AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1030430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1030430 MtrunA17_Chr7g0251451 96.970 297 7 2 1 295 1 297 0.0 590
Msa1030430 MtrunA17_Chr5g0409311 46.281 242 118 4 19 249 20 260 5.33e-71 221
Msa1030430 MtrunA17_Chr7g0270061 49.550 222 94 4 55 262 75 292 1.19e-69 218
Msa1030430 MtrunA17_Chr1g0194601 49.765 213 94 2 48 248 71 282 8.04e-69 216
Msa1030430 MtrunA17_Chr4g0038261 42.473 186 106 1 77 261 45 230 5.90e-53 173
Msa1030430 MtrunA17_Chr4g0034751 43.103 174 99 0 76 249 98 271 4.58e-46 156
Msa1030430 MtrunA17_Chr4g0056771 36.316 190 121 0 73 262 91 280 1.33e-38 137
Msa1030430 MtrunA17_Chr4g0055551 35.870 184 110 1 77 252 104 287 2.24e-28 110
Msa1030430 MtrunA17_Chr7g0272191 33.333 183 111 3 86 257 119 301 1.05e-27 109
Msa1030430 MtrunA17_Chr4g0015831 40.909 110 62 1 70 176 12 121 1.35e-26 101
Msa1030430 MtrunA17_CPg0492721 40.909 110 62 1 70 176 12 121 1.35e-26 101
Msa1030430 MtrunA17_Chr1g0207341 32.418 182 113 2 77 248 155 336 1.76e-25 104
Msa1030430 MtrunA17_Chr1g0184041 43.750 80 45 0 91 170 100 179 1.52e-19 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1030430 AT1G66670.1 67.434 304 85 4 1 293 1 301 5.56e-143 405
Msa1030430 AT5G45390.1 53.403 191 89 0 75 265 77 267 1.79e-70 220
Msa1030430 AT1G02560.1 50.000 212 93 2 49 248 75 285 5.94e-70 219
Msa1030430 AT5G23140.1 41.954 174 101 0 77 250 48 221 1.26e-52 172
Msa1030430 AT1G11750.1 42.529 174 100 0 76 249 95 268 5.36e-46 156
Msa1030430 AT1G11750.2 42.529 174 100 0 76 249 113 286 7.19e-46 156
Msa1030430 ATCG00670.1 42.775 173 98 1 76 247 21 193 3.92e-44 149
Msa1030430 AT1G12410.1 37.572 173 108 0 76 248 88 260 5.73e-40 141
Msa1030430 AT4G17040.1 36.111 180 107 1 77 248 105 284 2.31e-34 127
Msa1030430 AT1G09130.2 33.659 205 122 3 71 264 115 316 7.14e-32 121
Msa1030430 AT1G09130.1 33.659 205 122 3 71 264 115 316 7.14e-32 121
Msa1030430 AT1G09130.3 33.659 205 122 3 71 264 115 316 1.40e-31 121
Msa1030430 AT1G49970.1 34.184 196 111 3 64 249 166 353 8.62e-29 114

Find 88 sgRNAs with CRISPR-Local

Find 444 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTTGATTCTTCTCTTC+TGG 0.169736 7_1:-64483875 None:intergenic
AGTATCAAGCTCTTCGAATT+TGG 0.170892 7_1:-64484116 None:intergenic
AAACTCAGTTAAAGAATATA+TGG 0.230278 7_1:+64489396 Msa1030430:CDS
GTTCTTTGTTTGGTTGAAAA+TGG 0.236978 7_1:-64484004 None:intergenic
TCACCTCCAACAAGTATTAA+AGG 0.249669 7_1:+64489540 Msa1030430:three_prime_UTR
CCATATCCAACCTGCTCTTC+AGG 0.259693 7_1:-64489165 None:intergenic
CTGGTTTAGCTTCTTTGTTT+TGG 0.261033 7_1:-64483856 None:intergenic
AATAAACAACTTGATATCTT+TGG 0.296441 7_1:-64485247 None:intergenic
ATGGGAAAATATATTCATTA+AGG 0.299187 7_1:-64489659 None:intergenic
AAGCCATGGAGAAGCGGTTT+TGG 0.315920 7_1:-64484092 None:intergenic
GTATCAAGCTCTTCGAATTT+GGG 0.334666 7_1:-64484115 None:intergenic
AAAATCCCTTTAATACTTGT+TGG 0.361759 7_1:-64489546 None:intergenic
ATCTGCCTTGCATAACTTCA+TGG 0.362484 7_1:-64485861 None:intergenic
GTTTAACAATGTCTTCTTGT+TGG 0.365237 7_1:-64483951 None:intergenic
TGTCTTCTTGTTGGAGTTGA+AGG 0.365755 7_1:-64483942 None:intergenic
GACCCACTTTATCCTCTAAC+TGG 0.374521 7_1:+64484047 Msa1030430:CDS
AACGATTGTTGTTCTTTGTT+TGG 0.379018 7_1:-64484014 None:intergenic
TATTCTTGTGCAGATTGAAT+TGG 0.379902 7_1:+64489250 Msa1030430:intron
TCAACTGCTGTATGAGTTAT+GGG 0.385958 7_1:+64489470 Msa1030430:exon
CCTTGGACTTGCAGCATCCA+TGG 0.388620 7_1:+64485898 Msa1030430:CDS
TCATACAACCTCATGACATA+TGG 0.392685 7_1:-64489678 None:intergenic
ATCAACTGCTGTATGAGTTA+TGG 0.398508 7_1:+64489469 Msa1030430:exon
TTGTTGGAGTTGAAGGTTAG+TGG 0.402106 7_1:-64483935 None:intergenic
CCAAGAAAACAATTCTTTGA+CGG 0.426001 7_1:-64484153 None:intergenic
AAGATACTATCAAGAATTAC+AGG 0.430602 7_1:+64489138 Msa1030430:CDS
CATCAACCTCTCGGGTCTGC+TGG 0.435448 7_1:+64485989 Msa1030430:CDS
CACCTCCAACAAGTATTAAA+GGG 0.438792 7_1:+64489541 Msa1030430:three_prime_UTR
TGAATCATAACTCTGGAATT+CGG 0.444419 7_1:-64485968 None:intergenic
ATGGGAAACAAGCCAGTTAG+AGG 0.447565 7_1:-64484059 None:intergenic
TAATACTTGTTGGAGGTGAT+AGG 0.459060 7_1:-64489536 None:intergenic
GGTGCATTCCTCCTTGCTGC+TGG 0.463122 7_1:+64485920 Msa1030430:CDS
CCTGGTGGTTCTATTACTGC+TGG 0.464946 7_1:+64485276 Msa1030430:CDS
CCGTATTCTTTCGCTTCCCA+TGG 0.482110 7_1:-64489299 None:intergenic
CCTCCTTGCTGCTGGTACGA+AGG 0.484471 7_1:+64485928 Msa1030430:CDS
GCAGTTGATGTTTCCTCTGA+GGG 0.485396 7_1:-64489455 None:intergenic
ATCCCTTTAATACTTGTTGG+AGG 0.487836 7_1:-64489543 None:intergenic
GCAATTGGAGCAACTAGTCC+TGG 0.489167 7_1:-64489353 None:intergenic
CTTGGACTTGCAGCATCCAT+GGG 0.489173 7_1:+64485899 Msa1030430:CDS
CTCCTTGCTGCTGGTACGAA+GGG 0.490742 7_1:+64485929 Msa1030430:CDS
TACAGGAAAACCTGAAGAGC+AGG 0.500445 7_1:+64489155 Msa1030430:CDS
GGGAATTAGTTGCAGTGGTG+TGG 0.501092 7_1:-64489761 None:intergenic
GGTGGCGTTGCATCTGCAAT+TGG 0.501272 7_1:-64489368 None:intergenic
CCATGGGAAGCGAAAGAATA+CGG 0.506339 7_1:+64489299 Msa1030430:CDS
AACTCAGTTAAAGAATATAT+GGG 0.507439 7_1:+64489397 Msa1030430:CDS
CATACAACCTCATGACATAT+GGG 0.509000 7_1:-64489677 None:intergenic
GTTGATGATGTTATTGATGA+CGG 0.512156 7_1:+64489326 Msa1030430:CDS
GAAATTGAAGGAAACTCAAA+AGG 0.513901 7_1:+64489419 Msa1030430:CDS
CAACCTCTCGGGTCTGCTGG+TGG 0.514584 7_1:+64485992 Msa1030430:CDS
TGCTGCAAGTCCAAGGCAAA+CGG 0.520391 7_1:-64485891 None:intergenic
GTTATTGATGACGGAAAACC+AGG 0.520706 7_1:+64489335 Msa1030430:CDS
GGAAGCGAAAGAATACGGTT+TGG 0.522443 7_1:+64489304 Msa1030430:CDS
AAGAATATATGGGAAATTGA+AGG 0.523845 7_1:+64489407 Msa1030430:CDS
CTGCTGGTACGAAGGGGAAG+AGG 0.530379 7_1:+64485936 Msa1030430:CDS
