Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127770 | XP_013470285.1 | 96.169 | 261 | 10 | 0 | 1 | 261 | 122 | 382 | 0.0 | 535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127770 | sp|Q940H3|TBL36_ARATH | 66.412 | 262 | 82 | 2 | 1 | 259 | 114 | 372 | 1.03e-129 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127770 | A0A072VSC4 | 96.169 | 261 | 10 | 0 | 1 | 261 | 122 | 382 | 0.0 | 535 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025160 | Msa0127770 | 0.827775 | 1.298207e-54 | -8.615850e-47 |
| Msa0044160 | Msa0127770 | 0.980104 | 1.868897e-149 | -8.615850e-47 |
| Msa0045810 | Msa0127770 | 0.811462 | 6.918183e-51 | -8.615850e-47 |
| Msa0062190 | Msa0127770 | 0.814831 | 1.260911e-51 | -8.615850e-47 |
| Msa0063940 | Msa0127770 | 0.800347 | 1.504060e-48 | -8.615850e-47 |
| Msa0072520 | Msa0127770 | 0.805563 | 1.256755e-49 | -8.615850e-47 |
| Msa0076350 | Msa0127770 | 0.804985 | 1.660392e-49 | -8.615850e-47 |
| Msa0077340 | Msa0127770 | 0.841779 | 3.863674e-58 | -8.615850e-47 |
| Msa0077560 | Msa0127770 | 0.828065 | 1.105907e-54 | -8.615850e-47 |
| Msa0106540 | Msa0127770 | 0.816623 | 5.025602e-52 | -8.615850e-47 |
| Msa0123070 | Msa0127770 | 0.812194 | 4.793354e-51 | -8.615850e-47 |
| Msa0124910 | Msa0127770 | 0.819154 | 1.348053e-52 | -8.615850e-47 |
| Msa0125360 | Msa0127770 | 0.847753 | 9.473374e-60 | -8.615850e-47 |
| Msa0127770 | Msa0139500 | 0.804075 | 2.571124e-49 | -8.615850e-47 |
| Msa0127770 | Msa0142430 | 0.808240 | 3.413713e-50 | -8.615850e-47 |
| Msa0127770 | Msa0183710 | 0.967119 | 7.688334e-127 | -8.615850e-47 |
| Msa0127770 | Msa0184500 | 0.800828 | 1.200215e-48 | -8.615850e-47 |
| Msa0127770 | Msa0203080 | 0.827227 | 1.757406e-54 | -8.615850e-47 |
| Msa0127770 | Msa0204950 | 0.801225 | 9.953320e-49 | -8.615850e-47 |
| Msa0127770 | Msa0235290 | 0.816294 | 5.956040e-52 | -8.615850e-47 |
| Msa0127770 | Msa0276860 | 0.822609 | 2.161548e-53 | -8.615850e-47 |
| Msa0127770 | Msa0281470 | 0.822170 | 2.733341e-53 | -8.615850e-47 |
| Msa0127770 | Msa0284800 | 0.830402 | 2.996874e-55 | -8.615850e-47 |
| Msa0127770 | Msa0307270 | 0.809479 | 1.853777e-50 | -8.615850e-47 |
| Msa0127770 | Msa0313900 | 0.832096 | 1.148983e-55 | -8.615850e-47 |
| Msa0127770 | Msa0330520 | 0.850307 | 1.848529e-60 | -8.615850e-47 |
| Msa0127770 | Msa0354840 | 0.846553 | 2.021040e-59 | -8.615850e-47 |
| Msa0127770 | Msa0365210 | 0.813305 | 2.737358e-51 | -8.615850e-47 |
| Msa0127770 | Msa0375640 | 0.836740 | 7.840791e-57 | -8.615850e-47 |
| Msa0127770 | Msa0424160 | 0.833572 | 4.936610e-56 | -8.615850e-47 |
| Msa0127770 | Msa0432010 | 0.813647 | 2.302263e-51 | -8.615850e-47 |
| Msa0127770 | Msa0437480 | 0.840244 | 9.771793e-58 | -8.615850e-47 |
| Msa0127770 | Msa0437520 | 0.979831 | 7.700234e-149 | -8.615850e-47 |
| Msa0127770 | Msa0440350 | 0.852762 | 3.730688e-61 | -8.615850e-47 |
| Msa0127770 | Msa0481890 | 0.803679 | 3.106370e-49 | -8.615850e-47 |
| Msa0127770 | Msa0515800 | 0.820819 | 5.606332e-53 | -8.615850e-47 |
| Msa0127770 | Msa0529030 | 0.816533 | 5.264959e-52 | -8.615850e-47 |
| Msa0127770 | Msa0567330 | 0.809806 | 1.577523e-50 | -8.615850e-47 |
| Msa0127770 | Msa0574900 | 0.812226 | 4.717480e-51 | -8.615850e-47 |
| Msa0127770 | Msa0579160 | 0.800591 | 1.341398e-48 | -8.615850e-47 |
| Msa0127770 | Msa0579220 | 0.800693 | 1.278708e-48 | -8.615850e-47 |
| Msa0127770 | Msa0610690 | 0.811622 | 6.384184e-51 | -8.615850e-47 |
| Msa0127770 | Msa0636540 | 0.809179 | 2.150394e-50 | -8.615850e-47 |
| Msa0127770 | Msa0648970 | 0.801059 | 1.076313e-48 | -8.615850e-47 |
| Msa0127770 | Msa0657710 | 0.825513 | 4.498552e-54 | -8.615850e-47 |
| Msa0127770 | Msa0657720 | 0.813112 | 3.017732e-51 | -8.615850e-47 |
| Msa0127770 | Msa0674480 | 0.806058 | 9.892687e-50 | -8.615850e-47 |
| Msa0127770 | Msa0682770 | 0.800854 | 1.185520e-48 | -8.615850e-47 |
| Msa0127770 | Msa0687580 | 0.810033 | 1.409083e-50 | -8.615850e-47 |
| Msa0127770 | Msa0692790 | 0.802443 | 5.597696e-49 | -8.615850e-47 |
| Msa0127770 | Msa0702790 | 0.814029 | 1.897115e-51 | -8.615850e-47 |
| Msa0127770 | Msa0702800 | 0.825382 | 4.832770e-54 | -8.615850e-47 |
| Msa0127770 | Msa0703950 | 0.834741 | 2.515254e-56 | -8.615850e-47 |
| Msa0127770 | Msa0709440 | 0.804528 | 2.069000e-49 | -8.615850e-47 |
| Msa0127770 | Msa0722890 | 0.828584 | 8.290719e-55 | -8.615850e-47 |
| Msa0127770 | Msa0723090 | 0.844680 | 6.505214e-59 | -8.615850e-47 |
| Msa0127770 | Msa0745140 | 0.811006 | 8.686727e-51 | -8.615850e-47 |
| Msa0127770 | Msa0772220 | 0.834984 | 2.184204e-56 | -8.615850e-47 |
| Msa0127770 | Msa0776640 | 0.811756 | 5.970327e-51 | -8.615850e-47 |
| Msa0127770 | Msa0780910 | 0.810089 | 1.370964e-50 | -8.615850e-47 |
| Msa0127770 | Msa0795750 | 0.821219 | 4.536820e-53 | -8.615850e-47 |
| Msa0127770 | Msa0821160 | 0.817603 | 3.027192e-52 | -8.615850e-47 |
| Msa0127770 | Msa0825920 | 0.805734 | 1.157188e-49 | -8.615850e-47 |
| Msa0127770 | Msa0828950 | 0.809490 | 1.844413e-50 | -8.615850e-47 |
| Msa0127770 | Msa0828960 | 0.827565 | 1.458623e-54 | -8.615850e-47 |
| Msa0127770 | Msa0838620 | -0.800000 | 1.769090e-48 | -8.615850e-47 |
| Msa0127770 | Msa0851850 | 0.806680 | 7.313501e-50 | -8.615850e-47 |
| Msa0127770 | Msa0865420 | 0.837880 | 4.002281e-57 | -8.615850e-47 |
| Msa0127770 | Msa0878280 | 0.801731 | 7.841963e-49 | -8.615850e-47 |
| Msa0127770 | Msa0880910 | 0.806805 | 6.880759e-50 | -8.615850e-47 |
| Msa0127770 | Msa0967780 | 0.818430 | 1.968462e-52 | -8.615850e-47 |
| Msa0127770 | Msa0980290 | 0.801911 | 7.199985e-49 | -8.615850e-47 |
| Msa0127770 | Msa1022420 | 0.823936 | 1.058863e-53 | -8.615850e-47 |
| Msa0127770 | Msa1031410 | 0.809611 | 1.736632e-50 | -8.615850e-47 |
| Msa0127770 | Msa1044250 | 0.863540 | 2.313789e-64 | -8.615850e-47 |
| Msa0127770 | Msa1072940 | 0.809996 | 1.435443e-50 | -8.615850e-47 |
| Msa0127770 | Msa1074900 | 0.803775 | 2.968017e-49 | -8.615850e-47 |
| Msa0127770 | Msa1081970 | 0.826369 | 2.817058e-54 | -8.615850e-47 |
| Msa0127770 | Msa1082410 | 0.829082 | 6.280871e-55 | -8.615850e-47 |
| Msa0127770 | Msa1106590 | 0.840484 | 8.457536e-58 | -8.615850e-47 |
| Msa0127770 | Msa1125820 | 0.801201 | 1.006708e-48 | -8.615850e-47 |
| Msa0127770 | Msa1125990 | 0.804310 | 2.296635e-49 | -8.615850e-47 |
| Msa0127770 | Msa1147700 | 0.807057 | 6.087105e-50 | -8.615850e-47 |
| Msa0127770 | Msa1149910 | 0.808849 | 2.530398e-50 | -8.615850e-47 |
| Msa0127770 | Msa1169660 | 0.812549 | 4.008943e-51 | -8.615850e-47 |
| Msa0127770 | Msa1171290 | 0.805939 | 1.047875e-49 | -8.615850e-47 |
| Msa0127770 | Msa1194240 | 0.800434 | 1.443864e-48 | -8.615850e-47 |
