AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0690720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690720 MtrunA17_Chr4g0039251 98.413 693 10 1 1 692 41 733 0.0 1404
Msa0690720 MtrunA17_Chr4g0039231 81.202 649 71 2 93 691 1 648 0.0 1071
Msa0690720 MtrunA17_Chr4g0039261 65.702 691 235 2 1 691 1 689 0.0 967
Msa0690720 MtrunA17_Chr6g0477811 58.372 639 263 3 32 670 47 682 0.0 758
Msa0690720 MtrunA17_Chr4g0050261 45.753 671 322 7 29 658 50 719 0.0 597
Msa0690720 MtrunA17_Chr4g0050251 47.656 640 312 6 29 658 50 676 0.0 597
Msa0690720 MtrunA17_Chr4g0050291 45.970 670 332 9 1 658 3 654 0.0 592
Msa0690720 MtrunA17_Chr4g0050221 44.623 623 323 8 25 642 6 611 0.0 539
Msa0690720 MtrunA17_Chr4g0026731 44.113 603 285 9 85 653 12 596 4.18e-172 505
Msa0690720 MtrunA17_Chr4g0050201 42.086 556 296 9 94 642 4 540 2.41e-149 445
Msa0690720 MtrunA17_Chr2g0327241 38.499 613 354 12 29 634 104 700 2.78e-128 396
Msa0690720 MtrunA17_Chr1g0208391 29.646 678 414 16 34 689 75 711 1.14e-78 266
Msa0690720 MtrunA17_Chr1g0176451 30.820 610 374 13 38 635 9 582 2.99e-78 261
Msa0690720 MtrunA17_Chr1g0213091 32.270 533 343 5 49 566 119 648 4.60e-75 256
Msa0690720 MtrunA17_Chr1g0176441 29.843 573 372 12 31 589 148 704 3.11e-71 246
Msa0690720 MtrunA17_Chr1g0200651 34.821 448 270 10 52 492 90 522 3.31e-71 244
Msa0690720 MtrunA17_Chr1g0198931 30.198 606 371 18 49 635 104 676 1.88e-70 242
Msa0690720 MtrunA17_Chr3g0102731 40.179 336 187 5 51 383 97 421 8.42e-70 238
Msa0690720 MtrunA17_Chr5g0408061 30.693 606 367 16 50 635 63 635 1.81e-69 239
Msa0690720 MtrunA17_Chr8g0384391 30.413 605 392 11 45 637 49 636 8.08e-69 237
Msa0690720 MtrunA17_Chr2g0316301 31.190 622 357 18 35 634 55 627 1.47e-68 236
Msa0690720 MtrunA17_Chr7g0263351 30.672 551 348 9 49 585 124 654 4.55e-68 237
Msa0690720 MtrunA17_Chr7g0267971 28.732 623 395 15 31 636 137 727 1.50e-67 236
Msa0690720 MtrunA17_Chr3g0130331 29.064 609 389 14 47 637 53 636 1.54e-64 225
Msa0690720 MtrunA17_Chr5g0446901 39.701 335 184 5 50 377 107 430 2.57e-64 224
Msa0690720 MtrunA17_Chr8g0359931 29.133 611 365 18 46 634 60 624 4.90e-64 224
Msa0690720 MtrunA17_Chr2g0318061 37.330 367 191 9 50 406 29 366 1.06e-63 216
Msa0690720 MtrunA17_Chr1g0202431 29.533 535 335 10 48 578 46 542 6.93e-62 217
Msa0690720 MtrunA17_Chr2g0331081 29.027 565 348 14 51 596 890 1420 7.11e-56 206
Msa0690720 MtrunA17_Chr2g0331081 26.543 648 392 19 44 636 167 785 2.10e-45 175
Msa0690720 MtrunA17_Chr2g0332241 29.433 547 325 16 52 572 856 1367 2.35e-54 202
Msa0690720 MtrunA17_Chr2g0332241 27.768 587 344 22 48 581 159 718 2.45e-44 172
Msa0690720 MtrunA17_Chr2g0332221 29.250 547 326 16 52 572 855 1366 1.29e-53 200
Msa0690720 MtrunA17_Chr2g0332221 27.226 584 351 18 48 581 159 718 9.42e-44 170
Msa0690720 MtrunA17_Chr7g0264441 30.108 465 274 9 46 474 273 722 3.35e-53 197
Msa0690720 MtrunA17_Chr4g0065231 26.263 594 399 12 52 637 75 637 6.65e-53 193
Msa0690720 MtrunA17_Chr4g0003981 28.702 547 329 17 52 572 866 1377 1.31e-52 197
Msa0690720 MtrunA17_Chr4g0003981 25.674 631 399 16 52 636 173 779 2.11e-44 172
Msa0690720 MtrunA17_Chr2g0332211 29.623 557 311 20 52 572 939 1450 1.97e-52 196
Msa0690720 MtrunA17_Chr2g0332211 27.211 588 347 20 48 584 240 797 1.24e-43 169
Msa0690720 MtrunA17_Chr3g0104621 27.769 659 393 20 35 639 35 664 3.00e-52 196
Msa0690720 MtrunA17_Chr3g0104621 26.182 550 343 18 51 573 763 1276 3.23e-44 171
Msa0690720 MtrunA17_Chr7g0262261 29.304 546 335 14 52 573 803 1321 1.50e-51 194
Msa0690720 MtrunA17_Chr7g0262261 26.412 602 374 15 52 612 133 706 1.90e-45 175
Msa0690720 MtrunA17_Chr1g0199471 40.856 257 144 4 32 285 501 752 1.92e-51 193
Msa0690720 MtrunA17_Chr7g0265991 25.196 639 407 15 36 639 42 644 2.28e-51 189
Msa0690720 MtrunA17_Chr4g0003971 28.546 564 330 14 52 583 825 1347 2.75e-51 192
Msa0690720 MtrunA17_Chr4g0003971 25.502 647 403 16 52 649 161 777 3.89e-46 177
Msa0690720 MtrunA17_Chr1g0180971 42.023 257 141 4 32 285 397 648 4.05e-51 190
Msa0690720 MtrunA17_Chr1g0148841 28.417 556 341 14 51 583 876 1397 6.31e-51 192
Msa0690720 MtrunA17_Chr1g0148841 25.183 683 435 18 51 686 165 818 1.35e-41 163
Msa0690720 MtrunA17_Chr8g0393191 42.400 250 140 3 52 299 69 316 6.95e-51 190
Msa0690720 MtrunA17_Chr8g0393191 23.975 317 213 8 346 639 502 813 6.90e-16 82.0
Msa0690720 MtrunA17_Chr8g0340651 27.256 543 334 11 51 567 904 1411 1.80e-50 190
Msa0690720 MtrunA17_Chr8g0340651 25.496 706 432 25 44 688 166 838 1.03e-43 170
Msa0690720 MtrunA17_Chr7g0262251 28.036 560 326 14 52 573 827 1347 2.15e-50 190
Msa0690720 MtrunA17_Chr7g0262251 27.732 613 391 17 52 636 175 763 2.04e-49 187
Msa0690720 MtrunA17_Chr7g0262241 28.022 546 330 13 52 573 880 1386 2.30e-50 190
Msa0690720 MtrunA17_Chr7g0262241 26.299 635 390 21 52 636 162 768 1.29e-46 179
Msa0690720 MtrunA17_Chr7g0262221 28.674 558 322 16 52 573 854 1371 1.48e-48 184
Msa0690720 MtrunA17_Chr7g0262221 24.806 645 399 17 52 636 163 781 7.68e-44 170
Msa0690720 MtrunA17_Chr7g0261971 27.338 556 340 14 52 579 875 1394 2.46e-48 184
Msa0690720 MtrunA17_Chr7g0261971 25.592 633 397 18 52 636 158 764 4.50e-43 168
Msa0690720 MtrunA17_Chr7g0265981 25.490 612 384 13 51 631 882 1452 1.15e-47 182
Msa0690720 MtrunA17_Chr7g0265981 27.304 586 353 18 37 571 165 728 5.76e-41 161
Msa0690720 MtrunA17_Chr1g0171351 26.720 625 373 17 51 639 893 1468 1.83e-47 181
Msa0690720 MtrunA17_Chr1g0171351 25.884 707 417 24 46 687 170 834 3.52e-43 168
Msa0690720 MtrunA17_Chr1g0148811 26.068 679 413 19 3 640 788 1418 5.10e-47 180
Msa0690720 MtrunA17_Chr1g0148811 26.697 663 404 24 48 659 148 779 4.78e-39 155
Msa0690720 MtrunA17_Chr7g0262231 26.852 540 344 11 52 573 883 1389 7.05e-47 179
Msa0690720 MtrunA17_Chr7g0262231 26.341 634 391 19 52 636 162 768 1.53e-45 175
Msa0690720 MtrunA17_Chr5g0411621 42.449 245 127 4 52 289 51 288 1.99e-46 176
Msa0690720 MtrunA17_Chr5g0411621 22.878 271 197 8 372 639 462 723 9.85e-12 68.6
Msa0690720 MtrunA17_Chr7g0261951 27.387 555 322 14 52 573 879 1385 5.79e-46 177
Msa0690720 MtrunA17_Chr7g0261951 25.276 633 399 18 52 636 162 768 7.46e-44 170
Msa0690720 MtrunA17_Chr7g0265961 25.481 675 402 20 44 660 170 801 8.46e-46 176
Msa0690720 MtrunA17_Chr7g0265961 25.532 611 381 13 51 639 830 1388 1.81e-40 160
Msa0690720 MtrunA17_Chr3g0138261 27.656 546 338 14 51 572 869 1381 1.89e-45 175
Msa0690720 MtrunA17_Chr3g0138261 26.316 608 367 18 52 612 166 739 1.66e-42 166
Msa0690720 MtrunA17_Chr0c20g0493841 24.653 649 422 16 52 657 168 792 2.52e-45 174
Msa0690720 MtrunA17_Chr0c20g0493841 24.773 662 408 18 10 630 803 1415 6.18e-45 173
Msa0690720 MtrunA17_Chr4g0028621 40.856 257 144 4 32 285 491 742 1.26e-44 172
Msa0690720 MtrunA17_Chr7g0265971 26.425 579 367 13 37 571 159 722 1.68e-44 172
Msa0690720 MtrunA17_Chr7g0265971 26.212 557 376 12 51 590 874 1412 2.54e-42 166
Msa0690720 MtrunA17_Chr4g0004021 26.073 629 395 16 52 634 171 775 2.11e-44 172
Msa0690720 MtrunA17_Chr4g0004021 28.899 436 268 12 52 473 863 1270 2.32e-42 166
Msa0690720 MtrunA17_Chr4g0062871 27.726 541 340 14 51 573 843 1350 2.10e-43 169
Msa0690720 MtrunA17_Chr4g0062871 25.793 694 431 21 52 691 150 813 2.85e-40 159
Msa0690720 MtrunA17_Chr1g0198291 25.293 597 351 14 51 607 893 1434 4.00e-43 168
Msa0690720 MtrunA17_Chr1g0198291 27.523 654 383 26 40 636 179 798 2.76e-40 159
Msa0690720 MtrunA17_Chr5g0429871 25.775 613 406 13 36 631 650 1230 4.19e-43 167
Msa0690720 MtrunA17_Chr5g0429871 25.660 530 316 18 94 571 20 523 7.67e-33 136
Msa0690720 MtrunA17_Chr7g0261981 25.424 649 405 19 52 651 162 780 9.10e-43 167
Msa0690720 MtrunA17_Chr7g0261981 26.364 550 308 18 52 573 861 1341 6.37e-40 158
Msa0690720 MtrunA17_Chr7g0266001 25.303 577 376 12 37 571 44 607 5.57e-40 156
Msa0690720 MtrunA17_Chr4g0069211 23.692 650 416 18 52 657 167 780 9.63e-39 154
Msa0690720 MtrunA17_Chr4g0069211 35.407 209 132 2 41 247 835 1042 8.25e-32 132
Msa0690720 MtrunA17_Chr3g0093331 37.069 232 141 4 72 299 18 248 2.29e-34 132
Msa0690720 MtrunA17_Chr7g0262321 27.174 460 282 10 47 491 563 984 6.20e-34 139
Msa0690720 MtrunA17_Chr7g0262321 22.921 541 370 14 151 674 17 527 8.85e-26 114
Msa0690720 MtrunA17_Chr6g0472481 34.518 197 126 3 52 246 13 208 5.43e-31 122
Msa0690720 MtrunA17_Chr4g0039221 96.429 56 2 0 32 87 9 64 2.60e-30 114
Msa0690720 MtrunA17_Chr7g0215001 25.366 410 215 16 199 559 1 368 1.01e-20 94.7
Msa0690720 MtrunA17_Chr7g0249091 32.171 258 128 11 36 266 87 324 3.48e-19 89.7
Msa0690720 MtrunA17_Chr4g0047831 52.564 78 37 0 173 250 6 83 9.39e-19 82.0
Msa0690720 MtrunA17_Chr4g0050191 64.815 54 17 1 32 85 41 92 5.09e-15 71.6
Msa0690720 MtrunA17_Chr7g0257321 59.259 54 19 1 32 85 3 53 2.28e-14 68.2
Msa0690720 MtrunA17_Chr6g0452071 32.243 214 130 8 48 252 226 433 1.19e-13 73.9
Msa0690720 MtrunA17_Chr1g0178481 29.245 212 129 6 51 253 395 594 3.17e-13 73.2
Msa0690720 MtrunA17_Chr6g0452111 31.776 214 131 8 48 252 1031 1238 6.89e-13 72.4
Msa0690720 MtrunA17_Chr6g0452141 30.233 215 133 8 48 252 1030 1237 7.56e-13 72.4
Msa0690720 MtrunA17_Chr6g0451881 31.944 216 128 9 48 252 1020 1227 9.27e-13 72.0
Msa0690720 MtrunA17_Chr4g0026741 47.222 72 34 1 16 87 37 104 9.66e-13 66.2
