Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464510 | XP_013460855.1 | 99.010 | 303 | 3 | 0 | 16 | 318 | 43 | 345 | 0.0 | 623 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464510 | sp|Q9LM13|GPMA1_ARATH | 76.797 | 306 | 70 | 1 | 11 | 316 | 23 | 327 | 1.69e-176 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464510 | A0A072UYQ0 | 99.010 | 303 | 3 | 0 | 16 | 318 | 43 | 345 | 0.0 | 623 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017130 | Msa0464510 | -0.821472 | 3.964780e-53 | -8.615850e-47 |
| Msa0021710 | Msa0464510 | -0.810498 | 1.118590e-50 | -8.615850e-47 |
| Msa0033930 | Msa0464510 | -0.801994 | 6.922179e-49 | -8.615850e-47 |
| Msa0036580 | Msa0464510 | 0.800556 | 1.363466e-48 | -8.615850e-47 |
| Msa0047470 | Msa0464510 | -0.823680 | 1.215926e-53 | -8.615850e-47 |
| Msa0056160 | Msa0464510 | -0.809673 | 1.684243e-50 | -8.615850e-47 |
| Msa0065690 | Msa0464510 | -0.807172 | 5.754969e-50 | -8.615850e-47 |
| Msa0089080 | Msa0464510 | 0.814492 | 1.498777e-51 | -8.615850e-47 |
| Msa0130800 | Msa0464510 | -0.803212 | 3.882444e-49 | -8.615850e-47 |
| Msa0135890 | Msa0464510 | 0.809382 | 1.944820e-50 | -8.615850e-47 |
| Msa0171920 | Msa0464510 | -0.804912 | 1.719763e-49 | -8.615850e-47 |
| Msa0176620 | Msa0464510 | 0.801202 | 1.006224e-48 | -8.615850e-47 |
| Msa0176710 | Msa0464510 | -0.801987 | 6.946978e-49 | -8.615850e-47 |
| Msa0178940 | Msa0464510 | -0.805575 | 1.249512e-49 | -8.615850e-47 |
| Msa0181020 | Msa0464510 | -0.816200 | 6.251126e-52 | -8.615850e-47 |
| Msa0218860 | Msa0464510 | -0.831518 | 1.595351e-55 | -8.615850e-47 |
| Msa0224370 | Msa0464510 | -0.801651 | 8.144057e-49 | -8.615850e-47 |
| Msa0224400 | Msa0464510 | -0.802367 | 5.801495e-49 | -8.615850e-47 |
| Msa0369430 | Msa0464510 | -0.801275 | 9.721776e-49 | -8.615850e-47 |
| Msa0369780 | Msa0464510 | -0.838338 | 3.051147e-57 | -8.615850e-47 |
| Msa0370500 | Msa0464510 | 0.873997 | 9.528376e-68 | -8.615850e-47 |
| Msa0376480 | Msa0464510 | -0.807181 | 5.730280e-50 | -8.615850e-47 |
| Msa0378670 | Msa0464510 | -0.800870 | 1.176682e-48 | -8.615850e-47 |
| Msa0378700 | Msa0464510 | -0.816758 | 4.688810e-52 | -8.615850e-47 |
| Msa0417150 | Msa0464510 | -0.814389 | 1.579703e-51 | -8.615850e-47 |
| Msa0417990 | Msa0464510 | 0.876503 | 1.326025e-68 | -8.615850e-47 |
| Msa0420800 | Msa0464510 | -0.810574 | 1.077451e-50 | -8.615850e-47 |
| Msa0423600 | Msa0464510 | -0.800983 | 1.115686e-48 | -8.615850e-47 |
| Msa0448120 | Msa0464510 | -0.810401 | 1.173770e-50 | -8.615850e-47 |
| Msa0463150 | Msa0464510 | -0.801729 | 7.846418e-49 | -8.615850e-47 |
| Msa0463540 | Msa0464510 | -0.839612 | 1.427905e-57 | -8.615850e-47 |
| Msa0463990 | Msa0464510 | -0.837759 | 4.299528e-57 | -8.615850e-47 |
| Msa0464510 | Msa0500490 | -0.810641 | 1.042126e-50 | -8.615850e-47 |
| Msa0464510 | Msa0509540 | -0.840855 | 6.761813e-58 | -8.615850e-47 |
| Msa0464510 | Msa0516480 | -0.803034 | 4.227174e-49 | -8.615850e-47 |
| Msa0464510 | Msa0539320 | -0.800324 | 1.520336e-48 | -8.615850e-47 |
| Msa0464510 | Msa0542040 | -0.815104 | 1.096689e-51 | -8.615850e-47 |
| Msa0464510 | Msa0545230 | -0.805491 | 1.301303e-49 | -8.615850e-47 |
| Msa0464510 | Msa0548760 | 0.804540 | 2.056578e-49 | -8.615850e-47 |
| Msa0464510 | Msa0577230 | -0.806050 | 9.929382e-50 | -8.615850e-47 |
| Msa0464510 | Msa0587900 | -0.801331 | 9.468327e-49 | -8.615850e-47 |
| Msa0464510 | Msa0600820 | -0.803492 | 3.397273e-49 | -8.615850e-47 |
| Msa0464510 | Msa0605230 | -0.805463 | 1.318852e-49 | -8.615850e-47 |
| Msa0464510 | Msa0635130 | -0.802889 | 4.529104e-49 | -8.615850e-47 |
| Msa0464510 | Msa0679780 | -0.809648 | 1.705570e-50 | -8.615850e-47 |
| Msa0464510 | Msa0685520 | -0.809588 | 1.757141e-50 | -8.615850e-47 |
| Msa0464510 | Msa0690350 | -0.802009 | 6.876026e-49 | -8.615850e-47 |
| Msa0464510 | Msa0690720 | -0.805365 | 1.382925e-49 | -8.615850e-47 |
| Msa0464510 | Msa0726610 | -0.819462 | 1.147060e-52 | -8.615850e-47 |
| Msa0464510 | Msa0734760 | -0.802727 | 4.891819e-49 | -8.615850e-47 |
| Msa0464510 | Msa0748050 | -0.807976 | 3.884630e-50 | -8.615850e-47 |
| Msa0464510 | Msa0750380 | -0.801030 | 1.091390e-48 | -8.615850e-47 |
| Msa0464510 | Msa0763910 | -0.804389 | 2.211873e-49 | -8.615850e-47 |
| Msa0464510 | Msa0773290 | -0.816774 | 4.650089e-52 | -8.615850e-47 |
| Msa0464510 | Msa0789800 | -0.822963 | 1.787807e-53 | -8.615850e-47 |