GATGTGTCTACCGTTTGCCT+TGG 0.531095 7_1:+64485881 Msa1030430:CDS
AAGTTGTTTATTAATTCACC+TGG 0.542020 7_1:+64485258 Msa1030430:CDS
TTGAAAATGGAATTTGAGAG+TGG 0.542107 7_1:-64483991 None:intergenic
GTTATGATTCATCAACCTCT+CGG 0.542234 7_1:+64485980 Msa1030430:CDS
TTTGGTAACTACTAACCGAT+GGG 0.548290 7_1:-64483838 None:intergenic
TTATGATTCATCAACCTCTC+GGG 0.550146 7_1:+64485981 Msa1030430:CDS
AAGCCAGTTAGAGGATAAAG+TGG 0.554569 7_1:-64484050 None:intergenic
CTGCCAAAACCGCTTCTCCA+TGG 0.559788 7_1:+64484089 Msa1030430:CDS
CCATGGATGCTGCAAGTCCA+AGG 0.569431 7_1:-64485898 None:intergenic
TGGAGGGGAATTAGTTGCAG+TGG 0.572013 7_1:-64489766 None:intergenic
AGGTTGATGAATCATAACTC+TGG 0.580315 7_1:-64485975 None:intergenic
TCTTCGAATTTGGGAAGCCA+TGG 0.593022 7_1:-64484106 None:intergenic
TTGTTTATTAATTCACCTGG+TGG 0.596283 7_1:+64485261 Msa1030430:CDS
TGATGCCATGAAGTTATGCA+AGG 0.601132 7_1:+64485856 Msa1030430:CDS
TAGCAACGTGTAGGTGGTGT+GGG 0.601559 7_1:-64489737 None:intergenic
TTTGGGAAGCCATGGAGAAG+CGG 0.603684 7_1:-64484098 None:intergenic
AGCAAGGAGGAATGCACCCA+TGG 0.612929 7_1:-64485915 None:intergenic
TCCCCTTCGTACCAGCAGCA+AGG 0.615990 7_1:-64485931 None:intergenic
GGTTAGTGGCAAACATGTTG+AGG 0.619604 7_1:-64483921 None:intergenic
AACAACTTGATATCTTTGGT+AGG 0.619736 7_1:-64485243 None:intergenic
AGCAGTTGATGTTTCCTCTG+AGG 0.624058 7_1:-64489456 None:intergenic
TCTTTGACGGAGAAGCATGT+TGG 0.629753 7_1:-64484140 None:intergenic
TGGTGTGGTTAGCAACGTGT+AGG 0.632776 7_1:-64489746 None:intergenic
GATATATCAATTCTCTCGCA+CGG 0.638663 7_1:-64489098 None:intergenic
TGTGGTTAGCAACGTGTAGG+TGG 0.640059 7_1:-64489743 None:intergenic
TCCTTGCTGCTGGTACGAAG+GGG 0.642401 7_1:+64485930 Msa1030430:CDS
TGTGCAGATTGAATTGGACA+CGG 0.645326 7_1:+64489256 Msa1030430:intron
TATGAGTTATGGGACAAGCA+AGG 0.647243 7_1:+64489480 Msa1030430:exon
TTAGCAACGTGTAGGTGGTG+TGG 0.650470 7_1:-64489738 None:intergenic
TAAGAAGAAACTCCCCTCAG+AGG 0.665356 7_1:+64489442 Msa1030430:CDS
CCAGCAGTAATAGAACCACC+AGG 0.675297 7_1:-64485276 None:intergenic
CAGTTGATGTTTCCTCTGAG+GGG 0.678520 7_1:-64489454 None:intergenic
AGCCAGTTAGAGGATAAAGT+GGG 0.686070 7_1:-64484049 None:intergenic
CCTTCGTACCAGCAGCAAGG+AGG 0.704457 7_1:-64485928 None:intergenic
TTTCCACCAGCAGACCCGAG+AGG 0.727221 7_1:-64485995 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATAAAGTAAAATTAAAA+TGG - chr7_1:64489236-64489255 None:intergenic 10.0%
!!! ATAAAAGTGTGTTTTATTTA+CGG - chr7_1:64487245-64487264 None:intergenic 15.0%
!! TCTAAAAAATAATGATCAAA+TGG + chr7_1:64487392-64487411 Msa1030430:intron 15.0%
!!! TACTCATTTTATTTTATCAT+AGG - chr7_1:64487486-64487505 None:intergenic 15.0%
!!! GATTATTTTCCTTATTTAAA+TGG + chr7_1:64487559-64487578 Msa1030430:intron 15.0%
!! AAATAAAGCTTAATTGTTTA+AGG + chr7_1:64488403-64488422 Msa1030430:intron 15.0%
!! ATAAAGTAAAATTAAAATGG+TGG - chr7_1:64489233-64489252 None:intergenic 15.0%
!! AACATCAAAAAAAGACAAAA+GGG - chr7_1:64484223-64484242 None:intergenic 20.0%
!! AAACATCAAAAAAAGACAAA+AGG - chr7_1:64484224-64484243 None:intergenic 20.0%
!!! TCTTTTTTTGATGTTTTTGT+GGG + chr7_1:64484228-64484247 Msa1030430:intron 20.0%
!!! TTATGATAATAGTGTTGAAT+TGG + chr7_1:64484617-64484636 Msa1030430:intron 20.0%
!!! TTGATTTTGGGATATTTTTA+TGG + chr7_1:64484663-64484682 Msa1030430:intron 20.0%
!!! TTTATGGTTGTTTTATAATG+TGG + chr7_1:64484679-64484698 Msa1030430:intron 20.0%
!! AAAAAAATGAAAGAACAAAG+AGG + chr7_1:64484722-64484741 Msa1030430:intron 20.0%
!! AAAAAATGAAAGAACAAAGA+GGG + chr7_1:64484723-64484742 Msa1030430:intron 20.0%
!! ATACCATTTGATTAAAACAA+CGG + chr7_1:64484952-64484971 Msa1030430:intron 20.0%
!!! AATTTCTGATAATTTGAAGT+AGG + chr7_1:64485080-64485099 Msa1030430:intron 20.0%
!! AATAAACAACTTGATATCTT+TGG - chr7_1:64485250-64485269 None:intergenic 20.0%
!!! TTTTATATTTGAAGTATGTG+CGG + chr7_1:64486140-64486159 Msa1030430:intron 20.0%
!!! ATATTTTTTCACTCATTTCA+AGG - chr7_1:64486232-64486251 None:intergenic 20.0%
!!! TTCATTTGTTGTAATTCAAA+TGG - chr7_1:64487327-64487346 None:intergenic 20.0%
!! TTTGAATTACAACAAATGAA+AGG + chr7_1:64487327-64487346 Msa1030430:intron 20.0%
!!! CCTTATTTAAATGGAAATTA+CGG + chr7_1:64487568-64487587 Msa1030430:intron 20.0%
!!! TTTTTTCGAAGAAATAAACA+AGG - chr7_1:64487867-64487886 None:intergenic 20.0%
!!! TAAGCTTTATTTAGTTACAA+TGG - chr7_1:64488395-64488414 None:intergenic 20.0%
!! TATTATGAATTCATAACAGA+TGG - chr7_1:64488929-64488948 None:intergenic 20.0%
!! TGTTATGAATTCATAATATC+TGG + chr7_1:64488931-64488950 Msa1030430:intron 20.0%
!!! ATATGTATGATGATTTCTTT+TGG + chr7_1:64488964-64488983 Msa1030430:intron 20.0%
!!! TACAATAGTTTTAATCATGA+TGG + chr7_1:64488998-64489017 Msa1030430:intron 20.0%
!!! TGATAATTTTATGAATCCAT+GGG + chr7_1:64489283-64489302 Msa1030430:CDS 20.0%
!!! ATATTCTTTAACTGAGTTTT+TGG - chr7_1:64489395-64489414 None:intergenic 20.0%
!! AAACTCAGTTAAAGAATATA+TGG + chr7_1:64489396-64489415 Msa1030430:CDS 20.0%
!! AACTCAGTTAAAGAATATAT+GGG + chr7_1:64489397-64489416 Msa1030430:CDS 20.0%
!! ATGGGAAAATATATTCATTA+AGG - chr7_1:64489662-64489681 None:intergenic 20.0%
! GAATCAAAGAAGAAGAAAAA+TGG + chr7_1:64483886-64483905 Msa1030430:exon 25.0%
!!! GTCTTTTTTTGATGTTTTTG+TGG + chr7_1:64484227-64484246 Msa1030430:intron 25.0%
!! AAAGTTACAAACTTTTCATC+TGG + chr7_1:64484251-64484270 Msa1030430:intron 25.0%
!! AAGTTACAAACTTTTCATCT+GGG + chr7_1:64484252-64484271 Msa1030430:intron 25.0%
!! CCATTCTTTTCTTGAAAATT+CGG - chr7_1:64484471-64484490 None:intergenic 25.0%
!!! CGAATTTTCAAGAAAAGAAT+GGG + chr7_1:64484469-64484488 Msa1030430:intron 25.0%
!!! TTTGATGTTGTTGTTGATTT+TGG + chr7_1:64484650-64484669 Msa1030430:intron 25.0%
!!! TTGATGTTGTTGTTGATTTT+GGG + chr7_1:64484651-64484670 Msa1030430:intron 25.0%