Msa0690720 MtrunA17_Chr1g0194031 32.323 198 115 8 48 237 397 583 1.35e-12 71.2
Msa0690720 MtrunA17_Chr4g0041871 31.193 218 115 11 38 237 1005 1205 1.56e-12 71.2
Msa0690720 MtrunA17_Chr4g0041871 30.804 224 138 9 48 265 356 568 2.83e-12 70.5
Msa0690720 MtrunA17_Chr7g0233901 32.338 201 103 10 62 245 384 568 1.71e-12 71.2
Msa0690720 MtrunA17_Chr7g0233901 29.515 227 140 10 48 265 1008 1223 4.03e-11 66.6
Msa0690720 MtrunA17_Chr4g0061601 28.241 216 141 8 48 258 400 606 1.85e-12 70.5
Msa0690720 MtrunA17_Chr3g0093041 25.510 196 127 6 64 253 207 389 2.83e-12 70.1
Msa0690720 MtrunA17_Chr4g0060401 25.541 231 157 7 35 261 613 832 3.36e-12 70.1
Msa0690720 MtrunA17_Chr3g0132711 25.000 196 128 6 64 253 221 403 5.47e-12 68.9
Msa0690720 MtrunA17_Chr6g0452171 30.568 229 138 10 36 252 1021 1240 6.15e-12 69.3
Msa0690720 MtrunA17_Chr3g0123411 29.630 216 137 8 48 258 918 1123 7.25e-12 68.9
Msa0690720 MtrunA17_Chr6g0452041 31.481 216 129 9 48 252 1032 1239 7.81e-12 68.9
Msa0690720 MtrunA17_Chr7g0227391 27.602 221 129 9 52 258 442 645 9.10e-12 68.6
Msa0690720 MtrunA17_Chr1g0193991 31.818 198 116 8 48 237 402 588 9.70e-12 68.9
Msa0690720 MtrunA17_Chr5g0433051 28.448 232 138 9 50 271 479 692 1.20e-11 68.2
Msa0690720 MtrunA17_Chr6g0474071 31.313 198 119 8 48 237 226 414 1.52e-11 67.0
Msa0690720 MtrunA17_Chr2g0285191 31.250 192 110 6 48 229 411 590 1.86e-11 67.8
Msa0690720 MtrunA17_Chr6g0452061 30.233 215 133 8 48 252 542 749 2.01e-11 67.4
Msa0690720 MtrunA17_Chr4g0069351 31.481 216 117 9 36 237 379 577 2.22e-11 67.4
Msa0690720 MtrunA17_Chr3g0119381 31.579 209 111 9 36 229 400 591 2.80e-11 67.4
Msa0690720 MtrunA17_Chr3g0138211 30.189 212 125 7 36 237 397 595 3.74e-11 67.0
Msa0690720 MtrunA17_Chr2g0285301 32.447 188 113 6 48 229 377 556 8.37e-11 65.9
Msa0690720 MtrunA17_Chr6g0481921 28.571 224 129 8 48 258 284 489 8.48e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690720 AT3G21090.1 72.310 697 180 2 1 691 1 690 0.0 1073
Msa0690720 AT1G51500.1 73.284 670 175 3 26 691 18 687 0.0 1025
Msa0690720 AT1G51460.1 60.954 671 251 2 31 691 9 678 0.0 851
Msa0690720 AT1G17840.1 59.680 625 246 5 32 655 50 669 0.0 726
Msa0690720 AT2G28070.2 37.338 616 361 8 29 636 111 709 1.07e-129 400
Msa0690720 AT2G28070.1 37.338 616 361 8 29 636 111 709 1.07e-129 400
Msa0690720 AT2G01320.8 30.993 584 366 12 17 585 48 609 1.09e-83 278
Msa0690720 AT2G01320.5 30.993 584 366 12 17 585 48 609 1.09e-83 278
Msa0690720 AT2G01320.3 30.993 584 366 12 17 585 48 609 2.21e-83 279
Msa0690720 AT2G01320.2 30.993 584 366 12 17 585 48 609 2.24e-83 279
Msa0690720 AT2G01320.1 30.993 584 366 12 17 585 48 609 3.02e-83 278
Msa0690720 AT2G01320.4 30.993 584 366 12 17 585 48 609 3.02e-83 278
Msa0690720 AT2G01320.7 32.041 490 300 8 17 492 48 518 1.05e-77 258
Msa0690720 AT2G01320.6 32.041 490 300 8 17 492 48 518 1.05e-77 258
Msa0690720 AT2G39350.1 33.148 540 338 7 49 571 106 639 3.36e-77 262
Msa0690720 AT3G55090.1 32.156 538 344 5 49 571 104 635 6.26e-76 259
Msa0690720 AT3G55100.1 32.887 523 303 10 44 546 41 535 1.07e-74 254
Msa0690720 AT3G55100.2 32.887 523 303 10 44 546 41 535 1.07e-74 254
Msa0690720 AT1G31770.1 31.086 608 360 15 46 634 75 642 4.56e-74 252
Msa0690720 AT3G55110.1 30.931 569 364 9 50 610 89 636 1.43e-72 249
Msa0690720 AT3G55130.1 30.062 642 380 13 50 639 97 721 3.21e-72 248
Msa0690720 AT2G37360.1 31.041 538 356 7 49 579 130 659 4.38e-72 249
Msa0690720 AT5G13580.1 32.477 545 313 8 49 566 105 621 6.65e-72 248
Msa0690720 AT1G71960.1 32.673 606 360 22 50 635 81 658 8.17e-72 246
Msa0690720 AT5G06530.3 31.203 532 341 11 31 546 156 678 4.26e-71 244
Msa0690720 AT5G06530.2 31.203 532 341 11 31 546 156 678 1.35e-70 244
Msa0690720 AT5G06530.1 31.203 532 341 11 31 546 156 678 1.35e-70 244
Msa0690720 AT2G13610.1 29.079 619 394 11 35 635 45 636 4.04e-69 238
Msa0690720 AT3G53510.1 31.354 539 344 7 49 579 123 643 1.09e-68 239
Msa0690720 AT4G27420.1 34.848 462 247 11 46 487 60 487 1.47e-68 236
Msa0690720 AT3G25620.2 30.512 508 330 11 48 546 95 588 1.26e-66 232
Msa0690720 AT4G25750.1 30.405 592 350 15 52 634 30 568 1.23e-65 227
Msa0690720 AT5G06530.4 31.504 492 314 10 69 546 1 483 3.31e-65 224
Msa0690720 AT3G13220.1 32.203 531 327 13 50 567 104 614 1.94e-64 226
Msa0690720 AT1G53270.1 29.174 593 359 13 50 637 48 584 6.27e-63 220
Msa0690720 AT3G25620.1 36.612 366 214 9 48 406 95 449 1.96e-62 216
Msa0690720 AT5G19410.2 27.212 599 385 14 52 641 75 631 6.61e-61 216
Msa0690720 AT5G19410.1 27.212 599 385 14 52 641 66 622 7.02e-61 215
Msa0690720 AT1G15210.1 29.443 574 357 13 51 607 866 1408 4.58e-57 211
Msa0690720 AT1G15210.1 25.577 563 358 12 52 571 184 728 1.21e-39 157
Msa0690720 AT5G52860.1 29.027 596 359 16 48 634 40 580 3.11e-56 202
Msa0690720 AT1G59870.1 28.201 578 359 14 51 607 893 1435 3.08e-55 205
Msa0690720 AT1G59870.1 24.465 654 415 18 43 646 177 801 4.57e-43 168
Msa0690720 AT3G53480.1 26.812 552 362 11 36 573 860 1383 6.51e-53 198
Msa0690720 AT3G53480.1 25.588 680 397 26 52 664 189 826 8.36e-46 176
Msa0690720 AT2G37010.2 40.467 257 145 4 32 285 484 735 2.43e-52 196
Msa0690720 AT2G37010.1 40.467 257 145 4 32 285 484 735 2.43e-52 196
Msa0690720 AT1G15520.1 27.899 552 327 15 52 572 852 1363 2.74e-52 196
Msa0690720 AT1G15520.1 27.740 584 341 18 40 571 159 713 1.40e-46 179
Msa0690720 AT1G53390.1 28.620 587 344 16 32 571 507 1065 2.94e-52 196
Msa0690720 AT3G30842.1 30.129 541 325 17 52 573 848 1354 3.26e-52 196
Msa0690720 AT3G30842.1 26.748 572 331 21 52 565 161 702 6.47e-43 167
Msa0690720 AT4G15230.4 26.384 614 385 16 46 636 742 1311 2.08e-51 193
Msa0690720 AT4G15230.4 24.444 720 437 25 19 673 39 716 2.81e-49 187
Msa0690720 AT4G15230.3 26.384 614 385 16 46 636 821 1390 2.26e-51 193
Msa0690720 AT4G15230.3 24.444 720 437 25 19 673 118 795 3.93e-49 187
Msa0690720 AT4G15230.1 26.384 614 385 16 46 636 821 1390 2.26e-51 193
Msa0690720 AT4G15230.1 24.444 720 437 25 19 673 118 795 3.93e-49 187
Msa0690720 AT2G29940.1 28.276 580 359 16 51 606 852 1398 3.89e-51 192
Msa0690720 AT2G29940.1 27.551 588 343 16 37 571 163 720 2.00e-49 187
Msa0690720 AT3G16340.2 27.402 562 354 14 51 588 835 1366 4.11e-51 192
Msa0690720 AT3G16340.2 26.995 589 342 17 32 566 142 696 5.42e-45 174
Msa0690720 AT3G16340.1 27.402 562 354 14 51 588 840 1371 5.38e-51 192
Msa0690720 AT3G16340.1 26.871 588 349 15 32 566 142 701 1.52e-46 179
Msa0690720 AT4G15230.2 24.444 720 437 25 19 673 118 795 3.26e-49 187
Msa0690720 AT4G15230.2 27.829 539 326 15 46 562 821 1318 4.36e-49 186
Msa0690720 AT4G15215.8 27.656 546 344 16 46 573 808 1320 4.12e-49 186
Msa0690720 AT4G15215.8 24.196 715 442 22 17 673 110 782 6.02e-44 171
Msa0690720 AT4G15215.10 27.656 546 344 16 46 573 808 1320 4.12e-49 186
Msa0690720 AT4G15215.10 24.196 715 442 22 17 673 110 782 6.02e-44 171
Msa0690720 AT4G15215.6 27.656 546 344 16 46 573 808 1320 4.12e-49 186
Msa0690720 AT4G15215.6 24.196 715 442 22 17 673 110 782 6.02e-44 171
Msa0690720 AT4G15215.7 27.656 546 344 16 46 573 808 1320 4.12e-49 186
Msa0690720 AT4G15215.7 24.196 715 442 22 17 673 110 782 6.02e-44 171
Msa0690720 AT4G15215.9 27.523 545 346 15 46 573 815 1327 4.79e-49 186
Msa0690720 AT4G15215.9 23.916 715 451 21 17 673 110 789 2.60e-44 172
Msa0690720 AT4G15215.4 27.523 545 346 15 46 573 815 1327 4.79e-49 186
Msa0690720 AT4G15215.4 23.916 715 451 21 17 673 110 789 2.60e-44 172
Msa0690720 AT4G15215.5 27.523 545 346 15 46 573 815 1327 4.79e-49 186
Msa0690720 AT4G15215.5 23.916 715 451 21 17 673 110 789 2.60e-44 172
Msa0690720 AT4G15215.3 27.523 545 346 15 46 573 815 1327 4.79e-49 186
Msa0690720 AT4G15215.3 23.916 715 451 21 17 673 110 789 2.60e-44 172
Msa0690720 AT4G15215.2 27.523 545 346 15 46 573 815 1327 4.79e-49 186
Msa0690720 AT4G15215.2 23.916 715 451 21 17 673 110 789 2.60e-44 172
Msa0690720 AT4G15215.11 27.656 546 344 16 46 573 818 1330 5.20e-49 186
Msa0690720 AT4G15215.11 23.916 715 451 21 17 673 113 792 2.65e-44 172
Msa0690720 AT4G15215.1 27.523 545 346 15 46 573 811 1323 5.23e-49 186
Msa0690720 AT4G15215.1 24.196 715 442 22 17 673 113 785 5.92e-44 171
Msa0690720 AT4G15236.1 26.976 582 354 20 46 599 811 1349 6.94e-49 186
Msa0690720 AT4G15236.1 24.408 676 412 23 43 658 143 779 1.07e-41 164
Msa0690720 AT2G37280.2 24.741 675 419 20 21 636 114 758 2.12e-48 184
Msa0690720 AT2G37280.2 25.981 535 351 10 36 556 823 1326 3.12e-47 181
Msa0690720 AT2G37280.1 24.741 675 419 20 21 636 114 758 2.54e-48 184
Msa0690720 AT2G37280.1 25.906 552 365 11 36 572 823 1345 6.50e-48 183
Msa0690720 AT2G37280.3 25.906 552 365 11 36 572 852 1374 4.70e-48 183
Msa0690720 AT2G37280.3 23.427 747 446 24 21 679 114 822 1.68e-44 172
Msa0690720 AT2G37280.4 25.906 552 365 11 36 572 665 1187 6.00e-48 183
Msa0690720 AT2G37280.4 24.024 666 418 20 64 679 8 635 3.86e-45 174
Msa0690720 AT4G15233.8 26.644 593 342 21 46 599 804 1342 6.58e-48 183
Msa0690720 AT4G15233.8 24.522 628 382 22 65 636 159 750 7.39e-38 152
Msa0690720 AT4G15233.3 26.644 593 342 21 46 599 751 1289 6.64e-48 183
Msa0690720 AT4G15233.3 24.885 655 398 23 38 636 81 697 4.08e-42 165
Msa0690720 AT4G15233.6 26.644 593 342 21 46 599 751 1289 6.64e-48 183