| Msa0127770 | Msa1254100 | 0.826846 | 2.167624e-54 | -8.615850e-47 |
| Msa0127770 | Msa1262590 | 0.836871 | 7.259231e-57 | -8.615850e-47 |
| Msa0127770 | Msa1283930 | 0.806006 | 1.014202e-49 | -8.615850e-47 |
| Msa0127770 | Msa1322960 | 0.800382 | 1.479571e-48 | -8.615850e-47 |
| Msa0127770 | Msa1327800 | 0.803546 | 3.310780e-49 | -8.615850e-47 |
| Msa0127770 | Msa1368390 | 0.809600 | 1.746640e-50 | -8.615850e-47 |
| Msa0127770 | Msa1368750 | 0.814205 | 1.734945e-51 | -8.615850e-47 |
| Msa0127770 | Msa1374790 | 0.806708 | 7.214170e-50 | -8.615850e-47 |
| Msa0127770 | Msa1391500 | 0.808186 | 3.505650e-50 | -8.615850e-47 |
| Msa0127770 | Msa1398810 | 0.808016 | 3.809724e-50 | -8.615850e-47 |
| Msa0127770 | Msa1405460 | 0.819154 | 1.348203e-52 | -8.615850e-47 |
| Msa0127770 | Msa1405830 | 0.813196 | 2.893258e-51 | -8.615850e-47 |
| Msa0127770 | Msa1407810 | 0.801536 | 8.598714e-49 | -8.615850e-47 |
| Msa0127770 | Msa1407840 | 0.801767 | 7.709086e-49 | -8.615850e-47 |
| Msa0127770 | Msa1422860 | 0.802631 | 5.118421e-49 | -8.615850e-47 |
| Msa0127770 | Msa1433360 | 0.823913 | 1.071888e-53 | -8.615850e-47 |
| Msa0127770 | Msa1437780 | 0.800827 | 1.200802e-48 | -8.615850e-47 |
| Msa0127770 | Msa1437810 | 0.800916 | 1.151489e-48 | -8.615850e-47 |
| Msa0127770 | Msa1447100 | 0.973079 | 7.980454e-136 | -8.615850e-47 |
| Msa0127770 | Msa1449900 | 0.966141 | 1.586277e-125 | -8.615850e-47 |
| Msa0127770 | Msa1451820 | 0.811762 | 5.953881e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127770 | MtrunA17_Chr1g0210771 | 96.169 | 261 | 10 | 0 | 1 | 261 | 122 | 382 | 0.0 | 535 |
| Msa0127770 | MtrunA17_Chr1g0171171 | 75.954 | 262 | 60 | 2 | 1 | 261 | 116 | 375 | 6.89e-153 | 431 |
| Msa0127770 | MtrunA17_Chr3g0105301 | 40.876 | 274 | 145 | 4 | 1 | 261 | 107 | 376 | 2.38e-74 | 231 |
| Msa0127770 | MtrunA17_Chr5g0430371 | 38.267 | 277 | 148 | 4 | 1 | 257 | 122 | 395 | 2.74e-71 | 224 |
| Msa0127770 | MtrunA17_Chr4g0006991 | 41.429 | 280 | 142 | 6 | 1 | 261 | 151 | 427 | 3.95e-70 | 221 |
| Msa0127770 | MtrunA17_Chr2g0283581 | 41.199 | 267 | 136 | 6 | 2 | 261 | 106 | 358 | 9.26e-69 | 216 |
| Msa0127770 | MtrunA17_Chr3g0097891 | 41.636 | 269 | 134 | 6 | 2 | 261 | 96 | 350 | 6.36e-67 | 211 |
| Msa0127770 | MtrunA17_Chr2g0314791 | 42.748 | 262 | 132 | 6 | 2 | 261 | 100 | 345 | 2.02e-65 | 207 |
| Msa0127770 | MtrunA17_Chr7g0258851 | 39.286 | 280 | 147 | 7 | 1 | 261 | 312 | 587 | 5.89e-63 | 207 |
| Msa0127770 | MtrunA17_Chr2g0314801 | 38.636 | 264 | 143 | 5 | 1 | 257 | 98 | 349 | 6.95e-63 | 201 |
| Msa0127770 | MtrunA17_Chr1g0213281 | 40.143 | 279 | 147 | 6 | 1 | 261 | 239 | 515 | 2.90e-62 | 204 |
| Msa0127770 | MtrunA17_Chr2g0325481 | 36.466 | 266 | 149 | 5 | 2 | 261 | 115 | 366 | 5.22e-62 | 199 |
| Msa0127770 | MtrunA17_Chr1g0175671 | 38.489 | 278 | 152 | 6 | 1 | 261 | 234 | 509 | 1.87e-61 | 202 |
| Msa0127770 | MtrunA17_Chr5g0413851 | 38.806 | 268 | 145 | 5 | 1 | 261 | 104 | 359 | 2.49e-61 | 197 |
| Msa0127770 | MtrunA17_Chr7g0242701 | 39.286 | 280 | 148 | 6 | 1 | 261 | 151 | 427 | 2.51e-61 | 199 |
| Msa0127770 | MtrunA17_Chr7g0269991 | 35.793 | 271 | 152 | 4 | 1 | 257 | 201 | 463 | 1.24e-60 | 198 |
| Msa0127770 | MtrunA17_Chr4g0045951 | 38.060 | 268 | 143 | 7 | 2 | 261 | 110 | 362 | 3.70e-60 | 194 |
| Msa0127770 | MtrunA17_Chr4g0041011 | 36.059 | 269 | 146 | 7 | 2 | 261 | 112 | 363 | 1.15e-59 | 193 |
| Msa0127770 | MtrunA17_Chr3g0113671 | 38.869 | 283 | 139 | 8 | 1 | 257 | 171 | 445 | 2.00e-59 | 194 |
| Msa0127770 | MtrunA17_Chr5g0413271 | 36.059 | 269 | 163 | 5 | 1 | 261 | 209 | 476 | 2.22e-59 | 195 |
| Msa0127770 | MtrunA17_Chr4g0005491 | 36.299 | 281 | 159 | 7 | 1 | 261 | 127 | 407 | 3.53e-58 | 190 |
| Msa0127770 | MtrunA17_Chr4g0045941 | 34.962 | 266 | 154 | 5 | 2 | 261 | 98 | 350 | 4.36e-58 | 188 |
| Msa0127770 | MtrunA17_Chr5g0437291 | 38.811 | 286 | 138 | 9 | 1 | 257 | 230 | 507 | 9.72e-58 | 192 |
| Msa0127770 | MtrunA17_Chr4g0068111 | 35.484 | 279 | 158 | 6 | 1 | 261 | 179 | 453 | 7.05e-57 | 188 |
| Msa0127770 | MtrunA17_Chr8g0360521 | 36.655 | 281 | 151 | 8 | 1 | 261 | 136 | 409 | 2.59e-56 | 186 |
| Msa0127770 | MtrunA17_Chr3g0085081 | 34.962 | 266 | 152 | 5 | 1 | 259 | 95 | 346 | 2.62e-55 | 181 |
| Msa0127770 | MtrunA17_Chr4g0071391 | 34.892 | 278 | 160 | 6 | 1 | 261 | 173 | 446 | 1.29e-54 | 182 |
| Msa0127770 | MtrunA17_Chr3g0114101 | 36.201 | 279 | 158 | 6 | 1 | 261 | 154 | 430 | 1.76e-54 | 181 |
| Msa0127770 | MtrunA17_Chr3g0091031 | 34.962 | 266 | 152 | 5 | 1 | 259 | 95 | 346 | 5.51e-54 | 177 |
| Msa0127770 | MtrunA17_Chr8g0368461 | 33.099 | 284 | 162 | 7 | 1 | 257 | 242 | 524 | 2.65e-52 | 178 |
| Msa0127770 | MtrunA17_Chr3g0085071 | 32.707 | 266 | 158 | 5 | 1 | 259 | 110 | 361 | 1.11e-51 | 172 |
| Msa0127770 | MtrunA17_Chr4g0005481 | 34.058 | 276 | 165 | 5 | 1 | 261 | 173 | 446 | 1.33e-51 | 174 |
| Msa0127770 | MtrunA17_Chr5g0437601 | 35.714 | 280 | 158 | 7 | 1 | 261 | 148 | 424 | 9.17e-51 | 171 |
| Msa0127770 | MtrunA17_Chr7g0243301 | 31.673 | 281 | 172 | 7 | 1 | 261 | 129 | 409 | 1.81e-48 | 165 |
| Msa0127770 | MtrunA17_Chr2g0287901 | 32.746 | 284 | 157 | 7 | 1 | 259 | 161 | 435 | 1.40e-42 | 150 |
| Msa0127770 | MtrunA17_Chr8g0384151 | 32.000 | 275 | 161 | 5 | 1 | 261 | 154 | 416 | 1.98e-41 | 147 |
| Msa0127770 | MtrunA17_Chr3g0126021 | 34.420 | 276 | 153 | 5 | 1 | 261 | 197 | 459 | 4.12e-41 | 147 |
| Msa0127770 | MtrunA17_Chr7g0259711 | 31.560 | 282 | 168 | 7 | 1 | 261 | 155 | 432 | 1.09e-40 | 145 |
| Msa0127770 | MtrunA17_Chr1g0209921 | 37.654 | 162 | 94 | 5 | 2 | 161 | 111 | 267 | 1.35e-29 | 112 |
| Msa0127770 | MtrunA17_Chr1g0178081 | 27.536 | 276 | 128 | 9 | 2 | 261 | 122 | 341 | 1.81e-24 | 100 |
| Msa0127770 | MtrunA17_Chr8g0384421 | 27.083 | 288 | 166 | 13 | 1 | 259 | 198 | 470 | 1.19e-20 | 90.9 |
| Msa0127770 | MtrunA17_Chr7g0226991 | 26.190 | 294 | 164 | 12 | 1 | 257 | 121 | 398 | 2.00e-17 | 81.3 |
| Msa0127770 | MtrunA17_Chr4g0070341 | 27.431 | 288 | 165 | 13 | 1 | 259 | 197 | 469 | 2.18e-17 | 81.3 |
| Msa0127770 | MtrunA17_Chr6g0451321 | 25.424 | 295 | 168 | 14 | 1 | 261 | 181 | 457 | 2.72e-17 | 80.9 |
| Msa0127770 | MtrunA17_Chr3g0085101 | 33.645 | 107 | 64 | 2 | 123 | 222 | 1 | 107 | 3.66e-17 | 75.5 |
| Msa0127770 | MtrunA17_Chr6g0476041 | 24.399 | 291 | 175 | 11 | 1 | 257 | 231 | 510 | 1.38e-16 | 79.0 |
| Msa0127770 | MtrunA17_Chr6g0456691 | 25.704 | 284 | 174 | 10 | 1 | 257 | 142 | 415 | 4.34e-16 | 77.4 |
| Msa0127770 | MtrunA17_Chr4g0049421 | 25.175 | 286 | 177 | 9 | 1 | 258 | 113 | 389 | 6.66e-16 | 76.6 |
| Msa0127770 | MtrunA17_Chr1g0188191 | 25.168 | 298 | 164 | 14 | 1 | 257 | 298 | 577 | 8.74e-16 | 76.6 |