!!! TTTTAAGTATTAGTCTACGA+TGG - chr7_1:64484838-64484857 None:intergenic 25.0%
! CTCTAGATAATAGATGTTAA+TGG + chr7_1:64484891-64484910 Msa1030430:intron 25.0%
! CTATTTCAATCGTAAAAATG+AGG - chr7_1:64484921-64484940 None:intergenic 25.0%
!!! TATCCGTTGTTTTAATCAAA+TGG - chr7_1:64484958-64484977 None:intergenic 25.0%
! AAGTTGTTTATTAATTCACC+TGG + chr7_1:64485258-64485277 Msa1030430:CDS 25.0%
! AAACTAATGCGAGTTATTAA+AGG - chr7_1:64485638-64485657 None:intergenic 25.0%
! TTTATTGAATCAGTGAGAAT+TGG + chr7_1:64485723-64485742 Msa1030430:intron 25.0%
! AGATTCATTAAACTGAGAAA+TGG - chr7_1:64485763-64485782 None:intergenic 25.0%
! TAGTTGACAATAATCAAAAC+CGG - chr7_1:64486045-64486064 None:intergenic 25.0%
! GATTATTGTCAACTAGTAAT+AGG + chr7_1:64486050-64486069 Msa1030430:intron 25.0%
!!! ATATCTTTTTTCATAAACCC+CGG + chr7_1:64486248-64486267 Msa1030430:intron 25.0%
! TATCCAAGTCATCTATAAAT+AGG - chr7_1:64486437-64486456 None:intergenic 25.0%
!! TTTATAGATGACTTGGATAT+AGG + chr7_1:64486438-64486457 Msa1030430:intron 25.0%
!!! TTTTTTCTTTCTCTTTCACA+AGG - chr7_1:64486791-64486810 None:intergenic 25.0%
! AGATTCTGACAAGATTATAT+GGG - chr7_1:64487006-64487025 None:intergenic 25.0%
! ATTATAGAAGTAGAACACTA+TGG + chr7_1:64487050-64487069 Msa1030430:intron 25.0%
! TGGATTCTACAAAATCATAT+AGG - chr7_1:64487307-64487326 None:intergenic 25.0%
!!! TCATTATTTTTTAGAAGTGC+TGG - chr7_1:64487387-64487406 None:intergenic 25.0%
!! AATAATCACACAACTTTTGA+TGG - chr7_1:64487546-64487565 None:intergenic 25.0%
! CCGTAATTTCCATTTAAATA+AGG - chr7_1:64487571-64487590 None:intergenic 25.0%
!! TATATGTCCTTTTAGTCAAA+TGG - chr7_1:64488151-64488170 None:intergenic 25.0%
! ATAGATTAAGCAACTAAACA+TGG - chr7_1:64488655-64488674 None:intergenic 25.0%
! TTAACTTCAAAGAACAAGAA+AGG - chr7_1:64488785-64488804 None:intergenic 25.0%
!! AGCTACTGCAAAATAATTTT+TGG - chr7_1:64488872-64488891 None:intergenic 25.0%
!!! ATAGATAGAAGTTTTTTACC+TGG + chr7_1:64488892-64488911 Msa1030430:intron 25.0%
! AAGATACTATCAAGAATTAC+AGG + chr7_1:64489138-64489157 Msa1030430:CDS 25.0%
!! GTGATAATTTTATGAATCCA+TGG + chr7_1:64489282-64489301 Msa1030430:CDS 25.0%
! AAGAATATATGGGAAATTGA+AGG + chr7_1:64489407-64489426 Msa1030430:CDS 25.0%
!!! ATTTTTGAGTATGAAAGCAA+CGG - chr7_1:64489513-64489532 None:intergenic 25.0%
! AAAATCCCTTTAATACTTGT+TGG - chr7_1:64489549-64489568 None:intergenic 25.0%
GTTTAACAATGTCTTCTTGT+TGG - chr7_1:64483954-64483973 None:intergenic 30.0%
TTGAAAATGGAATTTGAGAG+TGG - chr7_1:64483994-64484013 None:intergenic 30.0%
! GTTCTTTGTTTGGTTGAAAA+TGG - chr7_1:64484007-64484026 None:intergenic 30.0%
! AACGATTGTTGTTCTTTGTT+TGG - chr7_1:64484017-64484036 None:intergenic 30.0%
CCAAGAAAACAATTCTTTGA+CGG - chr7_1:64484156-64484175 None:intergenic 30.0%
! CGTCAAAGAATTGTTTTCTT+GGG + chr7_1:64484154-64484173 Msa1030430:CDS 30.0%
!!! TGAGTGTTTCATAGTTTTGT+GGG - chr7_1:64484295-64484314 None:intergenic 30.0%
TTGAATGTAATCACATGTGT+TGG + chr7_1:64484377-64484396 Msa1030430:intron 30.0%
TTCAAAAACCAATTAATCCC+GGG - chr7_1:64484441-64484460 None:intergenic 30.0%
GTTCAAAAACCAATTAATCC+CGG - chr7_1:64484442-64484461 None:intergenic 30.0%
!!! GGATTAATTGGTTTTTGAAC+CGG + chr7_1:64484442-64484461 Msa1030430:intron 30.0%
TTTCTTGAAAATTCGGTATC+CGG - chr7_1:64484464-64484483 None:intergenic 30.0%
!! CCGAATTTTCAAGAAAAGAA+TGG + chr7_1:64484468-64484487 Msa1030430:intron 30.0%
ATCATGAAGAATGGACAAAT+AGG + chr7_1:64484568-64484587 Msa1030430:intron 30.0%
TCATGAAGAATGGACAAATA+GGG + chr7_1:64484569-64484588 Msa1030430:intron 30.0%
TAGGGAGAAAAGGTTAAAAA+AGG + chr7_1:64484587-64484606 Msa1030430:intron 30.0%
!! AATGTGGTTTCATTTTGAAG+AGG + chr7_1:64484695-64484714 Msa1030430:intron 30.0%
! TTCTGATAATTTGAAGTAGG+CGG + chr7_1:64485083-64485102 Msa1030430:intron 30.0%
!!! GATTAGTCAGCTTTTGTTTT+TGG + chr7_1:64485209-64485228 Msa1030430:CDS 30.0%
AACAACTTGATATCTTTGGT+AGG - chr7_1:64485246-64485265 None:intergenic 30.0%
TTGTTTATTAATTCACCTGG+TGG + chr7_1:64485261-64485280 Msa1030430:CDS 30.0%
! ATTGCTATTGTTCTGCAATA+TGG + chr7_1:64485471-64485490 Msa1030430:intron 30.0%
AGCAATTAGCAGAATAATGA+CGG - chr7_1:64485791-64485810 None:intergenic 30.0%
!! TGAATCATAACTCTGGAATT+CGG - chr7_1:64485971-64485990 None:intergenic 30.0%
CGCAGTTAAAGAAAATCATA+TGG - chr7_1:64486186-64486205 None:intergenic 30.0%
!!! TTTTTTCACTCATTTCAAGG+TGG - chr7_1:64486229-64486248 None:intergenic 30.0%
TCAAAGCTAATCAAACTAGT+TGG - chr7_1:64486320-64486339 None:intergenic 30.0%
AGTCCTATTTATAGATGACT+TGG + chr7_1:64486431-64486450 Msa1030430:intron 30.0%
GTTAGTATCAGTTAAATGAC+AGG - chr7_1:64486480-64486499 None:intergenic 30.0%
GTCATTTAACTGATACTAAC+TGG + chr7_1:64486480-64486499 Msa1030430:intron 30.0%
GGTCTACTAAATCATAAATC+CGG + chr7_1:64486567-64486586 Msa1030430:intron 30.0%
ATGATGATAACAACCTTTAG+AGG + chr7_1:64486621-64486640 Msa1030430:intron 30.0%
AAGATACAGTACAATACAAG+AGG - chr7_1:64486896-64486915 None:intergenic 30.0%
CAGATTCTGACAAGATTATA+TGG - chr7_1:64487007-64487026 None:intergenic 30.0%
TAGGATCAGCATAAATTTAG+TGG - chr7_1:64487288-64487307 None:intergenic 30.0%
GGTGATTTGAATTTGACAAT+TGG - chr7_1:64487446-64487465 None:intergenic 30.0%
!!! TTATTTTTTCTGCACTTCTC+TGG + chr7_1:64487906-64487925 Msa1030430:intron 30.0%
AATTTACAGCAAAAACCATG+TGG + chr7_1:64488076-64488095 Msa1030430:intron 30.0%
AAAAGGACATATAATGTTGC+TGG + chr7_1:64488158-64488177 Msa1030430:intron 30.0%
!! ATCCATTGATTCATAGTTGA+TGG + chr7_1:64488238-64488257 Msa1030430:intron 30.0%
AACCATCAACTATGAATCAA+TGG - chr7_1:64488243-64488262 None:intergenic 30.0%
GTAGATGCATTATATTAGAG+TGG + chr7_1:64488831-64488850 Msa1030430:intron 30.0%