| Msa0464510 | Msa0794460 | -0.819524 | 1.110346e-52 | -8.615850e-47 |
| Msa0464510 | Msa0813630 | -0.812040 | 5.178169e-51 | -8.615850e-47 |
| Msa0464510 | Msa0830720 | -0.803075 | 4.145088e-49 | -8.615850e-47 |
| Msa0464510 | Msa0844100 | -0.808701 | 2.721294e-50 | -8.615850e-47 |
| Msa0464510 | Msa0851740 | -0.802679 | 5.002669e-49 | -8.615850e-47 |
| Msa0464510 | Msa0861800 | -0.802043 | 6.765753e-49 | -8.615850e-47 |
| Msa0464510 | Msa0934830 | -0.825522 | 4.476649e-54 | -8.615850e-47 |
| Msa0464510 | Msa0964650 | -0.800080 | 1.704356e-48 | -8.615850e-47 |
| Msa0464510 | Msa0967670 | -0.825642 | 4.193706e-54 | -8.615850e-47 |
| Msa0464510 | Msa0971860 | -0.818957 | 1.494603e-52 | -8.615850e-47 |
| Msa0464510 | Msa1030430 | -0.828861 | 7.103451e-55 | -8.615850e-47 |
| Msa0464510 | Msa1038320 | -0.804041 | 2.612882e-49 | -8.615850e-47 |
| Msa0464510 | Msa1055360 | -0.822292 | 2.561252e-53 | -8.615850e-47 |
| Msa0464510 | Msa1069440 | -0.808656 | 2.782679e-50 | -8.615850e-47 |
| Msa0464510 | Msa1076520 | -0.804990 | 1.656424e-49 | -8.615850e-47 |
| Msa0464510 | Msa1102180 | -0.837243 | 5.830559e-57 | -8.615850e-47 |
| Msa0464510 | Msa1124440 | -0.801484 | 8.810491e-49 | -8.615850e-47 |
| Msa0464510 | Msa1126910 | -0.806637 | 7.469260e-50 | -8.615850e-47 |
| Msa0464510 | Msa1127900 | -0.800045 | 1.732722e-48 | -8.615850e-47 |
| Msa0464510 | Msa1130650 | -0.801023 | 1.094630e-48 | -8.615850e-47 |
| Msa0464510 | Msa1157310 | -0.802035 | 6.791388e-49 | -8.615850e-47 |
| Msa0464510 | Msa1198450 | -0.816845 | 4.482981e-52 | -8.615850e-47 |
| Msa0464510 | Msa1211300 | -0.815166 | 1.062405e-51 | -8.615850e-47 |
| Msa0464510 | Msa1211390 | -0.825075 | 5.711562e-54 | -8.615850e-47 |
| Msa0464510 | Msa1220740 | -0.815541 | 8.767940e-52 | -8.615850e-47 |
| Msa0464510 | Msa1291140 | -0.804895 | 1.734324e-49 | -8.615850e-47 |
| Msa0464510 | Msa1322420 | -0.802129 | 6.496593e-49 | -8.615850e-47 |
| Msa0464510 | Msa1326400 | -0.806787 | 6.941779e-50 | -8.615850e-47 |
| Msa0464510 | Msa1334650 | -0.822560 | 2.218746e-53 | -8.615850e-47 |
| Msa0464510 | Msa1336080 | -0.812073 | 5.093946e-51 | -8.615850e-47 |
| Msa0464510 | Msa1349810 | -0.806647 | 7.430351e-50 | -8.615850e-47 |
| Msa0464510 | Msa1355250 | 0.843342 | 1.485951e-58 | -8.615850e-47 |
| Msa0464510 | Msa1395690 | 0.802472 | 5.520807e-49 | -8.615850e-47 |
| Msa0464510 | Msa1412080 | -0.803403 | 3.545205e-49 | -8.615850e-47 |
| Msa0464510 | Msa1413900 | -0.812546 | 4.015499e-51 | -8.615850e-47 |
| Msa0464510 | Msa1415270 | -0.813943 | 1.981402e-51 | -8.615850e-47 |
| Msa0464510 | Msa1423190 | -0.804622 | 1.977887e-49 | -8.615850e-47 |
| Msa0464510 | Msa1435470 | -0.806109 | 9.648629e-50 | -8.615850e-47 |
| Msa0464510 | Msa1440180 | -0.825238 | 5.227829e-54 | -8.615850e-47 |
| Msa0464510 | Msa1449740 | -0.825879 | 3.684860e-54 | -8.615850e-47 |
| Msa0464510 | Msa1458920 | -0.810957 | 8.902718e-51 | -8.615850e-47 |
| Msa0464510 | Msa1466350 | -0.825945 | 3.553850e-54 | -8.615850e-47 |
| Msa0280140 | Msa0464510 | -0.802000 | 6.905695e-49 | -8.615850e-47 |
| Msa0330370 | Msa0464510 | -0.801403 | 9.155857e-49 | -8.615850e-47 |
| Msa0333900 | Msa0464510 | -0.805087 | 1.581247e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464510 | MtrunA17_Chr3g0115581 | 99.010 | 303 | 3 | 0 | 16 | 318 | 43 | 345 | 0.0 | 623 |
| Msa0464510 | MtrunA17_Chr8g0382611 | 79.842 | 253 | 51 | 0 | 65 | 317 | 66 | 318 | 8.51e-157 | 441 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464510 | AT1G22170.2 | 76.797 | 306 | 70 | 1 | 11 | 316 | 23 | 327 | 1.72e-177 | 494 |
| Msa0464510 | AT1G22170.1 | 76.797 | 306 | 70 | 1 | 11 | 316 | 23 | 327 | 1.72e-177 | 494 |
| Msa0464510 | AT1G78050.1 | 79.715 | 281 | 54 | 1 | 38 | 315 | 47 | 327 | 6.57e-172 | 480 |
Find 86 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTAAAGCTAGGTTATTT+TGG | 0.158631 | 3_3:-64558930 | Msa0464510:three_prime_UTR |
| ATTTATCATACTTGATTTCT+TGG | 0.211753 | 3_3:+64561644 | None:intergenic |
| ACGACTCACCGTGTCGAATA+AGG | 0.265042 | 3_3:+64561438 | None:intergenic |
| CTACCTTCTTACGGCGGTGC+TGG | 0.280926 | 3_3:+64561249 | None:intergenic |
| ACCTACTTGGTCTCTGAAAT+AGG | 0.318239 | 3_3:+64560607 | None:intergenic |
| CAAGAAACAGCAGACAGATA+TGG | 0.338348 | 3_3:-64560719 | Msa0464510:CDS |
| GTATGACAGTATTTCCAAAT+TGG | 0.353070 | 3_3:+64558743 | None:intergenic |