| Msa0127770 | MtrunA17_Chr2g0287931 | 34.783 | 115 | 63 | 3 | 1 | 103 | 6 | 120 | 1.91e-15 | 70.9 |
| Msa0127770 | MtrunA17_Chr8g0391481 | 25.939 | 293 | 166 | 14 | 1 | 257 | 91 | 368 | 2.76e-15 | 74.7 |
| Msa0127770 | MtrunA17_Chr8g0387921 | 25.260 | 289 | 173 | 13 | 1 | 257 | 138 | 415 | 3.25e-15 | 74.7 |
| Msa0127770 | MtrunA17_Chr3g0140371 | 26.132 | 287 | 161 | 13 | 6 | 257 | 86 | 356 | 1.48e-14 | 72.4 |
| Msa0127770 | MtrunA17_Chr1g0209931 | 48.101 | 79 | 28 | 3 | 184 | 261 | 26 | 92 | 3.84e-14 | 66.6 |
| Msa0127770 | MtrunA17_Chr6g0455901 | 25.704 | 284 | 162 | 10 | 8 | 257 | 144 | 412 | 7.34e-13 | 67.8 |
| Msa0127770 | MtrunA17_Chr6g0456681 | 24.567 | 289 | 174 | 9 | 1 | 257 | 128 | 404 | 1.30e-12 | 67.0 |
| Msa0127770 | MtrunA17_Chr5g0414041 | 27.211 | 294 | 162 | 13 | 1 | 257 | 151 | 429 | 9.17e-12 | 64.7 |
| Msa0127770 | MtrunA17_Chr5g0429191 | 52.174 | 46 | 20 | 1 | 209 | 254 | 2 | 45 | 1.19e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127770 | AT3G54260.1 | 66.412 | 262 | 82 | 2 | 1 | 259 | 114 | 372 | 1.05e-130 | 375 |
| Msa0127770 | AT5G58600.1 | 39.927 | 273 | 149 | 4 | 1 | 261 | 131 | 400 | 9.76e-72 | 225 |
| Msa0127770 | AT1G29050.1 | 40.226 | 266 | 140 | 4 | 2 | 261 | 126 | 378 | 2.82e-67 | 213 |
| Msa0127770 | AT2G34070.1 | 39.552 | 268 | 140 | 6 | 2 | 261 | 130 | 383 | 9.00e-66 | 209 |
| Msa0127770 | AT2G34070.2 | 38.783 | 263 | 139 | 6 | 7 | 261 | 1 | 249 | 4.23e-64 | 201 |
| Msa0127770 | AT5G06700.1 | 38.267 | 277 | 154 | 5 | 1 | 261 | 319 | 594 | 1.53e-63 | 209 |
| Msa0127770 | AT2G31110.2 | 39.630 | 270 | 138 | 6 | 1 | 261 | 109 | 362 | 3.99e-63 | 202 |
| Msa0127770 | AT5G01360.2 | 37.857 | 280 | 153 | 6 | 1 | 261 | 101 | 378 | 4.66e-63 | 202 |
| Msa0127770 | AT5G01360.1 | 37.857 | 280 | 153 | 6 | 1 | 261 | 157 | 434 | 1.85e-62 | 202 |
| Msa0127770 | AT1G78710.1 | 36.704 | 267 | 152 | 4 | 1 | 261 | 101 | 356 | 1.03e-61 | 198 |
| Msa0127770 | AT2G30010.1 | 38.434 | 281 | 147 | 6 | 1 | 261 | 122 | 396 | 1.30e-61 | 199 |
| Msa0127770 | AT3G12060.1 | 37.722 | 281 | 150 | 7 | 1 | 261 | 260 | 535 | 2.78e-61 | 202 |
| Msa0127770 | AT2G30010.2 | 38.434 | 281 | 147 | 6 | 1 | 261 | 165 | 439 | 3.75e-61 | 199 |
| Msa0127770 | AT2G30900.1 | 38.722 | 266 | 142 | 6 | 1 | 257 | 108 | 361 | 5.38e-61 | 197 |
| Msa0127770 | AT3G62390.1 | 37.269 | 271 | 151 | 5 | 1 | 257 | 202 | 467 | 8.49e-61 | 199 |
| Msa0127770 | AT2G42570.1 | 37.407 | 270 | 144 | 6 | 1 | 261 | 111 | 364 | 2.56e-59 | 192 |
| Msa0127770 | AT2G40150.1 | 36.364 | 286 | 148 | 7 | 1 | 257 | 136 | 416 | 7.64e-57 | 187 |
| Msa0127770 | AT5G49340.1 | 36.786 | 280 | 156 | 7 | 1 | 261 | 164 | 441 | 1.08e-56 | 188 |
| Msa0127770 | AT3G55990.1 | 37.184 | 277 | 152 | 6 | 1 | 257 | 205 | 479 | 1.22e-56 | 189 |
| Msa0127770 | AT1G60790.1 | 34.672 | 274 | 161 | 7 | 1 | 257 | 256 | 528 | 3.39e-56 | 189 |
| Msa0127770 | AT1G73140.1 | 36.201 | 279 | 155 | 7 | 1 | 261 | 132 | 405 | 6.53e-56 | 185 |
| Msa0127770 | AT5G01620.2 | 35.740 | 277 | 159 | 6 | 1 | 261 | 176 | 449 | 2.83e-55 | 184 |
| Msa0127770 | AT5G01620.1 | 35.740 | 277 | 159 | 6 | 1 | 261 | 176 | 449 | 2.83e-55 | 184 |
| Msa0127770 | AT5G20590.1 | 35.740 | 277 | 159 | 6 | 1 | 261 | 206 | 479 | 2.98e-55 | 185 |
| Msa0127770 | AT5G01620.3 | 35.740 | 277 | 159 | 6 | 1 | 261 | 184 | 457 | 4.03e-55 | 184 |
| Msa0127770 | AT3G11030.1 | 35.252 | 278 | 163 | 5 | 1 | 261 | 171 | 448 | 3.49e-53 | 179 |
| Msa0127770 | AT2G40160.2 | 33.449 | 287 | 160 | 8 | 1 | 261 | 142 | 423 | 9.36e-53 | 177 |
| Msa0127770 | AT2G40160.1 | 33.101 | 287 | 161 | 8 | 1 | 261 | 142 | 423 | 1.22e-52 | 177 |
| Msa0127770 | AT3G14850.2 | 35.094 | 265 | 150 | 6 | 2 | 257 | 99 | 350 | 2.63e-52 | 174 |
| Msa0127770 | AT2G38320.2 | 33.096 | 281 | 168 | 7 | 1 | 261 | 41 | 321 | 1.38e-51 | 171 |
| Msa0127770 | AT3G14850.1 | 35.000 | 260 | 147 | 6 | 7 | 257 | 1 | 247 | 2.86e-51 | 168 |
| Msa0127770 | AT2G40320.1 | 35.379 | 277 | 163 | 5 | 1 | 261 | 146 | 422 | 5.96e-51 | 172 |
| Msa0127770 | AT2G38320.1 | 33.096 | 281 | 168 | 7 | 1 | 261 | 124 | 404 | 9.87e-51 | 171 |
| Msa0127770 | AT2G31110.1 | 39.908 | 218 | 106 | 6 | 49 | 257 | 9 | 210 | 7.98e-50 | 163 |
| Msa0127770 | AT1G48880.1 | 33.922 | 283 | 143 | 7 | 1 | 261 | 179 | 439 | 2.10e-45 | 158 |
| Msa0127770 | AT3G11570.1 | 33.452 | 281 | 158 | 8 | 2 | 261 | 147 | 419 | 3.12e-44 | 154 |
| Msa0127770 | AT3G06080.2 | 33.333 | 285 | 156 | 8 | 1 | 259 | 167 | 443 | 4.76e-44 | 155 |
| Msa0127770 | AT5G58600.2 | 41.358 | 162 | 94 | 1 | 1 | 162 | 131 | 291 | 5.16e-44 | 150 |
| Msa0127770 | AT5G06230.2 | 33.929 | 280 | 158 | 7 | 2 | 261 | 92 | 364 | 5.02e-43 | 150 |
| Msa0127770 | AT5G19160.1 | 32.404 | 287 | 159 | 7 | 1 | 259 | 163 | 442 | 6.38e-43 | 152 |
| Msa0127770 | AT5G06230.1 | 33.929 | 280 | 158 | 7 | 2 | 261 | 133 | 405 | 1.06e-42 | 150 |
| Msa0127770 | AT3G62390.2 | 40.116 | 172 | 93 | 2 | 1 | 162 | 202 | 373 | 2.60e-40 | 144 |
| Msa0127770 | AT2G31110.3 | 41.290 | 155 | 89 | 2 | 1 | 155 | 109 | 261 | 2.07e-37 | 133 |
| Msa0127770 | AT2G30900.2 | 39.877 | 163 | 95 | 3 | 1 | 162 | 108 | 268 | 7.80e-36 | 129 |
| Msa0127770 | AT1G78710.2 | 30.153 | 262 | 123 | 6 | 1 | 261 | 94 | 296 | 4.26e-34 | 125 |
| Msa0127770 | AT2G40160.3 | 35.088 | 171 | 102 | 4 | 1 | 162 | 142 | 312 | 6.34e-31 | 117 |
| Msa0127770 | AT5G20590.2 | 34.104 | 173 | 103 | 3 | 1 | 162 | 206 | 378 | 2.80e-28 | 111 |
| Msa0127770 | AT3G06080.1 | 33.333 | 174 | 104 | 3 | 1 | 162 | 167 | 340 | 7.12e-28 | 109 |
| Msa0127770 | AT5G19160.2 | 33.908 | 174 | 103 | 3 | 1 | 162 | 163 | 336 | 8.52e-27 | 107 |
| Msa0127770 | AT5G06230.3 | 34.104 | 173 | 102 | 3 | 2 | 162 | 133 | 305 | 8.77e-26 | 103 |
| Msa0127770 | AT1G70230.1 | 27.241 | 290 | 153 | 13 | 1 | 257 | 143 | 407 | 3.62e-19 | 86.7 |
| Msa0127770 | AT5G64020.1 | 25.172 | 290 | 181 | 13 | 1 | 259 | 122 | 406 | 1.47e-18 | 84.7 |
| Msa0127770 | AT5G20680.4 | 26.689 | 296 | 161 | 13 | 1 | 261 | 277 | 551 | 2.79e-18 | 84.3 |
| Msa0127770 | AT5G20680.1 | 26.689 | 296 | 161 | 13 | 1 | 261 | 277 | 551 | 2.79e-18 | 84.3 |
| Msa0127770 | AT5G20680.3 | 26.689 | 296 | 161 | 13 | 1 | 261 | 277 | 551 | 2.79e-18 | 84.3 |
| Msa0127770 | AT5G20680.5 | 26.689 | 296 | 161 | 13 | 1 | 261 | 277 | 551 | 2.79e-18 | 84.3 |
| Msa0127770 | AT5G20680.6 | 26.689 | 296 | 161 | 13 | 1 | 261 | 183 | 457 | 2.79e-18 | 84.3 |
| Msa0127770 | AT5G20680.2 | 26.689 | 296 | 161 | 13 | 1 | 261 | 259 | 533 | 3.06e-18 | 84.3 |
| Msa0127770 | AT1G01430.1 | 24.476 | 286 | 182 | 10 | 1 | 257 | 163 | 443 | 9.54e-18 | 82.8 |
| Msa0127770 | AT4G01080.1 | 25.632 | 277 | 167 | 11 | 8 | 257 | 162 | 426 | 1.23e-17 | 82.4 |