AAACAGTGAAGTGTAATTAC+AGG + chr7_1:64489059-64489078 Msa1030430:intron 30.0%
!!! TGGAAAGAGAAGTATCATTT+TGG - chr7_1:64489213-64489232 None:intergenic 30.0%
TATTCTTGTGCAGATTGAAT+TGG + chr7_1:64489250-64489269 Msa1030430:intron 30.0%
!! GTTGATGATGTTATTGATGA+CGG + chr7_1:64489326-64489345 Msa1030430:CDS 30.0%
!! TTCTTTAACTGAGTTTTTGG+AGG - chr7_1:64489392-64489411 None:intergenic 30.0%
GAAATTGAAGGAAACTCAAA+AGG + chr7_1:64489419-64489438 Msa1030430:CDS 30.0%
! ATATTTTCCCATATGTCATG+AGG + chr7_1:64489670-64489689 Msa1030430:three_prime_UTR 30.0%
! TTTGGTAACTACTAACCGAT+GGG - chr7_1:64483841-64483860 None:intergenic 35.0%
!! TTTTGGTAACTACTAACCGA+TGG - chr7_1:64483842-64483861 None:intergenic 35.0%
!! CTGGTTTAGCTTCTTTGTTT+TGG - chr7_1:64483859-64483878 None:intergenic 35.0%
CTTCTTTGATTCTTCTCTTC+TGG - chr7_1:64483878-64483897 None:intergenic 35.0%
!! GGTTTTGGCAGATAAATCAT+GGG - chr7_1:64484080-64484099 None:intergenic 35.0%
GTATCAAGCTCTTCGAATTT+GGG - chr7_1:64484118-64484137 None:intergenic 35.0%
AGTATCAAGCTCTTCGAATT+TGG - chr7_1:64484119-64484138 None:intergenic 35.0%
! CCGTCAAAGAATTGTTTTCT+TGG + chr7_1:64484153-64484172 Msa1030430:CDS 35.0%
! AATTGTTTTCTTGGGTTCTC+AGG + chr7_1:64484162-64484181 Msa1030430:CDS 35.0%
!! GTGAGTGTTTCATAGTTTTG+TGG - chr7_1:64484296-64484315 None:intergenic 35.0%
! ATCACATGTGTTGGTGTAAT+TGG + chr7_1:64484386-64484405 Msa1030430:intron 35.0%
! TCACATGTGTTGGTGTAATT+GGG + chr7_1:64484387-64484406 Msa1030430:intron 35.0%
TCAAAAACCAATTAATCCCG+GGG - chr7_1:64484440-64484459 None:intergenic 35.0%
TTGTCCATTCTTCATGATGT+TGG - chr7_1:64484566-64484585 None:intergenic 35.0%
AATGGACAAATAGGGAGAAA+AGG + chr7_1:64484577-64484596 Msa1030430:intron 35.0%
ATATAGACCACCTTCATAAG+TGG + chr7_1:64484790-64484809 Msa1030430:intron 35.0%
CTCATGACTCTTCATATTCA+TGG - chr7_1:64485024-64485043 None:intergenic 35.0%
! GTGAATTTCTTTGTTTGAGC+AGG + chr7_1:64485161-64485180 Msa1030430:intron 35.0%
! AATTTCTTTGTTTGAGCAGG+TGG + chr7_1:64485164-64485183 Msa1030430:intron 35.0%
! TACTCAGTGTTGTTAAACAG+CGG + chr7_1:64485423-64485442 Msa1030430:intron 35.0%
! ACATGGATTGCAGAAATTAG+CGG - chr7_1:64485572-64485591 None:intergenic 35.0%
TGAGAATTGGAAGTGAAGTA+TGG + chr7_1:64485736-64485755 Msa1030430:intron 35.0%
!! AGGTTGATGAATCATAACTC+TGG - chr7_1:64485978-64485997 None:intergenic 35.0%
GTTATGATTCATCAACCTCT+CGG + chr7_1:64485980-64485999 Msa1030430:CDS 35.0%
TTATGATTCATCAACCTCTC+GGG + chr7_1:64485981-64486000 Msa1030430:CDS 35.0%
TTGACAATAATCAAAACCGG+AGG - chr7_1:64486042-64486061 None:intergenic 35.0%
!! AAGGTGGAACTGATTTTAAC+AGG - chr7_1:64486213-64486232 None:intergenic 35.0%
GAACCTAAAAATGTTGCACA+TGG + chr7_1:64486394-64486413 Msa1030430:intron 35.0%
! TAGCCATGTGCAACATTTTT+AGG - chr7_1:64486400-64486419 None:intergenic 35.0%
CTGATACTAACTGGCTATTA+CGG + chr7_1:64486489-64486508 Msa1030430:intron 35.0%
!! TACTACTTACAAAAGTGCTC+CGG - chr7_1:64486589-64486608 None:intergenic 35.0%
!! CTTAGAGGTGTTTGATCAAA+TGG - chr7_1:64486969-64486988 None:intergenic 35.0%
GCTACATGAATCAAACTTAG+AGG - chr7_1:64486984-64487003 None:intergenic 35.0%
GCATACAATAGATTGTGACA+TGG + chr7_1:64487513-64487532 Msa1030430:intron 35.0%
! ATCACACAACTTTTGATGGA+AGG - chr7_1:64487542-64487561 None:intergenic 35.0%
AACCAGAATATTTACTGAGG+GGG - chr7_1:64487601-64487620 None:intergenic 35.0%
GAACCAGAATATTTACTGAG+GGG - chr7_1:64487602-64487621 None:intergenic 35.0%
GGAACCAGAATATTTACTGA+GGG - chr7_1:64487603-64487622 None:intergenic 35.0%
TGGAACCAGAATATTTACTG+AGG - chr7_1:64487604-64487623 None:intergenic 35.0%
TACAAAGACAACAAGTTTGC+CGG + chr7_1:64487708-64487727 Msa1030430:intron 35.0%
AACAAGGAAACACTGTTTCA+GGG - chr7_1:64487851-64487870 None:intergenic 35.0%
AAACAAGGAAACACTGTTTC+AGG - chr7_1:64487852-64487871 None:intergenic 35.0%
AAAATAAAGCCAGCGCAATA+GGG - chr7_1:64487968-64487987 None:intergenic 35.0%
!! ATTTTCTTGTCTGGTTTCCA+AGG + chr7_1:64487983-64488002 Msa1030430:intron 35.0%
!! TTTTCTTGTCTGGTTTCCAA+GGG + chr7_1:64487984-64488003 Msa1030430:intron 35.0%
TATCCGACCATTTGACTAAA+AGG + chr7_1:64488141-64488160 Msa1030430:intron 35.0%
! TGTCCTTTTAGTCAAATGGT+CGG - chr7_1:64488147-64488166 None:intergenic 35.0%
!! AATCAATGGATTGCCATAGA+AGG - chr7_1:64488229-64488248 None:intergenic 35.0%
TCAAACCAACAGCCATAATA+GGG - chr7_1:64488474-64488493 None:intergenic 35.0%
! ACTATCCCTTCTAAAGATTG+AGG - chr7_1:64488564-64488583 None:intergenic 35.0%
! TCAATCTTTAGAAGGGATAG+TGG + chr7_1:64488563-64488582 Msa1030430:intron 35.0%
TTTAAATCACGCTTACTGCT+GGG + chr7_1:64488732-64488751 Msa1030430:intron 35.0%
!!! TTTTTTACCTGGAGTTGTGT+TGG + chr7_1:64488903-64488922 Msa1030430:intron 35.0%
GATATATCAATTCTCTCGCA+CGG - chr7_1:64489101-64489120 None:intergenic 35.0%
TGGACAACAAGCTAATTACA+CGG - chr7_1:64489193-64489212 None:intergenic 35.0%
!! TTTAACTGAGTTTTTGGAGG+TGG - chr7_1:64489389-64489408 None:intergenic 35.0%
ATCAACTGCTGTATGAGTTA+TGG + chr7_1:64489469-64489488 Msa1030430:exon 35.0%
TCAACTGCTGTATGAGTTAT+GGG + chr7_1:64489470-64489489 Msa1030430:exon 35.0%
! TAATACTTGTTGGAGGTGAT+AGG - chr7_1:64489539-64489558 None:intergenic 35.0%
TCACCTCCAACAAGTATTAA+AGG + chr7_1:64489540-64489559 Msa1030430:three_prime_UTR 35.0%
CACCTCCAACAAGTATTAAA+GGG + chr7_1:64489541-64489560 Msa1030430:three_prime_UTR 35.0%
! ATCCCTTTAATACTTGTTGG+AGG - chr7_1:64489546-64489565 None:intergenic 35.0%
CATACAACCTCATGACATAT+GGG - chr7_1:64489680-64489699 None:intergenic 35.0%
TCATACAACCTCATGACATA+TGG - chr7_1:64489681-64489700 None:intergenic 35.0%
!!! CTGTCGTTTTAAATGGAGAA+AGG - chr7_1:64489711-64489730 None:intergenic 35.0%