| TCAAAGAAGGAAGATTCATT+AGG | 0.358232 | 3_3:-64560059 | Msa0464510:CDS |
| TTGCAATCTCATTCTCATCT+TGG | 0.370490 | 3_3:-64561873 | Msa0464510:intron |
| ATTGAACCCCAACTTCTATC+TGG | 0.372989 | 3_3:-64560291 | Msa0464510:CDS |
| GAAGTATGTCACCATGCTAT+TGG | 0.383236 | 3_3:-64561900 | None:intergenic |
| GATGTAAATATGAGATCAAC+TGG | 0.389772 | 3_3:+64561314 | None:intergenic |
| TAAAATGCATACCTTGGTAT+AGG | 0.393283 | 3_3:+64559996 | None:intergenic |
| TACAGCGTTTGGCTCTTTAC+AGG | 0.396467 | 3_3:-64559183 | Msa0464510:intron |
| AACCAAAATAACCTAGCTTT+AGG | 0.399557 | 3_3:+64558928 | None:intergenic |
| TCCTCCCAATGGTGAAAGTC+TGG | 0.399875 | 3_3:-64560654 | Msa0464510:CDS |
| CATTCTTTCCAGATAGAAGT+TGG | 0.400888 | 3_3:+64560283 | None:intergenic |
| TTTGTCGAGATACATGATAA+TGG | 0.419771 | 3_3:+64560227 | None:intergenic |
| TGATTTCTTGGAAGTGTCAT+TGG | 0.426824 | 3_3:+64561656 | None:intergenic |
| CCCATAAAACCAACTGAAGC+TGG | 0.429711 | 3_3:-64560027 | Msa0464510:CDS |
| ATTCTTTCCAGATAGAAGTT+GGG | 0.435809 | 3_3:+64560284 | None:intergenic |
| CAACAACTGACGTCTGTGAA+TGG | 0.445999 | 3_3:+64561709 | None:intergenic |
| AGTTGCCAAGCTGCTATGAC+TGG | 0.450681 | 3_3:+64560884 | None:intergenic |
| ATTAGTTTAGAACTGTCAAC+TGG | 0.450749 | 3_3:-64560102 | Msa0464510:CDS |
| TTTCAGGTATGGAGAACTAC+AGG | 0.452952 | 3_3:-64560753 | Msa0464510:intron |
| CTCTCGTTGTGCATAACAAT+AGG | 0.456310 | 3_3:+64560965 | None:intergenic |
| AAGAAACAGCAGACAGATAT+GGG | 0.456650 | 3_3:-64560718 | Msa0464510:CDS |
| TGCAGTAATGGCTTGTCAAA+GGG | 0.459448 | 3_3:-64561786 | Msa0464510:intron |
| TCATTCTCGCTACCTTCTTA+CGG | 0.461824 | 3_3:+64561240 | None:intergenic |
| CTTACGGCGGTGCTGGGTCA+TGG | 0.466672 | 3_3:+64561256 | None:intergenic |
| TACCTTCTTACGGCGGTGCT+GGG | 0.479212 | 3_3:+64561250 | None:intergenic |
| TCTTTGAAAATGTAAAGCAT+TGG | 0.479538 | 3_3:+64560075 | None:intergenic |
| GGCTCTTTACAGGCAGAAGT+TGG | 0.481694 | 3_3:-64559173 | Msa0464510:CDS |
| AACAACTGACGTCTGTGAAT+GGG | 0.484469 | 3_3:+64561710 | None:intergenic |
| ATTTCCAGACTTTCACCATT+GGG | 0.485719 | 3_3:+64560650 | None:intergenic |
| CATAGCTTCGGCGCCACTCA+TGG | 0.486599 | 3_3:+64560684 | None:intergenic |
| ATAGATGAGGCAATTGAAGC+TGG | 0.487774 | 3_3:-64561356 | Msa0464510:CDS |
| AAGGGAATAAGTAGCCGCTT+TGG | 0.491574 | 3_3:-64561768 | Msa0464510:CDS |
| TTCGACACGGTGAGTCGTTG+TGG | 0.492540 | 3_3:-64561433 | Msa0464510:CDS |
| CATTTCCAGACTTTCACCAT+TGG | 0.497995 | 3_3:+64560649 | None:intergenic |
| ACAGACGTCAGTTGTTGATC+CGG | 0.498795 | 3_3:-64561703 | Msa0464510:CDS |
| TCTGTGAAGCTTCTGATCAA+TGG | 0.499485 | 3_3:+64559018 | None:intergenic |
| TTGTTCTCAGTATTACTGCT+AGG | 0.504027 | 3_3:-64558977 | Msa0464510:three_prime_UTR |
| AATGAGAAGAATTTGTTCAC+AGG | 0.510239 | 3_3:-64561410 | Msa0464510:CDS |
| CTGCAGTAATGGCTTGTCAA+AGG | 0.514800 | 3_3:-64561787 | Msa0464510:intron |
| TTCTTTCCAGATAGAAGTTG+GGG | 0.521049 | 3_3:+64560285 | None:intergenic |
| AAGAAGGAAGATTCATTAGG+AGG | 0.521386 | 3_3:-64560056 | Msa0464510:CDS |
| AAGGAAGATTCATTAGGAGG+GGG | 0.527349 | 3_3:-64560053 | Msa0464510:CDS |
| GTGCTGGGTCATGGCAAGCA+TGG | 0.530804 | 3_3:+64561265 | None:intergenic |
| GAATTACAATACAATTCCTC+TGG | 0.533183 | 3_3:+64561745 | None:intergenic |
| GAGGAGGTATGTCATAGCTT+CGG | 0.535709 | 3_3:+64560672 | None:intergenic |
| GACCCAGCACCGCCGTAAGA+AGG | 0.536334 | 3_3:-64561252 | Msa0464510:intron |
| TACTGTAATACTTTCAGTTG+AGG | 0.540444 | 3_3:-64558787 | Msa0464510:three_prime_UTR |
| TTAGCACATATCCTAAAGCT+AGG | 0.540861 | 3_3:-64558939 | Msa0464510:three_prime_UTR |
| TCTATACCCTTCTTGCTAAG+TGG | 0.548267 | 3_3:+64561374 | None:intergenic |
| AGAAGGAAGATTCATTAGGA+GGG | 0.551932 | 3_3:-64560055 | Msa0464510:CDS |
| AGACTTTCACCATTGGGAGG+AGG | 0.552095 | 3_3:+64560656 | None:intergenic |
| AAGCTTCACAGATGAGTCAC+TGG | 0.556436 | 3_3:-64559007 | Msa0464510:three_prime_UTR |
| TCTCGACAAATTAACTTCCC+AGG | 0.565688 | 3_3:-64560214 | Msa0464510:CDS |
| GCATAAACTCCAGCTTCAGT+TGG | 0.565994 | 3_3:+64560018 | None:intergenic |
| GAAGGAAGATTCATTAGGAG+GGG | 0.570970 | 3_3:-64560054 | Msa0464510:CDS |
| TGTTCATGAACTTCAAAATG+TGG | 0.585106 | 3_3:-64558815 | Msa0464510:three_prime_UTR |
| TGATGTACCACTTAGCAAGA+AGG | 0.585970 | 3_3:-64561381 | Msa0464510:CDS |
| GAATAGCCCAATCACCTCCT+GGG | 0.586449 | 3_3:+64560197 | None:intergenic |
| CCATTCCAGTCATAGCAGCT+TGG | 0.588646 | 3_3:-64560889 | Msa0464510:CDS |