| Msa0127770 | AT5G15890.1 | 26.241 | 282 | 169 | 9 | 1 | 257 | 251 | 518 | 1.03e-16 | 79.7 |
| Msa0127770 | AT2G37720.1 | 25.685 | 292 | 169 | 14 | 1 | 261 | 208 | 482 | 3.57e-16 | 78.2 |
| Msa0127770 | AT2G14530.1 | 24.658 | 292 | 174 | 8 | 2 | 261 | 129 | 406 | 6.09e-16 | 77.0 |
| Msa0127770 | AT4G25360.1 | 24.221 | 289 | 180 | 11 | 1 | 257 | 239 | 520 | 3.74e-15 | 75.1 |
| Msa0127770 | AT4G25360.2 | 24.221 | 289 | 180 | 11 | 1 | 257 | 239 | 520 | 3.74e-15 | 75.1 |
| Msa0127770 | AT5G64470.3 | 23.656 | 279 | 184 | 8 | 1 | 258 | 121 | 391 | 9.37e-14 | 70.9 |
| Msa0127770 | AT4G23790.1 | 23.469 | 294 | 174 | 12 | 1 | 257 | 144 | 423 | 1.15e-11 | 64.7 |
Find 97 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACATCAATTGAATTCTTC+TGG | 0.180891 | 1_3:-57374334 | Msa0127770:CDS |
| TCCCTGGTGTGCCTGATATT+TGG | 0.189016 | 1_3:-57373554 | Msa0127770:CDS |
| GTGATTTCTCAGTTGGAAAA+TGG | 0.208372 | 1_3:-57374970 | Msa0127770:five_prime_UTR |
| GCTCATTGGTGGACTCATTC+TGG | 0.278727 | 1_3:-57374194 | Msa0127770:CDS |
| TGATTAAATTGTAGGCAAAA+TGG | 0.281278 | 1_3:-57373819 | Msa0127770:intron |
| ATTTCTTCCATGAATCTCTT+TGG | 0.290155 | 1_3:+57374993 | None:intergenic |
| AAAGTGGGTGGATTTGAATT+TGG | 0.291594 | 1_3:-57373971 | Msa0127770:CDS |
| AGCATTTCGTTCCAAATATC+AGG | 0.327867 | 1_3:+57373543 | None:intergenic |
| TTCTTCAGTTCTACCAATAG+TGG | 0.352484 | 1_3:+57374308 | None:intergenic |
| TTCAGCCACATGCATGTTCC+AGG | 0.356693 | 1_3:-57373759 | Msa0127770:CDS |
| GTAATATCCTGTAGATATAC+TGG | 0.367331 | 1_3:+57373693 | None:intergenic |
| GGACCAGTAGTAGTGCTAAA+AGG | 0.371991 | 1_3:-57373738 | Msa0127770:CDS |
| ATTCTTCTGGGCTCCACTAT+TGG | 0.373379 | 1_3:-57374321 | Msa0127770:CDS |
| GACATCAATTGAATTCTTCT+GGG | 0.378736 | 1_3:-57374333 | Msa0127770:CDS |
| TAATAAGAGAATTCTACATT+TGG | 0.381121 | 1_3:-57374276 | Msa0127770:CDS |
| TTGAAGAGAATGCAAGGTAT+TGG | 0.381566 | 1_3:-57374247 | Msa0127770:CDS |
| ATAGCATGGAAAGACATTAA+AGG | 0.392314 | 1_3:+57374442 | None:intergenic |
| TTCTTCCAATGCAAGCCAAC+TGG | 0.394214 | 1_3:+57375041 | None:intergenic |
| TGCAGCCATTGGTGCCTCCC+TGG | 0.399442 | 1_3:-57373570 | Msa0127770:CDS |
| TTTAATGTCTTTCCATGCTA+TGG | 0.404785 | 1_3:-57374440 | Msa0127770:intron |
| TTGCATTTGATTCAGCTCAT+TGG | 0.406976 | 1_3:-57374208 | Msa0127770:CDS |
| TATTCCAACTGACAGGAAAA+AGG | 0.407152 | 1_3:-57374479 | Msa0127770:CDS |
| TGTATTGAGTCCTTTCTCAT+AGG | 0.414458 | 1_3:+57373999 | None:intergenic |
| CATTTGATTCAGCTCATTGG+TGG | 0.419213 | 1_3:-57374205 | Msa0127770:CDS |
| AGCCAACTGGACACTTCCTC+TGG | 0.424797 | 1_3:+57375054 | None:intergenic |
| AAGAAATGTGATTTCTCAGT+TGG | 0.430768 | 1_3:-57374977 | Msa0127770:five_prime_UTR |
| TTTGATGCACTGAAGTATCT+TGG | 0.440296 | 1_3:-57374589 | Msa0127770:five_prime_UTR |
| AAATGGAAGTGGAAGCCATT+AGG | 0.444002 | 1_3:-57374848 | Msa0127770:five_prime_UTR |
| AGACATTAAAGGACCATCAT+AGG | 0.444756 | 1_3:+57374453 | None:intergenic |
| CATTTCTCATAATCTGAATC+CGG | 0.445205 | 1_3:+57374866 | None:intergenic |
| CTTGGGATGGAACAACCTAA+TGG | 0.446475 | 1_3:+57374833 | None:intergenic |
| AGTCCTCTGATTGCAGCCAT+TGG | 0.458504 | 1_3:-57373581 | Msa0127770:CDS |
| CGGATTCAGATTATGAGAAA+TGG | 0.459664 | 1_3:-57374865 | Msa0127770:five_prime_UTR |
| TTCTATAATGAGAAACCAAT+GGG | 0.459846 | 1_3:-57374530 | Msa0127770:CDS |
| GTGCAAACCAAAGAGATTCA+TGG | 0.466968 | 1_3:-57375000 | Msa0127770:five_prime_UTR |
| GTATGGCACCTAGACATAAC+AGG | 0.470822 | 1_3:-57373918 | Msa0127770:intron |
| AGTGTCCAGTTGGCTTGCAT+TGG | 0.472840 | 1_3:-57375046 | Msa0127770:five_prime_UTR |
| TTCCAAATATCAGGCACACC+AGG | 0.474779 | 1_3:+57373552 | None:intergenic |
| TCTCTTGTATGCTTAGTTCA+AGG | 0.493508 | 1_3:-57374505 | Msa0127770:CDS |
| CATCACAAACATGAATCAAA+TGG | 0.494804 | 1_3:-57374025 | Msa0127770:CDS |
| CAAATGGTTGCCTATGAGAA+AGG | 0.503172 | 1_3:-57374009 | Msa0127770:CDS |
| GAGATTTCCAGTATATCTAC+AGG | 0.504762 | 1_3:-57373700 | Msa0127770:CDS |
| GCAGTAACTTGTCAAAAGAA+TGG | 0.505516 | 1_3:-57374893 | Msa0127770:five_prime_UTR |
| GTTGGAAATGTTACAATCAA+AGG | 0.507595 | 1_3:-57373797 | Msa0127770:CDS |
| TAAATTGTAGGCAAAATGGT+TGG | 0.508760 | 1_3:-57373815 | Msa0127770:intron |
| ATGAGAAAGGACTCAATACA+TGG | 0.509591 | 1_3:-57373996 | Msa0127770:CDS |
| TTTAGCACTACTACTGGTCC+TGG | 0.509768 | 1_3:+57373741 | None:intergenic |
| TATTGGTAGAACTGAAGAAA+GGG | 0.514662 | 1_3:-57374304 | Msa0127770:CDS |
| AAGGAGTTATTCCAACTGAC+AGG | 0.516555 | 1_3:-57374486 | Msa0127770:CDS |
| TACCAGGTGGGATTATTACA+TGG | 0.524110 | 1_3:-57374061 | Msa0127770:intron |
| GCACACCAGGGAGGCACCAA+TGG | 0.532334 | 1_3:+57373565 | None:intergenic |
| CATCGTGTATGTGGATAAGA+AGG | 0.533976 | 1_3:+57373349 | None:intergenic |
| GTTACTGCAGTGGCGAGATA+AGG | 0.535012 | 1_3:+57374908 | None:intergenic |
| CAGATTATGAGAAATGGAAG+TGG | 0.537613 | 1_3:-57374859 | Msa0127770:five_prime_UTR |
| CTATTGGTAGAACTGAAGAA+AGG | 0.540879 | 1_3:-57374305 | Msa0127770:CDS |
| ACATCCTTCAGTGTATAGTA+AGG | 0.542161 | 1_3:-57373643 | Msa0127770:CDS |
| AGCATACAAGAGATTCCCAT+TGG | 0.544133 | 1_3:+57374515 | None:intergenic |
| GACTCAATACATGGGCAAAG+TGG | 0.544827 | 1_3:-57373987 | Msa0127770:CDS |
| ATGACTGCATTTAGAAGAGA+TGG | 0.549263 | 1_3:-57373666 | Msa0127770:CDS |
| GAGAGGCAGAAACAAGGTAA+TGG | 0.549704 | 1_3:-57373606 | Msa0127770:CDS |
| ATTCTATAATGAGAAACCAA+TGG | 0.552968 | 1_3:-57374531 | Msa0127770:CDS |
| ATTAATATCCTACCATAGCA+TGG | 0.553143 | 1_3:+57374428 | None:intergenic |
| CATTAGGTTGTTCCATCCCA+AGG | 0.558505 | 1_3:-57374832 | Msa0127770:intron |
| AGGTAATAAGTGAAGAAGAG+AGG | 0.559968 | 1_3:-57373623 | Msa0127770:CDS |
| GACAGTTGGAATCATAGAGA+GGG | 0.562013 | 1_3:+57374930 | None:intergenic |
| AGTACGTACCTGTTATGTCT+AGG | 0.567486 | 1_3:+57373910 | None:intergenic |
| GCACCAATGGCTGCAATCAG+AGG | 0.571338 | 1_3:+57373578 | None:intergenic |
| GTTTCATCATCACCTTGGGA+TGG | 0.572029 | 1_3:+57374820 | None:intergenic |
| TTGTCAAAAGAATGGACGGC+CGG | 0.574038 | 1_3:-57374885 | Msa0127770:five_prime_UTR |
| GGAAAGAGAATGATGTTGGT+GGG | 0.575995 | 1_3:-57374556 | Msa0127770:CDS |
| ACTCAATACATGGGCAAAGT+GGG | 0.582566 | 1_3:-57373986 | Msa0127770:CDS |
| GAGAGGAAAGAGAATGATGT+TGG | 0.587409 | 1_3:-57374560 | Msa0127770:CDS |
| AATGGCTGCAATCAGAGGAC+TGG | 0.587580 | 1_3:+57373583 | None:intergenic |
| GAGAATGCAAGGTATTGGAA+AGG | 0.589108 | 1_3:-57374242 | Msa0127770:CDS |
| ATGTGGATAAGAAGGAAGGA+AGG | 0.592817 | 1_3:+57373357 | None:intergenic |
| ATCCAGAGGAAGTGTCCAGT+TGG | 0.594248 | 1_3:-57375056 | Msa0127770:five_prime_UTR |
| ATTTGATTGAAGAGAATGCA+AGG | 0.595081 | 1_3:-57374253 | Msa0127770:CDS |
| AAGTATCTTGGTAAAATGAG+AGG | 0.596417 | 1_3:-57374577 | Msa0127770:exon |