AAAAAGGTCACTGTTCCCAT+CGG + chr7_1:64483823-64483842 Msa1030430:five_prime_UTR 40.0%
TTGTTGGAGTTGAAGGTTAG+TGG - chr7_1:64483938-64483957 None:intergenic 40.0%
TGTCTTCTTGTTGGAGTTGA+AGG - chr7_1:64483945-64483964 None:intergenic 40.0%
AGCCAGTTAGAGGATAAAGT+GGG - chr7_1:64484052-64484071 None:intergenic 40.0%
AAGCCAGTTAGAGGATAAAG+TGG - chr7_1:64484053-64484072 None:intergenic 40.0%
!! CGGTTTTGGCAGATAAATCA+TGG - chr7_1:64484081-64484100 None:intergenic 40.0%
TAACATGTCAGTGTCGTATG+TGG - chr7_1:64484326-64484345 None:intergenic 40.0%
AGCACCAACATCATGAAGAA+TGG + chr7_1:64484559-64484578 Msa1030430:intron 40.0%
!! GTGGTTTCATTTTGAAGAGG+TGG + chr7_1:64484698-64484717 Msa1030430:intron 40.0%
!! GAGACAATGTTTGCTGTTGT+TGG - chr7_1:64484874-64484893 None:intergenic 40.0%
GACAGTGACTTGATTGATGT+CGG - chr7_1:64484997-64485016 None:intergenic 40.0%
! ACAGTATCGTCGATTGTCAT+TGG + chr7_1:64485057-64485076 Msa1030430:intron 40.0%
CAAACACACAATCAGATACC+AGG - chr7_1:64485142-64485161 None:intergenic 40.0%
!! TATTTGCACTTGACTTGTCG+TGG + chr7_1:64485348-64485367 Msa1030430:intron 40.0%
AAACGCAGTGATGTCAAACA+TGG - chr7_1:64485589-64485608 None:intergenic 40.0%
GTTTAGTGATTCTCTGCTTG+TGG + chr7_1:64485654-64485673 Msa1030430:intron 40.0%
!! TTTTGTTTACCGTTCCATGC+AGG + chr7_1:64485821-64485840 Msa1030430:intron 40.0%
TGATGCCATGAAGTTATGCA+AGG + chr7_1:64485856-64485875 Msa1030430:CDS 40.0%
ATCTGCCTTGCATAACTTCA+TGG - chr7_1:64485864-64485883 None:intergenic 40.0%
TCAAAACCGGAGGATATAAG+TGG - chr7_1:64486032-64486051 None:intergenic 40.0%
! GGTCTGAAGTTTGTTTGTCA+TGG + chr7_1:64486071-64486090 Msa1030430:intron 40.0%
! AAGTATGTGCGGAGAAGTAT+GGG + chr7_1:64486151-64486170 Msa1030430:intron 40.0%
ACTACTGTACAGAGCTGAAT+AGG + chr7_1:64486546-64486565 Msa1030430:intron 40.0%
CATTGTGCCTAATTCTCTTC+TGG + chr7_1:64486657-64486676 Msa1030430:intron 40.0%
TACACTTGTGACATTGTGGT+TGG - chr7_1:64486752-64486771 None:intergenic 40.0%
AAAAGCCACTTGTGACATTG+TGG + chr7_1:64486807-64486826 Msa1030430:intron 40.0%
GGTAGGCTACATGAATCAAA+CGG - chr7_1:64487078-64487097 None:intergenic 40.0%
TAGGAGTTCTCTTAGATGAG+TGG - chr7_1:64487467-64487486 None:intergenic 40.0%
ACCAGAATATTTACTGAGGG+GGG - chr7_1:64487600-64487619 None:intergenic 40.0%
ACTGACTATGAAGTCGTGAT+GGG - chr7_1:64487652-64487671 None:intergenic 40.0%
AACTGACTATGAAGTCGTGA+TGG - chr7_1:64487653-64487672 None:intergenic 40.0%
TTTGTACTAGCAAGTGACAG+CGG - chr7_1:64487694-64487713 None:intergenic 40.0%
TTTGTTCTGTTCATCTCGTC+AGG + chr7_1:64487784-64487803 Msa1030430:intron 40.0%
TTGTTCTGTTCATCTCGTCA+GGG + chr7_1:64487785-64487804 Msa1030430:intron 40.0%
ACAAGGAAACACTGTTTCAG+GGG - chr7_1:64487850-64487869 None:intergenic 40.0%
! TGGTCTTTTGCACACTACAA+TGG + chr7_1:64487926-64487945 Msa1030430:intron 40.0%
AAATAAAGCCAGCGCAATAG+GGG - chr7_1:64487967-64487986 None:intergenic 40.0%
GAAAATAAAGCCAGCGCAAT+AGG - chr7_1:64487969-64487988 None:intergenic 40.0%
!!! GCTGGCTTTATTTTCTTGTC+TGG + chr7_1:64487974-64487993 Msa1030430:intron 40.0%
TTCGCTATCCTTTGTGTTCA+CGG + chr7_1:64488029-64488048 Msa1030430:intron 40.0%
GCAGTTCATCTATCATGTCA+GGG + chr7_1:64488052-64488071 Msa1030430:intron 40.0%
CAGTTCATCTATCATGTCAG+GGG + chr7_1:64488053-64488072 Msa1030430:intron 40.0%
CAAAAACCACATCTCATCAG+CGG - chr7_1:64488111-64488130 None:intergenic 40.0%
! GCTGATGAGATGTGGTTTTT+GGG + chr7_1:64488110-64488129 Msa1030430:intron 40.0%
AAAGCTGATGCACAGTTAGT+TGG + chr7_1:64488203-64488222 Msa1030430:intron 40.0%
ATATCGCAGCATGTTTCGTA+CGG - chr7_1:64488275-64488294 None:intergenic 40.0%
ACGAAACATGCTGCGATATT+TGG + chr7_1:64488276-64488295 Msa1030430:intron 40.0%
CGAAACATGCTGCGATATTT+GGG + chr7_1:64488277-64488296 Msa1030430:intron 40.0%
TATTCAGCGTCTCTATGATG+TGG + chr7_1:64488328-64488347 Msa1030430:intron 40.0%
TTGAGTTCAAGTGGGAGATT+GGG - chr7_1:64488448-64488467 None:intergenic 40.0%
TGAACTCAAGTGCCCTATTA+TGG + chr7_1:64488459-64488478 Msa1030430:intron 40.0%
CTCAAACCAACAGCCATAAT+AGG - chr7_1:64488475-64488494 None:intergenic 40.0%
TCACCTCCTCAATCTTTAGA+AGG + chr7_1:64488555-64488574 Msa1030430:intron 40.0%
! CACCTCCTCAATCTTTAGAA+GGG + chr7_1:64488556-64488575 Msa1030430:intron 40.0%
! ATCCCTTCTAAAGATTGAGG+AGG - chr7_1:64488561-64488580 None:intergenic 40.0%
!! GATCTTCCCTTGCTTTTAGA+GGG - chr7_1:64488591-64488610 None:intergenic 40.0%
!! AGATCTTCCCTTGCTTTTAG+AGG - chr7_1:64488592-64488611 None:intergenic 40.0%
! CAACATCACTTGAGCTTTGT+AGG - chr7_1:64488619-64488638 None:intergenic 40.0%
!!! ACATTTTGGTTAGCGTGTCT+GGG - chr7_1:64488689-64488708 None:intergenic 40.0%
!!! TACATTTTGGTTAGCGTGTC+TGG - chr7_1:64488690-64488709 None:intergenic 40.0%
CTTTAAATCACGCTTACTGC+TGG + chr7_1:64488731-64488750 Msa1030430:intron 40.0%
TTAAATCACGCTTACTGCTG+GGG + chr7_1:64488733-64488752 Msa1030430:intron 40.0%
TGTGCAGATTGAATTGGACA+CGG + chr7_1:64489256-64489275 Msa1030430:intron 40.0%
!! GTTATTGATGACGGAAAACC+AGG + chr7_1:64489335-64489354 Msa1030430:CDS 40.0%
TATGAGTTATGGGACAAGCA+AGG + chr7_1:64489480-64489499 Msa1030430:exon 40.0%
!!! GTAGCAGCTGTCGTTTTAAA+TGG - chr7_1:64489718-64489737 None:intergenic 40.0%
GGTTAGTGGCAAACATGTTG+AGG - chr7_1:64483924-64483943 None:intergenic 45.0%
GACCCACTTTATCCTCTAAC+TGG + chr7_1:64484047-64484066 Msa1030430:CDS 45.0%
ATGGGAAACAAGCCAGTTAG+AGG - chr7_1:64484062-64484081 None:intergenic 45.0%
TCTTCGAATTTGGGAAGCCA+TGG - chr7_1:64484109-64484128 None:intergenic 45.0%
! TCTTTGACGGAGAAGCATGT+TGG - chr7_1:64484143-64484162 None:intergenic 45.0%
TGTAATTGGGTCTCCACTAG+TGG + chr7_1:64484400-64484419 Msa1030430:intron 45.0%
ATTTGGTCCCCGGGATTAAT+TGG + chr7_1:64484430-64484449 Msa1030430:intron 45.0%