| AGAGTGAACAAGCAAAGGCA+TGG | 0.594259 | 3_3:-64560946 | Msa0464510:CDS |
| TAAGTAGCCGCTTTGGCCAG+AGG | 0.595270 | 3_3:-64561761 | Msa0464510:CDS |
| GATGTACCACTTAGCAAGAA+GGG | 0.602199 | 3_3:-64561380 | Msa0464510:CDS |
| TCCAGACTTTCACCATTGGG+AGG | 0.603226 | 3_3:+64560653 | None:intergenic |
| CCAAGCTGCTATGACTGGAA+TGG | 0.606063 | 3_3:+64560889 | None:intergenic |
| CAACGAGAGTGAACAAGCAA+AGG | 0.606715 | 3_3:-64560951 | Msa0464510:CDS |
| TTCACAGATGAGTCACTGGT+GGG | 0.618785 | 3_3:-64559003 | Msa0464510:three_prime_UTR |
| TACAATTCCTCTGGCCAAAG+CGG | 0.621755 | 3_3:+64561754 | None:intergenic |
| CTTCACAGATGAGTCACTGG+TGG | 0.623297 | 3_3:-64559004 | Msa0464510:three_prime_UTR |
| ATGTTATGATTGCCGCACAC+GGG | 0.631044 | 3_3:-64560263 | Msa0464510:CDS |
| GGAAAGAACAAGTCCATGAG+TGG | 0.633002 | 3_3:-64560697 | Msa0464510:CDS |
| AATGTTATGATTGCCGCACA+CGG | 0.634751 | 3_3:-64560264 | Msa0464510:CDS |
| TAGCAAGAAGGGTATAGATG+AGG | 0.640367 | 3_3:-64561369 | Msa0464510:CDS |
| TCTCAATGAATTCCCGTGTG+CGG | 0.651372 | 3_3:+64560251 | None:intergenic |
| TATGACATACCTCCTCCCAA+TGG | 0.657183 | 3_3:-64560665 | Msa0464510:CDS |
| TTCAGGTATGGAGAACTACA+GGG | 0.659499 | 3_3:-64560752 | Msa0464510:intron |
| GCTTTGATCCTTATTCGACA+CGG | 0.660091 | 3_3:-64561446 | Msa0464510:CDS |
| ATTGCAAAGAGCCAATAGCA+TGG | 0.664561 | 3_3:+64561889 | None:intergenic |
| TTCTCGCTACCTTCTTACGG+CGG | 0.686843 | 3_3:+64561243 | None:intergenic |
| TGGAGTTTATGCCTATACCA+AGG | 0.695146 | 3_3:-64560007 | Msa0464510:intron |
| CGACAAATTAACTTCCCAGG+AGG | 0.718042 | 3_3:-64560211 | Msa0464510:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATTAATATAAATCTTAA+AGG | + | chr3_3:64560930-64560949 | None:intergenic | 10.0% |
| !! | AAAAAATGTGAACTTATAAT+AGG | - | chr3_3:64560040-64560059 | Msa0464510:CDS | 15.0% |
| !! | CTAAAAAAATCATCTTAAAT+GGG | + | chr3_3:64560645-64560664 | None:intergenic | 15.0% |
| !!! | AGAAAGTTTTGATTTAAAAA+TGG | - | chr3_3:64560672-64560691 | Msa0464510:CDS | 15.0% |
| !!! | TTCTAAAAATAATATGGTTT+AGG | - | chr3_3:64561454-64561473 | Msa0464510:CDS | 15.0% |
| !! | ATTTATCATACTTGATTTCT+TGG | + | chr3_3:64558955-64558974 | None:intergenic | 20.0% |
| !! | TTAGAGAATATTAGTAAGTA+TGG | - | chr3_3:64559450-64559469 | Msa0464510:intron | 20.0% |
| !!! | TATAACAAAGACTAATTTTC+TGG | + | chr3_3:64559545-64559564 | None:intergenic | 20.0% |
| !! | TTCATAATTATTATCCTTTC+AGG | - | chr3_3:64559827-64559846 | Msa0464510:intron | 20.0% |
| !!! | TATACATATTGTAACTTGTA+AGG | - | chr3_3:64560206-64560225 | Msa0464510:intron | 20.0% |
| !! | CCTAAAAAAATCATCTTAAA+TGG | + | chr3_3:64560646-64560665 | None:intergenic | 20.0% |
| !!! | CCATTTAAGATGATTTTTTT+AGG | - | chr3_3:64560643-64560662 | Msa0464510:CDS | 20.0% |
| !!! | GAGATGTTCTAAAAATAATA+TGG | - | chr3_3:64561448-64561467 | Msa0464510:CDS | 20.0% |
| !!! | ATATGCTATATTTTGATTCT+AGG | - | chr3_3:64561522-64561541 | Msa0464510:intron | 20.0% |
| !!! | TATGCTATATTTTGATTCTA+GGG | - | chr3_3:64561523-64561542 | Msa0464510:intron | 20.0% |
| ! | AGTTGAAATTGTCATATGAT+TGG | - | chr3_3:64559080-64559099 | Msa0464510:intron | 25.0% |
| ! | AGGAGAAGTTTCAAAAATTA+AGG | + | chr3_3:64559769-64559788 | None:intergenic | 25.0% |
| !! | AATTATTATCCTTTCAGGTA+TGG | - | chr3_3:64559832-64559851 | Msa0464510:intron | 25.0% |
| !!! | TCATAGTTAAGTGTTTTTTG+AGG | - | chr3_3:64560108-64560127 | Msa0464510:CDS | 25.0% |
| ! | ATTCATTTACTACATTTGTC+TGG | + | chr3_3:64560158-64560177 | None:intergenic | 25.0% |
| !!! | AACTTGTAAGGTCAATTTTT+TGG | - | chr3_3:64560218-64560237 | Msa0464510:CDS | 25.0% |
| ! | TAAACTAATAACCTGTCAAA+AGG | + | chr3_3:64560483-64560502 | None:intergenic | 25.0% |
| !! | TCTTTGAAAATGTAAAGCAT+TGG | + | chr3_3:64560524-64560543 | None:intergenic | 25.0% |
| !! | ATGCTTTACATTTTCAAAGA+AGG | - | chr3_3:64560524-64560543 | Msa0464510:intron | 25.0% |
| ! | AAAAATCATCTTAAATGGGA+CGG | + | chr3_3:64560641-64560660 | None:intergenic | 25.0% |
| ! | AAAAATGGATATTGTTTGTC+CGG | - | chr3_3:64560687-64560706 | Msa0464510:CDS | 25.0% |
| !! | TCTATGTTTTATATTGCTAG+TGG | + | chr3_3:64560736-64560755 | None:intergenic | 25.0% |
| ! | TTGAATTTCATTCATGATTG+AGG | - | chr3_3:64560946-64560965 | Msa0464510:CDS | 25.0% |
| ! | AATTCTACCAGAAAGAAAAA+GGG | + | chr3_3:64561047-64561066 | None:intergenic | 25.0% |
| ! | ATTAGGACTAGATTTATCTA+AGG | + | chr3_3:64561085-64561104 | None:intergenic | 25.0% |