| GTGTATGTGGATAAGAAGGA+AGG | 0.597039 | 1_3:+57373353 | None:intergenic |
| AGGTGGGATTATTACATGGA+AGG | 0.598017 | 1_3:-57374057 | Msa0127770:CDS |
| CAATACATGGGCAAAGTGGG+TGG | 0.598037 | 1_3:-57373983 | Msa0127770:CDS |
| ATTACCTTACTATACACTGA+AGG | 0.598619 | 1_3:+57373639 | None:intergenic |
| GTTGGAATCATAGAGAGGGT+AGG | 0.612157 | 1_3:+57374934 | None:intergenic |
| TAACTTGTCAAAAGAATGGA+CGG | 0.614689 | 1_3:-57374889 | Msa0127770:five_prime_UTR |
| GGAACGAAATGCTGAGTGCA+TGG | 0.615044 | 1_3:-57373533 | Msa0127770:CDS |
| GGATTGTAAGATCAGTAAGT+CGG | 0.632612 | 1_3:+57373378 | None:intergenic |
| GAAGAAGAGAGGCAGAAACA+AGG | 0.633633 | 1_3:-57373612 | Msa0127770:CDS |
| GGACAGTTGGAATCATAGAG+AGG | 0.634353 | 1_3:+57374929 | None:intergenic |
| TCCAAATATCAGGCACACCA+GGG | 0.635948 | 1_3:+57373553 | None:intergenic |
| AGTGGCGAGATAAGGACAGT+TGG | 0.638580 | 1_3:+57374916 | None:intergenic |
| AGGAAAGAGAATGATGTTGG+TGG | 0.644337 | 1_3:-57374557 | Msa0127770:CDS |
| AGTAGTAGTGCTAAAAGGAG+TGG | 0.649261 | 1_3:-57373733 | Msa0127770:CDS |
| TGAGAAAGGACTCAATACAT+GGG | 0.677756 | 1_3:-57373995 | Msa0127770:CDS |
| CTGGTCCTGGAACATGCATG+TGG | 0.678164 | 1_3:+57373754 | None:intergenic |
| ATTATCACTGATCAATCCAG+AGG | 0.696073 | 1_3:-57375070 | Msa0127770:five_prime_UTR |
| AAATATCAGGCACACCAGGG+AGG | 0.749580 | 1_3:+57373556 | None:intergenic |
| AGAAACTGAAGATGTCAACA+TGG | 0.749769 | 1_3:-57375022 | Msa0127770:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAATAAAATATTGATGA+AGG | + | chr1_3:57374618-57374637 | None:intergenic | 15.0% |
| !! | TTTAACTATAACTAAAAAGA+TGG | - | chr1_3:57374979-57374998 | Msa0127770:five_prime_UTR | 15.0% |
| !! | CAAAAATAAAATATTGATGA+AGG | + | chr1_3:57374618-57374637 | None:intergenic | 15.0% |
| !! | TTTAACTATAACTAAAAAGA+TGG | - | chr1_3:57374979-57374998 | Msa0127770:five_prime_UTR | 15.0% |
| !! | ATAAAAATGACAGTAAATGA+AGG | + | chr1_3:57373373-57373392 | None:intergenic | 20.0% |
| !!! | CATTTTTAGAAGGAAAATTA+AGG | + | chr1_3:57374097-57374116 | None:intergenic | 20.0% |
| !!! | GTAAGTAAATCATTTTTAGA+AGG | + | chr1_3:57374107-57374126 | None:intergenic | 20.0% |
| !! | TAATAAGAGAATTCTACATT+TGG | - | chr1_3:57374212-57374231 | Msa0127770:CDS | 20.0% |
| !!! | TAATCATTTTTACATCCTAA+TGG | - | chr1_3:57374388-57374407 | Msa0127770:intron | 20.0% |
| !! | AGAACATTTGATTAAATTGT+AGG | - | chr1_3:57374661-57374680 | Msa0127770:intron | 20.0% |
| !! | ATAAAAATGACAGTAAATGA+AGG | + | chr1_3:57373373-57373392 | None:intergenic | 20.0% |
| !!! | CATTTTTAGAAGGAAAATTA+AGG | + | chr1_3:57374097-57374116 | None:intergenic | 20.0% |
| !!! | GTAAGTAAATCATTTTTAGA+AGG | + | chr1_3:57374107-57374126 | None:intergenic | 20.0% |
| !! | TAATAAGAGAATTCTACATT+TGG | - | chr1_3:57374212-57374231 | Msa0127770:CDS | 20.0% |
| !!! | TAATCATTTTTACATCCTAA+TGG | - | chr1_3:57374388-57374407 | Msa0127770:intron | 20.0% |
| !! | AGAACATTTGATTAAATTGT+AGG | - | chr1_3:57374661-57374680 | Msa0127770:intron | 20.0% |
| !!! | CTGTCATTTTTATTCTTCTT+AGG | - | chr1_3:57373380-57373399 | Msa0127770:three_prime_UTR | 25.0% |
| ! | AAGCATGTAAGAAAACAAAA+AGG | + | chr1_3:57373714-57373733 | None:intergenic | 25.0% |
| ! | ATTCTATAATGAGAAACCAA+TGG | - | chr1_3:57373957-57373976 | Msa0127770:CDS | 25.0% |
| ! | TTCTATAATGAGAAACCAAT+GGG | - | chr1_3:57373958-57373977 | Msa0127770:CDS | 25.0% |
| ! | ACATGTTGTTCATTTATTAC+AGG | - | chr1_3:57374125-57374144 | Msa0127770:intron | 25.0% |
| ! | TGATTAAATTGTAGGCAAAA+TGG | - | chr1_3:57374669-57374688 | Msa0127770:intron | 25.0% |
| ! | CTATAACTAAAAAGATGGAA+TGG | - | chr1_3:57374984-57375003 | Msa0127770:five_prime_UTR | 25.0% |
| !!! | CTGTCATTTTTATTCTTCTT+AGG | - | chr1_3:57373380-57373399 | Msa0127770:three_prime_UTR | 25.0% |
| ! | AAGCATGTAAGAAAACAAAA+AGG | + | chr1_3:57373714-57373733 | None:intergenic | 25.0% |
| ! | ATTCTATAATGAGAAACCAA+TGG | - | chr1_3:57373957-57373976 | Msa0127770:CDS | 25.0% |
| ! | TTCTATAATGAGAAACCAAT+GGG | - | chr1_3:57373958-57373977 | Msa0127770:CDS | 25.0% |
| ! | ACATGTTGTTCATTTATTAC+AGG | - | chr1_3:57374125-57374144 | Msa0127770:intron | 25.0% |
| ! | TGATTAAATTGTAGGCAAAA+TGG | - | chr1_3:57374669-57374688 | Msa0127770:intron | 25.0% |
| ! | CTATAACTAAAAAGATGGAA+TGG | - | chr1_3:57374984-57375003 | Msa0127770:five_prime_UTR | 25.0% |
| ATTTCTTCCATGAATCTCTT+TGG | + | chr1_3:57373498-57373517 | None:intergenic | 30.0% | |
| AAGAAATGTGATTTCTCAGT+TGG | - | chr1_3:57373511-57373530 | Msa0127770:exon | 30.0% | |
| ! | TAACTTGTCAAAAGAATGGA+CGG | - | chr1_3:57373599-57373618 | Msa0127770:CDS | 30.0% |
| CATTTCTCATAATCTGAATC+CGG | + | chr1_3:57373625-57373644 | None:intergenic | 30.0% | |
| TAATGTTTCATCATCACCTT+GGG | + | chr1_3:57373675-57373694 | None:intergenic | 30.0% | |
| TTAATGTTTCATCATCACCT+TGG | + | chr1_3:57373676-57373695 | None:intergenic | 30.0% | |
| ! | TGCAACATTTTTGACATGTA+TGG | - | chr1_3:57373738-57373757 | Msa0127770:CDS | 30.0% |
| AGAAGCTAAATTTATCAGCA+TGG | + | chr1_3:57373863-57373882 | None:intergenic | 30.0% | |
| AAGTATCTTGGTAAAATGAG+AGG | - | chr1_3:57373911-57373930 | Msa0127770:intron | 30.0% | |
| ATAGCATGGAAAGACATTAA+AGG | + | chr1_3:57374049-57374068 | None:intergenic | 30.0% | |
| TTTAATGTCTTTCCATGCTA+TGG | - | chr1_3:57374048-57374067 | Msa0127770:CDS | 30.0% | |
| ATTAATATCCTACCATAGCA+TGG | + | chr1_3:57374063-57374082 | None:intergenic | 30.0% | |
| AGACATCAATTGAATTCTTC+TGG | - | chr1_3:57374154-57374173 | Msa0127770:intron | 30.0% | |
| GACATCAATTGAATTCTTCT+GGG | - | chr1_3:57374155-57374174 | Msa0127770:intron | 30.0% | |
| TATTGGTAGAACTGAAGAAA+GGG | - | chr1_3:57374184-57374203 | Msa0127770:CDS | 30.0% | |
| ATTTGATTGAAGAGAATGCA+AGG | - | chr1_3:57374235-57374254 | Msa0127770:CDS | 30.0% | |
| ! | TAATCAAGACTGATTCCATT+AGG | + | chr1_3:57374406-57374425 | None:intergenic | 30.0% |
| AATCAGTCTTGATTAATACC+AGG | - | chr1_3:57374411-57374430 | Msa0127770:intron | 30.0% | |
| CATCACAAACATGAATCAAA+TGG | - | chr1_3:57374463-57374482 | Msa0127770:CDS | 30.0% | |
| TAAATTGTAGGCAAAATGGT+TGG | - | chr1_3:57374673-57374692 | Msa0127770:intron | 30.0% | |
| GTTGGAAATGTTACAATCAA+AGG | - | chr1_3:57374691-57374710 | Msa0127770:intron | 30.0% | |
| ! | ATGTGGCTGAAATATTTTAC+AGG | + | chr1_3:57374720-57374739 | None:intergenic | 30.0% |
| GTAATATCCTGTAGATATAC+TGG | + | chr1_3:57374798-57374817 | None:intergenic | 30.0% | |
| ATTACCTTACTATACACTGA+AGG | + | chr1_3:57374852-57374871 | None:intergenic | 30.0% | |
| !!! | GAATGGATCTGAGTTTTTTA+TGG | - | chr1_3:57375001-57375020 | Msa0127770:five_prime_UTR | 30.0% |
| ATTTCTTCCATGAATCTCTT+TGG | + | chr1_3:57373498-57373517 | None:intergenic | 30.0% | |
