Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143380 | XP_003626001.1 | 79.677 | 433 | 3 | 3 | 1 | 348 | 1 | 433 | 0.0 | 666 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143380 | sp|Q8VZL6|SWC4_ARATH | 55.023 | 438 | 105 | 6 | 2 | 348 | 5 | 441 | 1.12e-150 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143380 | G7KTN9 | 79.677 | 433 | 3 | 3 | 1 | 348 | 1 | 433 | 0.0 | 666 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0143380 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa0143380 | 0.807975 | 3.887520e-50 | -8.615850e-47 |
| Msa0004920 | Msa0143380 | 0.820816 | 5.615088e-53 | -8.615850e-47 |
| Msa0008410 | Msa0143380 | 0.828062 | 1.107455e-54 | -8.615850e-47 |
| Msa0009760 | Msa0143380 | 0.809040 | 2.303486e-50 | -8.615850e-47 |
| Msa0011720 | Msa0143380 | 0.811931 | 5.469521e-51 | -8.615850e-47 |
| Msa0027390 | Msa0143380 | 0.829431 | 5.166681e-55 | -8.615850e-47 |
| Msa0032370 | Msa0143380 | 0.812982 | 3.223525e-51 | -8.615850e-47 |
| Msa0032840 | Msa0143380 | -0.816863 | 4.441731e-52 | -8.615850e-47 |
| Msa0036430 | Msa0143380 | 0.804835 | 1.784844e-49 | -8.615850e-47 |
| Msa0040450 | Msa0143380 | 0.807668 | 4.517097e-50 | -8.615850e-47 |
| Msa0044020 | Msa0143380 | 0.857653 | 1.409950e-62 | -8.615850e-47 |
| Msa0048000 | Msa0143380 | 0.833037 | 6.711260e-56 | -8.615850e-47 |
| Msa0050760 | Msa0143380 | 0.821161 | 4.678333e-53 | -8.615850e-47 |
| Msa0051770 | Msa0143380 | 0.808227 | 3.435403e-50 | -8.615850e-47 |
| Msa0057240 | Msa0143380 | 0.805077 | 1.589098e-49 | -8.615850e-47 |
| Msa0057520 | Msa0143380 | 0.806201 | 9.230356e-50 | -8.615850e-47 |
| Msa0077200 | Msa0143380 | 0.801791 | 7.622564e-49 | -8.615850e-47 |
| Msa0078650 | Msa0143380 | 0.803125 | 4.046818e-49 | -8.615850e-47 |
| Msa0081230 | Msa0143380 | 0.832562 | 8.808228e-56 | -8.615850e-47 |
| Msa0090590 | Msa0143380 | 0.837980 | 3.772679e-57 | -8.615850e-47 |
| Msa0096670 | Msa0143380 | 0.800635 | 1.314103e-48 | -8.615850e-47 |
| Msa0105420 | Msa0143380 | 0.815893 | 7.320301e-52 | -8.615850e-47 |
| Msa0110970 | Msa0143380 | 0.809990 | 1.439830e-50 | -8.615850e-47 |
| Msa0114540 | Msa0143380 | -0.847029 | 1.497756e-59 | -8.615850e-47 |
| Msa0120040 | Msa0143380 | -0.800484 | 1.410433e-48 | -8.615850e-47 |
| Msa0120330 | Msa0143380 | 0.808871 | 2.502769e-50 | -8.615850e-47 |
| Msa0123100 | Msa0143380 | 0.800133 | 1.662960e-48 | -8.615850e-47 |
| Msa0124340 | Msa0143380 | 0.812894 | 3.368730e-51 | -8.615850e-47 |
| Msa0126370 | Msa0143380 | 0.803034 | 4.226665e-49 | -8.615850e-47 |
| Msa0127820 | Msa0143380 | 0.835462 | 1.655105e-56 | -8.615850e-47 |
| Msa0140300 | Msa0143380 | 0.807697 | 4.453740e-50 | -8.615850e-47 |
| Msa0140780 | Msa0143380 | 0.801859 | 7.379369e-49 | -8.615850e-47 |
| Msa0140960 | Msa0143380 | 0.800053 | 1.725892e-48 | -8.615850e-47 |
| Msa0142480 | Msa0143380 | 0.800075 | 1.708682e-48 | -8.615850e-47 |
| Msa0143380 | Msa0145520 | 0.806410 | 8.339407e-50 | -8.615850e-47 |
| Msa0143380 | Msa0146260 | 0.807805 | 4.223846e-50 | -8.615850e-47 |
| Msa0143380 | Msa0148340 | 0.804100 | 2.540811e-49 | -8.615850e-47 |
| Msa0143380 | Msa0149560 | 0.801608 | 8.309772e-49 | -8.615850e-47 |
| Msa0143380 | Msa0151690 | 0.800799 | 1.216229e-48 | -8.615850e-47 |
| Msa0143380 | Msa0165300 | 0.828696 | 7.786076e-55 | -8.615850e-47 |
| Msa0143380 | Msa0168100 | 0.800748 | 1.245715e-48 | -8.615850e-47 |
| Msa0143380 | Msa0169860 | 0.801091 | 1.060586e-48 | -8.615850e-47 |
| Msa0143380 | Msa0172350 | 0.815312 | 9.862717e-52 | -8.615850e-47 |
| Msa0143380 | Msa0181360 | 0.815322 | 9.811196e-52 | -8.615850e-47 |
| Msa0143380 | Msa0183830 | 0.825354 | 4.908376e-54 | -8.615850e-47 |
| Msa0143380 | Msa0185590 | 0.824267 | 8.854555e-54 | -8.615850e-47 |
| Msa0143380 | Msa0186890 | 0.800805 | 1.213261e-48 | -8.615850e-47 |
| Msa0143380 | Msa0188680 | -0.814439 | 1.539500e-51 | -8.615850e-47 |
| Msa0143380 | Msa0191250 | 0.821933 | 3.102954e-53 | -8.615850e-47 |
| Msa0143380 | Msa0197930 | 0.826901 | 2.103278e-54 | -8.615850e-47 |
| Msa0143380 | Msa0203160 | 0.805867 | 1.084796e-49 | -8.615850e-47 |
| Msa0143380 | Msa0205850 | 0.842498 | 2.492968e-58 | -8.615850e-47 |
| Msa0143380 | Msa0210250 | 0.815098 | 1.100081e-51 | -8.615850e-47 |
| Msa0143380 | Msa0216240 | 0.806914 | 6.525398e-50 | -8.615850e-47 |
| Msa0143380 | Msa0219190 | 0.815729 | 7.961701e-52 | -8.615850e-47 |
| Msa0143380 | Msa0220580 | 0.814026 | 1.900020e-51 | -8.615850e-47 |
| Msa0143380 | Msa0221060 | 0.803897 | 2.798849e-49 | -8.615850e-47 |
| Msa0143380 | Msa0222920 | 0.802266 | 6.086452e-49 | -8.615850e-47 |
| Msa0143380 | Msa0225180 | 0.813957 | 1.967417e-51 | -8.615850e-47 |
| Msa0143380 | Msa0227510 | 0.808165 | 3.540360e-50 | -8.615850e-47 |
| Msa0143380 | Msa0230550 | -0.814455 | 1.527698e-51 | -8.615850e-47 |
| Msa0143380 | Msa0235890 | 0.823286 | 1.503078e-53 | -8.615850e-47 |
| Msa0143380 | Msa0236980 | 0.806729 | 7.142268e-50 | -8.615850e-47 |
| Msa0143380 | Msa0239450 | 0.804878 | 1.748852e-49 | -8.615850e-47 |
| Msa0143380 | Msa0239570 | 0.807670 | 4.512243e-50 | -8.615850e-47 |
| Msa0143380 | Msa0242480 | 0.808510 | 2.989557e-50 | -8.615850e-47 |
| Msa0143380 | Msa0243690 | 0.803702 | 3.072451e-49 | -8.615850e-47 |
| Msa0143380 | Msa0243710 | 0.821679 | 3.550918e-53 | -8.615850e-47 |
| Msa0143380 | Msa0244860 | 0.809385 | 1.942740e-50 | -8.615850e-47 |