| ! | AGGTATTACAACTTTCTATT+AGG | + | chr3_3:64561102-64561121 | None:intergenic | 25.0% |
| !!! | ATTTTGATCGAGAAAATCAA+CGG | + | chr3_3:64561129-64561148 | None:intergenic | 25.0% |
| ! | TAATATGGTTTAGGTAAACA+CGG | - | chr3_3:64561463-64561482 | Msa0464510:intron | 25.0% |
| ! | CATATTAATAGAGAACGAAA+AGG | + | chr3_3:64561507-64561526 | None:intergenic | 25.0% |
| !!! | ATAGTTTTGAACATGTGTAA+TGG | - | chr3_3:64561699-64561718 | Msa0464510:CDS | 25.0% |
| ! | AGATAAATGTCCTAAAAAGT+TGG | + | chr3_3:64561736-64561755 | None:intergenic | 25.0% |
| ! | AAGGATTTTATCTGCAGTAA+TGG | - | chr3_3:64558798-64558817 | Msa0464510:three_prime_UTR | 30.0% |
| GAATTACAATACAATTCCTC+TGG | + | chr3_3:64558854-64558873 | None:intergenic | 30.0% | |
| GCAACCAACAAAAATATACT+CGG | + | chr3_3:64559014-64559033 | None:intergenic | 30.0% | |
| ! | AATGAGAAGAATTTGTTCAC+AGG | - | chr3_3:64559186-64559205 | Msa0464510:intron | 30.0% |
| GATGTAAATATGAGATCAAC+TGG | + | chr3_3:64559285-64559304 | None:intergenic | 30.0% | |
| AAACAAAATTTCCACCTACT+TGG | + | chr3_3:64560005-64560024 | None:intergenic | 30.0% | |
| TTAACTATGAAGTTCAACCA+GGG | + | chr3_3:64560098-64560117 | None:intergenic | 30.0% | |
| !!! | GTAAGGTCAATTTTTTGGTA+TGG | - | chr3_3:64560223-64560242 | Msa0464510:CDS | 30.0% |
| TGGTTGAAGTTATCTTCATA+CGG | - | chr3_3:64560243-64560262 | Msa0464510:CDS | 30.0% | |
| ATCTGCAATATTGGTATCAA+TGG | + | chr3_3:64560287-64560306 | None:intergenic | 30.0% | |
| ATTCTTTCCAGATAGAAGTT+GGG | + | chr3_3:64560315-64560334 | None:intergenic | 30.0% | |
| TTTGTCGAGATACATGATAA+TGG | + | chr3_3:64560372-64560391 | None:intergenic | 30.0% | |
| ! | ATTAGTTTAGAACTGTCAAC+TGG | - | chr3_3:64560494-64560513 | Msa0464510:intron | 30.0% |
| TCAAAGAAGGAAGATTCATT+AGG | - | chr3_3:64560537-64560556 | Msa0464510:intron | 30.0% | |
| TAAAATGCATACCTTGGTAT+AGG | + | chr3_3:64560603-64560622 | None:intergenic | 30.0% | |
| TTAAATGGGACGGAATATAA+AGG | + | chr3_3:64560631-64560650 | None:intergenic | 30.0% | |
| !! | CATAGAACATCAAAAGTGTT+TGG | - | chr3_3:64560750-64560769 | Msa0464510:CDS | 30.0% |
| ACTTCTTGTAATCAAGTACT+AGG | - | chr3_3:64560868-64560887 | Msa0464510:intron | 30.0% | |
| TAAGCAAACATGTCAAACTA+AGG | + | chr3_3:64561002-64561021 | None:intergenic | 30.0% | |
| ! | TTCTTATCCCTTTTTCTTTC+TGG | - | chr3_3:64561037-64561056 | Msa0464510:intron | 30.0% |
| CAATTCTACCAGAAAGAAAA+AGG | + | chr3_3:64561048-64561067 | None:intergenic | 30.0% | |
| ! | TTTTGATCGAGAAAATCAAC+GGG | + | chr3_3:64561128-64561147 | None:intergenic | 30.0% |
| CTCGATCAAAATATTTCTCT+TGG | - | chr3_3:64561137-64561156 | Msa0464510:intron | 30.0% | |
| !!! | AATGACTGACACTTATTTTG+AGG | + | chr3_3:64561233-64561252 | None:intergenic | 30.0% |
| AATATGGTTTAGGTAAACAC+GGG | - | chr3_3:64561464-64561483 | Msa0464510:intron | 30.0% | |
| ! | ATCCTAAAGCTAGGTTATTT+TGG | - | chr3_3:64561666-64561685 | Msa0464510:CDS | 30.0% |
| ! | AACCAAAATAACCTAGCTTT+AGG | + | chr3_3:64561671-64561690 | None:intergenic | 30.0% |
| !!! | TTTTGAAGTTCATGAACAAC+AGG | + | chr3_3:64561779-64561798 | None:intergenic | 30.0% |
| TGTTCATGAACTTCAAAATG+TGG | - | chr3_3:64561781-64561800 | Msa0464510:CDS | 30.0% | |
| TACTGTAATACTTTCAGTTG+AGG | - | chr3_3:64561809-64561828 | Msa0464510:intron | 30.0% | |
| GTATGACAGTATTTCCAAAT+TGG | + | chr3_3:64561856-64561875 | None:intergenic | 30.0% | |
| TTGCAATCTCATTCTCATCT+TGG | - | chr3_3:64558723-64558742 | Msa0464510:three_prime_UTR | 35.0% | |
| CATCACCAAAATATCAGAAG+CGG | - | chr3_3:64558756-64558775 | Msa0464510:three_prime_UTR | 35.0% | |
| ! | ATACACCGCTTCTGATATTT+TGG | + | chr3_3:64558764-64558783 | None:intergenic | 35.0% |
| ATATCAGAAGCGGTGTATTA+AGG | - | chr3_3:64558766-64558785 | Msa0464510:three_prime_UTR | 35.0% | |
| !!! | ATTGGTGTTGCTTTTTGAAG+GGG | + | chr3_3:64558925-64558944 | None:intergenic | 35.0% |
| !!! | CATTGGTGTTGCTTTTTGAA+GGG | + | chr3_3:64558926-64558945 | None:intergenic | 35.0% |
| !!! | TCATTGGTGTTGCTTTTTGA+AGG | + | chr3_3:64558927-64558946 | None:intergenic | 35.0% |
| !! | TGATTTCTTGGAAGTGTCAT+TGG | + | chr3_3:64558943-64558962 | None:intergenic | 35.0% |
| !! | TGTGCCGAGTATATTTTTGT+TGG | - | chr3_3:64559007-64559026 | Msa0464510:three_prime_UTR | 35.0% |
| AAGAAACAGCAGACAGATAT+GGG | - | chr3_3:64559878-64559897 | Msa0464510:intron | 35.0% | |
| ATTTCCAGACTTTCACCATT+GGG | + | chr3_3:64559949-64559968 | None:intergenic | 35.0% | |