! TATCTGACGCAGGTCAGTTT+TGG - chr7_1:64484502-64484521 None:intergenic 45.0%
ATACCAGACACGCTTTCGAT+CGG + chr7_1:64484519-64484538 Msa1030430:intron 45.0%
ACGCTTTCGATCGGAATAGT+CGG + chr7_1:64484528-64484547 Msa1030430:intron 45.0%
AGACCACCTTCATAAGTGGT+CGG + chr7_1:64484794-64484813 Msa1030430:intron 45.0%
CTACGATGGACCACTTATGA+AGG - chr7_1:64484824-64484843 None:intergenic 45.0%
!! ATACCAGGTGAGTTCTAAGG+TGG - chr7_1:64485127-64485146 None:intergenic 45.0%
CAGATACCAGGTGAGTTCTA+AGG - chr7_1:64485130-64485149 None:intergenic 45.0%
! TTGCTCAATAGCAGCTCTAG+CGG + chr7_1:64485510-64485529 Msa1030430:intron 45.0%
AAAGGCTGAAAGCTTGTGCA+TGG - chr7_1:64485620-64485639 None:intergenic 45.0%
GCTTGTGGAAACTGAGTTGT+TGG + chr7_1:64485669-64485688 Msa1030430:intron 45.0%
TTTACCGTTCCATGCAGGAA+TGG + chr7_1:64485826-64485845 Msa1030430:intron 45.0%
TTACCGTTCCATGCAGGAAT+GGG + chr7_1:64485827-64485846 Msa1030430:intron 45.0%
CATAAACTCCCATTCCTGCA+TGG - chr7_1:64485838-64485857 None:intergenic 45.0%
GACTGTCCACTTATATCCTC+CGG + chr7_1:64486023-64486042 Msa1030430:intron 45.0%
GAAGTATGTGCGGAGAAGTA+TGG + chr7_1:64486150-64486169 Msa1030430:intron 45.0%
AGATTTGACGCAATCATGCC+GGG - chr7_1:64486269-64486288 None:intergenic 45.0%
CAGATTTGACGCAATCATGC+CGG - chr7_1:64486270-64486289 None:intergenic 45.0%
ATTAGGCACAATGCAGAGGA+TGG - chr7_1:64486650-64486669 None:intergenic 45.0%
GAGAATTAGGCACAATGCAG+AGG - chr7_1:64486654-64486673 None:intergenic 45.0%
AGGTCTGCCAGAAGAGAATT+AGG - chr7_1:64486667-64486686 None:intergenic 45.0%
GAAGAAACCTCCAATCAGGA+AGG - chr7_1:64486687-64486706 None:intergenic 45.0%
GACAGAAGAAACCTCCAATC+AGG - chr7_1:64486691-64486710 None:intergenic 45.0%
AATGTCACCCAAGTGCTATC+CGG - chr7_1:64486727-64486746 None:intergenic 45.0%
CCTGTACACTTGTGACATTG+TGG - chr7_1:64486756-64486775 None:intergenic 45.0%
CCACAATGTCACAAGTGTAC+AGG + chr7_1:64486753-64486772 Msa1030430:intron 45.0%
AAAGGACTGAGTGGCTCTTT+GGG - chr7_1:64486860-64486879 None:intergenic 45.0%
TAAAGGACTGAGTGGCTCTT+TGG - chr7_1:64486861-64486880 None:intergenic 45.0%
AAAGAGCCACTCAGTCCTTT+AGG + chr7_1:64486860-64486879 Msa1030430:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr7_1:64487099-64487118 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr7_1:64487100-64487119 None:intergenic 45.0%
TCCCCCCTCAGTAAATATTC+TGG + chr7_1:64487596-64487615 Msa1030430:intron 45.0%
! ACTATGAAGTCGTGATGGGA+GGG - chr7_1:64487648-64487667 None:intergenic 45.0%
ACAGAAAACATAGCAGCGGA+AGG - chr7_1:64487760-64487779 None:intergenic 45.0%
CTGCACAGAAAACATAGCAG+CGG - chr7_1:64487764-64487783 None:intergenic 45.0%
CACTGTTTCAGGGGTCAAAT+CGG - chr7_1:64487841-64487860 None:intergenic 45.0%
TCGCTATCCTTTGTGTTCAC+GGG + chr7_1:64488030-64488049 Msa1030430:intron 45.0%
GGCAGTTCATCTATCATGTC+AGG + chr7_1:64488051-64488070 Msa1030430:intron 45.0%
! CGCTGATGAGATGTGGTTTT+TGG + chr7_1:64488109-64488128 Msa1030430:intron 45.0%
!!! GAGATGTGGTTTTTGGGTCA+AGG + chr7_1:64488116-64488135 Msa1030430:intron 45.0%
!! CACAGTTAGTTGGCCTTCTA+TGG + chr7_1:64488213-64488232 Msa1030430:intron 45.0%
CTTGAGTTCAAGTGGGAGAT+TGG - chr7_1:64488449-64488468 None:intergenic 45.0%
! TAGGGCACTTGAGTTCAAGT+GGG - chr7_1:64488456-64488475 None:intergenic 45.0%
! ATAGGGCACTTGAGTTCAAG+TGG - chr7_1:64488457-64488476 None:intergenic 45.0%
AAGTGCCCTATTATGGCTGT+TGG + chr7_1:64488466-64488485 Msa1030430:intron 45.0%
!! TGGCTGTTGGTTTGAGCATT+CGG + chr7_1:64488479-64488498 Msa1030430:intron 45.0%
! AGTGGTTCCCTCTAAAAGCA+AGG + chr7_1:64488581-64488600 Msa1030430:intron 45.0%
! GTGGTTCCCTCTAAAAGCAA+GGG + chr7_1:64488582-64488601 Msa1030430:intron 45.0%
! GGTGAAGCTGGGTTACATTT+TGG - chr7_1:64488703-64488722 None:intergenic 45.0%
! GTAAGCGTGATTTAAAGCCG+TGG - chr7_1:64488728-64488747 None:intergenic 45.0%
!! CTATTTCTGCTTGGGTTGGA+AGG + chr7_1:64488756-64488775 Msa1030430:intron 45.0%
TACAGGAAAACCTGAAGAGC+AGG + chr7_1:64489155-64489174 Msa1030430:CDS 45.0%
CCATGGGAAGCGAAAGAATA+CGG + chr7_1:64489299-64489318 Msa1030430:CDS 45.0%
GGAAGCGAAAGAATACGGTT+TGG + chr7_1:64489304-64489323 Msa1030430:CDS 45.0%
TAAGAAGAAACTCCCCTCAG+AGG + chr7_1:64489442-64489461 Msa1030430:CDS 45.0%
! CAGTTGATGTTTCCTCTGAG+GGG - chr7_1:64489457-64489476 None:intergenic 45.0%
! GCAGTTGATGTTTCCTCTGA+GGG - chr7_1:64489458-64489477 None:intergenic 45.0%
! AGCAGTTGATGTTTCCTCTG+AGG - chr7_1:64489459-64489478 None:intergenic 45.0%
! AAGCCATGGAGAAGCGGTTT+TGG - chr7_1:64484095-64484114 None:intergenic 50.0%
TTTGGGAAGCCATGGAGAAG+CGG - chr7_1:64484101-64484120 None:intergenic 50.0%
AATTGGGTCTCCACTAGTGG+AGG + chr7_1:64484403-64484422 Msa1030430:intron 50.0%
ATTGGGTCTCCACTAGTGGA+GGG + chr7_1:64484404-64484423 Msa1030430:intron 50.0%
CCAAATTCACCCTCCACTAG+TGG - chr7_1:64484416-64484435 None:intergenic 50.0%
CCACTAGTGGAGGGTGAATT+TGG + chr7_1:64484413-64484432 Msa1030430:intron 50.0%
! ATTCCGATCGAAAGCGTGTC+TGG - chr7_1:64484525-64484544 None:intergenic 50.0%
CGATGGACCACTTATGAAGG+TGG - chr7_1:64484821-64484840 None:intergenic 50.0%
AGTAGGCGGACAACCTATGA+AGG + chr7_1:64485097-64485116 Msa1030430:intron 50.0%
CTAAGGTGGACCACCTTCAT+AGG - chr7_1:64485113-64485132 None:intergenic 50.0%
CCAGCAGTAATAGAACCACC+AGG - chr7_1:64485279-64485298 None:intergenic 50.0%
! CCTGGTGGTTCTATTACTGC+TGG + chr7_1:64485276-64485295 Msa1030430:CDS 50.0%
ACTCCCATTCCTGCATGGAA+CGG - chr7_1:64485833-64485852 None:intergenic 50.0%
GATGTGTCTACCGTTTGCCT+TGG + chr7_1:64485881-64485900 Msa1030430:CDS 50.0%
TGCTGCAAGTCCAAGGCAAA+CGG - chr7_1:64485894-64485913 None:intergenic 50.0%
CTTGGACTTGCAGCATCCAT+GGG + chr7_1:64485899-64485918 Msa1030430:CDS 50.0%