| Msa0143380 | Msa0246430 | 0.810741 | 9.912938e-51 | -8.615850e-47 |
| Msa0143380 | Msa0248980 | 0.800732 | 1.255335e-48 | -8.615850e-47 |
| Msa0143380 | Msa0250670 | 0.819914 | 9.044115e-53 | -8.615850e-47 |
| Msa0143380 | Msa0259560 | 0.850220 | 1.954842e-60 | -8.615850e-47 |
| Msa0143380 | Msa0260810 | 0.831629 | 1.497777e-55 | -8.615850e-47 |
| Msa0143380 | Msa0264350 | 0.806174 | 9.348846e-50 | -8.615850e-47 |
| Msa0143380 | Msa0264930 | 0.808584 | 2.883212e-50 | -8.615850e-47 |
| Msa0143380 | Msa0267760 | 0.809664 | 1.692448e-50 | -8.615850e-47 |
| Msa0143380 | Msa0267870 | 0.819961 | 8.821936e-53 | -8.615850e-47 |
| Msa0143380 | Msa0270220 | -0.821110 | 4.807016e-53 | -8.615850e-47 |
| Msa0143380 | Msa0271810 | 0.806670 | 7.349512e-50 | -8.615850e-47 |
| Msa0143380 | Msa0274360 | 0.807111 | 5.930026e-50 | -8.615850e-47 |
| Msa0143380 | Msa0275400 | -0.800244 | 1.578366e-48 | -8.615850e-47 |
| Msa0143380 | Msa0276920 | 0.804443 | 2.154969e-49 | -8.615850e-47 |
| Msa0143380 | Msa0282250 | 0.808369 | 3.203092e-50 | -8.615850e-47 |
| Msa0143380 | Msa0282890 | 0.800646 | 1.306867e-48 | -8.615850e-47 |
| Msa0143380 | Msa0287310 | 0.832307 | 1.018777e-55 | -8.615850e-47 |
| Msa0143380 | Msa0287650 | 0.843323 | 1.503569e-58 | -8.615850e-47 |
| Msa0143380 | Msa0289400 | 0.803768 | 2.977567e-49 | -8.615850e-47 |
| Msa0143380 | Msa0296760 | 0.812686 | 3.741838e-51 | -8.615850e-47 |
| Msa0143380 | Msa0298240 | 0.815257 | 1.014116e-51 | -8.615850e-47 |
| Msa0143380 | Msa0299730 | 0.815937 | 7.156745e-52 | -8.615850e-47 |
| Msa0143380 | Msa0299890 | 0.803851 | 2.861584e-49 | -8.615850e-47 |
| Msa0143380 | Msa0300120 | 0.810866 | 9.313235e-51 | -8.615850e-47 |
| Msa0143380 | Msa0302980 | 0.805629 | 1.217155e-49 | -8.615850e-47 |
| Msa0143380 | Msa0305700 | 0.802225 | 6.205277e-49 | -8.615850e-47 |
| Msa0143380 | Msa0307830 | -0.825451 | 4.654726e-54 | -8.615850e-47 |
| Msa0143380 | Msa0310410 | 0.814665 | 1.371993e-51 | -8.615850e-47 |
| Msa0143380 | Msa0311700 | 0.846527 | 2.053527e-59 | -8.615850e-47 |
| Msa0143380 | Msa0311860 | 0.811192 | 7.916964e-51 | -8.615850e-47 |
| Msa0143380 | Msa0314210 | 0.825219 | 5.281131e-54 | -8.615850e-47 |
| Msa0143380 | Msa0316800 | 0.803673 | 3.116492e-49 | -8.615850e-47 |
| Msa0143380 | Msa0317280 | 0.813228 | 2.845895e-51 | -8.615850e-47 |
| Msa0143380 | Msa0317730 | 0.825037 | 5.832847e-54 | -8.615850e-47 |
| Msa0143380 | Msa0321190 | 0.808562 | 2.914262e-50 | -8.615850e-47 |
| Msa0143380 | Msa0323180 | 0.813332 | 2.700959e-51 | -8.615850e-47 |
| Msa0143380 | Msa0323610 | 0.800021 | 1.752344e-48 | -8.615850e-47 |
| Msa0143380 | Msa0325850 | 0.826316 | 2.900327e-54 | -8.615850e-47 |
| Msa0143380 | Msa0327410 | 0.831641 | 1.487641e-55 | -8.615850e-47 |
| Msa0143380 | Msa0333390 | 0.806786 | 6.946627e-50 | -8.615850e-47 |
| Msa0143380 | Msa0333920 | 0.828525 | 8.566013e-55 | -8.615850e-47 |
| Msa0143380 | Msa0334040 | 0.830734 | 2.486021e-55 | -8.615850e-47 |
| Msa0143380 | Msa0335040 | 0.831301 | 1.803790e-55 | -8.615850e-47 |
| Msa0143380 | Msa0338110 | 0.811173 | 7.991251e-51 | -8.615850e-47 |
| Msa0143380 | Msa0347360 | 0.812661 | 3.789967e-51 | -8.615850e-47 |
| Msa0143380 | Msa0351380 | 0.808079 | 3.693444e-50 | -8.615850e-47 |
| Msa0143380 | Msa0356890 | -0.801417 | 9.092440e-49 | -8.615850e-47 |
| Msa0143380 | Msa0369570 | 0.806572 | 7.706615e-50 | -8.615850e-47 |
| Msa0143380 | Msa0369850 | 0.823031 | 1.723473e-53 | -8.615850e-47 |
| Msa0143380 | Msa0371560 | 0.814602 | 1.417214e-51 | -8.615850e-47 |
| Msa0143380 | Msa0372660 | 0.810301 | 1.234095e-50 | -8.615850e-47 |
| Msa0143380 | Msa0393680 | 0.807608 | 4.652216e-50 | -8.615850e-47 |
| Msa0143380 | Msa0410500 | 0.800820 | 1.204742e-48 | -8.615850e-47 |
| Msa0143380 | Msa0410650 | 0.805930 | 1.052365e-49 | -8.615850e-47 |
| Msa0143380 | Msa0413450 | 0.812941 | 3.291177e-51 | -8.615850e-47 |
| Msa0143380 | Msa0414170 | 0.805863 | 1.086902e-49 | -8.615850e-47 |
| Msa0143380 | Msa0415810 | 0.821566 | 3.772455e-53 | -8.615850e-47 |
| Msa0143380 | Msa0419820 | 0.806661 | 7.381999e-50 | -8.615850e-47 |
| Msa0143380 | Msa0426330 | 0.848247 | 6.919614e-60 | -8.615850e-47 |
| Msa0143380 | Msa0428170 | 0.821606 | 3.692938e-53 | -8.615850e-47 |
| Msa0143380 | Msa0430820 | 0.826833 | 2.183448e-54 | -8.615850e-47 |
| Msa0143380 | Msa0438590 | 0.804881 | 1.746070e-49 | -8.615850e-47 |
| Msa0143380 | Msa0443880 | 0.815087 | 1.106474e-51 | -8.615850e-47 |
| Msa0143380 | Msa0449830 | 0.806260 | 8.970164e-50 | -8.615850e-47 |
| Msa0143380 | Msa0464900 | 0.834069 | 3.709636e-56 | -8.615850e-47 |
| Msa0143380 | Msa0466390 | 0.805047 | 1.611825e-49 | -8.615850e-47 |
| Msa0143380 | Msa0473080 | 0.823706 | 1.199188e-53 | -8.615850e-47 |
| Msa0143380 | Msa0473240 | 0.802022 | 6.834059e-49 | -8.615850e-47 |
| Msa0143380 | Msa0484780 | 0.824216 | 9.100422e-54 | -8.615850e-47 |
| Msa0143380 | Msa0490750 | 0.803759 | 2.991105e-49 | -8.615850e-47 |
| Msa0143380 | Msa0507680 | 0.803611 | 3.210222e-49 | -8.615850e-47 |
| Msa0143380 | Msa0509610 | 0.823682 | 1.214518e-53 | -8.615850e-47 |
| Msa0143380 | Msa0517330 | 0.800355 | 1.498370e-48 | -8.615850e-47 |
| Msa0143380 | Msa0521540 | 0.806792 | 6.926785e-50 | -8.615850e-47 |
| Msa0143380 | Msa0521880 | 0.825998 | 3.452931e-54 | -8.615850e-47 |
| Msa0143380 | Msa0523460 | 0.832684 | 8.213722e-56 | -8.615850e-47 |