Msa0690720 AT4G15233.6 24.885 655 398 23 38 636 81 697 4.08e-42 165
Msa0690720 AT4G15233.7 26.644 593 342 21 46 599 795 1333 6.67e-48 183
Msa0690720 AT4G15233.7 25.589 637 398 23 38 636 143 741 6.80e-45 174
Msa0690720 AT4G15233.1 26.644 593 342 21 46 599 813 1351 7.11e-48 183
Msa0690720 AT4G15233.1 24.885 655 398 23 38 636 143 759 3.27e-42 166
Msa0690720 AT2G26910.1 27.799 536 340 13 51 567 844 1351 3.18e-47 181
Msa0690720 AT2G26910.1 24.928 694 422 21 45 679 143 796 6.96e-41 161
Msa0690720 AT1G15520.2 27.740 584 341 18 40 571 159 713 1.02e-46 179
Msa0690720 AT1G15520.2 29.613 439 252 13 52 468 852 1255 2.92e-42 166
Msa0690720 AT5G60740.1 40.146 274 149 6 32 302 499 760 1.82e-46 178
Msa0690720 AT4G15233.2 27.491 542 313 18 46 556 813 1305 5.63e-46 177
Msa0690720 AT4G15233.2 24.885 655 398 23 38 636 143 759 2.95e-42 166
Msa0690720 AT4G15233.5 26.451 586 338 21 53 599 677 1208 2.93e-45 175
Msa0690720 AT4G15233.5 25.585 641 401 23 38 640 81 683 4.02e-45 174
Msa0690720 AT4G15233.4 26.451 586 338 21 53 599 677 1208 2.93e-45 175
Msa0690720 AT4G15233.4 25.585 641 401 23 38 640 81 683 4.02e-45 174
Msa0690720 AT1G66950.1 27.101 583 324 22 46 582 874 1401 1.79e-43 169
Msa0690720 AT1G66950.1 26.889 569 355 15 48 571 182 734 3.80e-41 162
Msa0690720 AT2G36380.1 26.667 555 338 16 46 573 873 1385 6.63e-43 167
Msa0690720 AT2G36380.1 25.044 567 368 14 48 571 180 732 2.22e-38 154
Msa0690720 AT3G21080.1 50.340 147 64 3 509 650 105 247 7.84e-37 139
Msa0690720 AT5G61700.2 25.118 211 141 5 29 233 592 791 2.69e-16 83.6
Msa0690720 AT5G61700.4 25.118 211 141 5 29 233 592 791 2.69e-16 83.6
Msa0690720 AT5G61700.1 25.105 239 160 7 29 261 592 817 6.85e-15 79.3
Msa0690720 AT5G61740.3 26.596 188 121 5 29 210 445 621 9.46e-14 75.5
Msa0690720 AT5G61740.1 26.596 188 121 5 29 210 584 760 1.05e-13 75.5
Msa0690720 AT5G61740.2 26.596 188 121 5 29 210 550 726 1.17e-13 75.1
Msa0690720 AT3G47760.1 23.016 252 175 7 16 261 558 796 2.87e-13 73.9
Msa0690720 AT3G47760.2 23.016 252 175 7 16 261 568 806 4.87e-13 73.2
Msa0690720 AT5G39040.1 31.019 216 135 8 48 258 409 615 5.31e-13 72.8
Msa0690720 AT1G70610.2 30.081 246 143 10 52 285 291 519 9.48e-13 71.6
Msa0690720 AT3G47760.3 23.431 239 164 7 29 261 611 836 1.05e-12 72.0
Msa0690720 AT3G47740.1 23.176 233 160 6 35 261 613 832 1.37e-12 71.6
Msa0690720 AT1G70610.1 30.081 246 143 10 52 285 472 700 1.54e-12 71.2
Msa0690720 AT3G47750.1 22.747 233 161 7 35 261 618 837 2.38e-12 70.9
Msa0690720 AT4G28620.1 27.731 238 148 8 28 258 435 655 2.44e-12 70.9
Msa0690720 AT4G28630.1 26.829 246 154 10 28 265 433 660 2.73e-12 70.5
Msa0690720 AT3G47780.1 24.034 233 158 7 35 261 616 835 2.85e-12 70.9
Msa0690720 AT4G18050.1 31.606 193 108 6 48 229 368 547 2.89e-12 70.9
Msa0690720 AT4G18050.2 31.606 193 108 6 48 229 378 557 3.05e-12 70.9
Msa0690720 AT2G47000.4 31.313 198 117 9 48 237 397 583 3.43e-12 70.5
Msa0690720 AT5G58270.1 28.319 226 137 8 43 258 485 695 4.01e-12 70.1
Msa0690720 AT2G47000.3 31.313 198 117 9 48 237 397 583 4.05e-12 70.5
Msa0690720 AT2G47000.7 31.313 198 117 9 48 237 397 583 4.05e-12 70.5
Msa0690720 AT2G47000.2 31.313 198 117 9 48 237 397 583 4.56e-12 70.1
Msa0690720 AT2G47000.6 31.313 198 117 9 48 237 397 583 6.47e-12 69.7
Msa0690720 AT2G47000.5 31.313 198 117 9 48 237 397 583 6.47e-12 69.7
Msa0690720 AT2G47000.1 31.313 198 117 9 48 237 397 583 6.47e-12 69.7
Msa0690720 AT3G47730.1 26.020 196 124 7 64 252 558 739 1.51e-11 68.6
Msa0690720 AT3G47790.1 20.565 248 184 5 17 261 571 808 1.96e-11 68.2
Msa0690720 AT2G36910.1 32.487 197 116 8 48 237 381 567 2.18e-11 68.2
Msa0690720 AT4G25960.1 31.674 221 126 10 48 258 414 619 2.30e-11 68.2
Msa0690720 AT3G47790.3 21.101 218 161 4 17 231 571 780 2.94e-11 67.4
Msa0690720 AT4G25450.1 31.064 235 134 12 48 271 483 700 3.18e-11 67.0
Msa0690720 AT3G47790.2 21.005 219 160 4 17 231 452 661 3.25e-11 67.0
Msa0690720 AT3G47770.1 22.318 233 162 6 35 261 587 806 3.39e-11 67.4
Msa0690720 AT4G25450.3 31.064 235 134 12 48 271 314 531 4.03e-11 66.6
Msa0690720 AT3G47770.2 22.318 233 162 6 35 261 613 832 4.56e-11 67.0
Msa0690720 AT1G10680.2 32.178 202 110 10 48 237 374 560 4.70e-11 67.0
Msa0690720 AT1G10680.1 32.178 202 110 10 48 237 374 560 5.64e-11 66.6
Msa0690720 AT5G61690.2 28.283 198 117 8 64 252 559 740 8.39e-11 65.9

Find 146 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAGATCCTTTCATGAATT+TGG 0.135560 4_4:+58591175 Msa0690720:CDS
ATGAAAGGATCTGCTGAATT+TGG 0.146252 4_4:-58591167 None:intergenic
ATGATTCCCATGAGAAAATT+TGG 0.154614 4_4:-58592578 None:intergenic
TTGAGAAAAGACCTTCTTTC+AGG 0.175896 4_4:+58593978 Msa0690720:CDS
TCTTTCATCATTCCCGTTCT+TGG 0.177169 4_4:+58592409 Msa0690720:CDS
AGAGTTATGTTGCCAAATTT+TGG 0.179448 4_4:+58586120 Msa0690720:CDS
GTTGGTCCTTTCCCAAAATT+TGG 0.179855 4_4:-58586132 None:intergenic
GATGGGAGAGTTTAATGTTT+TGG 0.188563 4_4:-58585793 None:intergenic
TCCTCCTTCTCTTATGTTAC+AGG 0.190030 4_4:+58593870 Msa0690720:CDS
ACATATTCTCCTGTCAGTTT+TGG 0.195140 4_4:-58593785 None:intergenic
AGTATTAGTTTATATGTATA+GGG 0.201229 4_4:+58594205 Msa0690720:three_prime_UTR
TTGATTAGGTACAGCATTAA+TGG 0.237104 4_4:+58585857 Msa0690720:five_prime_UTR
AGGTTGCTTAATGGACTAAA+TGG 0.247817 4_4:+58586159 Msa0690720:CDS
TAAGCCGCTGATTTCTTCTT+TGG 0.253209 4_4:-58590017 None:intergenic
AGTGGCGAAACTGTTTATTT+TGG 0.268980 4_4:+58590340 Msa0690720:CDS
TGGTAGAATCATGGCTATTA+TGG 0.271739 4_4:+58586194 Msa0690720:CDS
AAGCTGCTGTATGGTTCTTT+TGG 0.287102 4_4:-58593957 None:intergenic
GGATAGCGCCAAACAGGTTT+TGG 0.292187 4_4:-58592755 None:intergenic
TTTCTCATGGGAATCATTAC+AGG 0.293620 4_4:+58592584 Msa0690720:CDS
TGATGACCTCTGGATTCTTT+AGG 0.298220 4_4:+58592717 Msa0690720:CDS
CCAACTAAAAGGTTGCTTAA+TGG 0.302201 4_4:+58586150 Msa0690720:CDS
TAGTATTAGTTTATATGTAT+AGG 0.306672 4_4:+58594204 Msa0690720:three_prime_UTR
AGTCAGAATTGATGCATCTT+AGG 0.307460 4_4:-58590719 None:intergenic
CATATAACATGGTGAAATTC+AGG 0.319419 4_4:+58592462 Msa0690720:CDS
TGGAACATTATTTGTGTCCT+TGG 0.320167 4_4:+58594266 Msa0690720:three_prime_UTR
CCGTAACTGATATATGAAAT+TGG 0.321146 4_4:-58592776 None:intergenic
GAAAGAATGAATGGATATTA+TGG 0.333559 4_4:+58592359 Msa0690720:CDS
TTGGGAAAGGACCAACTAAA+AGG 0.333669 4_4:+58586139 Msa0690720:CDS
TGCCATCTGTTACTACTTCC+AGG 0.334733 4_4:+58594005 Msa0690720:CDS
TGATGCAACAATCATTGAAA+TGG 0.335549 4_4:+58590042 Msa0690720:CDS
GCCTGTGGTGCATTTATATC+AGG 0.340620 4_4:+58591666 Msa0690720:CDS
ACTTTGCTTGATACACTTGC+AGG 0.353311 4_4:+58586240 Msa0690720:CDS
CATTAGGTTAGAGCTTTGTT+TGG 0.358856 4_4:+58594367 Msa0690720:three_prime_UTR
TTTATGACTTTCATGTCAAT+TGG 0.367206 4_4:+58591690 Msa0690720:CDS
TTCCATGTAACTGTTTGATT+AGG 0.374845 4_4:+58585843 Msa0690720:five_prime_UTR
TATGTGATAACACACATGTT+AGG 0.376135 4_4:+58593803 Msa0690720:CDS
GACTGTGCAGATAGGTTAAT+AGG 0.377572 4_4:+58590073 Msa0690720:CDS
GTTATATAATTGAATTCTGC+TGG 0.378832 4_4:+58594123 Msa0690720:three_prime_UTR
TTCATTTCTTCAATAAAAGA+TGG 0.384010 4_4:-58591720 None:intergenic
CTGATCTTCCAAAACCTGTT+TGG 0.390665 4_4:+58592747 Msa0690720:CDS
ACAGGAAATGTTCTTCTCAA+TGG 0.391733 4_4:+58589783 Msa0690720:CDS
CAGATAGGTTAATAGGTAAC+TGG 0.395360 4_4:+58590080 Msa0690720:CDS
TCTTCTTTGGACATTGTTGA+TGG 0.414148 4_4:-58590004 None:intergenic
GTCCTAGCCTTATCAGCATT+AGG 0.415707 4_4:+58594351 Msa0690720:three_prime_UTR
ATGGCTATTATGGGTCCTTC+TGG 0.416172 4_4:+58586204 Msa0690720:CDS
TTCAAATCAACATAACAATA+TGG 0.417547 4_4:+58585990 Msa0690720:exon
GCTCTAACCTAATGCTGATA+AGG 0.423408 4_4:-58594358 None:intergenic
CCATTCCAAGTGGTGGGACT+TGG 0.425020 4_4:+58593838 Msa0690720:CDS
TTACGGTGCATGGGCGATAC+AGG 0.428031 4_4:+58592793 Msa0690720:CDS
ATTATGGGTCCTTCTGGCTC+TGG 0.429652 4_4:+58586210 Msa0690720:CDS
GGTAGAATCATGGCTATTAT+GGG 0.431697 4_4:+58586195 Msa0690720:CDS
TGATGAACCGACTAGTGGTT+TGG 0.434110 4_4:+58590186 Msa0690720:CDS
GAAATTGGATAGCGCCAAAC+AGG 0.438877 4_4:-58592761 None:intergenic
CTACGGCTACACTTCCATCT+TGG 0.441109 4_4:+58591635 Msa0690720:CDS
CAGGAAATGTTCTTCTCAAT+GGG 0.444946 4_4:+58589784 Msa0690720:CDS
CATATATCAGTTACGGTGCA+TGG 0.450064 4_4:+58592783 Msa0690720:CDS
CCAATTTCATATATCAGTTA+CGG 0.456412 4_4:+58592776 Msa0690720:CDS
ATGGGAATCATTACAGGAGC+TGG 0.460308 4_4:+58592590 Msa0690720:CDS
TTTACGTGGACAAGGGAAAC+CGG 0.461223 4_4:-58590676 None:intergenic
ATAAGAAAAGAAATCTAGAA+TGG 0.461570 4_4:-58585906 None:intergenic
GATGCAACAATCATTGAAAT+GGG 0.469400 4_4:+58590043 Msa0690720:CDS
GTTGCTTCCACCAACTAGCT+TGG 0.469934 4_4:-58591491 None:intergenic
ACGCAAGAAGATGTGTTGTT+AGG 0.470386 4_4:+58589932 Msa0690720:CDS
TGCTGAGCCTGGTAGAATCA+TGG 0.476639 4_4:+58586185 Msa0690720:CDS
GAGCAATAGCAACCAAGAAC+GGG 0.478605 4_4:-58592421 None:intergenic
ACCAACTAGCTTGGCTTCCA+AGG 0.481452 4_4:-58591482 None:intergenic
ATGACTTTCATGTCAATTGG+AGG 0.485960 4_4:+58591693 Msa0690720:CDS
CCAAGTCCCACCACTTGGAA+TGG 0.495424 4_4:-58593838 None:intergenic
TTTGGGTTACCTGGGAGTAG+TGG 0.496541 4_4:-58593767 None:intergenic
ATGTGATAACACACATGTTA+GGG 0.497145 4_4:+58593804 Msa0690720:CDS
TTGAGATTCTCACAAGGCCT+CGG 0.498086 4_4:+58590152 Msa0690720:CDS
TGCTGCCAAGTCCCACCACT+TGG 0.499759 4_4:-58593843 None:intergenic
GCATATTGTGGTCTTAATAG+AGG 0.502246 4_4:+58586072 Msa0690720:CDS