GATTTGACGCAATCATGCCG+GGG - chr7_1:64486268-64486287 None:intergenic 50.0%
CAGAGGATGGTGACCTCTAA+AGG - chr7_1:64486637-64486656 None:intergenic 50.0%
TTCTGGCAGACCTTCCTGAT+TGG + chr7_1:64486674-64486693 Msa1030430:intron 50.0%
ATGTCACCCAAGTGCTATCC+GGG - chr7_1:64486726-64486745 None:intergenic 50.0%
GGATAGCACTTGGGTGACAT+TGG + chr7_1:64486726-64486745 Msa1030430:intron 50.0%
GCCACTTGTGACATTGTGGT+TGG + chr7_1:64486811-64486830 Msa1030430:intron 50.0%
GCCAACCACAATGTCACAAG+TGG - chr7_1:64486748-64486767 None:intergenic 50.0%
AAGGACTGAGTGGCTCTTTG+GGG - chr7_1:64486859-64486878 None:intergenic 50.0%
TCCCAACTGCTCTCTTACTC+AGG + chr7_1:64486926-64486945 Msa1030430:intron 50.0%
GCCTGAGTAAGAGAGCAGTT+GGG - chr7_1:64486930-64486949 None:intergenic 50.0%
TGCCTGAGTAAGAGAGCAGT+TGG - chr7_1:64486931-64486950 None:intergenic 50.0%
AACTGCTCTCTTACTCAGGC+AGG + chr7_1:64486930-64486949 Msa1030430:intron 50.0%
ATGTAGCCTACCCCACTTAG+TGG + chr7_1:64487086-64487105 Msa1030430:intron 50.0%
TGTAGCCTACCCCACTTAGT+GGG + chr7_1:64487087-64487106 Msa1030430:intron 50.0%
CTTATCCCACTAAGTGGGGT+AGG - chr7_1:64487095-64487114 None:intergenic 50.0%
CTACCCCACTTAGTGGGATA+AGG + chr7_1:64487093-64487112 Msa1030430:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7_1:64487101-64487120 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7_1:64487098-64487117 Msa1030430:intron 50.0%
! CTATGAAGTCGTGATGGGAG+GGG - chr7_1:64487647-64487666 None:intergenic 50.0%
! GACTATGAAGTCGTGATGGG+AGG - chr7_1:64487649-64487668 None:intergenic 50.0%
GAAAACATAGCAGCGGAAGG+TGG - chr7_1:64487757-64487776 None:intergenic 50.0%
AGGGAATCCTCTTTCCGATG+TGG + chr7_1:64487804-64487823 Msa1030430:intron 50.0%
GGGAATCCTCTTTCCGATGT+GGG + chr7_1:64487805-64487824 Msa1030430:intron 50.0%
GGAATCCTCTTTCCGATGTG+GGG + chr7_1:64487806-64487825 Msa1030430:intron 50.0%
GAATCCTCTTTCCGATGTGG+GGG + chr7_1:64487807-64487826 Msa1030430:intron 50.0%
TTTCAGGGGTCAAATCGGAC+GGG - chr7_1:64487836-64487855 None:intergenic 50.0%
GTTTCAGGGGTCAAATCGGA+CGG - chr7_1:64487837-64487856 None:intergenic 50.0%
TGAACTGCCCGTGAACACAA+AGG - chr7_1:64488040-64488059 None:intergenic 50.0%
!! CAGCGGATTGCTAATCCACA+TGG - chr7_1:64488094-64488113 None:intergenic 50.0%
AGCAATCCGCTGATGAGATG+TGG + chr7_1:64488102-64488121 Msa1030430:intron 50.0%
CTGGAGCAGAACTTGAGCAT+TGG + chr7_1:64488177-64488196 Msa1030430:intron 50.0%
!! TTTTGGTTAGCGTGTCTGGG+AGG - chr7_1:64488686-64488705 None:intergenic 50.0%
TAACCCAGCTTCACCATCCA+CGG + chr7_1:64488708-64488727 Msa1030430:intron 50.0%
! GCGTGATTTAAAGCCGTGGA+TGG - chr7_1:64488724-64488743 None:intergenic 50.0%
!! TGCTGGGGCTATTTCTGCTT+GGG + chr7_1:64488748-64488767 Msa1030430:intron 50.0%
GGAAAACCTGAAGAGCAGGT+TGG + chr7_1:64489159-64489178 Msa1030430:intron 50.0%
CCATATCCAACCTGCTCTTC+AGG - chr7_1:64489168-64489187 None:intergenic 50.0%
! CCTGAAGAGCAGGTTGGATA+TGG + chr7_1:64489165-64489184 Msa1030430:intron 50.0%
CCGTATTCTTTCGCTTCCCA+TGG - chr7_1:64489302-64489321 None:intergenic 50.0%
GCAATTGGAGCAACTAGTCC+TGG - chr7_1:64489356-64489375 None:intergenic 50.0%
TAGCAACGTGTAGGTGGTGT+GGG - chr7_1:64489740-64489759 None:intergenic 50.0%
TTAGCAACGTGTAGGTGGTG+TGG - chr7_1:64489741-64489760 None:intergenic 50.0%
TGTGGTTAGCAACGTGTAGG+TGG - chr7_1:64489746-64489765 None:intergenic 50.0%
TGGTGTGGTTAGCAACGTGT+AGG - chr7_1:64489749-64489768 None:intergenic 50.0%
GGGAATTAGTTGCAGTGGTG+TGG - chr7_1:64489764-64489783 None:intergenic 50.0%
CTGCCAAAACCGCTTCTCCA+TGG + chr7_1:64484089-64484108 Msa1030430:CDS 55.0%
TGGAGGGTGAATTTGGTCCC+CGG + chr7_1:64484420-64484439 Msa1030430:intron 55.0%
GGTCCGACCACTTATGAAGG+TGG - chr7_1:64484800-64484819 None:intergenic 55.0%
GGTGGTCCGACCACTTATGA+AGG - chr7_1:64484803-64484822 None:intergenic 55.0%
GGTCGGACCACCTTCATAAG+TGG + chr7_1:64484811-64484830 Msa1030430:intron 55.0%
AGGCGGACAACCTATGAAGG+TGG + chr7_1:64485100-64485119 Msa1030430:intron 55.0%
GGTCCACCTTAGAACTCACC+TGG + chr7_1:64485121-64485140 Msa1030430:intron 55.0%
AAACAGCGGCTACAGCGTAG+TGG + chr7_1:64485437-64485456 Msa1030430:intron 55.0%
CCATGGATGCTGCAAGTCCA+AGG - chr7_1:64485901-64485920 None:intergenic 55.0%
CCTTGGACTTGCAGCATCCA+TGG + chr7_1:64485898-64485917 Msa1030430:CDS 55.0%
AGCAAGGAGGAATGCACCCA+TGG - chr7_1:64485918-64485937 None:intergenic 55.0%
CTCCTTGCTGCTGGTACGAA+GGG + chr7_1:64485929-64485948 Msa1030430:CDS 55.0%
TCCTTGCTGCTGGTACGAAG+GGG + chr7_1:64485930-64485949 Msa1030430:CDS 55.0%
! GTGCGGAGAAGTATGGGATG+TGG + chr7_1:64486157-64486176 Msa1030430:intron 55.0%
TGGCAGACCTTCCTGATTGG+AGG + chr7_1:64486677-64486696 Msa1030430:intron 55.0%
TCTGTCAATAACACCCCCCC+CGG + chr7_1:64486705-64486724 Msa1030430:intron 55.0%
TGTCACCCAAGTGCTATCCG+GGG - chr7_1:64486725-64486744 None:intergenic 55.0%
GGGTAGCACTTGGGTGACAT+TGG - chr7_1:64486837-64486856 None:intergenic 55.0%
! CTCTTTGGGGGGTAGCACTT+GGG - chr7_1:64486846-64486865 None:intergenic 55.0%
AGGACTGAGTGGCTCTTTGG+GGG - chr7_1:64486858-64486877 None:intergenic 55.0%
CCACTCAGTCCTTTAGGCAG+CGG + chr7_1:64486866-64486885 Msa1030430:intron 55.0%
AGAGGCTTTCCGCTGCCTAA+AGG - chr7_1:64486878-64486897 None:intergenic 55.0%
!! TTCTGGTTCCATCCCTGCCT+AGG + chr7_1:64487613-64487632 Msa1030430:intron 55.0%
CAAGTGACAGCGGTGCTTAG+GGG - chr7_1:64487684-64487703 None:intergenic 55.0%
GCAAGTGACAGCGGTGCTTA+GGG - chr7_1:64487685-64487704 None:intergenic 55.0%
AGCAAGTGACAGCGGTGCTT+AGG - chr7_1:64487686-64487705 None:intergenic 55.0%
GGCACATGACCTTCAAGCAC+CGG - chr7_1:64487736-64487755 None:intergenic 55.0%
TTTGTAGACGCTGCTGCCCT+TGG - chr7_1:64488003-64488022 None:intergenic 55.0%