| Msa0143380 | Msa0526710 | 0.805978 | 1.028259e-49 | -8.615850e-47 |
| Msa0143380 | Msa0526890 | 0.848898 | 4.571141e-60 | -8.615850e-47 |
| Msa0143380 | Msa0527550 | 0.809284 | 2.041806e-50 | -8.615850e-47 |
| Msa0143380 | Msa0535030 | 0.812461 | 4.190417e-51 | -8.615850e-47 |
| Msa0143380 | Msa0535060 | 0.814957 | 1.182099e-51 | -8.615850e-47 |
| Msa0143380 | Msa0541860 | 0.801396 | 9.183606e-49 | -8.615850e-47 |
| Msa0143380 | Msa0545070 | 0.800193 | 1.616893e-48 | -8.615850e-47 |
| Msa0143380 | Msa0547140 | 0.807420 | 5.098879e-50 | -8.615850e-47 |
| Msa0143380 | Msa0552810 | 0.808496 | 3.009605e-50 | -8.615850e-47 |
| Msa0143380 | Msa0560470 | 0.833407 | 5.429226e-56 | -8.615850e-47 |
| Msa0143380 | Msa0568820 | 0.805403 | 1.357513e-49 | -8.615850e-47 |
| Msa0143380 | Msa0577220 | 0.823615 | 1.259085e-53 | -8.615850e-47 |
| Msa0143380 | Msa0587940 | 0.800500 | 1.399866e-48 | -8.615850e-47 |
| Msa0143380 | Msa0591770 | 0.809187 | 2.141816e-50 | -8.615850e-47 |
| Msa0143380 | Msa0598460 | 0.800166 | 1.637517e-48 | -8.615850e-47 |
| Msa0143380 | Msa0601850 | 0.816622 | 5.029545e-52 | -8.615850e-47 |
| Msa0143380 | Msa0619070 | 0.807154 | 5.804656e-50 | -8.615850e-47 |
| Msa0143380 | Msa0619980 | 0.807003 | 6.250500e-50 | -8.615850e-47 |
| Msa0143380 | Msa0625280 | 0.800383 | 1.478865e-48 | -8.615850e-47 |
| Msa0143380 | Msa0626220 | 0.801397 | 9.179553e-49 | -8.615850e-47 |
| Msa0143380 | Msa0638280 | 0.809634 | 1.717364e-50 | -8.615850e-47 |
| Msa0143380 | Msa0638320 | 0.823467 | 1.363292e-53 | -8.615850e-47 |
| Msa0143380 | Msa0639120 | 0.817560 | 3.094766e-52 | -8.615850e-47 |
| Msa0143380 | Msa0641190 | 0.810516 | 1.108641e-50 | -8.615850e-47 |
| Msa0143380 | Msa0645050 | 0.801068 | 1.071764e-48 | -8.615850e-47 |
| Msa0143380 | Msa0647130 | 0.800300 | 1.537404e-48 | -8.615850e-47 |
| Msa0143380 | Msa0649980 | 0.826663 | 2.397347e-54 | -8.615850e-47 |
| Msa0143380 | Msa0663900 | 0.827964 | 1.169612e-54 | -8.615850e-47 |
| Msa0143380 | Msa0667050 | 0.803341 | 3.650928e-49 | -8.615850e-47 |
| Msa0143380 | Msa0669850 | 0.812394 | 4.335114e-51 | -8.615850e-47 |
| Msa0143380 | Msa0677270 | 0.816290 | 5.969132e-52 | -8.615850e-47 |
| Msa0143380 | Msa0682330 | 0.806196 | 9.252123e-50 | -8.615850e-47 |
| Msa0143380 | Msa0682550 | 0.807330 | 5.327394e-50 | -8.615850e-47 |
| Msa0143380 | Msa0683510 | 0.808357 | 3.222818e-50 | -8.615850e-47 |
| Msa0143380 | Msa0692840 | 0.806629 | 7.497230e-50 | -8.615850e-47 |
| Msa0143380 | Msa0693380 | 0.818471 | 1.926351e-52 | -8.615850e-47 |
| Msa0143380 | Msa0702570 | 0.804751 | 1.858554e-49 | -8.615850e-47 |
| Msa0143380 | Msa0703230 | 0.804449 | 2.148841e-49 | -8.615850e-47 |
| Msa0143380 | Msa0706370 | 0.817111 | 3.905484e-52 | -8.615850e-47 |
| Msa0143380 | Msa0720820 | 0.814102 | 1.828226e-51 | -8.615850e-47 |
| Msa0143380 | Msa0723990 | 0.806441 | 8.212889e-50 | -8.615850e-47 |
| Msa0143380 | Msa0724830 | 0.808038 | 3.768690e-50 | -8.615850e-47 |
| Msa0143380 | Msa0739120 | 0.835773 | 1.380643e-56 | -8.615850e-47 |
| Msa0143380 | Msa0740740 | 0.800150 | 1.649192e-48 | -8.615850e-47 |
| Msa0143380 | Msa0741900 | 0.848707 | 5.163510e-60 | -8.615850e-47 |
| Msa0143380 | Msa0743200 | 0.808605 | 2.853542e-50 | -8.615850e-47 |
| Msa0143380 | Msa0743800 | 0.808413 | 3.135890e-50 | -8.615850e-47 |
| Msa0143380 | Msa0750350 | 0.821256 | 4.448057e-53 | -8.615850e-47 |
| Msa0143380 | Msa0754720 | -0.832540 | 8.919770e-56 | -8.615850e-47 |
| Msa0143380 | Msa0756630 | -0.831759 | 1.391433e-55 | -8.615850e-47 |
| Msa0143380 | Msa0760380 | 0.811855 | 5.681415e-51 | -8.615850e-47 |
| Msa0143380 | Msa0761940 | 0.816965 | 4.212295e-52 | -8.615850e-47 |
| Msa0143380 | Msa0762210 | 0.803895 | 2.802622e-49 | -8.615850e-47 |
| Msa0143380 | Msa0767220 | 0.816572 | 5.160447e-52 | -8.615850e-47 |
| Msa0143380 | Msa0787260 | 0.826065 | 3.327169e-54 | -8.615850e-47 |
| Msa0143380 | Msa0788710 | 0.810122 | 1.348519e-50 | -8.615850e-47 |
| Msa0143380 | Msa0790390 | -0.813407 | 2.599648e-51 | -8.615850e-47 |
| Msa0143380 | Msa0798070 | 0.801276 | 9.719306e-49 | -8.615850e-47 |
| Msa0143380 | Msa0804680 | 0.803648 | 3.152891e-49 | -8.615850e-47 |
| Msa0143380 | Msa0810020 | 0.817793 | 2.742056e-52 | -8.615850e-47 |
| Msa0143380 | Msa0822990 | 0.838170 | 3.370562e-57 | -8.615850e-47 |
| Msa0143380 | Msa0829620 | 0.819763 | 9.789960e-53 | -8.615850e-47 |
| Msa0143380 | Msa0840260 | 0.826519 | 2.594162e-54 | -8.615850e-47 |
| Msa0143380 | Msa0841940 | 0.820386 | 7.050410e-53 | -8.615850e-47 |
| Msa0143380 | Msa0846140 | 0.802794 | 4.737732e-49 | -8.615850e-47 |
| Msa0143380 | Msa0850960 | 0.809788 | 1.591225e-50 | -8.615850e-47 |
| Msa0143380 | Msa0862100 | 0.821569 | 3.765305e-53 | -8.615850e-47 |
| Msa0143380 | Msa0863370 | 0.832557 | 8.830425e-56 | -8.615850e-47 |
| Msa0143380 | Msa0867890 | 0.815990 | 6.962761e-52 | -8.615850e-47 |
| Msa0143380 | Msa0869100 | 0.815992 | 6.958047e-52 | -8.615850e-47 |
| Msa0143380 | Msa0872310 | 0.831314 | 1.790387e-55 | -8.615850e-47 |
| Msa0143380 | Msa0875620 | 0.815516 | 8.882365e-52 | -8.615850e-47 |
| Msa0143380 | Msa0882510 | 0.818052 | 2.397370e-52 | -8.615850e-47 |
| Msa0143380 | Msa0893810 | 0.825316 | 5.009605e-54 | -8.615850e-47 |
| Msa0143380 | Msa0896220 | 0.801845 | 7.428989e-49 | -8.615850e-47 |
| Msa0143380 | Msa0896750 | 0.821234 | 4.500738e-53 | -8.615850e-47 |