GGAATCATGATGATGACCTC+TGG 0.502637 4_4:+58592707 Msa0690720:CDS
ATCATTGTATCTATATGTGT+TGG 0.504900 4_4:+58591591 Msa0690720:CDS
GTGAACATGTGTAGAGATGT+TGG 0.507536 4_4:+58591540 Msa0690720:CDS
ATGAAGGGGTTGATGCCTCC+TGG 0.517928 4_4:-58594023 None:intergenic
ACAGGCACCACGAGCCAAGA+TGG 0.518793 4_4:-58591649 None:intergenic
TTCTGACTTTGACGTTGTAA+CGG 0.522158 4_4:+58590734 Msa0690720:CDS
ACCTTGGAAGCCAAGCTAGT+TGG 0.522711 4_4:+58591481 Msa0690720:CDS
GTAGAGATGTTGGTTACTAC+TGG 0.523631 4_4:+58591550 Msa0690720:CDS
GTATTAGTTTATATGTATAG+GGG 0.523840 4_4:+58594206 Msa0690720:three_prime_UTR
TTGGAAGCCAAGCTAGTTGG+TGG 0.528421 4_4:+58591484 Msa0690720:CDS
CTTGAAACTGAGATAAACCT+TGG 0.528878 4_4:+58591465 Msa0690720:CDS
TACCTAATCAAACAGTTACA+TGG 0.532226 4_4:-58585845 None:intergenic
CTTGAGAAGATAGTGAATGA+AGG 0.536692 4_4:-58594039 None:intergenic
TCCTGATATAAATGCACCAC+AGG 0.540257 4_4:-58591667 None:intergenic
TTGAGAAGATAGTGAATGAA+GGG 0.544490 4_4:-58594038 None:intergenic
AGAGCAATAGCAACCAAGAA+CGG 0.544729 4_4:-58592422 None:intergenic
ATCTTGGCTCGTGGTGCCTG+TGG 0.547250 4_4:+58591651 Msa0690720:CDS
AACGCATAGTGAATGAATCC+TGG 0.547925 4_4:-58592485 None:intergenic
CGTTGTAACGGCTACACTGA+AGG 0.548225 4_4:+58590746 Msa0690720:CDS
CTTAGAAATTGTGCTCGTGA+TGG 0.549034 4_4:+58590241 Msa0690720:CDS
ATATATCAGTTACGGTGCAT+GGG 0.552581 4_4:+58592784 Msa0690720:CDS
ATAGAGGAAGCTTCTTAGCA+TGG 0.554454 4_4:+58586088 Msa0690720:CDS
TAGAGGAAGCTTCTTAGCAT+GGG 0.556492 4_4:+58586089 Msa0690720:CDS
AATTAAGCCATTCCAAGTGG+TGG 0.556493 4_4:+58593831 Msa0690720:CDS
CTTACAACAAAACCATAGCC+TGG 0.557488 4_4:-58589819 None:intergenic
GAAATTGTGCTCGTGATGGA+AGG 0.559639 4_4:+58590245 Msa0690720:CDS
CCAGGTAACCCAAAACTGAC+AGG 0.560140 4_4:+58593776 Msa0690720:CDS
TCATACAAGAATGACTTGCT+TGG 0.561045 4_4:+58593731 Msa0690720:CDS
TTAACCTATCTGCACAGTCA+TGG 0.561627 4_4:-58590069 None:intergenic
AGCGTTCAACGTATGCCAGA+AGG 0.563888 4_4:+58591237 Msa0690720:CDS
GTCTCCATGACTGTGCAGAT+AGG 0.568429 4_4:+58590065 Msa0690720:CDS
GAGTTTGATCCACTACTCCC+AGG 0.569657 4_4:+58593758 Msa0690720:CDS
GAGGTATAAGTGGTGGCGAA+AGG 0.574362 4_4:+58590110 Msa0690720:CDS
AACATGGTGAAATTCAGGCC+AGG 0.575455 4_4:+58592467 Msa0690720:CDS
TTCCTTGATGAACCGACTAG+TGG 0.581117 4_4:+58590181 Msa0690720:CDS
GTTGTAACGGCTACACTGAA+GGG 0.582706 4_4:+58590747 Msa0690720:CDS
TGGCATTTGAGAGGTATAAG+TGG 0.586145 4_4:+58590100 Msa0690720:CDS
TGCAAGTGTATCAAGCAAAG+TGG 0.586411 4_4:-58586238 None:intergenic
ATGTTGGTTACTACTGGCTG+AGG 0.586749 4_4:+58591556 Msa0690720:CDS
CATTCACTATCTTCTCAAGA+GGG 0.586786 4_4:+58594043 Msa0690720:CDS
CATCTTAGGAAATGATCAGA+AGG 0.591308 4_4:-58590705 None:intergenic
ATTAAGCCATTCCAAGTGGT+GGG 0.591525 4_4:+58593832 Msa0690720:CDS
AACCACTAGTCGGTTCATCA+AGG 0.591779 4_4:-58590183 None:intergenic
TCCTGTAACATAAGAGAAGG+AGG 0.591821 4_4:-58593871 None:intergenic
TCATTCACTATCTTCTCAAG+AGG 0.594906 4_4:+58594042 Msa0690720:CDS
AACCTAATGCTGATAAGGCT+AGG 0.598888 4_4:-58594353 None:intergenic
GCGTTCAACGTATGCCAGAA+GGG 0.602784 4_4:+58591238 Msa0690720:CDS
TACACTTCCATCTTGGCTCG+TGG 0.602988 4_4:+58591642 Msa0690720:CDS
GAGAGTGAGGAAGCATATTG+TGG 0.603094 4_4:+58586060 Msa0690720:CDS
CTCCTGGAAGTAGTAACAGA+TGG 0.608454 4_4:-58594007 None:intergenic
AGTGCAAAGACTTCACTGCT+AGG 0.611217 4_4:-58590292 None:intergenic
ATAGGTAACTGGCATTTGAG+AGG 0.611647 4_4:+58590091 Msa0690720:CDS
GCTGTAGCCAAATTCATGAA+AGG 0.611893 4_4:-58591182 None:intergenic
ATATCCTGTAACATAAGAGA+AGG 0.613354 4_4:-58593874 None:intergenic
ATGCAACATGGACGAGAGTG+AGG 0.623293 4_4:+58586047 Msa0690720:CDS
ATAATAGCCATGATTCTACC+AGG 0.623399 4_4:-58586192 None:intergenic
CAACAACAAAGGATGCAACA+TGG 0.635595 4_4:+58586035 Msa0690720:CDS
TTGAATTAAGCCATTCCAAG+TGG 0.642469 4_4:+58593828 Msa0690720:CDS
TGAAGCTAAAATGGCAATCG+AGG 0.650043 4_4:+58590363 Msa0690720:CDS
TGAGAAGATAGTGAATGAAG+GGG 0.657426 4_4:-58594037 None:intergenic
ATGGAGATTGAAGCAGCAAG+TGG 0.659585 4_4:+58586009 Msa0690720:CDS
AGCAACTCAAAACACTGACA+AGG 0.665776 4_4:+58591508 Msa0690720:CDS
CATTTGAGAGGTATAAGTGG+TGG 0.666459 4_4:+58590103 Msa0690720:CDS
AGTGATTGAGAGTCTCATGA+TGG 0.667256 4_4:+58592538 Msa0690720:CDS
CTACACTGAAGGGATCTCAA+AGG 0.667394 4_4:+58590757 Msa0690720:CDS
TTGCACTTGAGATTCTCACA+AGG 0.675435 4_4:+58590146 Msa0690720:CDS
TTGCACAATCACATATAACA+TGG 0.677547 4_4:+58592451 Msa0690720:CDS
GCACTGTCCAAACCACTAGT+CGG 0.680827 4_4:-58590193 None:intergenic
GCAAGTGGTAGCAACAACAA+AGG 0.683774 4_4:+58586024 Msa0690720:CDS
TAGCAACCTAAAGAATCCAG+AGG 0.696592 4_4:-58592723 None:intergenic
ATGTCCAAAGAAGAAATCAG+CGG 0.710305 4_4:+58590013 Msa0690720:CDS
TCATCAAGGAACAGTAACCG+AGG 0.728662 4_4:-58590169 None:intergenic
CATCTGTTACTACTTCCAGG+AGG 0.782086 4_4:+58594008 Msa0690720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAATTTATGATTTTCT+TGG + chr4_4:58587501-58587520 Msa0690720:intron 10.0%
!!! TATTAATTTATGATTTTCTT+GGG + chr4_4:58587502-58587521 Msa0690720:intron 10.0%
!!! TAATAAGATAATAATTTTTC+GGG - chr4_4:58587550-58587569 None:intergenic 10.0%
!!! TCTAAAATAATAAATTTGTT+CGG - chr4_4:58587616-58587635 None:intergenic 10.0%
!!! TTTTTATATTATAAGACAAT+TGG + chr4_4:58587730-58587749 Msa0690720:intron 10.0%
!! TACATTTAAAAATTTATAGA+TGG + chr4_4:58588081-58588100 Msa0690720:intron 10.0%
!!! ATCTTTATGTTATTAAATTT+TGG + chr4_4:58588497-58588516 Msa0690720:intron 10.0%
!!! TTATTTAGAATTTTATTTCA+TGG - chr4_4:58589060-58589079 None:intergenic 10.0%
!!! TTTTAAGTTTAGTTTATATT+TGG + chr4_4:58589126-58589145 Msa0690720:intron 10.0%
!!! ACAAATTCTTTTATTCAATT+AGG + chr4_4:58586466-58586485 Msa0690720:intron 15.0%
!! TAATTAAATGTACCAAAAAT+TGG + chr4_4:58586497-58586516 Msa0690720:intron 15.0%
!! ATTAACAAACATTACAATTA+TGG + chr4_4:58586711-58586730 Msa0690720:intron 15.0%
!! AATCCAATTATAATTTAACT+AGG + chr4_4:58586930-58586949 Msa0690720:intron 15.0%
!! ATCCAATTATAATTTAACTA+GGG + chr4_4:58586931-58586950 Msa0690720:intron 15.0%
!!! ATATGAGCAAATTATTTTTA+GGG - chr4_4:58587002-58587021 None:intergenic 15.0%
!!! AATATGAGCAAATTATTTTT+AGG - chr4_4:58587003-58587022 None:intergenic 15.0%
!!! AATGTTTTTTTTTCTTTCTT+AGG + chr4_4:58587040-58587059 Msa0690720:intron 15.0%
!!! ATGTTTTTTTTTCTTTCTTA+GGG + chr4_4:58587041-58587060 Msa0690720:intron 15.0%
!! ATAAAATACTCCTATATTAA+AGG - chr4_4:58587117-58587136 None:intergenic 15.0%
!! TCTAAATTAATAAATTTCTC+TGG - chr4_4:58587229-58587248 None:intergenic 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG + chr4_4:58587578-58587597 Msa0690720:intron 15.0%
!!! AAACTCTTTAATTTAATACT+TGG - chr4_4:58587654-58587673 None:intergenic 15.0%
!! CTTTCTTATATCATTTATTA+AGG - chr4_4:58587874-58587893 None:intergenic 15.0%
!! AATAGAGTAATAAATAGTTA+AGG + chr4_4:58587915-58587934 Msa0690720:intron 15.0%
!! ATAAATAGTTAAGGATATAT+AGG + chr4_4:58587924-58587943 Msa0690720:intron 15.0%
!!! AAAGATTTGGAAATAAATTT+TGG - chr4_4:58588439-58588458 None:intergenic 15.0%
!!! TTTATGTTATTAAATTTTGG+TGG + chr4_4:58588500-58588519 Msa0690720:intron 15.0%
!!! ATTTTCTTTTATAATAGAGA+CGG + chr4_4:58588735-58588754 Msa0690720:intron 15.0%
!!! ACATATTTGTAATGATTTTT+TGG + chr4_4:58589089-58589108 Msa0690720:intron 15.0%
!! AATTACTAAATAATACATAC+AGG - chr4_4:58590786-58590805 None:intergenic 15.0%
!! TAACAAAATCAATATTATGA+AGG - chr4_4:58591421-58591440 None:intergenic 15.0%
!! AATGTAAAGTGTATTATATT+TGG + chr4_4:58592903-58592922 Msa0690720:intron 15.0%
!!! GTGTTTTCAATTTAAATAAT+TGG - chr4_4:58593467-58593486 None:intergenic 15.0%
!!! TTAACTTCTAAAAAGATATT+AGG - chr4_4:58593555-58593574 None:intergenic 15.0%
!! AATGCTAATTAATATGAATT+TGG + chr4_4:58593699-58593718 Msa0690720:intron 15.0%
!!! TAGTATTAGTTTATATGTAT+AGG + chr4_4:58594204-58594223 Msa0690720:three_prime_UTR 15.0%
!!! AGTATTAGTTTATATGTATA+GGG + chr4_4:58594205-58594224 Msa0690720:three_prime_UTR 15.0%
!! TTTAAAAAAAATGTAATCCA+AGG - chr4_4:58594286-58594305 None:intergenic 15.0%
!! ATAAGAAAAGAAATCTAGAA+TGG - chr4_4:58585909-58585928 None:intergenic 20.0%
!! TTCAAATCAACATAACAATA+TGG + chr4_4:58585990-58586009 Msa0690720:exon 20.0%
!!! AACCAAAATATCATGTTTTT+TGG + chr4_4:58586386-58586405 Msa0690720:intron 20.0%
!!! TTCCAAAAAACATGATATTT+TGG - chr4_4:58586391-58586410 None:intergenic 20.0%
!! GAAACTATCAAACTAATAAA+AGG - chr4_4:58586431-58586450 None:intergenic 20.0%
!! TTATGGGAAGAATAATATTA+AGG + chr4_4:58586956-58586975 Msa0690720:intron 20.0%
!! CTCTATAAATTAATAATGTC+AGG + chr4_4:58587202-58587221 Msa0690720:intron 20.0%
!! TTTAAGTATACCAAACAAAA+AGG + chr4_4:58587296-58587315 Msa0690720:intron 20.0%
!! AGTAACATTAAAGTTTCATT+TGG + chr4_4:58587950-58587969 Msa0690720:intron 20.0%
!! TTTCATTTGGTATTGTAAAA+CGG + chr4_4:58587963-58587982 Msa0690720:intron 20.0%
!! AAGATATAAGATAAGGAAAA+GGG - chr4_4:58588241-58588260 None:intergenic 20.0%
!! AAAGATATAAGATAAGGAAA+AGG - chr4_4:58588242-58588261 None:intergenic 20.0%
!!! TATTAACTTGTTCTTTTCAA+TGG - chr4_4:58588470-58588489 None:intergenic 20.0%
!!! TAACTTATGGATTTTGAAAA+GGG + chr4_4:58588565-58588584 Msa0690720:intron 20.0%
!! GATGCATTTAATCTATATTA+AGG - chr4_4:58588689-58588708 None:intergenic 20.0%
!!! TTTTCTTTTATAATAGAGAC+GGG + chr4_4:58588736-58588755 Msa0690720:intron 20.0%