AAGCCGTGGATGGTGAAGCT+GGG - chr7_1:64488714-64488733 None:intergenic 55.0%
AAAGCCGTGGATGGTGAAGC+TGG - chr7_1:64488715-64488734 None:intergenic 55.0%
!! CTGCTGGGGCTATTTCTGCT+TGG + chr7_1:64488747-64488766 Msa1030430:intron 55.0%
!! GGGGCTATTTCTGCTTGGGT+TGG + chr7_1:64488752-64488771 Msa1030430:intron 55.0%
CAGATGGCCAACACAACTCC+AGG - chr7_1:64488913-64488932 None:intergenic 55.0%
GGTGGCGTTGCATCTGCAAT+TGG - chr7_1:64489371-64489390 None:intergenic 55.0%
GGAGGGTGAATTTGGTCCCC+GGG + chr7_1:64484421-64484440 Msa1030430:intron 60.0%
GCGTGTCTGGTATCTGACGC+AGG - chr7_1:64484512-64484531 None:intergenic 60.0%
GGTGCATTCCTCCTTGCTGC+TGG + chr7_1:64485920-64485939 Msa1030430:CDS 60.0%
CCTTCGTACCAGCAGCAAGG+AGG - chr7_1:64485931-64485950 None:intergenic 60.0%
CCTCCTTGCTGCTGGTACGA+AGG + chr7_1:64485928-64485947 Msa1030430:CDS 60.0%
TCCCCTTCGTACCAGCAGCA+AGG - chr7_1:64485934-64485953 None:intergenic 60.0%
CTGCTGGTACGAAGGGGAAG+AGG + chr7_1:64485936-64485955 Msa1030430:CDS 60.0%
CATCAACCTCTCGGGTCTGC+TGG + chr7_1:64485989-64486008 Msa1030430:CDS 60.0%
TTTCCACCAGCAGACCCGAG+AGG - chr7_1:64485998-64486017 None:intergenic 60.0%
TCACCCAAGTGCTATCCGGG+GGG - chr7_1:64486723-64486742 None:intergenic 60.0%
GTCACCCAAGTGCTATCCGG+GGG - chr7_1:64486724-64486743 None:intergenic 60.0%
! GCTCTTTGGGGGGTAGCACT+TGG - chr7_1:64486847-64486866 None:intergenic 60.0%
GGACTGAGTGGCTCTTTGGG+GGG - chr7_1:64486857-64486876 None:intergenic 60.0%
CCGCTGCCTAAAGGACTGAG+TGG - chr7_1:64486869-64486888 None:intergenic 60.0%
CCATCCCTGCCTAGGTGTCA+CGG + chr7_1:64487621-64487640 Msa1030430:intron 60.0%
GACAGCGGTGCTTAGGGGAA+TGG - chr7_1:64487679-64487698 None:intergenic 60.0%
GACAACAAGTTTGCCGGCGC+CGG + chr7_1:64487714-64487733 Msa1030430:intron 60.0%
GCAACCCCCACATCGGAAAG+AGG - chr7_1:64487814-64487833 None:intergenic 60.0%
TGGTTAGCGTGTCTGGGAGG+AGG - chr7_1:64488683-64488702 None:intergenic 60.0%
CAACCTCTCGGGTCTGCTGG+TGG + chr7_1:64485992-64486011 Msa1030430:CDS 65.0%
ACCCCCCCCGGATAGCACTT+GGG + chr7_1:64486717-64486736 Msa1030430:intron 65.0%
ACCCAAGTGCTATCCGGGGG+GGG - chr7_1:64486721-64486740 None:intergenic 65.0%
CACCCAAGTGCTATCCGGGG+GGG - chr7_1:64486722-64486741 None:intergenic 65.0%
CCGTGACACCTAGGCAGGGA+TGG - chr7_1:64487624-64487643 None:intergenic 65.0%
!! TGACCTTCAAGCACCGGCGC+CGG - chr7_1:64487730-64487749 None:intergenic 65.0%
CCAGCGCAATAGGGGCTGAC+TGG - chr7_1:64487959-64487978 None:intergenic 65.0%
CCAGTCAGCCCCTATTGCGC+TGG + chr7_1:64487956-64487975 Msa1030430:intron 65.0%
CACCCCCCCCGGATAGCACT+TGG + chr7_1:64486716-64486735 Msa1030430:intron 70.0%
GGGGCCGTGACACCTAGGCA+GGG - chr7_1:64487628-64487647 None:intergenic 70.0%
AGGGGCCGTGACACCTAGGC+AGG - chr7_1:64487629-64487648 None:intergenic 70.0%
TGGGAGGGGCCGTGACACCT+AGG - chr7_1:64487633-64487652 None:intergenic 70.0%
!! TTGCCGGCGCCGGTGCTTGA+AGG + chr7_1:64487724-64487743 Msa1030430:intron 70.0%
CGGACGGGCAACCCCCACAT+CGG - chr7_1:64487821-64487840 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 64483823 64489784 64483823 ID=Msa1030430;Name=Msa1030430
chr7_1 mRNA 64483823 64489784 64483823 ID=Msa1030430-mRNA-1;Parent=Msa1030430;Name=Msa1030430-mRNA-1;_AED=0.05;_eAED=0.05;_QI=82|1|1|1|1|1|5|300|295
chr7_1 exon 64483823 64484183 64483823 ID=Msa1030430-mRNA-1:exon:14169;Parent=Msa1030430-mRNA-1
chr7_1 exon 64485183 64485297 64485183 ID=Msa1030430-mRNA-1:exon:14170;Parent=Msa1030430-mRNA-1
chr7_1 exon 64485843 64486018 64485843 ID=Msa1030430-mRNA-1:exon:14171;Parent=Msa1030430-mRNA-1
chr7_1 exon 64489081 64489176 64489081 ID=Msa1030430-mRNA-1:exon:14172;Parent=Msa1030430-mRNA-1
chr7_1 exon 64489263 64489784 64489263 ID=Msa1030430-mRNA-1:exon:14173;Parent=Msa1030430-mRNA-1
chr7_1 five_prime_UTR 64483823 64483904 64483823 ID=Msa1030430-mRNA-1:five_prime_utr;Parent=Msa1030430-mRNA-1
chr7_1 CDS 64483905 64484183 64483905 ID=Msa1030430-mRNA-1:cds;Parent=Msa1030430-mRNA-1
chr7_1 CDS 64485183 64485297 64485183 ID=Msa1030430-mRNA-1:cds;Parent=Msa1030430-mRNA-1
chr7_1 CDS 64485843 64486018 64485843 ID=Msa1030430-mRNA-1:cds;Parent=Msa1030430-mRNA-1
chr7_1 CDS 64489081 64489176 64489081 ID=Msa1030430-mRNA-1:cds;Parent=Msa1030430-mRNA-1
chr7_1 CDS 64489263 64489484 64489263 ID=Msa1030430-mRNA-1:cds;Parent=Msa1030430-mRNA-1
chr7_1 three_prime_UTR 64489485 64489784 64489485 ID=Msa1030430-mRNA-1:three_prime_utr;Parent=Msa1030430-mRNA-1
Gene Sequence

>Msa1030430

ATGGAAGTGAGTTTAGCCTCAACATGTTTGCCACTAACCTTCAACTCCAACAAGAAGACATTGTTAAACAATAACAATAACATTTTCCACTCTCAAATTCCATTTTCAACCAAACAAAGAACAACAATCGTTAACTCTATCAGACCCACTTTATCCTCTAACTGGCTTGTTTCCCATGATTTATCTGCCAAAACCGCTTCTCCATGGCTTCCCAAATTCGAAGAGCTTGATACTACCAACATGCTTCTCCGTCAAAGAATTGTTTTCTTGGGTTCTCAGGTGGATGATATGACTGCAGATTTTGTGATTAGTCAGCTTTTGTTTTTGGATGCTGATGATCCTACCAAAGATATCAAGTTGTTTATTAATTCACCTGGTGGTTCTATTACTGCTGGAATGGGAGTTTATGATGCCATGAAGTTATGCAAGGCAGATGTGTCTACCGTTTGCCTTGGACTTGCAGCATCCATGGGTGCATTCCTCCTTGCTGCTGGTACGAAGGGGAAGAGGTATTGTATGCCGAATTCCAGAGTTATGATTCATCAACCTCTCGGGTCTGCTGGTGGAAAAGCTACAGAGATGAGTATCCGTGCGAGAGAATTGATATATCACAAGATTAAGATAAACAAGATACTATCAAGAATTACAGGAAAACCTGAAGAGCAGATTGAATTGGACACGGATCGTGATAATTTTATGAATCCATGGGAAGCGAAAGAATACGGTTTGGTTGATGATGTTATTGATGACGGAAAACCAGGACTAGTTGCTCCAATTGCAGATGCAACGCCACCTCCAAAAACTCAGTTAAAGAATATATGGGAAATTGAAGGAAACTCAAAAGGTAAGAAGAAACTCCCCTCAGAGGAAACATCAACTGCTGTATGA

Protein sequence

>Msa1030430

MEVSLASTCLPLTFNSNKKTLLNNNNNIFHSQIPFSTKQRTTIVNSIRPTLSSNWLVSHDLSAKTASPWLPKFEELDTTNMLLRQRIVFLGSQVDDMTADFVISQLLFLDADDPTKDIKLFINSPGGSITAGMGVYDAMKLCKADVSTVCLGLAASMGAFLLAAGTKGKRYCMPNSRVMIHQPLGSAGGKATEMSIRARELIYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDDVIDDGKPGLVAPIADATPPPKTQLKNIWEIEGNSKGKKKLPSEETSTAV*