| Msa0143380 | Msa0899230 | 0.815262 | 1.011423e-51 | -8.615850e-47 |
| Msa0143380 | Msa0905550 | 0.806708 | 7.213042e-50 | -8.615850e-47 |
| Msa0143380 | Msa0908050 | 0.812707 | 3.702699e-51 | -8.615850e-47 |
| Msa0143380 | Msa0908170 | 0.842361 | 2.710598e-58 | -8.615850e-47 |
| Msa0143380 | Msa0923330 | 0.804843 | 1.778537e-49 | -8.615850e-47 |
| Msa0143380 | Msa0930780 | 0.822484 | 2.311735e-53 | -8.615850e-47 |
| Msa0143380 | Msa0933230 | 0.836070 | 1.160659e-56 | -8.615850e-47 |
| Msa0143380 | Msa0933310 | 0.824551 | 7.592177e-54 | -8.615850e-47 |
| Msa0143380 | Msa0937550 | 0.815159 | 1.066313e-51 | -8.615850e-47 |
| Msa0143380 | Msa0937670 | 0.819225 | 1.298937e-52 | -8.615850e-47 |
| Msa0143380 | Msa0959010 | 0.848639 | 5.392783e-60 | -8.615850e-47 |
| Msa0143380 | Msa0960160 | 0.802924 | 4.454117e-49 | -8.615850e-47 |
| Msa0143380 | Msa0961690 | 0.807017 | 6.207657e-50 | -8.615850e-47 |
| Msa0143380 | Msa0967370 | 0.809154 | 2.176892e-50 | -8.615850e-47 |
| Msa0143380 | Msa0971090 | 0.821663 | 3.582004e-53 | -8.615850e-47 |
| Msa0143380 | Msa0980940 | 0.809058 | 2.282838e-50 | -8.615850e-47 |
| Msa0143380 | Msa0986920 | 0.820365 | 7.129883e-53 | -8.615850e-47 |
| Msa0143380 | Msa0993530 | 0.849153 | 3.882868e-60 | -8.615850e-47 |
| Msa0143380 | Msa0996080 | 0.811616 | 6.405233e-51 | -8.615850e-47 |
| Msa0143380 | Msa1004420 | 0.803418 | 3.520166e-49 | -8.615850e-47 |
| Msa0143380 | Msa1009000 | 0.805209 | 1.490496e-49 | -8.615850e-47 |
| Msa0143380 | Msa1012370 | 0.803070 | 4.155044e-49 | -8.615850e-47 |
| Msa0143380 | Msa1026760 | 0.800904 | 1.157877e-48 | -8.615850e-47 |
| Msa0143380 | Msa1026790 | 0.800041 | 1.736096e-48 | -8.615850e-47 |
| Msa0143380 | Msa1033560 | 0.812311 | 4.519476e-51 | -8.615850e-47 |
| Msa0143380 | Msa1037700 | -0.812468 | 4.175211e-51 | -8.615850e-47 |
| Msa0143380 | Msa1037920 | 0.805819 | 1.110255e-49 | -8.615850e-47 |
| Msa0143380 | Msa1040890 | 0.866904 | 2.026740e-65 | -8.615850e-47 |
| Msa0143380 | Msa1041530 | 0.810635 | 1.044970e-50 | -8.615850e-47 |
| Msa0143380 | Msa1046300 | 0.801160 | 1.026482e-48 | -8.615850e-47 |
| Msa0143380 | Msa1063950 | 0.804570 | 2.027194e-49 | -8.615850e-47 |
| Msa0143380 | Msa1078710 | 0.818497 | 1.900933e-52 | -8.615850e-47 |
| Msa0143380 | Msa1079590 | 0.804145 | 2.485909e-49 | -8.615850e-47 |
| Msa0143380 | Msa1080160 | 0.824854 | 6.441457e-54 | -8.615850e-47 |
| Msa0143380 | Msa1081570 | 0.802749 | 4.839262e-49 | -8.615850e-47 |
| Msa0143380 | Msa1082500 | 0.820914 | 5.332360e-53 | -8.615850e-47 |
| Msa0143380 | Msa1085200 | 0.801012 | 1.100354e-48 | -8.615850e-47 |
| Msa0143380 | Msa1097840 | 0.812996 | 3.199518e-51 | -8.615850e-47 |
| Msa0143380 | Msa1098560 | 0.821179 | 4.633448e-53 | -8.615850e-47 |
| Msa0143380 | Msa1102770 | 0.807976 | 3.885526e-50 | -8.615850e-47 |
| Msa0143380 | Msa1111180 | 0.800604 | 1.333016e-48 | -8.615850e-47 |
| Msa0143380 | Msa1111700 | 0.806345 | 8.605869e-50 | -8.615850e-47 |
| Msa0143380 | Msa1123880 | 0.801886 | 7.285807e-49 | -8.615850e-47 |
| Msa0143380 | Msa1127140 | 0.807237 | 5.576697e-50 | -8.615850e-47 |
| Msa0143380 | Msa1127270 | 0.804042 | 2.611794e-49 | -8.615850e-47 |
| Msa0143380 | Msa1127830 | 0.820169 | 7.904099e-53 | -8.615850e-47 |
| Msa0143380 | Msa1127890 | 0.820939 | 5.262466e-53 | -8.615850e-47 |
| Msa0143380 | Msa1130210 | -0.814944 | 1.189936e-51 | -8.615850e-47 |
| Msa0143380 | Msa1133710 | 0.822513 | 2.275409e-53 | -8.615850e-47 |
| Msa0143380 | Msa1137600 | 0.802433 | 5.622146e-49 | -8.615850e-47 |
| Msa0143380 | Msa1139810 | 0.815473 | 9.082193e-52 | -8.615850e-47 |
| Msa0143380 | Msa1140690 | 0.824371 | 8.371507e-54 | -8.615850e-47 |
| Msa0143380 | Msa1160400 | 0.818881 | 1.554842e-52 | -8.615850e-47 |
| Msa0143380 | Msa1166400 | 0.801453 | 8.939514e-49 | -8.615850e-47 |
| Msa0143380 | Msa1168160 | 0.808935 | 2.425825e-50 | -8.615850e-47 |
| Msa0143380 | Msa1170280 | 0.824041 | 1.000734e-53 | -8.615850e-47 |
| Msa0143380 | Msa1172670 | 0.801635 | 8.205106e-49 | -8.615850e-47 |
| Msa0143380 | Msa1174100 | 0.803109 | 4.077455e-49 | -8.615850e-47 |
| Msa0143380 | Msa1179940 | 0.808458 | 3.067339e-50 | -8.615850e-47 |
| Msa0143380 | Msa1179970 | 0.810601 | 1.062771e-50 | -8.615850e-47 |
| Msa0143380 | Msa1185540 | 0.806050 | 9.928161e-50 | -8.615850e-47 |
| Msa0143380 | Msa1187840 | 0.812328 | 4.481040e-51 | -8.615850e-47 |
| Msa0143380 | Msa1197060 | 0.800673 | 1.290733e-48 | -8.615850e-47 |
| Msa0143380 | Msa1206020 | 0.811749 | 5.992305e-51 | -8.615850e-47 |
| Msa0143380 | Msa1214880 | 0.845865 | 3.109692e-59 | -8.615850e-47 |
| Msa0143380 | Msa1214890 | 0.850550 | 1.579442e-60 | -8.615850e-47 |
| Msa0143380 | Msa1217810 | 0.804425 | 2.173437e-49 | -8.615850e-47 |
| Msa0143380 | Msa1217860 | 0.808211 | 3.461501e-50 | -8.615850e-47 |
| Msa0143380 | Msa1218590 | 0.803788 | 2.948666e-49 | -8.615850e-47 |
| Msa0143380 | Msa1224830 | 0.800980 | 1.117109e-48 | -8.615850e-47 |
| Msa0143380 | Msa1224840 | 0.802318 | 5.937497e-49 | -8.615850e-47 |
| Msa0143380 | Msa1228290 | 0.819381 | 1.196709e-52 | -8.615850e-47 |
| Msa0143380 | Msa1228890 | 0.816538 | 5.251255e-52 | -8.615850e-47 |
| Msa0143380 | Msa1237030 | 0.802550 | 5.320244e-49 | -8.615850e-47 |
| Msa0143380 | Msa1240310 | 0.801001 | 1.106476e-48 | -8.615850e-47 |
| Msa0143380 | Msa1254510 | 0.808334 | 3.259922e-50 | -8.615850e-47 |