| AAGAAATGTGATTTCTCAGT+TGG | - | chr1_3:57373511-57373530 | Msa0127770:exon | 30.0% | |
| ! | TAACTTGTCAAAAGAATGGA+CGG | - | chr1_3:57373599-57373618 | Msa0127770:CDS | 30.0% |
| CATTTCTCATAATCTGAATC+CGG | + | chr1_3:57373625-57373644 | None:intergenic | 30.0% | |
| TAATGTTTCATCATCACCTT+GGG | + | chr1_3:57373675-57373694 | None:intergenic | 30.0% | |
| TTAATGTTTCATCATCACCT+TGG | + | chr1_3:57373676-57373695 | None:intergenic | 30.0% | |
| ! | TGCAACATTTTTGACATGTA+TGG | - | chr1_3:57373738-57373757 | Msa0127770:CDS | 30.0% |
| AGAAGCTAAATTTATCAGCA+TGG | + | chr1_3:57373863-57373882 | None:intergenic | 30.0% | |
| AAGTATCTTGGTAAAATGAG+AGG | - | chr1_3:57373911-57373930 | Msa0127770:intron | 30.0% | |
| ATAGCATGGAAAGACATTAA+AGG | + | chr1_3:57374049-57374068 | None:intergenic | 30.0% | |
| TTTAATGTCTTTCCATGCTA+TGG | - | chr1_3:57374048-57374067 | Msa0127770:CDS | 30.0% | |
| ATTAATATCCTACCATAGCA+TGG | + | chr1_3:57374063-57374082 | None:intergenic | 30.0% | |
| AGACATCAATTGAATTCTTC+TGG | - | chr1_3:57374154-57374173 | Msa0127770:intron | 30.0% | |
| GACATCAATTGAATTCTTCT+GGG | - | chr1_3:57374155-57374174 | Msa0127770:intron | 30.0% | |
| TATTGGTAGAACTGAAGAAA+GGG | - | chr1_3:57374184-57374203 | Msa0127770:CDS | 30.0% | |
| ATTTGATTGAAGAGAATGCA+AGG | - | chr1_3:57374235-57374254 | Msa0127770:CDS | 30.0% | |
| ! | TAATCAAGACTGATTCCATT+AGG | + | chr1_3:57374406-57374425 | None:intergenic | 30.0% |
| AATCAGTCTTGATTAATACC+AGG | - | chr1_3:57374411-57374430 | Msa0127770:intron | 30.0% | |
| CATCACAAACATGAATCAAA+TGG | - | chr1_3:57374463-57374482 | Msa0127770:CDS | 30.0% | |
| TAAATTGTAGGCAAAATGGT+TGG | - | chr1_3:57374673-57374692 | Msa0127770:intron | 30.0% | |
| GTTGGAAATGTTACAATCAA+AGG | - | chr1_3:57374691-57374710 | Msa0127770:intron | 30.0% | |
| ! | ATGTGGCTGAAATATTTTAC+AGG | + | chr1_3:57374720-57374739 | None:intergenic | 30.0% |
| GTAATATCCTGTAGATATAC+TGG | + | chr1_3:57374798-57374817 | None:intergenic | 30.0% | |
| ATTACCTTACTATACACTGA+AGG | + | chr1_3:57374852-57374871 | None:intergenic | 30.0% | |
| !!! | GAATGGATCTGAGTTTTTTA+TGG | - | chr1_3:57375001-57375020 | Msa0127770:five_prime_UTR | 30.0% |
| ATTATCACTGATCAATCCAG+AGG | - | chr1_3:57373418-57373437 | Msa0127770:three_prime_UTR | 35.0% | |
| AGAAACTGAAGATGTCAACA+TGG | - | chr1_3:57373466-57373485 | Msa0127770:three_prime_UTR | 35.0% | |
| GTGATTTCTCAGTTGGAAAA+TGG | - | chr1_3:57373518-57373537 | Msa0127770:exon | 35.0% | |
| ! | GCAGTAACTTGTCAAAAGAA+TGG | - | chr1_3:57373595-57373614 | Msa0127770:CDS | 35.0% |
| CGGATTCAGATTATGAGAAA+TGG | - | chr1_3:57373623-57373642 | Msa0127770:CDS | 35.0% | |
| CAGATTATGAGAAATGGAAG+TGG | - | chr1_3:57373629-57373648 | Msa0127770:CDS | 35.0% | |
| ! | TTTGATGCACTGAAGTATCT+TGG | - | chr1_3:57373899-57373918 | Msa0127770:intron | 35.0% |
| TCTCTTGTATGCTTAGTTCA+AGG | - | chr1_3:57373983-57374002 | Msa0127770:CDS | 35.0% | |
| TATTCCAACTGACAGGAAAA+AGG | - | chr1_3:57374009-57374028 | Msa0127770:CDS | 35.0% | |
| AGACATTAAAGGACCATCAT+AGG | + | chr1_3:57374038-57374057 | None:intergenic | 35.0% | |
| TTCTTCAGTTCTACCAATAG+TGG | + | chr1_3:57374183-57374202 | None:intergenic | 35.0% | |
| CTATTGGTAGAACTGAAGAA+AGG | - | chr1_3:57374183-57374202 | Msa0127770:CDS | 35.0% | |
| TTGAAGAGAATGCAAGGTAT+TGG | - | chr1_3:57374241-57374260 | Msa0127770:CDS | 35.0% | |
| TTGCATTTGATTCAGCTCAT+TGG | - | chr1_3:57374280-57374299 | Msa0127770:CDS | 35.0% | |
| AGTCTTGATTAATACCAGGT+GGG | - | chr1_3:57374415-57374434 | Msa0127770:intron | 35.0% | |
| TGTATTGAGTCCTTTCTCAT+AGG | + | chr1_3:57374492-57374511 | None:intergenic | 35.0% | |
| ATGAGAAAGGACTCAATACA+TGG | - | chr1_3:57374492-57374511 | Msa0127770:CDS | 35.0% | |
| TGAGAAAGGACTCAATACAT+GGG | - | chr1_3:57374493-57374512 | Msa0127770:CDS | 35.0% | |
| ! | AAAGTGGGTGGATTTGAATT+TGG | - | chr1_3:57374517-57374536 | Msa0127770:CDS | 35.0% |
| ! | CATACTTCTAAAAACGACTC+GGG | + | chr1_3:57374555-57374574 | None:intergenic | 35.0% |
| ! | CCATACTTCTAAAAACGACT+CGG | + | chr1_3:57374556-57374575 | None:intergenic | 35.0% |
| GAGATTTCCAGTATATCTAC+AGG | - | chr1_3:57374788-57374807 | Msa0127770:intron | 35.0% | |
| ATGACTGCATTTAGAAGAGA+TGG | - | chr1_3:57374822-57374841 | Msa0127770:intron | 35.0% | |
| ACATCCTTCAGTGTATAGTA+AGG | - | chr1_3:57374845-57374864 | Msa0127770:five_prime_UTR | 35.0% | |
| AGGTAATAAGTGAAGAAGAG+AGG | - | chr1_3:57374865-57374884 | Msa0127770:five_prime_UTR | 35.0% | |
| AGCATTTCGTTCCAAATATC+AGG | + | chr1_3:57374948-57374967 | None:intergenic | 35.0% | |
| GGATTGTAAGATCAGTAAGT+CGG | + | chr1_3:57375113-57375132 | None:intergenic | 35.0% | |
| ATTATCACTGATCAATCCAG+AGG | - | chr1_3:57373418-57373437 | Msa0127770:three_prime_UTR | 35.0% | |
| AGAAACTGAAGATGTCAACA+TGG | - | chr1_3:57373466-57373485 | Msa0127770:three_prime_UTR | 35.0% | |
| GTGATTTCTCAGTTGGAAAA+TGG | - | chr1_3:57373518-57373537 | Msa0127770:exon | 35.0% | |
| ! | GCAGTAACTTGTCAAAAGAA+TGG | - | chr1_3:57373595-57373614 | Msa0127770:CDS | 35.0% |
| CGGATTCAGATTATGAGAAA+TGG | - | chr1_3:57373623-57373642 | Msa0127770:CDS | 35.0% | |
| CAGATTATGAGAAATGGAAG+TGG | - | chr1_3:57373629-57373648 | Msa0127770:CDS | 35.0% | |
| ! | TTTGATGCACTGAAGTATCT+TGG | - | chr1_3:57373899-57373918 | Msa0127770:intron | 35.0% |
| TCTCTTGTATGCTTAGTTCA+AGG | - | chr1_3:57373983-57374002 | Msa0127770:CDS | 35.0% | |
| TATTCCAACTGACAGGAAAA+AGG | - | chr1_3:57374009-57374028 | Msa0127770:CDS | 35.0% | |
| AGACATTAAAGGACCATCAT+AGG | + | chr1_3:57374038-57374057 | None:intergenic | 35.0% | |
| TTCTTCAGTTCTACCAATAG+TGG | + | chr1_3:57374183-57374202 | None:intergenic | 35.0% | |
| CTATTGGTAGAACTGAAGAA+AGG | - | chr1_3:57374183-57374202 | Msa0127770:CDS | 35.0% | |
| TTGAAGAGAATGCAAGGTAT+TGG | - | chr1_3:57374241-57374260 | Msa0127770:CDS | 35.0% | |
| TTGCATTTGATTCAGCTCAT+TGG | - | chr1_3:57374280-57374299 | Msa0127770:CDS | 35.0% | |
| AGTCTTGATTAATACCAGGT+GGG | - | chr1_3:57374415-57374434 | Msa0127770:intron | 35.0% | |
| TGTATTGAGTCCTTTCTCAT+AGG | + | chr1_3:57374492-57374511 | None:intergenic | 35.0% | |
| ATGAGAAAGGACTCAATACA+TGG | - | chr1_3:57374492-57374511 | Msa0127770:CDS | 35.0% | |
| TGAGAAAGGACTCAATACAT+GGG | - | chr1_3:57374493-57374512 | Msa0127770:CDS | 35.0% | |
| ! | AAAGTGGGTGGATTTGAATT+TGG | - | chr1_3:57374517-57374536 | Msa0127770:CDS | 35.0% |
| ! | CATACTTCTAAAAACGACTC+GGG | + | chr1_3:57374555-57374574 | None:intergenic | 35.0% |
| ! | CCATACTTCTAAAAACGACT+CGG | + | chr1_3:57374556-57374575 | None:intergenic | 35.0% |
| GAGATTTCCAGTATATCTAC+AGG | - | chr1_3:57374788-57374807 | Msa0127770:intron | 35.0% | |
