID=Msa0084720-mRNA-1:cds;Parent=Msa0084720-mRNA-1
chr1_2 CDS 64256440 64256490 64256440 ID=Msa0084720-mRNA-1:cds;Parent=Msa0084720-mRNA-1
Gene Sequence

>Msa0084720

ATGGGTTGCGGCTCCTCCTTTCCAGATAGGGATTCAAGGCAGCTAGGTCGACCCAGTCCCGAGAATGGTGGAGGACAAGACGCTAAAAATCTTCGTGTTAAGCTTGTCCTCTTAGGTGATTCTGGTGTTGGTAAGAGCTGCATTGTTCTGCGATTTGTTCGTGGTCAGTTTGATCCAACATCCAAGGTAACTGTTGGAGCTTCTTTCTTGTCACAAACAATCGCTCTGCAAGACTCTACAACAGTCAAGTTTGAAATATGGGATACCGCTGGTCAAGAGAGGTATGCTGCATTGGCACCACTGTATTATCGTGGTGCAGCGGTTGCAGTTATTGCCTACGATATAACAAGCCCAGAATCTTTCAGCAAAGCACAGTACTGGGTTAAGGAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCATTGGTTGGTAACAAAGCCGATCTTCACGAGAAGCGGGAGGTTGCTGTTGAGGATGGCATGGACTATGCAGAGAAGAACGGAATGTTTTTTATAGAGACATCCGCAAAGACAGCGGATAATATAAACGAACTGTTTGAGGATGCCATGTCAGACACATCGCCTTTGGTGGTTGTTGATCATGCTTTGTGA
Protein sequence

>Msa0084720

MGCGSSFPDRDSRQLGRPSPENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVAVEDGMDYAEKNGMFFIETSAKTADNINELFEDAMSDTSPLVVVDHAL*