!! TTATGAAGGTAATGAAATAT+AGG - chr4_4:58588805-58588824 None:intergenic 20.0%
!!! AGATCTTAGTTTAGATTTTA+AGG + chr4_4:58588865-58588884 Msa0690720:intron 20.0%
!!! ATTTGGAGATATTTTTTTTG+AGG + chr4_4:58589143-58589162 Msa0690720:intron 20.0%
!! TGGTAATTATTATCAACTTA+CGG - chr4_4:58589393-58589412 None:intergenic 20.0%
!!! TTGAATTTGATAATTGATCA+TGG - chr4_4:58589413-58589432 None:intergenic 20.0%
!! CTAAATATAAATGCTTACAT+TGG - chr4_4:58591291-58591310 None:intergenic 20.0%
!! TTCATTTCTTCAATAAAAGA+TGG - chr4_4:58591723-58591742 None:intergenic 20.0%
!!! ATCTTTTATTGAAGAAATGA+AGG + chr4_4:58591722-58591741 Msa0690720:CDS 20.0%
!! CAGTAATATGAGTTTATAAA+CGG + chr4_4:58591788-58591807 Msa0690720:intron 20.0%
!!! TTAACATAAGCTATTTTCAA+AGG - chr4_4:58592138-58592157 None:intergenic 20.0%
!! TATAATCAAAGTTGAAATGA+AGG - chr4_4:58592242-58592261 None:intergenic 20.0%
!!! TTTTATAGAGAAAGAATGAA+TGG + chr4_4:58592350-58592369 Msa0690720:CDS 20.0%
!!! GATTTTGACTAAACTAATTA+TGG + chr4_4:58592866-58592885 Msa0690720:intron 20.0%
!! GAATAAGTAAGAATCAATTA+TGG + chr4_4:58592985-58593004 Msa0690720:intron 20.0%
!!! AACATAAATGACATCTTTTA+AGG + chr4_4:58593198-58593217 Msa0690720:intron 20.0%
!! AGATAAAATAAATGTGCAAT+TGG - chr4_4:58593226-58593245 None:intergenic 20.0%
!! ATATTTGTCATCAATAAAGA+TGG - chr4_4:58593527-58593546 None:intergenic 20.0%
!!! GTATTAGTTTATATGTATAG+GGG + chr4_4:58594206-58594225 Msa0690720:three_prime_UTR 20.0%
!! TCCAATTAAGATAAGAAAAA+TGG + chr4_4:58594246-58594265 Msa0690720:three_prime_UTR 20.0%
!!! TCCATTTTTCTTATCTTAAT+TGG - chr4_4:58594250-58594269 None:intergenic 20.0%
!!! TTTAATGTTTTGGGTATGAA+CGG - chr4_4:58585786-58585805 None:intergenic 25.0%
!! AAAGGGAAATATCCAATTTT+TGG - chr4_4:58586512-58586531 None:intergenic 25.0%
! AAAAAAATTCAACTCAACTC+TGG + chr4_4:58586620-58586639 Msa0690720:intron 25.0%
!!! TATTTTTGACTTGACAGAAT+TGG - chr4_4:58586748-58586767 None:intergenic 25.0%
! ATAATCACCAAGGAAAAAAT+TGG + chr4_4:58586813-58586832 Msa0690720:intron 25.0%
! TAATCACCAAGGAAAAAATT+GGG + chr4_4:58586814-58586833 Msa0690720:intron 25.0%
! TGCCCTAGTTAAATTATAAT+TGG - chr4_4:58586936-58586955 None:intergenic 25.0%
!! ATAATTTAACTAGGGCATTA+TGG + chr4_4:58586939-58586958 Msa0690720:intron 25.0%
!! TAATTTAACTAGGGCATTAT+GGG + chr4_4:58586940-58586959 Msa0690720:intron 25.0%
!!! TTTTGAAGAGGAATCTATAT+AGG + chr4_4:58587072-58587091 Msa0690720:intron 25.0%
! AATACTCCTATATTAAAGGA+TGG - chr4_4:58587113-58587132 None:intergenic 25.0%
!!! GGAGTATTTTATCAAAATCA+TGG + chr4_4:58587125-58587144 Msa0690720:intron 25.0%
! ATGGATATTAAGATAAGATG+TGG + chr4_4:58587144-58587163 Msa0690720:intron 25.0%
!!! ACAGAGGAAGTATTAATAAA+GGG + chr4_4:58588036-58588055 Msa0690720:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr4_4:58588291-58588310 None:intergenic 25.0%
!! AATTTGCTTATAATAGTGAC+CGG + chr4_4:58588326-58588345 Msa0690720:intron 25.0%
!!! AGTATTGATTTTTGTAGAGT+TGG + chr4_4:58588380-58588399 Msa0690720:intron 25.0%
!!! GTATTGATTTTTGTAGAGTT+GGG + chr4_4:58588381-58588400 Msa0690720:intron 25.0%
!!! TGTTATTAAATTTTGGTGGT+TGG + chr4_4:58588504-58588523 Msa0690720:intron 25.0%
!! CTTTTCAAAATCCATAAGTT+AGG - chr4_4:58588566-58588585 None:intergenic 25.0%
!!! CTAACTTATGGATTTTGAAA+AGG + chr4_4:58588564-58588583 Msa0690720:intron 25.0%
! GATAAAAAGAACTCTTATGA+AGG - chr4_4:58588819-58588838 None:intergenic 25.0%
!! TTCTTTTTATCTCAATTCTC+AGG + chr4_4:58588828-58588847 Msa0690720:intron 25.0%
!!! ACTTGAGTCTTATTTTTATG+TGG + chr4_4:58588972-58588991 Msa0690720:intron 25.0%
!! TAACTTACAAACCGTATTTT+GGG - chr4_4:58589342-58589361 None:intergenic 25.0%
!! TTTTATGATACGTGATGATT+AGG - chr4_4:58589535-58589554 None:intergenic 25.0%
! TAATCATCACGTATCATAAA+AGG + chr4_4:58589534-58589553 Msa0690720:intron 25.0%
! ATTGTAATTTCATCTAACAC+TGG - chr4_4:58589592-58589611 None:intergenic 25.0%
!!! TAGTTGATACATAACTTTTC+AGG + chr4_4:58589704-58589723 Msa0690720:intron 25.0%
!!! AGTTGATACATAACTTTTCA+GGG + chr4_4:58589705-58589724 Msa0690720:intron 25.0%
! AAATGTCTAAATGTTGTTAC+AGG + chr4_4:58589735-58589754 Msa0690720:intron 25.0%
! TTAATTGATGTTGAAACTTC+AGG + chr4_4:58589901-58589920 Msa0690720:intron 25.0%
!!! TTATTTTGGTGAAGCTAAAA+TGG + chr4_4:58590354-58590373 Msa0690720:CDS 25.0%
!! TCGAGGTATAAATACATTTT+TGG + chr4_4:58590380-58590399 Msa0690720:intron 25.0%
! AATTCTAAACATATGCTTTG+AGG + chr4_4:58590802-58590821 Msa0690720:intron 25.0%
! ATTATATACTCATCCTACTT+AGG + chr4_4:58590838-58590857 Msa0690720:intron 25.0%
!! AATTTGGAACATCCTAATAA+GGG - chr4_4:58591154-58591173 None:intergenic 25.0%
! CAGTTGAATTATATGTAATG+AGG - chr4_4:58591321-58591340 None:intergenic 25.0%
! AAAGATTATCCTAAGGATTT+CGG - chr4_4:58591358-58591377 None:intergenic 25.0%
! GTTAATGATAAATGTACTAC+AGG + chr4_4:58591437-58591456 Msa0690720:intron 25.0%
! ATCATTGTATCTATATGTGT+TGG + chr4_4:58591591-58591610 Msa0690720:CDS 25.0%
!!! GGAACTATCTATTTTGATAT+TGG + chr4_4:58591612-58591631 Msa0690720:CDS 25.0%
!!! ATCTATTTTGATATTGGCTA+CGG + chr4_4:58591618-58591637 Msa0690720:CDS 25.0%
! TTTATGACTTTCATGTCAAT+TGG + chr4_4:58591690-58591709 Msa0690720:CDS 25.0%
!! GATAGTTTTCATCAATACTT+TGG + chr4_4:58591810-58591829 Msa0690720:intron 25.0%
! AATCTCACAAGTATTTATAC+TGG - chr4_4:58591893-58591912 None:intergenic 25.0%
! TAAATACTTGTGAGATTGTT+TGG + chr4_4:58591896-58591915 Msa0690720:intron 25.0%
! CTTATTTCCATAAAATCTCA+AGG + chr4_4:58591962-58591981 Msa0690720:intron 25.0%
! TGAATAAACACATATCTTAC+AGG - chr4_4:58592286-58592305 None:intergenic 25.0%
! ATCAACAAAAACATCATAAG+CGG - chr4_4:58592314-58592333 None:intergenic 25.0%
!! TTTGTTGATATATCTGAAAC+AGG + chr4_4:58592325-58592344 Msa0690720:intron 25.0%
! GAAAGAATGAATGGATATTA+TGG + chr4_4:58592359-58592378 Msa0690720:CDS 25.0%
!! TTTTTCACTGTTAACATCTA+TGG + chr4_4:58592506-58592525 Msa0690720:CDS 25.0%
! GGAATCATTGTAAGAAAAAA+TGG + chr4_4:58592611-58592630 Msa0690720:intron 25.0%
! ATATGAAAAATTAACGCATG+TGG - chr4_4:58592668-58592687 None:intergenic 25.0%
! CCAATTTCATATATCAGTTA+CGG + chr4_4:58592776-58592795 Msa0690720:CDS 25.0%
! TCTGTTGAACAATAAATTTG+AGG + chr4_4:58592942-58592961 Msa0690720:intron 25.0%
!! TGATTTTACAGGTATAGAAT+TGG - chr4_4:58593054-58593073 None:intergenic 25.0%
!!! GGAAGAAAAATTGATTTTAC+AGG - chr4_4:58593065-58593084 None:intergenic 25.0%
!! AAACATACACTAATTGATTC+CGG + chr4_4:58593100-58593119 Msa0690720:intron 25.0%
! ATGTTTGTCATCAATAAAGA+TGG - chr4_4:58593385-58593404 None:intergenic 25.0%
!! CATATTAATTAGCATTGAGA+TGG - chr4_4:58593695-58593714 None:intergenic 25.0%
! ATTAATATGAATTTGGATGC+AGG + chr4_4:58593706-58593725 Msa0690720:intron 25.0%
! TTAATATGAATTTGGATGCA+GGG + chr4_4:58593707-58593726 Msa0690720:intron 25.0%
!! GCAGTAAGTTTTCTATATAA+TGG - chr4_4:58593938-58593957 None:intergenic 25.0%
!!! TTCTTCGTAATTGTTTTTCT+AGG - chr4_4:58594089-58594108 None:intergenic 25.0%
! GTTATATAATTGAATTCTGC+TGG + chr4_4:58594123-58594142 Msa0690720:three_prime_UTR 25.0%
! ATGGGAGAGTTTAATGTTTT+GGG - chr4_4:58585795-58585814 None:intergenic 30.0%
TTCCATGTAACTGTTTGATT+AGG + chr4_4:58585843-58585862 Msa0690720:five_prime_UTR 30.0%
TACCTAATCAAACAGTTACA+TGG - chr4_4:58585848-58585867 None:intergenic 30.0%
TTGATTAGGTACAGCATTAA+TGG + chr4_4:58585857-58585876 Msa0690720:five_prime_UTR 30.0%
! AGAGTTATGTTGCCAAATTT+TGG + chr4_4:58586120-58586139 Msa0690720:CDS 30.0%
! GAGTTATGTTGCCAAATTTT+GGG + chr4_4:58586121-58586140 Msa0690720:CDS 30.0%
CCTTGAATTTACTCATGTTT+GGG - chr4_4:58586357-58586376 None:intergenic 30.0%
ACCTTGAATTTACTCATGTT+TGG - chr4_4:58586358-58586377 None:intergenic 30.0%
! AGTTTGATAGTTTCTCACTA+AGG + chr4_4:58586437-58586456 Msa0690720:intron 30.0%
GTACTTCTAAATAATCACCA+AGG + chr4_4:58586803-58586822 Msa0690720:intron 30.0%
AATCACCAAGGAAAAAATTG+GGG + chr4_4:58586815-58586834 Msa0690720:intron 30.0%
!!! ATAAACCCCAATTTTTTCCT+TGG - chr4_4:58586823-58586842 None:intergenic 30.0%
CATTATTTGTAGCTGTATAG+TGG - chr4_4:58586896-58586915 None:intergenic 30.0%
TACAGCTACAAATAATGAAG+TGG + chr4_4:58586899-58586918 Msa0690720:intron 30.0%
!! GACTAATTTGCCTTTTTGTT+TGG - chr4_4:58587309-58587328 None:intergenic 30.0%
GTACAGTAAATGTAAACAAG+AGG + chr4_4:58587427-58587446 Msa0690720:intron 30.0%
TTGGGACCGAAAATTATAAA+GGG + chr4_4:58587520-58587539 Msa0690720:intron 30.0%
! GGAGATCCCTTTATAATTTT+CGG - chr4_4:58587529-58587548 None:intergenic 30.0%
AAAACGTCATATAATTTGGG+CGG - chr4_4:58587772-58587791 None:intergenic 30.0%
CCCAAAACGTCATATAATTT+GGG - chr4_4:58587775-58587794 None:intergenic 30.0%
! CCCAAATTATATGACGTTTT+GGG + chr4_4:58587772-58587791 Msa0690720:intron 30.0%
ACCCAAAACGTCATATAATT+TGG - chr4_4:58587776-58587795 None:intergenic 30.0%
! TCAAATTATAAGTCGCTTTG+AGG - chr4_4:58588014-58588033 None:intergenic 30.0%
TCAAAGCGACTTATAATTTG+AGG + chr4_4:58588013-58588032 Msa0690720:intron 30.0%
!! GACAGAGGAAGTATTAATAA+AGG + chr4_4:58588035-58588054 Msa0690720:intron 30.0%
CATGGCAAAGATATAAGATA+AGG - chr4_4:58588248-58588267 None:intergenic 30.0%
TATATTGTAGCATCTTAGCA+TGG - chr4_4:58588266-58588285 None:intergenic 30.0%
!! TTATGGATTTTGAAAAGGGT+AGG + chr4_4:58588569-58588588 Msa0690720:intron 30.0%