| ATGACTGCATTTAGAAGAGA+TGG | - | chr1_3:57374822-57374841 | Msa0127770:intron | 35.0% | |
| ACATCCTTCAGTGTATAGTA+AGG | - | chr1_3:57374845-57374864 | Msa0127770:five_prime_UTR | 35.0% | |
| AGGTAATAAGTGAAGAAGAG+AGG | - | chr1_3:57374865-57374884 | Msa0127770:five_prime_UTR | 35.0% | |
| AGCATTTCGTTCCAAATATC+AGG | + | chr1_3:57374948-57374967 | None:intergenic | 35.0% | |
| GGATTGTAAGATCAGTAAGT+CGG | + | chr1_3:57375113-57375132 | None:intergenic | 35.0% | |
| GTGCAAACCAAAGAGATTCA+TGG | - | chr1_3:57373488-57373507 | Msa0127770:three_prime_UTR | 40.0% | |
| GACAGTTGGAATCATAGAGA+GGG | + | chr1_3:57373561-57373580 | None:intergenic | 40.0% | |
| ! | CTTTTGACAAGTTACTGCAG+TGG | + | chr1_3:57373593-57373612 | None:intergenic | 40.0% |
| AAATGGAAGTGGAAGCCATT+AGG | - | chr1_3:57373640-57373659 | Msa0127770:CDS | 40.0% | |
| AGCATGGTTTACGTGTGTTT+GGG | + | chr1_3:57373847-57373866 | None:intergenic | 40.0% | |
| ! | AGCTTCTCGATGACATTTTC+AGG | - | chr1_3:57373876-57373895 | Msa0127770:intron | 40.0% |
| GAGAGGAAAGAGAATGATGT+TGG | - | chr1_3:57373928-57373947 | Msa0127770:CDS | 40.0% | |
| AGGAAAGAGAATGATGTTGG+TGG | - | chr1_3:57373931-57373950 | Msa0127770:CDS | 40.0% | |
| GGAAAGAGAATGATGTTGGT+GGG | - | chr1_3:57373932-57373951 | Msa0127770:CDS | 40.0% | |
| AGCATACAAGAGATTCCCAT+TGG | + | chr1_3:57373976-57373995 | None:intergenic | 40.0% | |
| AAGGAGTTATTCCAACTGAC+AGG | - | chr1_3:57374002-57374021 | Msa0127770:CDS | 40.0% | |
| AGGAAAAAGGTCACCTATGA+TGG | - | chr1_3:57374022-57374041 | Msa0127770:CDS | 40.0% | |
| ATGTCTTTCCATGCTATGGT+AGG | - | chr1_3:57374052-57374071 | Msa0127770:CDS | 40.0% | |
| !! | GAGAATGCAAGGTATTGGAA+AGG | - | chr1_3:57374246-57374265 | Msa0127770:CDS | 40.0% |
| CATTTGATTCAGCTCATTGG+TGG | - | chr1_3:57374283-57374302 | Msa0127770:CDS | 40.0% | |
| CAGTCTTGATTAATACCAGG+TGG | - | chr1_3:57374414-57374433 | Msa0127770:intron | 40.0% | |
| TACCAGGTGGGATTATTACA+TGG | - | chr1_3:57374427-57374446 | Msa0127770:intron | 40.0% | |
| TTCCATGTAATAATCCCACC+TGG | + | chr1_3:57374432-57374451 | None:intergenic | 40.0% | |
| AGGTGGGATTATTACATGGA+AGG | - | chr1_3:57374431-57374450 | Msa0127770:intron | 40.0% | |
| CAAATGGTTGCCTATGAGAA+AGG | - | chr1_3:57374479-57374498 | Msa0127770:CDS | 40.0% | |
| ACTCAATACATGGGCAAAGT+GGG | - | chr1_3:57374502-57374521 | Msa0127770:CDS | 40.0% | |
| !!! | CCGAGTCGTTTTTAGAAGTA+TGG | - | chr1_3:57374553-57374572 | Msa0127770:CDS | 40.0% |
| AGTACGTACCTGTTATGTCT+AGG | + | chr1_3:57374581-57374600 | None:intergenic | 40.0% | |
| ! | ACTCCTTTTAGCACTACTAC+TGG | + | chr1_3:57374756-57374775 | None:intergenic | 40.0% |
| AGTAGTAGTGCTAAAAGGAG+TGG | - | chr1_3:57374755-57374774 | Msa0127770:intron | 40.0% | |
| GTGCAAACCAAAGAGATTCA+TGG | - | chr1_3:57373488-57373507 | Msa0127770:three_prime_UTR | 40.0% | |
| GACAGTTGGAATCATAGAGA+GGG | + | chr1_3:57373561-57373580 | None:intergenic | 40.0% | |
| ! | CTTTTGACAAGTTACTGCAG+TGG | + | chr1_3:57373593-57373612 | None:intergenic | 40.0% |
| AAATGGAAGTGGAAGCCATT+AGG | - | chr1_3:57373640-57373659 | Msa0127770:CDS | 40.0% | |
| AGCATGGTTTACGTGTGTTT+GGG | + | chr1_3:57373847-57373866 | None:intergenic | 40.0% | |
| ! | AGCTTCTCGATGACATTTTC+AGG | - | chr1_3:57373876-57373895 | Msa0127770:intron | 40.0% |
| GAGAGGAAAGAGAATGATGT+TGG | - | chr1_3:57373928-57373947 | Msa0127770:CDS | 40.0% | |
| AGGAAAGAGAATGATGTTGG+TGG | - | chr1_3:57373931-57373950 | Msa0127770:CDS | 40.0% | |
| GGAAAGAGAATGATGTTGGT+GGG | - | chr1_3:57373932-57373951 | Msa0127770:CDS | 40.0% | |
| AGCATACAAGAGATTCCCAT+TGG | + | chr1_3:57373976-57373995 | None:intergenic | 40.0% | |
| AAGGAGTTATTCCAACTGAC+AGG | - | chr1_3:57374002-57374021 | Msa0127770:CDS | 40.0% | |
| AGGAAAAAGGTCACCTATGA+TGG | - | chr1_3:57374022-57374041 | Msa0127770:CDS | 40.0% | |
| ATGTCTTTCCATGCTATGGT+AGG | - | chr1_3:57374052-57374071 | Msa0127770:CDS | 40.0% | |
| !! | GAGAATGCAAGGTATTGGAA+AGG | - | chr1_3:57374246-57374265 | Msa0127770:CDS | 40.0% |
| CATTTGATTCAGCTCATTGG+TGG | - | chr1_3:57374283-57374302 | Msa0127770:CDS | 40.0% | |
| CAGTCTTGATTAATACCAGG+TGG | - | chr1_3:57374414-57374433 | Msa0127770:intron | 40.0% | |
| TACCAGGTGGGATTATTACA+TGG | - | chr1_3:57374427-57374446 | Msa0127770:intron | 40.0% | |
| TTCCATGTAATAATCCCACC+TGG | + | chr1_3:57374432-57374451 | None:intergenic | 40.0% | |
| AGGTGGGATTATTACATGGA+AGG | - | chr1_3:57374431-57374450 | Msa0127770:intron | 40.0% | |
| CAAATGGTTGCCTATGAGAA+AGG | - | chr1_3:57374479-57374498 | Msa0127770:CDS | 40.0% | |
| ACTCAATACATGGGCAAAGT+GGG | - | chr1_3:57374502-57374521 | Msa0127770:CDS | 40.0% | |
| !!! | CCGAGTCGTTTTTAGAAGTA+TGG | - | chr1_3:57374553-57374572 | Msa0127770:CDS | 40.0% |
| AGTACGTACCTGTTATGTCT+AGG | + | chr1_3:57374581-57374600 | None:intergenic | 40.0% | |
| ! | ACTCCTTTTAGCACTACTAC+TGG | + | chr1_3:57374756-57374775 | None:intergenic | 40.0% |
| AGTAGTAGTGCTAAAAGGAG+TGG | - | chr1_3:57374755-57374774 | Msa0127770:intron | 40.0% | |
| TTCTTCCAATGCAAGCCAAC+TGG | + | chr1_3:57373450-57373469 | None:intergenic | 45.0% | |
| GTTGGAATCATAGAGAGGGT+AGG | + | chr1_3:57373557-57373576 | None:intergenic | 45.0% | |
| GGACAGTTGGAATCATAGAG+AGG | + | chr1_3:57373562-57373581 | None:intergenic | 45.0% | |
| TTGTCAAAAGAATGGACGGC+CGG | - | chr1_3:57373603-57373622 | Msa0127770:CDS | 45.0% | |
| CTTGGGATGGAACAACCTAA+TGG | + | chr1_3:57373658-57373677 | None:intergenic | 45.0% | |
| ! | CATTAGGTTGTTCCATCCCA+AGG | - | chr1_3:57373656-57373675 | Msa0127770:CDS | 45.0% |
| GTTTCATCATCACCTTGGGA+TGG | + | chr1_3:57373671-57373690 | None:intergenic | 45.0% | |
| CAGCATGGTTTACGTGTGTT+TGG | + | chr1_3:57373848-57373867 | None:intergenic | 45.0% | |
| ! | GTGACCTTTTTCCTGTCAGT+TGG | + | chr1_3:57374016-57374035 | None:intergenic | 45.0% |
| ATTCTTCTGGGCTCCACTAT+TGG | - | chr1_3:57374167-57374186 | Msa0127770:intron | 45.0% | |
| GACTCAATACATGGGCAAAG+TGG | - | chr1_3:57374501-57374520 | Msa0127770:CDS | 45.0% | |
| !! | AAAACGACTCGGGTTTTTCG+AGG | + | chr1_3:57374545-57374564 | None:intergenic | 45.0% |
| GTATGGCACCTAGACATAAC+AGG | - | chr1_3:57374570-57374589 | Msa0127770:exon | 45.0% | |
| TTTAGCACTACTACTGGTCC+TGG | + | chr1_3:57374750-57374769 | None:intergenic | 45.0% | |
| GGACCAGTAGTAGTGCTAAA+AGG | - | chr1_3:57374750-57374769 | Msa0127770:intron | 45.0% | |
| GAAGAAGAGAGGCAGAAACA+AGG | - | chr1_3:57374876-57374895 | Msa0127770:five_prime_UTR | 45.0% | |
| GAGAGGCAGAAACAAGGTAA+TGG | - | chr1_3:57374882-57374901 | Msa0127770:five_prime_UTR | 45.0% | |
| TCCAAATATCAGGCACACCA+GGG | + | chr1_3:57374938-57374957 | None:intergenic | 45.0% | |