| Msa0143380 | Msa1254710 | 0.802249 | 6.135032e-49 | -8.615850e-47 |
| Msa0143380 | Msa1267840 | 0.801058 | 1.076802e-48 | -8.615850e-47 |
| Msa0143380 | Msa1278840 | 0.823673 | 1.220719e-53 | -8.615850e-47 |
| Msa0143380 | Msa1280560 | 0.801405 | 9.143855e-49 | -8.615850e-47 |
| Msa0143380 | Msa1283170 | 0.807799 | 4.236782e-50 | -8.615850e-47 |
| Msa0143380 | Msa1300860 | 0.824258 | 8.897001e-54 | -8.615850e-47 |
| Msa0143380 | Msa1303250 | 0.806905 | 6.555940e-50 | -8.615850e-47 |
| Msa0143380 | Msa1307950 | 0.802378 | 5.771422e-49 | -8.615850e-47 |
| Msa0143380 | Msa1314340 | 0.823507 | 1.334386e-53 | -8.615850e-47 |
| Msa0143380 | Msa1318240 | 0.834690 | 2.591133e-56 | -8.615850e-47 |
| Msa0143380 | Msa1320740 | 0.824179 | 9.284046e-54 | -8.615850e-47 |
| Msa0143380 | Msa1328850 | 0.818515 | 1.882874e-52 | -8.615850e-47 |
| Msa0143380 | Msa1331910 | 0.856795 | 2.526556e-62 | -8.615850e-47 |
| Msa0143380 | Msa1331920 | 0.844732 | 6.300929e-59 | -8.615850e-47 |
| Msa0143380 | Msa1337730 | 0.800816 | 1.206884e-48 | -8.615850e-47 |
| Msa0143380 | Msa1340020 | 0.804526 | 2.070568e-49 | -8.615850e-47 |
| Msa0143380 | Msa1340650 | 0.807827 | 4.178521e-50 | -8.615850e-47 |
| Msa0143380 | Msa1343070 | 0.800559 | 1.361637e-48 | -8.615850e-47 |
| Msa0143380 | Msa1344850 | 0.800060 | 1.720355e-48 | -8.615850e-47 |
| Msa0143380 | Msa1346370 | 0.804510 | 2.086948e-49 | -8.615850e-47 |
| Msa0143380 | Msa1348360 | 0.813727 | 2.210668e-51 | -8.615850e-47 |
| Msa0143380 | Msa1362510 | 0.837823 | 4.140298e-57 | -8.615850e-47 |
| Msa0143380 | Msa1363890 | 0.814394 | 1.575665e-51 | -8.615850e-47 |
| Msa0143380 | Msa1367880 | 0.808114 | 3.631062e-50 | -8.615850e-47 |
| Msa0143380 | Msa1373330 | 0.806010 | 1.012389e-49 | -8.615850e-47 |
| Msa0143380 | Msa1374040 | 0.801738 | 7.813209e-49 | -8.615850e-47 |
| Msa0143380 | Msa1384350 | 0.800973 | 1.120836e-48 | -8.615850e-47 |
| Msa0143380 | Msa1385670 | 0.802940 | 4.419017e-49 | -8.615850e-47 |
| Msa0143380 | Msa1390310 | 0.818687 | 1.721197e-52 | -8.615850e-47 |
| Msa0143380 | Msa1398860 | 0.815305 | 9.894561e-52 | -8.615850e-47 |
| Msa0143380 | Msa1402270 | 0.802452 | 5.572514e-49 | -8.615850e-47 |
| Msa0143380 | Msa1403580 | -0.815828 | 7.568662e-52 | -8.615850e-47 |
| Msa0143380 | Msa1404540 | 0.832416 | 9.574135e-56 | -8.615850e-47 |
| Msa0143380 | Msa1404730 | 0.819427 | 1.168179e-52 | -8.615850e-47 |
| Msa0143380 | Msa1408760 | -0.815110 | 1.093372e-51 | -8.615850e-47 |
| Msa0143380 | Msa1408790 | 0.802020 | 6.839329e-49 | -8.615850e-47 |
| Msa0143380 | Msa1416390 | 0.825423 | 4.725573e-54 | -8.615850e-47 |
| Msa0143380 | Msa1420060 | 0.820622 | 6.221876e-53 | -8.615850e-47 |
| Msa0143380 | Msa1427060 | 0.802847 | 4.620053e-49 | -8.615850e-47 |
| Msa0143380 | Msa1429680 | 0.804303 | 2.305051e-49 | -8.615850e-47 |
| Msa0143380 | Msa1430240 | 0.811524 | 6.706535e-51 | -8.615850e-47 |
| Msa0143380 | Msa1431060 | 0.823431 | 1.390086e-53 | -8.615850e-47 |
| Msa0143380 | Msa1439960 | 0.805082 | 1.585157e-49 | -8.615850e-47 |
| Msa0143380 | Msa1440600 | 0.821109 | 4.808452e-53 | -8.615850e-47 |
| Msa0143380 | Msa1443290 | -0.820318 | 7.307970e-53 | -8.615850e-47 |
| Msa0143380 | Msa1445790 | 0.800589 | 1.342508e-48 | -8.615850e-47 |
| Msa0143380 | Msa1459180 | 0.822569 | 2.208869e-53 | -8.615850e-47 |
| Msa0143380 | Msa1460020 | 0.823680 | 1.215756e-53 | -8.615850e-47 |
| Msa0143380 | Msa1466460 | 0.817003 | 4.129916e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143380 | MtrunA17_Chr7g0270251 | 79.677 | 433 | 3 | 3 | 1 | 348 | 1 | 433 | 0.0 | 666 |
| Msa0143380 | MtrunA17_Chr1g0194351 | 64.183 | 349 | 79 | 4 | 25 | 327 | 60 | 408 | 1.40e-148 | 425 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143380 | AT2G47210.3 | 55.023 | 438 | 105 | 6 | 2 | 348 | 5 | 441 | 1.14e-151 | 434 |
| Msa0143380 | AT2G47210.1 | 55.023 | 438 | 105 | 6 | 2 | 348 | 5 | 441 | 1.14e-151 | 434 |
| Msa0143380 | AT2G47210.2 | 55.023 | 438 | 105 | 6 | 2 | 348 | 5 | 441 | 1.14e-151 | 434 |
Find 121 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTAAGCATCATATTTAAT+TGG | 0.150139 | 1_4:-2308385 | Msa0143380:three_prime_UTR |
| TATACCAATATACCTGTTTC+TGG | 0.156332 | 1_4:+2309205 | None:intergenic |
| TCATATTTAATTGGGTTAAA+TGG | 0.190407 | 1_4:-2308376 | Msa0143380:intron |
| AATATCCTTCGCGTCCATTT+AGG | 0.193541 | 1_4:+2312919 | None:intergenic |
| GAGAAATTGAGAGGGAAAAT+TGG | 0.199779 | 1_4:-2313005 | Msa0143380:five_prime_UTR |
| ATTCCCGATTCGTTGAATTT+TGG | 0.213340 | 1_4:-2308783 | Msa0143380:CDS |
| CTTGCCAGGGCTGCATCTTC+CGG | 0.253582 | 1_4:-2311345 | Msa0143380:CDS |
| TTTCTCTTGTTGTCTTGTTT+GGG | 0.260220 | 1_4:+2311086 | None:intergenic |
| ACCTTTCAATTCAATTCAAT+TGG | 0.280829 | 1_4:+2312963 | None:intergenic |
| ATTTCTTGTGAAACATTATA+TGG | 0.283878 | 1_4:+2311141 | None:intergenic |
| CCTGCCATTTGAGCGAGTTT+TGG | 0.294499 | 1_4:-2308079 | Msa0143380:three_prime_UTR |
| TCGGACTGTAGAGGAGTTAA+AGG | 0.299488 | 1_4:-2311583 | Msa0143380:CDS |
| TGAAGGAGGTAAGGTGTTAG+AGG | 0.312654 | 1_4:+2307880 | None:intergenic |
| TTTGACTTCACCTTAATGAT+AGG | 0.315672 | 1_4:+2311306 | None:intergenic |
| TTGCCAGGGCTGCATCTTCC+GGG | 0.316334 | 1_4:-2311344 | Msa0143380:CDS |
| ATATCCTTCGCGTCCATTTA+GGG | 0.321840 | 1_4:+2312920 | None:intergenic |
| AGGCGAAAGGGTTGGCAAAA+AGG | 0.324610 | 1_4:-2308656 | Msa0143380:CDS |