!!! TTGTAATGATTTTTTGGCGT+CGG + chr4_4:58589095-58589114 Msa0690720:intron 30.0%
! CTAACTTACAAACCGTATTT+TGG - chr4_4:58589343-58589362 None:intergenic 30.0%
TTATCAACTTACGGTGAAAA+GGG - chr4_4:58589384-58589403 None:intergenic 30.0%
ATTATCAACTTACGGTGAAA+AGG - chr4_4:58589385-58589404 None:intergenic 30.0%
AAATGAGAAGACAAAAACCA+TGG - chr4_4:58589488-58589507 None:intergenic 30.0%
ATCAACTAGCAAATTGCATA+TGG - chr4_4:58589692-58589711 None:intergenic 30.0%
GCAAAAAATGTTGTAATGAC+AGG + chr4_4:58589765-58589784 Msa0690720:CDS 30.0%
! ACAAACTCTTTCTTTTGTTG+AGG + chr4_4:58589851-58589870 Msa0690720:intron 30.0%
TGATGCAACAATCATTGAAA+TGG + chr4_4:58590042-58590061 Msa0690720:CDS 30.0%
GATGCAACAATCATTGAAAT+GGG + chr4_4:58590043-58590062 Msa0690720:CDS 30.0%
TTGATATGTTTCAGATACTC+AGG - chr4_4:58590529-58590548 None:intergenic 30.0%
ATTCATACAATATTGACACG+TGG + chr4_4:58590557-58590576 Msa0690720:intron 30.0%
CTGAAATTGTTGAACAAATG+AGG - chr4_4:58591053-58591072 None:intergenic 30.0%
TCAGAAACAACTTATACCTT+AGG + chr4_4:58591069-58591088 Msa0690720:intron 30.0%
ACAAACAAATCCATGTCAAT+AGG - chr4_4:58591118-58591137 None:intergenic 30.0%
! ATTTGGAACATCCTAATAAG+GGG - chr4_4:58591153-58591172 None:intergenic 30.0%
! GAATTTGGAACATCCTAATA+AGG - chr4_4:58591155-58591174 None:intergenic 30.0%
GACAGAAAAAGATTATCCTA+AGG - chr4_4:58591365-58591384 None:intergenic 30.0%
ATGATAAATGTACTACAGGA+AGG + chr4_4:58591441-58591460 Msa0690720:intron 30.0%
TGATAAATGTACTACAGGAA+GGG + chr4_4:58591442-58591461 Msa0690720:intron 30.0%
! ATCAATACTTTGGAAGTGTA+TGG + chr4_4:58591820-58591839 Msa0690720:intron 30.0%
AGAACTTATTTGAGTCTCTT+TGG + chr4_4:58591844-58591863 Msa0690720:intron 30.0%
AAGACTTATACTAGTGCTTA+TGG - chr4_4:58592107-58592126 None:intergenic 30.0%
TAAGCACTAGTATAAGTCTT+TGG + chr4_4:58592107-58592126 Msa0690720:intron 30.0%
ACAGGAACTTATGTATAAGT+TGG - chr4_4:58592268-58592287 None:intergenic 30.0%
TTGCACAATCACATATAACA+TGG + chr4_4:58592451-58592470 Msa0690720:CDS 30.0%
CATATAACATGGTGAAATTC+AGG + chr4_4:58592462-58592481 Msa0690720:CDS 30.0%
! ACTTGTTCCAAATTTTCTCA+TGG + chr4_4:58592571-58592590 Msa0690720:CDS 30.0%
! CTTGTTCCAAATTTTCTCAT+GGG + chr4_4:58592572-58592591 Msa0690720:CDS 30.0%
ATGATTCCCATGAGAAAATT+TGG - chr4_4:58592581-58592600 None:intergenic 30.0%
! TATATTGTTGTTGTTCATGC+AGG + chr4_4:58592685-58592704 Msa0690720:intron 30.0%
! ATATTGTTGTTGTTCATGCA+GGG + chr4_4:58592686-58592705 Msa0690720:intron 30.0%
CCGTAACTGATATATGAAAT+TGG - chr4_4:58592779-58592798 None:intergenic 30.0%
!! AGAATTGGTATTGACATGTT+TGG - chr4_4:58593039-58593058 None:intergenic 30.0%
!! TGTTACTTTAGTCTCAAGTA+TGG - chr4_4:58593182-58593201 None:intergenic 30.0%
ATGCTCTATGTATAATAGCA+CGG + chr4_4:58593302-58593321 Msa0690720:intron 30.0%
TCAATAAAGATGGAAGTGAT+TGG - chr4_4:58593375-58593394 None:intergenic 30.0%
TATGTGATAACACACATGTT+AGG + chr4_4:58593803-58593822 Msa0690720:CDS 30.0%
ATGTGATAACACACATGTTA+GGG + chr4_4:58593804-58593823 Msa0690720:CDS 30.0%
ATATCCTGTAACATAAGAGA+AGG - chr4_4:58593877-58593896 None:intergenic 30.0%
!!! TTTTGTTGTTCTCAAGTTCA+AGG + chr4_4:58593901-58593920 Msa0690720:CDS 30.0%
TTGAGAAGATAGTGAATGAA+GGG - chr4_4:58594041-58594060 None:intergenic 30.0%
GAAAAACAATTACGAAGAAG+AGG + chr4_4:58594090-58594109 Msa0690720:exon 30.0%
! GATGGGAGAGTTTAATGTTT+TGG - chr4_4:58585796-58585815 None:intergenic 35.0%
! GCATATTGTGGTCTTAATAG+AGG + chr4_4:58586072-58586091 Msa0690720:CDS 35.0%
!! ATGTTGCCAAATTTTGGGAA+AGG + chr4_4:58586126-58586145 Msa0690720:CDS 35.0%
! CCATTAAGCAACCTTTTAGT+TGG - chr4_4:58586153-58586172 None:intergenic 35.0%
CCAACTAAAAGGTTGCTTAA+TGG + chr4_4:58586150-58586169 Msa0690720:CDS 35.0%
!! AGGTTGCTTAATGGACTAAA+TGG + chr4_4:58586159-58586178 Msa0690720:CDS 35.0%
ATAATAGCCATGATTCTACC+AGG - chr4_4:58586195-58586214 None:intergenic 35.0%
TGGTAGAATCATGGCTATTA+TGG + chr4_4:58586194-58586213 Msa0690720:CDS 35.0%
GGTAGAATCATGGCTATTAT+GGG + chr4_4:58586195-58586214 Msa0690720:CDS 35.0%
CCCAAACATGAGTAAATTCA+AGG + chr4_4:58586354-58586373 Msa0690720:intron 35.0%
! TTGATAGTTTCTCACTAAGG+TGG + chr4_4:58586440-58586459 Msa0690720:intron 35.0%
AGACCAAGCCATTAAAACAA+GGG - chr4_4:58586663-58586682 None:intergenic 35.0%
! TTTGTAGCTGTATAGTGGAA+AGG - chr4_4:58586891-58586910 None:intergenic 35.0%
CTCATATTAGAGAACACGAA+AGG + chr4_4:58587015-58587034 Msa0690720:intron 35.0%
!!! AGGGACATGTTTTTTTGAAG+AGG + chr4_4:58587060-58587079 Msa0690720:intron 35.0%
TATATTAAAGGATGGAGGGA+GGG - chr4_4:58587105-58587124 None:intergenic 35.0%
CTCCTATATTAAAGGATGGA+GGG - chr4_4:58587109-58587128 None:intergenic 35.0%
ACTCCTATATTAAAGGATGG+AGG - chr4_4:58587110-58587129 None:intergenic 35.0%
ACTACTGTGTTCATATGCAT+TGG + chr4_4:58587383-58587402 Msa0690720:intron 35.0%
CTTGGGACCGAAAATTATAA+AGG + chr4_4:58587519-58587538 Msa0690720:intron 35.0%
!!! TTTTTTACATTGGCCCAAGT+CGG + chr4_4:58587588-58587607 Msa0690720:intron 35.0%
! GCCCAAATTATATGACGTTT+TGG + chr4_4:58587771-58587790 Msa0690720:intron 35.0%
GACTTATAATTTGAGGACAG+AGG + chr4_4:58588020-58588039 Msa0690720:intron 35.0%
AGGGAGTAATAAGGAATAGA+GGG + chr4_4:58588349-58588368 Msa0690720:intron 35.0%
CAAGCACATAACCTAACTTA+TGG + chr4_4:58588552-58588571 Msa0690720:intron 35.0%
TTCAATGAGCATGTGAATCT+AGG + chr4_4:58588592-58588611 Msa0690720:intron 35.0%
TAGTCATGTTGCCCAAAATA+CGG + chr4_4:58589328-58589347 Msa0690720:intron 35.0%
AAAAGGGAACACACAATTCA+TGG - chr4_4:58589368-58589387 None:intergenic 35.0%
!! TAGGGCATTAAAGTGTGTTT+TGG - chr4_4:58589449-58589468 None:intergenic 35.0%
AAACACACTTTAATGCCCTA+TGG + chr4_4:58589449-58589468 Msa0690720:intron 35.0%
TACGTGATGATTAGGTGAAA+AGG - chr4_4:58589527-58589546 None:intergenic 35.0%
ACAGGAAATGTTCTTCTCAA+TGG + chr4_4:58589783-58589802 Msa0690720:CDS 35.0%
CAGGAAATGTTCTTCTCAAT+GGG + chr4_4:58589784-58589803 Msa0690720:CDS 35.0%
AATGGGAAGAAAAAAACTCC+AGG + chr4_4:58589801-58589820 Msa0690720:CDS 35.0%
AAGAAAAAAACTCCAGGCTA+TGG + chr4_4:58589807-58589826 Msa0690720:CDS 35.0%
TCTTCTTTGGACATTGTTGA+TGG - chr4_4:58590007-58590026 None:intergenic 35.0%
ATGTCCAAAGAAGAAATCAG+CGG + chr4_4:58590013-58590032 Msa0690720:CDS 35.0%
CAGATAGGTTAATAGGTAAC+TGG + chr4_4:58590080-58590099 Msa0690720:CDS 35.0%
! AGTGGCGAAACTGTTTATTT+TGG + chr4_4:58590340-58590359 Msa0690720:CDS 35.0%
AAGTCCTTCTCAAAATGTGA+GGG - chr4_4:58590464-58590483 None:intergenic 35.0%
! GATTTCTTTTACGTGGACAA+GGG - chr4_4:58590686-58590705 None:intergenic 35.0%
! TCAGAAGGATTTCTTTTACG+TGG - chr4_4:58590693-58590712 None:intergenic 35.0%
CATCTTAGGAAATGATCAGA+AGG - chr4_4:58590708-58590727 None:intergenic 35.0%
AGTCAGAATTGATGCATCTT+AGG - chr4_4:58590722-58590741 None:intergenic 35.0%
TTCTGACTTTGACGTTGTAA+CGG + chr4_4:58590734-58590753 Msa0690720:CDS 35.0%
TCTTGCAAAAGATCCTAAGT+AGG - chr4_4:58590854-58590873 None:intergenic 35.0%
TCAATATCGTGTAAGACCTA+AGG - chr4_4:58591088-58591107 None:intergenic 35.0%
TGAACAAACACCTATTGACA+TGG + chr4_4:58591105-58591124 Msa0690720:intron 35.0%
!!! TCACTTTTTTCCCCCTTATT+AGG + chr4_4:58591139-58591158 Msa0690720:intron 35.0%
! TTTGGAACATCCTAATAAGG+GGG - chr4_4:58591152-58591171 None:intergenic 35.0%
ATGAAAGGATCTGCTGAATT+TGG - chr4_4:58591170-58591189 None:intergenic 35.0%
AGCAGATCCTTTCATGAATT+TGG + chr4_4:58591175-58591194 Msa0690720:CDS 35.0%
! AATCTTGTCTTTTACCCTTC+TGG - chr4_4:58591255-58591274 None:intergenic 35.0%
! TTTTCTGTCAGTATAGTAGC+CGG + chr4_4:58591376-58591395 Msa0690720:intron 35.0%
AATATTATGAAGGACCGACA+AGG - chr4_4:58591411-58591430 None:intergenic 35.0%
CTTGAAACTGAGATAAACCT+TGG + chr4_4:58591465-58591484 Msa0690720:CDS 35.0%
ATGACTTTCATGTCAATTGG+AGG + chr4_4:58591693-58591712 Msa0690720:CDS 35.0%
! ACGCTATCCTTGAGATTTTA+TGG - chr4_4:58591972-58591991 None:intergenic 35.0%
AAAATCTCAAGGATAGCGTA+TGG + chr4_4:58591973-58591992 Msa0690720:intron 35.0%
TATACTAGTGCTTATGGCAT+CGG - chr4_4:58592101-58592120 None:intergenic 35.0%
TTTCTCATGGGAATCATTAC+AGG + chr4_4:58592584-58592603 Msa0690720:CDS 35.0%
ATATATCAGTTACGGTGCAT+GGG + chr4_4:58592784-58592803 Msa0690720:CDS 35.0%
! TGTATGTTTAGTTCGACTCT+TGG - chr4_4:58593089-58593108 None:intergenic 35.0%
CCTAACAAATTCAGTTCTTC+CGG - chr4_4:58593122-58593141 None:intergenic 35.0%
!! CAAGTATGGACTTGTTACTA+GGG - chr4_4:58593168-58593187 None:intergenic 35.0%
!! TCAAGTATGGACTTGTTACT+AGG - chr4_4:58593169-58593188 None:intergenic 35.0%
TATGTTCCTAGAAGTCGATT+TGG + chr4_4:58593415-58593434 Msa0690720:intron 35.0%
! AAATCTCCAAATCGACTTCT+AGG - chr4_4:58593424-58593443 None:intergenic 35.0%
!! TCATACAAGAATGACTTGCT+TGG + chr4_4:58593731-58593750 Msa0690720:CDS 35.0%
! CATATTCTCCTGTCAGTTTT+GGG - chr4_4:58593787-58593806 None:intergenic 35.0%
! ACATATTCTCCTGTCAGTTT+TGG - chr4_4:58593788-58593807 None:intergenic 35.0%
TTGAATTAAGCCATTCCAAG+TGG + chr4_4:58593828-58593847 Msa0690720:CDS 35.0%
TTGAGAAAAGACCTTCTTTC+AGG + chr4_4:58593978-58593997 Msa0690720:CDS 35.0%
TGAGAAGATAGTGAATGAAG+GGG - chr4_4:58594040-58594059 None:intergenic 35.0%
CTTGAGAAGATAGTGAATGA+AGG - chr4_4:58594042-58594061 None:intergenic 35.0%
TCATTCACTATCTTCTCAAG+AGG + chr4_4:58594042-58594061 Msa0690720:CDS 35.0%
CATTCACTATCTTCTCAAGA+GGG + chr4_4:58594043-58594062 Msa0690720:CDS 35.0%