| TTCCAAATATCAGGCACACC+AGG | + | chr1_3:57374939-57374958 | None:intergenic | 45.0% | |
| TTCTTCCAATGCAAGCCAAC+TGG | + | chr1_3:57373450-57373469 | None:intergenic | 45.0% | |
| GTTGGAATCATAGAGAGGGT+AGG | + | chr1_3:57373557-57373576 | None:intergenic | 45.0% | |
| GGACAGTTGGAATCATAGAG+AGG | + | chr1_3:57373562-57373581 | None:intergenic | 45.0% | |
| TTGTCAAAAGAATGGACGGC+CGG | - | chr1_3:57373603-57373622 | Msa0127770:CDS | 45.0% | |
| CTTGGGATGGAACAACCTAA+TGG | + | chr1_3:57373658-57373677 | None:intergenic | 45.0% | |
| ! | CATTAGGTTGTTCCATCCCA+AGG | - | chr1_3:57373656-57373675 | Msa0127770:CDS | 45.0% |
| GTTTCATCATCACCTTGGGA+TGG | + | chr1_3:57373671-57373690 | None:intergenic | 45.0% | |
| CAGCATGGTTTACGTGTGTT+TGG | + | chr1_3:57373848-57373867 | None:intergenic | 45.0% | |
| ! | GTGACCTTTTTCCTGTCAGT+TGG | + | chr1_3:57374016-57374035 | None:intergenic | 45.0% |
| ATTCTTCTGGGCTCCACTAT+TGG | - | chr1_3:57374167-57374186 | Msa0127770:intron | 45.0% | |
| GACTCAATACATGGGCAAAG+TGG | - | chr1_3:57374501-57374520 | Msa0127770:CDS | 45.0% | |
| !! | AAAACGACTCGGGTTTTTCG+AGG | + | chr1_3:57374545-57374564 | None:intergenic | 45.0% |
| GTATGGCACCTAGACATAAC+AGG | - | chr1_3:57374570-57374589 | Msa0127770:exon | 45.0% | |
| TTTAGCACTACTACTGGTCC+TGG | + | chr1_3:57374750-57374769 | None:intergenic | 45.0% | |
| GGACCAGTAGTAGTGCTAAA+AGG | - | chr1_3:57374750-57374769 | Msa0127770:intron | 45.0% | |
| GAAGAAGAGAGGCAGAAACA+AGG | - | chr1_3:57374876-57374895 | Msa0127770:five_prime_UTR | 45.0% | |
| GAGAGGCAGAAACAAGGTAA+TGG | - | chr1_3:57374882-57374901 | Msa0127770:five_prime_UTR | 45.0% | |
| TCCAAATATCAGGCACACCA+GGG | + | chr1_3:57374938-57374957 | None:intergenic | 45.0% | |
| TTCCAAATATCAGGCACACC+AGG | + | chr1_3:57374939-57374958 | None:intergenic | 45.0% | |
| !! | ATCCAGAGGAAGTGTCCAGT+TGG | - | chr1_3:57373432-57373451 | Msa0127770:three_prime_UTR | 50.0% |
| !! | AGTGTCCAGTTGGCTTGCAT+TGG | - | chr1_3:57373442-57373461 | Msa0127770:three_prime_UTR | 50.0% |
| AGTGGCGAGATAAGGACAGT+TGG | + | chr1_3:57373575-57373594 | None:intergenic | 50.0% | |
| GTTACTGCAGTGGCGAGATA+AGG | + | chr1_3:57373583-57373602 | None:intergenic | 50.0% | |
| !! | GCTCATTGGTGGACTCATTC+TGG | - | chr1_3:57374294-57374313 | Msa0127770:CDS | 50.0% |
| CAATACATGGGCAAAGTGGG+TGG | - | chr1_3:57374505-57374524 | Msa0127770:CDS | 50.0% | |
| TTCAGCCACATGCATGTTCC+AGG | - | chr1_3:57374729-57374748 | Msa0127770:intron | 50.0% | |
| AATGGCTGCAATCAGAGGAC+TGG | + | chr1_3:57374908-57374927 | None:intergenic | 50.0% | |
| AGTCCTCTGATTGCAGCCAT+TGG | - | chr1_3:57374907-57374926 | Msa0127770:five_prime_UTR | 50.0% | |
| AAATATCAGGCACACCAGGG+AGG | + | chr1_3:57374935-57374954 | None:intergenic | 50.0% | |
| TCCCTGGTGTGCCTGATATT+TGG | - | chr1_3:57374934-57374953 | Msa0127770:five_prime_UTR | 50.0% | |
| GGAACGAAATGCTGAGTGCA+TGG | - | chr1_3:57374955-57374974 | Msa0127770:five_prime_UTR | 50.0% | |
| !! | ATCCAGAGGAAGTGTCCAGT+TGG | - | chr1_3:57373432-57373451 | Msa0127770:three_prime_UTR | 50.0% |
| !! | AGTGTCCAGTTGGCTTGCAT+TGG | - | chr1_3:57373442-57373461 | Msa0127770:three_prime_UTR | 50.0% |
| AGTGGCGAGATAAGGACAGT+TGG | + | chr1_3:57373575-57373594 | None:intergenic | 50.0% | |
| GTTACTGCAGTGGCGAGATA+AGG | + | chr1_3:57373583-57373602 | None:intergenic | 50.0% | |
| !! | GCTCATTGGTGGACTCATTC+TGG | - | chr1_3:57374294-57374313 | Msa0127770:CDS | 50.0% |
| CAATACATGGGCAAAGTGGG+TGG | - | chr1_3:57374505-57374524 | Msa0127770:CDS | 50.0% | |
| TTCAGCCACATGCATGTTCC+AGG | - | chr1_3:57374729-57374748 | Msa0127770:intron | 50.0% | |
| AATGGCTGCAATCAGAGGAC+TGG | + | chr1_3:57374908-57374927 | None:intergenic | 50.0% | |
| AGTCCTCTGATTGCAGCCAT+TGG | - | chr1_3:57374907-57374926 | Msa0127770:five_prime_UTR | 50.0% | |
| AAATATCAGGCACACCAGGG+AGG | + | chr1_3:57374935-57374954 | None:intergenic | 50.0% | |
| TCCCTGGTGTGCCTGATATT+TGG | - | chr1_3:57374934-57374953 | Msa0127770:five_prime_UTR | 50.0% | |
| GGAACGAAATGCTGAGTGCA+TGG | - | chr1_3:57374955-57374974 | Msa0127770:five_prime_UTR | 50.0% | |
| AGCCAACTGGACACTTCCTC+TGG | + | chr1_3:57373437-57373456 | None:intergenic | 55.0% | |
| CTGGTCCTGGAACATGCATG+TGG | + | chr1_3:57374737-57374756 | None:intergenic | 55.0% | |
| GCACCAATGGCTGCAATCAG+AGG | + | chr1_3:57374913-57374932 | None:intergenic | 55.0% | |
| AGCCAACTGGACACTTCCTC+TGG | + | chr1_3:57373437-57373456 | None:intergenic | 55.0% | |
| CTGGTCCTGGAACATGCATG+TGG | + | chr1_3:57374737-57374756 | None:intergenic | 55.0% | |
| GCACCAATGGCTGCAATCAG+AGG | + | chr1_3:57374913-57374932 | None:intergenic | 55.0% | |
| ! | TGCAGCCATTGGTGCCTCCC+TGG | - | chr1_3:57374918-57374937 | Msa0127770:five_prime_UTR | 65.0% |
| !! | GCACACCAGGGAGGCACCAA+TGG | + | chr1_3:57374926-57374945 | None:intergenic | 65.0% |
| ! | TGCAGCCATTGGTGCCTCCC+TGG | - | chr1_3:57374918-57374937 | Msa0127770:five_prime_UTR | 65.0% |
| !! | GCACACCAGGGAGGCACCAA+TGG | + | chr1_3:57374926-57374945 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 57373364 | 57375146 | 57373364 | ID=Msa0127770;Name=Msa0127770 |
| chr1_3 | mRNA | 57373364 | 57375146 | 57373364 | ID=Msa0127770-mRNA-1;Parent=Msa0127770;Name=Msa0127770-mRNA-1;_AED=0.07;_eAED=0.07;_QI=342|1|1|1|0.75|0.8|5|163|261 |
| chr1_3 | exon | 57373364 | 57373827 | 57373364 | ID=Msa0127770-mRNA-1:exon:18202;Parent=Msa0127770-mRNA-1 |
| chr1_3 | exon | 57373919 | 57374077 | 57373919 | ID=Msa0127770-mRNA-1:exon:18201;Parent=Msa0127770-mRNA-1 |
| chr1_3 | exon | 57374182 | 57374363 | 57374182 | ID=Msa0127770-mRNA-1:exon:18200;Parent=Msa0127770-mRNA-1 |
| chr1_3 | exon | 57374441 | 57374612 | 57374441 | ID=Msa0127770-mRNA-1:exon:18199;Parent=Msa0127770-mRNA-1 |
| chr1_3 | exon | 57374833 | 57375146 | 57374833 | ID=Msa0127770-mRNA-1:exon:18198;Parent=Msa0127770-mRNA-1 |
| chr1_3 | five_prime_UTR | 57374833 | 57375146 | 57374833 | ID=Msa0127770-mRNA-1:five_prime_utr;Parent=Msa0127770-mRNA-1 |
| chr1_3 | five_prime_UTR | 57374585 | 57374612 | 57374585 | ID=Msa0127770-mRNA-1:five_prime_utr;Parent=Msa0127770-mRNA-1 |
| chr1_3 | CDS | 57374441 | 57374584 | 57374441 | ID=Msa0127770-mRNA-1:cds;Parent=Msa0127770-mRNA-1 |
| chr1_3 | CDS | 57374182 | 57374363 | 57374182 | ID=Msa0127770-mRNA-1:cds;Parent=Msa0127770-mRNA-1 |
| chr1_3 | CDS | 57373919 | 57374077 | 57373919 | ID=Msa0127770-mRNA-1:cds;Parent=Msa0127770-mRNA-1 |
| chr1_3 | CDS | 57373527 | 57373827 | 57373527 | ID=Msa0127770-mRNA-1:cds;Parent=Msa0127770-mRNA-1 |
| chr1_3 | three_prime_UTR | 57373364 | 57373526 | 57373364 | ID=Msa0127770-mRNA-1:three_prime_utr;Parent=Msa0127770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