| CTTAACTATGAAGTTCAACC+AGG | + | chr3_3:64560099-64560118 | None:intergenic | 35.0% | |
| TTCTTTCCAGATAGAAGTTG+GGG | + | chr3_3:64560314-64560333 | None:intergenic | 35.0% | |
| CATTCTTTCCAGATAGAAGT+TGG | + | chr3_3:64560316-64560335 | None:intergenic | 35.0% | |
| ACTAATAACCTGTCAAAAGG+CGG | + | chr3_3:64560480-64560499 | None:intergenic | 35.0% | |
| AAGAAGGAAGATTCATTAGG+AGG | - | chr3_3:64560540-64560559 | Msa0464510:intron | 35.0% | |
| AGAAGGAAGATTCATTAGGA+GGG | - | chr3_3:64560541-64560560 | Msa0464510:intron | 35.0% | |
| GTCGTATAAAATGCATACCT+TGG | + | chr3_3:64560609-64560628 | None:intergenic | 35.0% | |
| ! | TTCTTTCTGGTAGAATTGCA+AGG | - | chr3_3:64561050-64561069 | Msa0464510:intron | 35.0% |
| !! | TGGCTTTCTAAGATGTTAGT+TGG | - | chr3_3:64561157-64561176 | Msa0464510:intron | 35.0% |
| AACCAAGTAAAGTCGTTAGT+GGG | + | chr3_3:64561394-64561413 | None:intergenic | 35.0% | |
| TAACCAAGTAAAGTCGTTAG+TGG | + | chr3_3:64561395-64561414 | None:intergenic | 35.0% | |
| TTGTTCTCAGTATTACTGCT+AGG | - | chr3_3:64561619-64561638 | Msa0464510:intron | 35.0% | |
| TTAGCACATATCCTAAAGCT+AGG | - | chr3_3:64561657-64561676 | Msa0464510:CDS | 35.0% | |
| GTAAAAAACGAGTGCCAATT+TGG | - | chr3_3:64561839-64561858 | Msa0464510:intron | 35.0% | |
| ATTGCAAAGAGCCAATAGCA+TGG | + | chr3_3:64558710-64558729 | None:intergenic | 40.0% | |
| TGTATTAAGGTTGGCGACAA+AGG | - | chr3_3:64558779-64558798 | Msa0464510:three_prime_UTR | 40.0% | |
| ! | TGCAGTAATGGCTTGTCAAA+GGG | - | chr3_3:64558810-64558829 | Msa0464510:three_prime_UTR | 40.0% |
| AACAACTGACGTCTGTGAAT+GGG | + | chr3_3:64558889-64558908 | None:intergenic | 40.0% | |
| ! | TGTTGGTTGCTTCTTGAAGT+TGG | - | chr3_3:64559024-64559043 | Msa0464510:three_prime_UTR | 40.0% |
| AAGTTGGATCATCGAGTGTT+AGG | - | chr3_3:64559040-64559059 | Msa0464510:intron | 40.0% | |
| GCTTTGATCCTTATTCGACA+CGG | - | chr3_3:64559150-64559169 | Msa0464510:exon | 40.0% | |
| TGATGTACCACTTAGCAAGA+AGG | - | chr3_3:64559215-64559234 | Msa0464510:intron | 40.0% | |
| GATGTACCACTTAGCAAGAA+GGG | - | chr3_3:64559216-64559235 | Msa0464510:intron | 40.0% | |
| TCTATACCCTTCTTGCTAAG+TGG | + | chr3_3:64559225-64559244 | None:intergenic | 40.0% | |
| ! | TAGCAAGAAGGGTATAGATG+AGG | - | chr3_3:64559227-64559246 | Msa0464510:intron | 40.0% |
| ATAGATGAGGCAATTGAAGC+TGG | - | chr3_3:64559240-64559259 | Msa0464510:intron | 40.0% | |
| TCATTCTCGCTACCTTCTTA+CGG | + | chr3_3:64559359-64559378 | None:intergenic | 40.0% | |
| !! | TTAACCATTAACTTGCCTGC+AGG | - | chr3_3:64559606-64559625 | Msa0464510:intron | 40.0% |
| CTCTCGTTGTGCATAACAAT+AGG | + | chr3_3:64559634-64559653 | None:intergenic | 40.0% | |
| TGCTATTCAGCACGTTGTAA+AGG | + | chr3_3:64559789-64559808 | None:intergenic | 40.0% | |
| TTACAACGTGCTGAATAGCA+CGG | - | chr3_3:64559789-64559808 | Msa0464510:intron | 40.0% | |
| TGTAGTTCTCCATACCTGAA+AGG | + | chr3_3:64559844-64559863 | None:intergenic | 40.0% | |
| ! | TTTCAGGTATGGAGAACTAC+AGG | - | chr3_3:64559843-64559862 | Msa0464510:intron | 40.0% |
| TTCAGGTATGGAGAACTACA+GGG | - | chr3_3:64559844-64559863 | Msa0464510:intron | 40.0% | |
| CAAGAAACAGCAGACAGATA+TGG | - | chr3_3:64559877-64559896 | Msa0464510:intron | 40.0% | |
| CATTTCCAGACTTTCACCAT+TGG | + | chr3_3:64559950-64559969 | None:intergenic | 40.0% | |
| !! | ACCTACTTGGTCTCTGAAAT+AGG | + | chr3_3:64559992-64560011 | None:intergenic | 40.0% |
| TATTTCAGAGACCAAGTAGG+TGG | - | chr3_3:64559991-64560010 | Msa0464510:intron | 40.0% | |
| AAGTTCAACCAGGGAAAATG+GGG | + | chr3_3:64560089-64560108 | None:intergenic | 40.0% | |
| GAAGTTCAACCAGGGAAAAT+GGG | + | chr3_3:64560090-64560109 | None:intergenic | 40.0% | |
| TGAAGTTCAACCAGGGAAAA+TGG | + | chr3_3:64560091-64560110 | None:intergenic | 40.0% | |
| TGGGGTTCAATCTGCAATAT+TGG | + | chr3_3:64560296-64560315 | None:intergenic | 40.0% | |
| ATTGAACCCCAACTTCTATC+TGG | - | chr3_3:64560305-64560324 | Msa0464510:intron | 40.0% | |
| AATGTTATGATTGCCGCACA+CGG | - | chr3_3:64560332-64560351 | Msa0464510:intron | 40.0% | |
| TCTCGACAAATTAACTTCCC+AGG | - | chr3_3:64560382-64560401 | Msa0464510:intron | 40.0% | |
| TAATAACCTGTCAAAAGGCG+GGG | + | chr3_3:64560478-64560497 | None:intergenic | 40.0% | |
| CTAATAACCTGTCAAAAGGC+GGG | + | chr3_3:64560479-64560498 | None:intergenic | 40.0% | |
| GAAGGAAGATTCATTAGGAG+GGG | - | chr3_3:64560542-64560561 | Msa0464510:intron | 40.0% | |