| TGTTCCTATGAAACCCTAAA+TGG | 0.331803 | 1_4:-2312933 | Msa0143380:exon |
| CCTTTCAATTCAATTCAATT+GGG | 0.345159 | 1_4:+2312964 | None:intergenic |
| TGCAACACATCCTATCATTA+AGG | 0.347399 | 1_4:-2311316 | Msa0143380:intron |
| ATGGACGCGAAGGATATTCT+TGG | 0.347443 | 1_4:-2312914 | Msa0143380:CDS |
| GCGTCCATTTAGGGTTTCAT+AGG | 0.370836 | 1_4:+2312929 | None:intergenic |
| CACAAGAAATGGAGCGAAAA+CGG | 0.373448 | 1_4:-2311128 | Msa0143380:CDS |
| ATATAATGTTTCACAAGAAA+TGG | 0.380297 | 1_4:-2311139 | Msa0143380:CDS |
| TTTAGCTACCTTGTTGTACT+TGG | 0.384441 | 1_4:+2312260 | None:intergenic |
| TCCCTGTCATGTAGTGTTGC+GGG | 0.387723 | 1_4:-2311376 | Msa0143380:intron |
| TGACAAATTTAAGCTCTTAC+CGG | 0.389119 | 1_4:+2308428 | None:intergenic |
| GTTAAGCATCATATTTAATT+GGG | 0.389369 | 1_4:-2308384 | Msa0143380:three_prime_UTR |
| CGAGTTACGGATGGCTTCTA+AGG | 0.391035 | 1_4:-2310922 | Msa0143380:intron |
| ACCTCCAAAATTCAACGAAT+CGG | 0.405812 | 1_4:+2308779 | None:intergenic |
| CTTGTTGTCTTGTTTGGGAG+AGG | 0.408483 | 1_4:+2311091 | None:intergenic |
| TTTCCGACCTTTGGTGTGCC+TGG | 0.419064 | 1_4:+2308913 | None:intergenic |
| TTCAGCTTCGTGTATATTTG+AGG | 0.419331 | 1_4:-2309638 | Msa0143380:intron |
| TCCTCTACAGTCCGAGATGA+TGG | 0.419890 | 1_4:+2311591 | None:intergenic |
| AGCAAACATTGCAAGATCTC+GGG | 0.423802 | 1_4:-2309545 | Msa0143380:CDS |
| TGCGGGCTATATTACTTGCC+AGG | 0.427836 | 1_4:-2311359 | Msa0143380:CDS |
| TAAGGTGTTAGAGGAGATGA+AGG | 0.435766 | 1_4:+2307889 | None:intergenic |
| ACAAGAAATGGAGCGAAAAC+GGG | 0.436669 | 1_4:-2311127 | Msa0143380:CDS |
| GGTTACTGAACAGTCTCAAT+TGG | 0.436817 | 1_4:-2310223 | Msa0143380:CDS |
| GTCAATGGTGTTCTACCTAC+TGG | 0.449074 | 1_4:-2312297 | Msa0143380:CDS |
| ATGGCTGAATCTCCAGAAAC+AGG | 0.450187 | 1_4:-2309217 | Msa0143380:intron |
| GCAGAAGGCACAACCATTTG+TGG | 0.456839 | 1_4:+2310120 | None:intergenic |
| TAATTCATTTGTCTCCTCCT+TGG | 0.460992 | 1_4:+2311668 | None:intergenic |
| AACTGTTGTTTCAGGCGAAA+GGG | 0.463388 | 1_4:-2308668 | Msa0143380:intron |
| CCCAATTGAATTGAATTGAA+AGG | 0.465561 | 1_4:-2312964 | Msa0143380:five_prime_UTR |
| CCTCCAAAATTCAACGAATC+GGG | 0.465713 | 1_4:+2308780 | None:intergenic |
| CAAGCTTCAAACTCAACTGC+TGG | 0.466195 | 1_4:-2309591 | Msa0143380:CDS |
| CCAAAACTCGCTCAAATGGC+AGG | 0.470110 | 1_4:+2308079 | None:intergenic |
| CTGGAGTTCGGACTATCAAA+CGG | 0.471345 | 1_4:-2309572 | Msa0143380:CDS |
| CCTCGGATCTTTAATTCCTC+CGG | 0.474183 | 1_4:-2308447 | Msa0143380:exon |
| GACATATGCACTCGAGCAAA+TGG | 0.476593 | 1_4:-2309616 | Msa0143380:CDS |
| GAATGTGCAACTTCCACAAA+TGG | 0.479963 | 1_4:-2310133 | Msa0143380:CDS |
| TGGAGCAGATGAAGGAGGTA+AGG | 0.480661 | 1_4:+2307871 | None:intergenic |
| GAGCAAACATTGCAAGATCT+CGG | 0.481522 | 1_4:-2309546 | Msa0143380:CDS |
| TAAACCAAAACTCGCTCAAA+TGG | 0.482767 | 1_4:+2308075 | None:intergenic |
| TAAAAGACCTAGAAAACAAA+AGG | 0.485836 | 1_4:-2308470 | Msa0143380:CDS |
| GCGAAAACGGGCACTGTCCA+TGG | 0.488734 | 1_4:-2311115 | Msa0143380:CDS |
| TTTCAGGTTCGAGTAGTCAA+TGG | 0.491064 | 1_4:-2312312 | Msa0143380:intron |
| ACCTAGAAAACAAAAGGCCT+CGG | 0.494235 | 1_4:-2308464 | Msa0143380:CDS |
| CTTTCAATTCAATTCAATTG+GGG | 0.499592 | 1_4:+2312965 | None:intergenic |
| GTCCCCGGAAGATGCAGCCC+TGG | 0.501841 | 1_4:+2311341 | None:intergenic |
| AAACTGTTGTTTCAGGCGAA+AGG | 0.502998 | 1_4:-2308669 | Msa0143380:intron |
| ACAAGAGAAAAGAGATGAAG+AGG | 0.510309 | 1_4:-2311073 | Msa0143380:intron |
| CAAACTCAACTGCTGGAGTT+CGG | 0.511526 | 1_4:-2309584 | Msa0143380:CDS |
| ATCACGGAAAGATGAACCTT+CGG | 0.512389 | 1_4:+2308954 | None:intergenic |
| GAATCTTCAAATGACAAGGT+TGG | 0.514330 | 1_4:+2308025 | None:intergenic |
| ACCTCGCGTGAAATGCCATC+AGG | 0.515608 | 1_4:+2312818 | None:intergenic |
| GTCCCTGTCATGTAGTGTTG+CGG | 0.515697 | 1_4:-2311377 | Msa0143380:intron |
| ACTTTATTTGTATAGGGGCA+TGG | 0.516874 | 1_4:-2308514 | Msa0143380:intron |
| GTCAACTCAGCATGTCATGA+AGG | 0.526130 | 1_4:+2307990 | None:intergenic |
| ATAGTACAACGTCGAAGCAT+CGG | 0.533412 | 1_4:-2313045 | Msa0143380:five_prime_UTR |
| GAGAGGGAAAATTGGAGCGG+AGG | 0.541807 | 1_4:-2312997 | Msa0143380:five_prime_UTR |
| CGAACAGTTGAGAAATTGAG+AGG | 0.542121 | 1_4:-2313014 | Msa0143380:five_prime_UTR |
| TGGAGTTCGGACTATCAAAC+GGG | 0.542516 | 1_4:-2309571 | Msa0143380:CDS |
| TCTTTCCGTGATGGATCCTA+CGG | 0.547451 | 1_4:-2308943 | Msa0143380:CDS |
| TTAAAGGATCGATATTATAG+TGG | 0.547811 | 1_4:-2311567 | Msa0143380:intron |
| GAAGGTTCATCTTTCCGTGA+TGG | 0.548182 | 1_4:-2308952 | Msa0143380:CDS |
| CTTAGAAGCCATCCGTAACT+CGG | 0.558886 | 1_4:+2310923 | None:intergenic |
| GTTGCAGAGAGGGCTGTCCC+TGG | 0.559311 | 1_4:-2310174 | Msa0143380:CDS |
| TGTGGAAGTTGCACATTCGA+AGG | 0.559456 | 1_4:+2310138 | None:intergenic |
| TATCAGCTATAACAACAAAA+CGG | 0.560637 | 1_4:+2311619 | None:intergenic |
| GTTGTTTCAGGCGAAAGGGT+TGG | 0.562497 | 1_4:-2308664 | Msa0143380:intron |
| TTTCTCTGAGATTCTTTGGG+AGG | 0.563303 | 1_4:+2312842 | None:intergenic |
| TTAGTAATTTAAAATACAAG+TGG | 0.569049 | 1_4:+2307937 | None:intergenic |
| TGCCAGGGCTGCATCTTCCG+GGG | 0.572929 | 1_4:-2311343 | Msa0143380:CDS |
| TCCAGGTAAATTTGAAACCG+AGG | 0.579026 | 1_4:-2309296 | Msa0143380:intron |
| CCAGGTAAATTTGAAACCGA+GGG | 0.579215 | 1_4:-2309295 | Msa0143380:intron |
| CTGATAGGTTCCCATCATCT+CGG | 0.582805 | 1_4:-2311602 | Msa0143380:CDS |
| TCTTGTTTGGGAGAGGACCA+TGG | 0.585148 | 1_4:+2311098 | None:intergenic |