!! CGTAATTGTTTTTCTAGGTG+TGG - chr4_4:58594084-58594103 None:intergenic 35.0%
TGGAACATTATTTGTGTCCT+TGG + chr4_4:58594266-58594285 Msa0690720:three_prime_UTR 35.0%
!! CATTAGGTTAGAGCTTTGTT+TGG + chr4_4:58594367-58594386 Msa0690720:three_prime_UTR 35.0%
GAGAGAGAGAGAGAAAAGAT+GGG - chr4_4:58585813-58585832 None:intergenic 40.0%
AGAGAGAGAGAGAGAAAAGA+TGG - chr4_4:58585814-58585833 None:intergenic 40.0%
CAACAACAAAGGATGCAACA+TGG + chr4_4:58586035-58586054 Msa0690720:CDS 40.0%
ATAGAGGAAGCTTCTTAGCA+TGG + chr4_4:58586088-58586107 Msa0690720:CDS 40.0%
TAGAGGAAGCTTCTTAGCAT+GGG + chr4_4:58586089-58586108 Msa0690720:CDS 40.0%
GTTGGTCCTTTCCCAAAATT+TGG - chr4_4:58586135-58586154 None:intergenic 40.0%
TTGGGAAAGGACCAACTAAA+AGG + chr4_4:58586139-58586158 Msa0690720:CDS 40.0%
TGCAAGTGTATCAAGCAAAG+TGG - chr4_4:58586241-58586260 None:intergenic 40.0%
ACTTTGCTTGATACACTTGC+AGG + chr4_4:58586240-58586259 Msa0690720:CDS 40.0%
! TCCCTTTTGAGCTTTCTTTC+TGG + chr4_4:58586525-58586544 Msa0690720:intron 40.0%
CCCAGAAAGAAAGCTCAAAA+GGG - chr4_4:58586529-58586548 None:intergenic 40.0%
! CCCTTTTGAGCTTTCTTTCT+GGG + chr4_4:58586526-58586545 Msa0690720:intron 40.0%
TCCCAGAAAGAAAGCTCAAA+AGG - chr4_4:58586530-58586549 None:intergenic 40.0%
CAGACCAAGCCATTAAAACA+AGG - chr4_4:58586664-58586683 None:intergenic 40.0%
!!! TGTTTTAATGGCTTGGTCTG+TGG + chr4_4:58586664-58586683 Msa0690720:intron 40.0%
!! TTGACAGAATTGGTTCTGGA+TGG - chr4_4:58586738-58586757 None:intergenic 40.0%
! TGACTTGACAGAATTGGTTC+TGG - chr4_4:58586742-58586761 None:intergenic 40.0%
! GTATAGTGGAAAGGTCACTA+AGG - chr4_4:58586882-58586901 None:intergenic 40.0%
CTATATTAAAGGATGGAGGG+AGG - chr4_4:58587106-58587125 None:intergenic 40.0%
CTCCCTCCATCCTTTAATAT+AGG + chr4_4:58587104-58587123 Msa0690720:intron 40.0%
CACTGCAACGTAATTCTAAG+AGG - chr4_4:58587336-58587355 None:intergenic 40.0%
AATTACGTTGCAGTGAACCT+TGG + chr4_4:58587341-58587360 Msa0690720:intron 40.0%
ATTACGTTGCAGTGAACCTT+GGG + chr4_4:58587342-58587361 Msa0690720:intron 40.0%
CTAATTTACGTTGAGTCCCA+AGG - chr4_4:58587361-58587380 None:intergenic 40.0%
! TTTTTACATTGGCCCAAGTC+GGG + chr4_4:58587589-58587608 Msa0690720:intron 40.0%
GGGAAATACACATCTTAGCA+TGG - chr4_4:58588221-58588240 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr4_4:58588329-58588348 Msa0690720:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr4_4:58588330-58588349 Msa0690720:intron 40.0%
CTATTCCTTATTACTCCCTC+CGG - chr4_4:58588348-58588367 None:intergenic 40.0%
GAGGGAGTAATAAGGAATAG+AGG + chr4_4:58588348-58588367 Msa0690720:intron 40.0%
GGGAGTAATAAGGAATAGAG+GGG + chr4_4:58588350-58588369 Msa0690720:intron 40.0%
TGTAGAGTTGGGTAACAAAG+TGG + chr4_4:58588392-58588411 Msa0690720:intron 40.0%
AATGGCAGCTGTCAAAGATT+TGG - chr4_4:58588452-58588471 None:intergenic 40.0%
TAATCCAGAGTTTGACAACG+AGG - chr4_4:58589024-58589043 None:intergenic 40.0%
CTTACAACAAAACCATAGCC+TGG - chr4_4:58589822-58589841 None:intergenic 40.0%
! ACGCAAGAAGATGTGTTGTT+AGG + chr4_4:58589932-58589951 Msa0690720:CDS 40.0%
!! TAAGCCGCTGATTTCTTCTT+TGG - chr4_4:58590020-58590039 None:intergenic 40.0%
TTAACCTATCTGCACAGTCA+TGG - chr4_4:58590072-58590091 None:intergenic 40.0%
GACTGTGCAGATAGGTTAAT+AGG + chr4_4:58590073-58590092 Msa0690720:CDS 40.0%
ATAGGTAACTGGCATTTGAG+AGG + chr4_4:58590091-58590110 Msa0690720:CDS 40.0%
! TGGCATTTGAGAGGTATAAG+TGG + chr4_4:58590100-58590119 Msa0690720:CDS 40.0%
! CATTTGAGAGGTATAAGTGG+TGG + chr4_4:58590103-58590122 Msa0690720:CDS 40.0%
TTGCACTTGAGATTCTCACA+AGG + chr4_4:58590146-58590165 Msa0690720:CDS 40.0%
CTTAGAAATTGTGCTCGTGA+TGG + chr4_4:58590241-58590260 Msa0690720:CDS 40.0%
! GATCTTTTCTTGCTCTCTAG+TGG + chr4_4:58590322-58590341 Msa0690720:CDS 40.0%
TGAAGCTAAAATGGCAATCG+AGG + chr4_4:58590363-58590382 Msa0690720:CDS 40.0%
!! GATACCCTCACATTTTGAGA+AGG + chr4_4:58590457-58590476 Msa0690720:intron 40.0%
CAAGTCCTTCTCAAAATGTG+AGG - chr4_4:58590465-58590484 None:intergenic 40.0%
! GGATTTCTTTTACGTGGACA+AGG - chr4_4:58590687-58590706 None:intergenic 40.0%
GCTGTAGCCAAATTCATGAA+AGG - chr4_4:58591185-58591204 None:intergenic 40.0%
TTATCCTAAGGATTTCGGCT+TGG - chr4_4:58591353-58591372 None:intergenic 40.0%
AGCAACTCAAAACACTGACA+AGG + chr4_4:58591508-58591527 Msa0690720:CDS 40.0%
GTGAACATGTGTAGAGATGT+TGG + chr4_4:58591540-58591559 Msa0690720:CDS 40.0%
! GTAGAGATGTTGGTTACTAC+TGG + chr4_4:58591550-58591569 Msa0690720:CDS 40.0%
TCCTGATATAAATGCACCAC+AGG - chr4_4:58591670-58591689 None:intergenic 40.0%
! CTTATGGCATCGGATTTGTT+CGG - chr4_4:58592091-58592110 None:intergenic 40.0%
TCTTTCATCATTCCCGTTCT+TGG + chr4_4:58592409-58592428 Msa0690720:CDS 40.0%
AGAGCAATAGCAACCAAGAA+CGG - chr4_4:58592425-58592444 None:intergenic 40.0%
AACGCATAGTGAATGAATCC+TGG - chr4_4:58592488-58592507 None:intergenic 40.0%
AGTGATTGAGAGTCTCATGA+TGG + chr4_4:58592538-58592557 Msa0690720:CDS 40.0%
TGATGACCTCTGGATTCTTT+AGG + chr4_4:58592717-58592736 Msa0690720:CDS 40.0%
TAGCAACCTAAAGAATCCAG+AGG - chr4_4:58592726-58592745 None:intergenic 40.0%
CTGATCTTCCAAAACCTGTT+TGG + chr4_4:58592747-58592766 Msa0690720:CDS 40.0%
CATATATCAGTTACGGTGCA+TGG + chr4_4:58592783-58592802 Msa0690720:CDS 40.0%
TTCTCGTTGATACCAAGTGT+CGG + chr4_4:58592819-58592838 Msa0690720:intron 40.0%
! ATGTTTAGTTCGACTCTTGG+AGG - chr4_4:58593086-58593105 None:intergenic 40.0%
! CCGGAAGAACTGAATTTGTT+AGG + chr4_4:58593119-58593138 Msa0690720:intron 40.0%
!! TGACACATAAGCACTGATGT+TGG - chr4_4:58593650-58593669 None:intergenic 40.0%
TTATGTGTCAGTGTCATGTC+CGG + chr4_4:58593660-58593679 Msa0690720:intron 40.0%
ATTGAGATGGACACTAACAC+CGG - chr4_4:58593682-58593701 None:intergenic 40.0%
AATTAAGCCATTCCAAGTGG+TGG + chr4_4:58593831-58593850 Msa0690720:CDS 40.0%
ATTAAGCCATTCCAAGTGGT+GGG + chr4_4:58593832-58593851 Msa0690720:CDS 40.0%
TCCTCCTTCTCTTATGTTAC+AGG + chr4_4:58593870-58593889 Msa0690720:CDS 40.0%
TCCTGTAACATAAGAGAAGG+AGG - chr4_4:58593874-58593893 None:intergenic 40.0%
! AAGCTGCTGTATGGTTCTTT+TGG - chr4_4:58593960-58593979 None:intergenic 40.0%
! TCTTTTCTCAAGCTGCTGTA+TGG - chr4_4:58593969-58593988 None:intergenic 40.0%
! GATGGCATTTTCCTGAAAGA+AGG - chr4_4:58593992-58594011 None:intergenic 40.0%
!! TTGTTTTTCTAGGTGTGGAG+TGG - chr4_4:58594079-58594098 None:intergenic 40.0%
AACCTAATGCTGATAAGGCT+AGG - chr4_4:58594356-58594375 None:intergenic 40.0%
GCTCTAACCTAATGCTGATA+AGG - chr4_4:58594361-58594380 None:intergenic 40.0%
ATGGAGATTGAAGCAGCAAG+TGG + chr4_4:58586009-58586028 Msa0690720:CDS 45.0%
GCAAGTGGTAGCAACAACAA+AGG + chr4_4:58586024-58586043 Msa0690720:CDS 45.0%
! GAGAGTGAGGAAGCATATTG+TGG + chr4_4:58586060-58586079 Msa0690720:CDS 45.0%
!! CTAAATGGTTTTGCTGAGCC+TGG + chr4_4:58586174-58586193 Msa0690720:CDS 45.0%
ATGGCTATTATGGGTCCTTC+TGG + chr4_4:58586204-58586223 Msa0690720:CDS 45.0%
ACTCTGGTGACACTAACCTA+AGG + chr4_4:58586636-58586655 Msa0690720:intron 45.0%
CTCTGGTGACACTAACCTAA+GGG + chr4_4:58586637-58586656 Msa0690720:intron 45.0%
CCATTAAAACAAGGGCCCTT+AGG - chr4_4:58586655-58586674 None:intergenic 45.0%
!!! CCTAAGGGCCCTTGTTTTAA+TGG + chr4_4:58586652-58586671 Msa0690720:intron 45.0%
!! TTTAATGGCTTGGTCTGTGG+TGG + chr4_4:58586667-58586686 Msa0690720:intron 45.0%
!! TTAATGGCTTGGTCTGTGGT+GGG + chr4_4:58586668-58586687 Msa0690720:intron 45.0%
! AATTTGTTCGGTCCCGACTT+GGG - chr4_4:58587604-58587623 None:intergenic 45.0%
! AAATTTGTTCGGTCCCGACT+TGG - chr4_4:58587605-58587624 None:intergenic 45.0%
! ATAAGGAATAGAGGGGTGCA+TGG + chr4_4:58588357-58588376 Msa0690720:intron 45.0%
AGAGTTGGGTAACAAAGTGG+CGG + chr4_4:58588395-58588414 Msa0690720:intron 45.0%
GGTGGTTGGAATTGTGAGAT+TGG + chr4_4:58588518-58588537 Msa0690720:intron 45.0%
CTTACCTCGTTGTCAAACTC+TGG + chr4_4:58589017-58589036 Msa0690720:intron 45.0%
TTGAGATTCTCACAAGGCCT+CGG + chr4_4:58590152-58590171 Msa0690720:CDS 45.0%
TCATCAAGGAACAGTAACCG+AGG - chr4_4:58590172-58590191 None:intergenic 45.0%
TTCCTTGATGAACCGACTAG+TGG + chr4_4:58590181-58590200 Msa0690720:CDS 45.0%
! AACCACTAGTCGGTTCATCA+AGG - chr4_4:58590186-58590205 None:intergenic 45.0%
TGATGAACCGACTAGTGGTT+TGG + chr4_4:58590186-58590205 Msa0690720:CDS 45.0%
! GAAATTGTGCTCGTGATGGA+AGG + chr4_4:58590245-58590264 Msa0690720:CDS 45.0%
AGTGCAAAGACTTCACTGCT+AGG - chr4_4:58590295-58590314 None:intergenic 45.0%
!!! GTGCAGTTTTTTGCTGAAGC+CGG + chr4_4:58590657-58590676 Msa0690720:intron 45.0%
TTTACGTGGACAAGGGAAAC+CGG - chr4_4:58590679-58590698 None:intergenic 45.0%
GTTGTAACGGCTACACTGAA+GGG + chr4_4:58590747-58590766 Msa0690720:CDS 45.0%
CTACACTGAAGGGATCTCAA+AGG + chr4_4:58590757-58590776 Msa0690720:CDS 45.0%
TATGCCAAGCCGAAATCCTT+AGG + chr4_4:58591346-58591365 Msa0690720:intron 45.0%
! ATGTTGGTTACTACTGGCTG+AGG + chr4_4:58591556-58591575 Msa0690720:CDS 45.0%
GCCTGTGGTGCATTTATATC+AGG + chr4_4:58591666-58591685 Msa0690720:CDS 45.0%
GAGCAATAGCAACCAAGAAC+GGG - chr4_4:58592424-58592443 None:intergenic 45.0%
AACATGGTGAAATTCAGGCC+AGG + chr4_4:58592467-58592486 Msa0690720:CDS 45.0%
ATGGGAATCATTACAGGAGC+TGG + chr4_4:58592590-58592609 Msa0690720:CDS 45.0%
ACGCATGTGGATCATGTAGT+TGG - chr4_4:58592655-58592674 None:intergenic 45.0%
! GGAATCATGATGATGACCTC+TGG + chr4_4:58592707-58592726 Msa0690720:CDS 45.0%