| AAGGAAGATTCATTAGGAGG+GGG | - | chr3_3:64560543-64560562 | Msa0464510:intron | 40.0% | |
| !!! | CCAGCTTCAGTTGGTTTTAT+GGG | + | chr3_3:64560572-64560591 | None:intergenic | 40.0% |
| !!! | TCCAGCTTCAGTTGGTTTTA+TGG | + | chr3_3:64560573-64560592 | None:intergenic | 40.0% |
| TGGAGTTTATGCCTATACCA+AGG | - | chr3_3:64560589-64560608 | Msa0464510:intron | 40.0% | |
| ATGGATATTGTTTGTCCGGA+AGG | - | chr3_3:64560691-64560710 | Msa0464510:CDS | 40.0% | |
| TGAGAGTCTAGATCGTATGT+TGG | - | chr3_3:64560899-64560918 | Msa0464510:CDS | 40.0% | |
| GTCTAGATCGTATGTTGGAA+AGG | - | chr3_3:64560904-64560923 | Msa0464510:CDS | 40.0% | |
| TAAGTGTCAGTCATTGACGT+CGG | - | chr3_3:64561238-64561257 | Msa0464510:intron | 40.0% | |
| !! | AGACTGCTCTAAAATGATGC+TGG | - | chr3_3:64561315-64561334 | Msa0464510:CDS | 40.0% |
| CTTTACTTGGTTACAGCGTT+TGG | - | chr3_3:64561402-64561421 | Msa0464510:CDS | 40.0% | |
| TCTGTGAAGCTTCTGATCAA+TGG | + | chr3_3:64561581-64561600 | None:intergenic | 40.0% | |
| ! | AGACCAGCTTCCAACTTTTT+AGG | - | chr3_3:64561723-64561742 | Msa0464510:CDS | 40.0% |
| TGTCCTAAAAAGTTGGAAGC+TGG | + | chr3_3:64561729-64561748 | None:intergenic | 40.0% | |
| CAGAAGCGGTGTATTAAGGT+TGG | - | chr3_3:64558770-64558789 | Msa0464510:three_prime_UTR | 45.0% | |
| ! | CTGCAGTAATGGCTTGTCAA+AGG | - | chr3_3:64558809-64558828 | Msa0464510:three_prime_UTR | 45.0% |
| AAGGGAATAAGTAGCCGCTT+TGG | - | chr3_3:64558828-64558847 | Msa0464510:three_prime_UTR | 45.0% | |
| TACAATTCCTCTGGCCAAAG+CGG | + | chr3_3:64558845-64558864 | None:intergenic | 45.0% | |
| CAACAACTGACGTCTGTGAA+TGG | + | chr3_3:64558890-64558909 | None:intergenic | 45.0% | |
| ACAGACGTCAGTTGTTGATC+CGG | - | chr3_3:64558893-64558912 | Msa0464510:three_prime_UTR | 45.0% | |
| !! | CTTTTTGAAGGGGACAACAC+CGG | + | chr3_3:64558915-64558934 | None:intergenic | 45.0% |
| TGGATCATCGAGTGTTAGGT+TGG | - | chr3_3:64559044-64559063 | Msa0464510:intron | 45.0% | |
| CAAAGCTGCTTCATCTGAGT+TGG | + | chr3_3:64559136-64559155 | None:intergenic | 45.0% | |
| CAACGAGAGTGAACAAGCAA+AGG | - | chr3_3:64559645-64559664 | Msa0464510:intron | 45.0% | |
| AGAGTGAACAAGCAAAGGCA+TGG | - | chr3_3:64559650-64559669 | Msa0464510:intron | 45.0% | |
| GGAAAGAACAAGTCCATGAG+TGG | - | chr3_3:64559899-64559918 | Msa0464510:intron | 45.0% | |
| ! | GAGGAGGTATGTCATAGCTT+CGG | + | chr3_3:64559927-64559946 | None:intergenic | 45.0% |
| TATGACATACCTCCTCCCAA+TGG | - | chr3_3:64559931-64559950 | Msa0464510:intron | 45.0% | |
| GCCTATTTCAGAGACCAAGT+AGG | - | chr3_3:64559988-64560007 | Msa0464510:intron | 45.0% | |
| ATGTTATGATTGCCGCACAC+GGG | - | chr3_3:64560333-64560352 | Msa0464510:intron | 45.0% | |
| TCTCAATGAATTCCCGTGTG+CGG | + | chr3_3:64560348-64560367 | None:intergenic | 45.0% | |
| CGACAAATTAACTTCCCAGG+AGG | - | chr3_3:64560385-64560404 | Msa0464510:intron | 45.0% | |
| TTAACTTCCCAGGAGGTGAT+TGG | - | chr3_3:64560392-64560411 | Msa0464510:intron | 45.0% | |
| TAACTTCCCAGGAGGTGATT+GGG | - | chr3_3:64560393-64560412 | Msa0464510:intron | 45.0% | |
| ! | ATTTTTCCCCGCCTTTTGAC+AGG | - | chr3_3:64560469-64560488 | Msa0464510:intron | 45.0% |
| CCCATAAAACCAACTGAAGC+TGG | - | chr3_3:64560569-64560588 | Msa0464510:intron | 45.0% | |
| GCATAAACTCCAGCTTCAGT+TGG | + | chr3_3:64560581-64560600 | None:intergenic | 45.0% | |
| CTTCATGTCGCTATGTGCTA+TGG | - | chr3_3:64560789-64560808 | Msa0464510:intron | 45.0% | |
| TCGAGAAAATCAACGGGTCA+AGG | + | chr3_3:64561122-64561141 | None:intergenic | 45.0% | |
| TGCCCACTAACGACTTTACT+TGG | - | chr3_3:64561389-64561408 | Msa0464510:CDS | 45.0% | |
| !! | TACAGCGTTTGGCTCTTTAC+AGG | - | chr3_3:64561413-64561432 | Msa0464510:CDS | 45.0% |
| ! | TCTAGGGCTGTTTCACTTTC+AGG | - | chr3_3:64561539-64561558 | Msa0464510:intron | 45.0% |
| AAGCTTCACAGATGAGTCAC+TGG | - | chr3_3:64561589-64561608 | Msa0464510:intron | 45.0% | |
| TTCACAGATGAGTCACTGGT+GGG | - | chr3_3:64561593-64561612 | Msa0464510:intron | 45.0% | |
| ACGACTCACCGTGTCGAATA+AGG | + | chr3_3:64559161-64559180 | None:intergenic | 50.0% | |
| TTCTCGCTACCTTCTTACGG+CGG | + | chr3_3:64559356-64559375 | None:intergenic | 50.0% | |
| GCATAACAATAGGCACCTGC+AGG | + | chr3_3:64559624-64559643 | None:intergenic | 50.0% | |
| CCAAGCTGCTATGACTGGAA+TGG | + | chr3_3:64559710-64559729 | None:intergenic | 50.0% | |
| CCATTCCAGTCATAGCAGCT+TGG | - | chr3_3:64559707-64559726 | Msa0464510:intron | 50.0% | |