| ACCTGATGGCATTTCACGCG+AGG | 0.587818 | 1_4:-2312819 | Msa0143380:intron |
| GCGGGCTATATTACTTGCCA+GGG | 0.590495 | 1_4:-2311358 | Msa0143380:CDS |
| CCTCTACAGTCCGAGATGAT+GGG | 0.592270 | 1_4:+2311592 | None:intergenic |
| AGGGTTGGAGCAGATGAAGG+AGG | 0.596010 | 1_4:+2307866 | None:intergenic |
| AAATTTGTCACAAACGACAC+TGG | 0.598087 | 1_4:-2308415 | Msa0143380:three_prime_UTR |
| TGTGCCTGGTGTTTCACCGT+AGG | 0.598536 | 1_4:+2308927 | None:intergenic |
| GGATCCTACGGTGAAACACC+AGG | 0.600080 | 1_4:-2308931 | Msa0143380:CDS |
| GTGGCAGGTGCAATATAAAG+AGG | 0.604781 | 1_4:-2308977 | Msa0143380:intron |
| GAAACCCTAAATGGACGCGA+AGG | 0.605606 | 1_4:-2312924 | Msa0143380:exon |
| CCCATCATCTCGGACTGTAG+AGG | 0.606561 | 1_4:-2311592 | Msa0143380:CDS |
| TGATGCAGAAGTTGCAGAGA+GGG | 0.607610 | 1_4:-2310184 | Msa0143380:CDS |
| GAAGGAGATACAGTTTCACC+AGG | 0.611694 | 1_4:+2310156 | None:intergenic |
| AAGAATAGCCGAGTTACGGA+TGG | 0.620429 | 1_4:-2310931 | Msa0143380:CDS |
| GAACAGTTGAGAAATTGAGA+GGG | 0.620892 | 1_4:-2313013 | Msa0143380:five_prime_UTR |
| CAAAACTCGCTCAAATGGCA+GGG | 0.623183 | 1_4:+2308080 | None:intergenic |
| GCAAAAGAATAGTCTCCAGT+AGG | 0.625902 | 1_4:+2312282 | None:intergenic |
| AATTATTTGATTTGTGTGAG+AGG | 0.630139 | 1_4:-2311650 | Msa0143380:CDS |
| ATTGAGAGGGAAAATTGGAG+CGG | 0.634070 | 1_4:-2313000 | Msa0143380:five_prime_UTR |
| CAAATTTAAGCTCTTACCGG+AGG | 0.645111 | 1_4:+2308431 | None:intergenic |
| GAATCTCAGAGAAAACCTGA+TGG | 0.650054 | 1_4:-2312833 | Msa0143380:CDS |
| GCAAACATTGCAAGATCTCG+GGG | 0.655130 | 1_4:-2309544 | Msa0143380:intron |
| AGGATGTGTTGCAATGTCCC+CGG | 0.656289 | 1_4:+2311326 | None:intergenic |
| AGAAGAATCTTCAAATGACA+AGG | 0.659923 | 1_4:+2308021 | None:intergenic |
| TGAAACACCAGGCACACCAA+AGG | 0.660161 | 1_4:-2308920 | Msa0143380:intron |
| CCGGAGGAATTAAAGATCCG+AGG | 0.665879 | 1_4:+2308447 | None:intergenic |
| GTGCAATATAAAGAGGCCGA+AGG | 0.666909 | 1_4:-2308970 | Msa0143380:CDS |
| ATCTACCTAGATGTGGACCA+AGG | 0.676327 | 1_4:-2311685 | Msa0143380:intron |
| TAAGAAGAGAAATACTAACA+TGG | 0.691447 | 1_4:-2309236 | Msa0143380:CDS |
| CTGATGCAGAAGTTGCAGAG+AGG | 0.692246 | 1_4:-2310185 | Msa0143380:CDS |
| TTTCACCGTAGGATCCATCA+CGG | 0.706383 | 1_4:+2308938 | None:intergenic |
| AAGGAGATACAGTTTCACCA+GGG | 0.739390 | 1_4:+2310157 | None:intergenic |
| TACCTAGATGTGGACCAAGG+AGG | 0.740553 | 1_4:-2311682 | Msa0143380:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGAATTGTATTATTTTT+AGG | - | chr1_4:2308216-2308235 | Msa0143380:intron | 10.0% |
| !!! | TCAAATAATTTTTTTTAATG+AGG | - | chr1_4:2311214-2311233 | Msa0143380:intron | 10.0% |
| !!! | CAAATAATTTTTTTTAATGA+GGG | - | chr1_4:2311215-2311234 | Msa0143380:intron | 10.0% |
| !!! | AAATAATTTTTTTTAATGAG+GGG | - | chr1_4:2311216-2311235 | Msa0143380:intron | 10.0% |
| !! | TAATTAAATCAAAGAAATTT+GGG | + | chr1_4:2311925-2311944 | None:intergenic | 10.0% |
| !!! | ATTAATTTTACATTTACTTT+TGG | - | chr1_4:2312361-2312380 | Msa0143380:intron | 10.0% |
| !! | ACATAAAATAAATTTCAGTT+CGG | + | chr1_4:2308931-2308950 | None:intergenic | 15.0% |
| !! | TATATGATATATTGTACAAT+GGG | + | chr1_4:2309091-2309110 | None:intergenic | 15.0% |
| !! | ATATATGATATATTGTACAA+TGG | + | chr1_4:2309092-2309111 | None:intergenic | 15.0% |
| !!! | GTATTATTTTTTTTCTTTGA+AGG | + | chr1_4:2309896-2309915 | None:intergenic | 15.0% |
| !! | AATAAGATATTAAATGACTA+AGG | + | chr1_4:2310444-2310463 | None:intergenic | 15.0% |
| !!! | ATTGATTTTATACATTTTTC+AGG | - | chr1_4:2310693-2310712 | Msa0143380:intron | 15.0% |
| !! | AATTAAATCAAAGAAATTTG+GGG | + | chr1_4:2311924-2311943 | None:intergenic | 15.0% |
| !! | GTAATTAAATCAAAGAAATT+TGG | + | chr1_4:2311926-2311945 | None:intergenic | 15.0% |
| !! | TTCTAAATTTCTATAAAGTA+AGG | - | chr1_4:2312210-2312229 | Msa0143380:intron | 15.0% |
| !! | TCTAAATTTCTATAAAGTAA+GGG | - | chr1_4:2312211-2312230 | Msa0143380:intron | 15.0% |
| !! | TATGTTTAATGATAAATAGA+TGG | + | chr1_4:2312242-2312261 | None:intergenic | 15.0% |
| !! | TAATTAGACAAAAAAAATTG+TGG | + | chr1_4:2312326-2312345 | None:intergenic | 15.0% |
| !! | ATGTAAAATTAATCAATTGA+CGG | + | chr1_4:2312354-2312373 | None:intergenic | 15.0% |
| !! | GTAATAGTACATTATTAAAA+TGG | + | chr1_4:2312388-2312407 | None:intergenic | 15.0% |
| !!! | TTTTAATAATGTACTATTAC+TGG | - | chr1_4:2312388-2312407 | Msa0143380:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr1_4:2312621-2312640 | None:intergenic | 15.0% |
| !! | AGAAAAATTTATTATTGCAT+TGG | + | chr1_4:2312661-2312680 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr1_4:2312710-2312729 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr1_4:2312734-2312753 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr1_4:2312733-2312752 | Msa0143380:intron | 15.0% |
| !!! | TTAGTAATTTAAAATACAAG+TGG | + | chr1_4:2313003-2313022 | None:intergenic | 15.0% |
| !!! | TTTTTATTATCAAGAGAAGA+TGG | + | chr1_4:2308068-2308087 | None:intergenic | 20.0% |
| !! | AAAGAATGAATAAAGTGAAT+CGG | + | chr1_4:2308175-2308194 | None:intergenic | 20.0% |
| !! | TATTAAGATGATTATCCAAA+CGG | - | chr1_4:2308440-2308459 | Msa0143380:exon | 20.0% |
| !!! | TACAGTTTTTTGGAAATTTA+TGG | - | chr1_4:2308862-2308881 | Msa0143380:intron | 20.0% |
| !! | GCAATCAATTTATATATCAA+TGG | - | chr1_4:2309027-2309046 | Msa0143380:intron | 20.0% |
| !! | ATATGATATATTGTACAATG+GGG | + | chr1_4:2309090-2309109 | None:intergenic | 20.0% |