GAAATTGGATAGCGCCAAAC+AGG - chr4_4:58592764-58592783 None:intergenic 45.0%
!! GTTGATACCAAGTGTCGGTT+TGG + chr4_4:58592824-58592843 Msa0690720:intron 45.0%
CACAAAACCAAACCGACACT+TGG - chr4_4:58592834-58592853 None:intergenic 45.0%
!!! CAAGTGTCGGTTTGGTTTTG+TGG + chr4_4:58592832-58592851 Msa0690720:intron 45.0%
!!! CTGTCAGTTTTGGGTTACCT+GGG - chr4_4:58593778-58593797 None:intergenic 45.0%
TGCCATCTGTTACTACTTCC+AGG + chr4_4:58594005-58594024 Msa0690720:CDS 45.0%
CTCCTGGAAGTAGTAACAGA+TGG - chr4_4:58594010-58594029 None:intergenic 45.0%
CATCTGTTACTACTTCCAGG+AGG + chr4_4:58594008-58594027 Msa0690720:CDS 45.0%
!! GTCCTAGCCTTATCAGCATT+AGG + chr4_4:58594351-58594370 Msa0690720:three_prime_UTR 45.0%
!!! ATAATAAGATAATAATTTTT+CGG - chr4_4:58587551-58587570 None:intergenic 5.0%
ATGCAACATGGACGAGAGTG+AGG + chr4_4:58586047-58586066 Msa0690720:CDS 50.0%
TGCTGAGCCTGGTAGAATCA+TGG + chr4_4:58586185-58586204 Msa0690720:CDS 50.0%
!! ATTATGGGTCCTTCTGGCTC+TGG + chr4_4:58586210-58586229 Msa0690720:CDS 50.0%
! GTGGATTTTCCAGAGCCAGA+AGG - chr4_4:58586222-58586241 None:intergenic 50.0%
!!! GGGCCCTTGTTTTAATGGCT+TGG + chr4_4:58586657-58586676 Msa0690720:intron 50.0%
!! TAATGGCTTGGTCTGTGGTG+GGG + chr4_4:58586669-58586688 Msa0690720:intron 50.0%
AGTGACCGGAGGGAGTAATA+AGG + chr4_4:58588340-58588359 Msa0690720:intron 50.0%
AAAAACCATGGTCCCCAGCA+CGG - chr4_4:58589476-58589495 None:intergenic 50.0%
GTCTCCATGACTGTGCAGAT+AGG + chr4_4:58590065-58590084 Msa0690720:CDS 50.0%
! GAGGTATAAGTGGTGGCGAA+AGG + chr4_4:58590110-58590129 Msa0690720:CDS 50.0%
GCACTGTCCAAACCACTAGT+CGG - chr4_4:58590196-58590215 None:intergenic 50.0%
CGTTGTAACGGCTACACTGA+AGG + chr4_4:58590746-58590765 Msa0690720:CDS 50.0%
AGCGTTCAACGTATGCCAGA+AGG + chr4_4:58591237-58591256 Msa0690720:CDS 50.0%
GCGTTCAACGTATGCCAGAA+GGG + chr4_4:58591238-58591257 Msa0690720:CDS 50.0%
ATGAAGGACCGACAAGGACA+CGG - chr4_4:58591405-58591424 None:intergenic 50.0%
ACCTTGGAAGCCAAGCTAGT+TGG + chr4_4:58591481-58591500 Msa0690720:CDS 50.0%
! ACCAACTAGCTTGGCTTCCA+AGG - chr4_4:58591485-58591504 None:intergenic 50.0%
TTGGAAGCCAAGCTAGTTGG+TGG + chr4_4:58591484-58591503 Msa0690720:CDS 50.0%
GTTGCTTCCACCAACTAGCT+TGG - chr4_4:58591494-58591513 None:intergenic 50.0%
CTACGGCTACACTTCCATCT+TGG + chr4_4:58591635-58591654 Msa0690720:CDS 50.0%
! TACACTTCCATCTTGGCTCG+TGG + chr4_4:58591642-58591661 Msa0690720:CDS 50.0%
! GGATAGCGCCAAACAGGTTT+TGG - chr4_4:58592758-58592777 None:intergenic 50.0%
GAGTTTGATCCACTACTCCC+AGG + chr4_4:58593758-58593777 Msa0690720:CDS 50.0%
! TTTGGGTTACCTGGGAGTAG+TGG - chr4_4:58593770-58593789 None:intergenic 50.0%
!!! CCTGTCAGTTTTGGGTTACC+TGG - chr4_4:58593779-58593798 None:intergenic 50.0%
CCAGGTAACCCAAAACTGAC+AGG + chr4_4:58593776-58593795 Msa0690720:CDS 50.0%
AAAACCATGGTCCCCAGCAC+GGG - chr4_4:58589475-58589494 None:intergenic 55.0%
TTACGGTGCATGGGCGATAC+AGG + chr4_4:58592793-58592812 Msa0690720:CDS 55.0%
CCAAGTCCCACCACTTGGAA+TGG - chr4_4:58593841-58593860 None:intergenic 55.0%
! CCATTCCAAGTGGTGGGACT+TGG + chr4_4:58593838-58593857 Msa0690720:CDS 55.0%
!! ATGAAGGGGTTGATGCCTCC+TGG - chr4_4:58594026-58594045 None:intergenic 55.0%
TAATGCCCTATGGCCCGTGC+TGG + chr4_4:58589459-58589478 Msa0690720:intron 60.0%
AATGCCCTATGGCCCGTGCT+GGG + chr4_4:58589460-58589479 Msa0690720:intron 60.0%
ACCGACAAGGACACGGACAC+CGG - chr4_4:58591398-58591417 None:intergenic 60.0%
ACAGGCACCACGAGCCAAGA+TGG - chr4_4:58591652-58591671 None:intergenic 60.0%
! ATCTTGGCTCGTGGTGCCTG+TGG + chr4_4:58591651-58591670 Msa0690720:CDS 60.0%
TGCTGCCAAGTCCCACCACT+TGG - chr4_4:58593846-58593865 None:intergenic 60.0%
ATGCCCTATGGCCCGTGCTG+GGG + chr4_4:58589461-58589480 Msa0690720:intron 65.0%
GCCGGTGTCCGTGTCCTTGT+CGG + chr4_4:58591394-58591413 Msa0690720:intron 65.0%
GGTCCCCAGCACGGGCCATA+GGG - chr4_4:58589467-58589486 None:intergenic 70.0%
TGGTCCCCAGCACGGGCCAT+AGG - chr4_4:58589468-58589487 None:intergenic 70.0%
ATGGCCCGTGCTGGGGACCA+TGG + chr4_4:58589468-58589487 Msa0690720:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 58585778 58594431 58585778 ID=Msa0690720;Name=Msa0690720
chr4_4 mRNA 58585778 58594431 58585778 ID=Msa0690720-mRNA-1;Parent=Msa0690720;Name=Msa0690720-mRNA-1;_AED=0.07;_eAED=0.07;_QI=231|1|1|1|1|1|9|341|692
chr4_4 exon 58585778 58586261 58585778 ID=Msa0690720-mRNA-1:exon:15757;Parent=Msa0690720-mRNA-1
chr4_4 exon 58589757 58589836 58589757 ID=Msa0690720-mRNA-1:exon:15758;Parent=Msa0690720-mRNA-1
chr4_4 exon 58589923 58590384 58589923 ID=Msa0690720-mRNA-1:exon:15759;Parent=Msa0690720-mRNA-1
chr4_4 exon 58590663 58590785 58590663 ID=Msa0690720-mRNA-1:exon:15760;Parent=Msa0690720-mRNA-1
chr4_4 exon 58591161 58591292 58591161 ID=Msa0690720-mRNA-1:exon:15761;Parent=Msa0690720-mRNA-1
chr4_4 exon 58591459 58591743 58591459 ID=Msa0690720-mRNA-1:exon:15762;Parent=Msa0690720-mRNA-1
chr4_4 exon 58592347 58592619 58592347 ID=Msa0690720-mRNA-1:exon:15763;Parent=Msa0690720-mRNA-1
chr4_4 exon 58592707 58592814 58592707 ID=Msa0690720-mRNA-1:exon:15764;Parent=Msa0690720-mRNA-1
chr4_4 exon 58593728 58594431 58593728 ID=Msa0690720-mRNA-1:exon:15765;Parent=Msa0690720-mRNA-1
chr4_4 five_prime_UTR 58585778 58586008 58585778 ID=Msa0690720-mRNA-1:five_prime_utr;Parent=Msa0690720-mRNA-1
chr4_4 CDS 58586009 58586261 58586009 ID=Msa0690720-mRNA-1:cds;Parent=Msa0690720-mRNA-1
chr4_4 CDS 58589757 58589836 58589757 ID=Msa0690720-mRNA-1:cds;Parent=Msa0690720-mRNA-1
chr4_4 CDS 58589923 58590384 58589923 ID=Msa0690720-mRNA-1:cds;Parent=Msa0690720-mRNA-1
chr4_4 CDS 58590663 58590785 58590663 ID=Msa0690720-mRNA-1:cds;Parent=Msa0690720-mRNA-1
chr4_4 CDS 58591161 58591292 58591161 ID=Msa0690720-mRNA-1:cds;Parent=Msa0690720-mRNA-1
chr4_4 CDS 58591459 58591743 58591459 ID=Msa0690720-mRNA-1:cds;Parent=Msa0690720-mRNA-1
chr4_4 CDS 58592347 58592619 58592347 ID=Msa0690720-mRNA-1:cds;Parent=Msa0690720-mRNA-1
chr4_4 CDS 58592707 58592814 58592707 ID=Msa0690720-mRNA-1:cds;Parent=Msa0690720-mRNA-1
chr4_4 CDS 58593728 58594090 58593728 ID=Msa0690720-mRNA-1:cds;Parent=Msa0690720-mRNA-1
chr4_4 three_prime_UTR 58594091 58594431 58594091 ID=Msa0690720-mRNA-1:three_prime_utr;Parent=Msa0690720-mRNA-1
Gene Sequence

>Msa0690720

ATGGAGATTGAAGCAGCAAGTGGTAGCAACAACAAAGGATGCAACATGGACGAGAGTGAGGAAGCATATTGTGGTCTTAATAGAGGAAGCTTCTTAGCATGGGAAGATCTAAGAGTTATGTTGCCAAATTTTGGGAAAGGACCAACTAAAAGGTTGCTTAATGGACTAAATGGTTTTGCTGAGCCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACTTTGCTTGATACACTTGCAGGTAGACTTGCAAAAAATGTTGTAATGACAGGAAATGTTCTTCTCAATGGGAAGAAAAAAACTCCAGGCTATGGTTTTGTTGCATACGTAACGCAAGAAGATGTGTTGTTAGGAACTCTTACAGTGAAAGAAACGATAACATATTCAGCACATTTACGTCTTCCATCAACAATGTCCAAAGAAGAAATCAGCGGCTTAGTTGATGCAACAATCATTGAAATGGGTCTCCATGACTGTGCAGATAGGTTAATAGGTAACTGGCATTTGAGAGGTATAAGTGGTGGCGAAAGGAAAAGAACTAGCATTGCACTTGAGATTCTCACAAGGCCTCGGTTACTGTTCCTTGATGAACCGACTAGTGGTTTGGACAGTGCATCTGCATTTTTTGTTGTTCAAACTCTTAGAAATTGTGCTCGTGATGGAAGGACTGTTATTTCTTCTATTCATCAGCCTAGCAGTGAAGTCTTTGCACTTTTTGATGATCTTTTCTTGCTCTCTAGTGGCGAAACTGTTTATTTTGGTGAAGCTAAAATGGCAATCGAGTTTTTTGCTGAAGCCGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCATTTCCTAAGATGCATCAATTCTGACTTTGACGTTGTAACGGCTACACTGAAGGGATCTCAAAGGATTCCTGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCACAAATTAAGTCGATGCTAGTTGAGAGATTTAAGCGTTCAACGTATGCCAGAAGGGTAAAAGACAAGATTCAAGAACAATCAACCAATGAAGGGCTTGAAACTGAGATAAACCTTGGAAGCCAAGCTAGTTGGTGGAAGCAACTCAAAACACTGACAAGGAGATCATTTGTGAACATGTGTAGAGATGTTGGTTACTACTGGCTGAGGATTATTATCTATATCATTGTATCTATATGTGTTGGAACTATCTATTTTGATATTGGCTACGGCTACACTTCCATCTTGGCTCGTGGTGCCTGTGGTGCATTTATATCAGGATTTATGACTTTCATGTCAATTGGAGGCTTTCCATCTTTTATTGAAGAAATGAAGGTATTTTATAGAGAAAGAATGAATGGATATTATGGTGTAGCAGCATTTATTTTATCAAACTTTCTTTCATCATTCCCGTTCTTGGTTGCTATTGCTCTTACTTCTTGCACAATCACATATAACATGGTGAAATTCAGGCCAGGATTCATTCACTATGCGTTTTTCACTGTTAACATCTATGGATGCATCTCAGTGATTGAGAGTCTCATGATGGTTGTAGCTGCACTTGTTCCAAATTTTCTCATGGGAATCATTACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTTAGGTTGCTATCTGATCTTCCAAAACCTGTTTGGCGCTATCCAATTTCATATATCAGTTACGGTGCATGGGCGATACAGGGTTCATACAAGAATGACTTGCTTGGTCTTGAGTTTGATCCACTACTCCCAGGTAACCCAAAACTGACAGGAGAATATGTGATAACACACATGTTAGGGATTGAATTAAGCCATTCCAAGTGGTGGGACTTGGCAGCACTTTTCCTCCTTCTCTTATGTTACAGGATATTGTTTTTTGTTGTTCTCAAGTTCAAGGAAAGAGCATCACCATTATATAGAAAACTTACTGCCAAAAGAACCATACAGCAGCTTGAGAAAAGACCTTCTTTCAGGAAAATGCCATCTGTTACTACTTCCAGGAGGCATCAACCCCTTCATTCACTATCTTCTCAAGAGGGTCTTGATTCTCCACTCCACACCTAG
Protein sequence

>Msa0690720

MEIEAASGSNNKGCNMDESEEAYCGLNRGSFLAWEDLRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGRLAKNVVMTGNVLLNGKKKTPGYGFVAYVTQEDVLLGTLTVKETITYSAHLRLPSTMSKEEISGLVDATIIEMGLHDCADRLIGNWHLRGISGGERKRTSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNCARDGRTVISSIHQPSSEVFALFDDLFLLSSGETVYFGEAKMAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIPDVPNSADPFMNLATAQIKSMLVERFKRSTYARRVKDKIQEQSTNEGLETEINLGSQASWWKQLKTLTRRSFVNMCRDVGYYWLRIIIYIIVSICVGTIYFDIGYGYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERMNGYYGVAAFILSNFLSSFPFLVAIALTSCTITYNMVKFRPGFIHYAFFTVNIYGCISVIESLMMVVAALVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFDPLLPGNPKLTGEYVITHMLGIELSHSKWWDLAALFLLLLCYRILFFVVLKFKERASPLYRKLTAKRTIQQLEKRPSFRKMPSVTTSRRHQPLHSLSSQEGLDSPLHT*