| AGTTGCCAAGCTGCTATGAC+TGG | + | chr3_3:64559715-64559734 | None:intergenic | 50.0% | |
| AGACTTTCACCATTGGGAGG+AGG | + | chr3_3:64559943-64559962 | None:intergenic | 50.0% | |
| TCCTCCCAATGGTGAAAGTC+TGG | - | chr3_3:64559942-64559961 | Msa0464510:intron | 50.0% | |
| TCCAGACTTTCACCATTGGG+AGG | + | chr3_3:64559946-64559965 | None:intergenic | 50.0% | |
| TTCAACCAGGGAAAATGGGG+TGG | + | chr3_3:64560086-64560105 | None:intergenic | 50.0% | |
| GAATAGCCCAATCACCTCCT+GGG | + | chr3_3:64560402-64560421 | None:intergenic | 50.0% | |
| TGAATAGCCCAATCACCTCC+TGG | + | chr3_3:64560403-64560422 | None:intergenic | 50.0% | |
| GGCTCTTTACAGGCAGAAGT+TGG | - | chr3_3:64561423-64561442 | Msa0464510:CDS | 50.0% | |
| CTTCACAGATGAGTCACTGG+TGG | - | chr3_3:64561592-64561611 | Msa0464510:intron | 50.0% | |
| ! | TAAGTAGCCGCTTTGGCCAG+AGG | - | chr3_3:64558835-64558854 | Msa0464510:three_prime_UTR | 55.0% |
| TTCGACACGGTGAGTCGTTG+TGG | - | chr3_3:64559163-64559182 | Msa0464510:CDS | 55.0% | |
| TACCTTCTTACGGCGGTGCT+GGG | + | chr3_3:64559349-64559368 | None:intergenic | 55.0% | |
| GGCACCTGCAGGCAAGTTAA+TGG | + | chr3_3:64559613-64559632 | None:intergenic | 55.0% | |
| GGGAAAATGGGGTGGAAGTG+CGG | + | chr3_3:64560078-64560097 | None:intergenic | 55.0% | |
| ! | CACTTCCACCCCATTTTCCC+TGG | - | chr3_3:64560078-64560097 | Msa0464510:CDS | 55.0% |
| GTTTGTCCGGAAGGTTGCAG+TGG | - | chr3_3:64560700-64560719 | Msa0464510:CDS | 55.0% | |
| ! | CAAGTGCCACTGCAACCTTC+CGG | + | chr3_3:64560709-64560728 | None:intergenic | 55.0% |
| GTGCTGGGTCATGGCAAGCA+TGG | + | chr3_3:64559334-64559353 | None:intergenic | 60.0% | |
| CTACCTTCTTACGGCGGTGC+TGG | + | chr3_3:64559350-64559369 | None:intergenic | 60.0% | |
| CATAGCTTCGGCGCCACTCA+TGG | + | chr3_3:64559915-64559934 | None:intergenic | 60.0% | |
| ! | CTTACGGCGGTGCTGGGTCA+TGG | + | chr3_3:64559343-64559362 | None:intergenic | 65.0% |
| GACCCAGCACCGCCGTAAGA+AGG | - | chr3_3:64559344-64559363 | Msa0464510:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 64558701 | 64561917 | 64558701 | ID=Msa0464510;Name=Msa0464510 |
| chr3_3 | mRNA | 64558701 | 64561917 | 64558701 | ID=Msa0464510-mRNA-1;Parent=Msa0464510;Name=Msa0464510-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.87|0.77|1|0.87|0.77|9|373|318 |
| chr3_3 | exon | 64558701 | 64559057 | 64558701 | ID=Msa0464510-mRNA-1:exon:14218;Parent=Msa0464510-mRNA-1 |
| chr3_3 | exon | 64559143 | 64559200 | 64559143 | ID=Msa0464510-mRNA-1:exon:14217;Parent=Msa0464510-mRNA-1 |
| chr3_3 | exon | 64560008 | 64560127 | 64560008 | ID=Msa0464510-mRNA-1:exon:14216;Parent=Msa0464510-mRNA-1 |
| chr3_3 | exon | 64560212 | 64560313 | 64560212 | ID=Msa0464510-mRNA-1:exon:14215;Parent=Msa0464510-mRNA-1 |
| chr3_3 | exon | 64560613 | 64560769 | 64560613 | ID=Msa0464510-mRNA-1:exon:14214;Parent=Msa0464510-mRNA-1 |
| chr3_3 | exon | 64560872 | 64560990 | 64560872 | ID=Msa0464510-mRNA-1:exon:14213;Parent=Msa0464510-mRNA-1 |
| chr3_3 | exon | 64561253 | 64561476 | 64561253 | ID=Msa0464510-mRNA-1:exon:14212;Parent=Msa0464510-mRNA-1 |
| chr3_3 | exon | 64561655 | 64561803 | 64561655 | ID=Msa0464510-mRNA-1:exon:14211;Parent=Msa0464510-mRNA-1 |
| chr3_3 | exon | 64561874 | 64561917 | 64561874 | ID=Msa0464510-mRNA-1:exon:14210;Parent=Msa0464510-mRNA-1 |
| chr3_3 | CDS | 64561874 | 64561917 | 64561874 | ID=Msa0464510-mRNA-1:cds;Parent=Msa0464510-mRNA-1 |
| chr3_3 | CDS | 64561655 | 64561803 | 64561655 | ID=Msa0464510-mRNA-1:cds;Parent=Msa0464510-mRNA-1 |
| chr3_3 | CDS | 64561253 | 64561476 | 64561253 | ID=Msa0464510-mRNA-1:cds;Parent=Msa0464510-mRNA-1 |
| chr3_3 | CDS | 64560872 | 64560990 | 64560872 | ID=Msa0464510-mRNA-1:cds;Parent=Msa0464510-mRNA-1 |
| chr3_3 | CDS | 64560613 | 64560769 | 64560613 | ID=Msa0464510-mRNA-1:cds;Parent=Msa0464510-mRNA-1 |
| chr3_3 | CDS | 64560212 | 64560313 | 64560212 | ID=Msa0464510-mRNA-1:cds;Parent=Msa0464510-mRNA-1 |
| chr3_3 | CDS | 64560008 | 64560127 | 64560008 | ID=Msa0464510-mRNA-1:cds;Parent=Msa0464510-mRNA-1 |
| chr3_3 | CDS | 64559159 | 64559200 | 64559159 | ID=Msa0464510-mRNA-1:cds;Parent=Msa0464510-mRNA-1 |
| chr3_3 | three_prime_UTR | 64559143 | 64559158 | 64559143 | ID=Msa0464510-mRNA-1:three_prime_utr;Parent=Msa0464510-mRNA-1 |
| chr3_3 | three_prime_UTR | 64558701 | 64559057 | 64558701 | ID=Msa0464510-mRNA-1:three_prime_utr;Parent=Msa0464510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