| !! | ATTTCTTGTGAAACATTATA+TGG | + | chr1_4:2309799-2309818 | None:intergenic | 20.0% |
| !! | ATATAATGTTTCACAAGAAA+TGG | - | chr1_4:2309798-2309817 | Msa0143380:intron | 20.0% |
| !!! | CTTATATTGTTTTATTTTGC+AGG | - | chr1_4:2309967-2309986 | Msa0143380:intron | 20.0% |
| !! | TTAAAAAGTGACACTTAAAA+AGG | + | chr1_4:2310347-2310366 | None:intergenic | 20.0% |
| !! | TTAAAAAGTGACAGTTAAAT+AGG | - | chr1_4:2310586-2310605 | Msa0143380:intron | 20.0% |
| !! | TAAAAAGTGACAGTTAAATA+GGG | - | chr1_4:2310587-2310606 | Msa0143380:intron | 20.0% |
| !! | ATTTGATATTTCGCTATTTA+GGG | + | chr1_4:2310941-2310960 | None:intergenic | 20.0% |
| !! | AATTTGATATTTCGCTATTT+AGG | + | chr1_4:2310942-2310961 | None:intergenic | 20.0% |
| !! | ATTAAGAAAGATGGTTAATT+TGG | + | chr1_4:2311504-2311523 | None:intergenic | 20.0% |
| !! | ATTAAATCAAAGAAATTTGG+GGG | + | chr1_4:2311923-2311942 | None:intergenic | 20.0% |
| !! | TTTATAGAAATTTAGAAAGC+AGG | + | chr1_4:2312207-2312226 | None:intergenic | 20.0% |
| !! | TGTAAAATTAATCAATTGAC+GGG | + | chr1_4:2312353-2312372 | None:intergenic | 20.0% |
| !! | TGTTAAGCATCATATTTAAT+TGG | - | chr1_4:2312552-2312571 | Msa0143380:intron | 20.0% |
| !! | GTTAAGCATCATATTTAATT+GGG | - | chr1_4:2312553-2312572 | Msa0143380:intron | 20.0% |
| !! | TCATATTTAATTGGGTTAAA+TGG | - | chr1_4:2312561-2312580 | Msa0143380:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr1_4:2312724-2312743 | Msa0143380:intron | 20.0% |
| ! | CTTTCAATTCAATTCAATTG+GGG | + | chr1_4:2307975-2307994 | None:intergenic | 25.0% |
| ! | CCTTTCAATTCAATTCAATT+GGG | + | chr1_4:2307976-2307995 | None:intergenic | 25.0% |
| ! | ACCTTTCAATTCAATTCAAT+TGG | + | chr1_4:2307977-2307996 | None:intergenic | 25.0% |
| !! | GAATTGAATTGAAAGGTTTT+TGG | - | chr1_4:2307980-2307999 | Msa0143380:three_prime_UTR | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+AGG | + | chr1_4:2308400-2308419 | None:intergenic | 25.0% |
| ! | ATTAAGATGATTATCCAAAC+GGG | - | chr1_4:2308441-2308460 | Msa0143380:exon | 25.0% |
| !!! | ATTATGTTTTTCAGGTTACT+TGG | - | chr1_4:2308467-2308486 | Msa0143380:CDS | 25.0% |
| ! | CCAAAAATATAGCAATGAAT+AGG | + | chr1_4:2308730-2308749 | None:intergenic | 25.0% |
| !! | CCTATTCATTGCTATATTTT+TGG | - | chr1_4:2308727-2308746 | Msa0143380:intron | 25.0% |
| !!! | TGTCTAATTGTACAGTTTTT+TGG | - | chr1_4:2308852-2308871 | Msa0143380:intron | 25.0% |
| ! | AAGTTTAGACATGAAAAATG+AGG | - | chr1_4:2308996-2309015 | Msa0143380:intron | 25.0% |
| ! | AGTTTAGACATGAAAAATGA+GGG | - | chr1_4:2308997-2309016 | Msa0143380:intron | 25.0% |
| ! | AATTTATATATCAATGGACC+TGG | - | chr1_4:2309033-2309052 | Msa0143380:intron | 25.0% |
| ! | TTAACAAATGCAGTTAAAAC+AGG | + | chr1_4:2309121-2309140 | None:intergenic | 25.0% |
| ! | ATATTAATGCATTGAACACT+TGG | + | chr1_4:2309217-2309236 | None:intergenic | 25.0% |
| !!! | AATTATTTGATTTGTGTGAG+AGG | - | chr1_4:2309287-2309306 | Msa0143380:CDS | 25.0% |
| ! | TATCAGCTATAACAACAAAA+CGG | + | chr1_4:2309321-2309340 | None:intergenic | 25.0% |
| ! | TTAAAGGATCGATATTATAG+TGG | - | chr1_4:2309370-2309389 | Msa0143380:intron | 25.0% |
| ! | TACCAATACACCATTAATTT+AGG | - | chr1_4:2310058-2310077 | Msa0143380:intron | 25.0% |
| ! | GATAACAACTCCTAAATTAA+TGG | + | chr1_4:2310071-2310090 | None:intergenic | 25.0% |
| ! | AGAAATCAGAATTAGATCAT+AGG | + | chr1_4:2310113-2310132 | None:intergenic | 25.0% |
| !!! | TAATATTCAAAGTGATGGAT+AGG | + | chr1_4:2310158-2310177 | None:intergenic | 25.0% |
| ! | TATCCATCACTTTGAATATT+AGG | - | chr1_4:2310157-2310176 | Msa0143380:CDS | 25.0% |
| ! | ATCCATCACTTTGAATATTA+GGG | - | chr1_4:2310158-2310177 | Msa0143380:CDS | 25.0% |
| ! | TCTCCACAATAAATAACTAA+GGG | - | chr1_4:2310477-2310496 | Msa0143380:intron | 25.0% |
| ! | TTACCCTTAGTTATTTATTG+TGG | + | chr1_4:2310483-2310502 | None:intergenic | 25.0% |
| ! | TAAATAACTAAGGGTAATGT+TGG | - | chr1_4:2310486-2310505 | Msa0143380:intron | 25.0% |
| !!! | TATTTAACTGTCACTTTCAA+AGG | + | chr1_4:2310538-2310557 | None:intergenic | 25.0% |
| ! | TTTGAAAGTGACAGTTAAAT+AGG | - | chr1_4:2310537-2310556 | Msa0143380:intron | 25.0% |
| ! | ATGTATAAAATCAATATCCC+AGG | + | chr1_4:2310688-2310707 | None:intergenic | 25.0% |
| ! | TACAATTTCAGAACACAAAA+TGG | + | chr1_4:2310898-2310917 | None:intergenic | 25.0% |
| !!! | AATTTTGAAGATCAGAATTC+TGG | + | chr1_4:2311169-2311188 | None:intergenic | 25.0% |
| ! | GATTCTACTATCTAATTCAT+GGG | + | chr1_4:2311528-2311547 | None:intergenic | 25.0% |
| ! | AGATTCTACTATCTAATTCA+TGG | + | chr1_4:2311529-2311548 | None:intergenic | 25.0% |
| ! | GATAGTAGAATCTTATATTG+AGG | - | chr1_4:2311536-2311555 | Msa0143380:intron | 25.0% |
| ! | CTCGTTACAAAAATTTCATT+TGG | + | chr1_4:2311578-2311597 | None:intergenic | 25.0% |
| ! | TAAGAAGAGAAATACTAACA+TGG | - | chr1_4:2311701-2311720 | Msa0143380:intron | 25.0% |
| !!! | TTCACTTGTTAGAATTTTCA+TGG | - | chr1_4:2311822-2311841 | Msa0143380:intron | 25.0% |
| !!! | TCACTTGTTAGAATTTTCAT+GGG | - | chr1_4:2311823-2311842 | Msa0143380:intron | 25.0% |
| ! | TAAACAATCATACATTAGAC+AGG | + | chr1_4:2311860-2311879 | None:intergenic | 25.0% |
| ! | TTAAATCAAAGAAATTTGGG+GGG | + | chr1_4:2311922-2311941 | None:intergenic | 25.0% |
| ! | AATAATGTACTATTACTGGT+TGG | - | chr1_4:2312392-2312411 | Msa0143380:intron | 25.0% |
| ! | TAAAAGACCTAGAAAACAAA+AGG | - | chr1_4:2312467-2312486 | Msa0143380:intron | 25.0% |
| ! | AATGATTAAGAGAAAGAGAA+TGG | + | chr1_4:2312767-2312786 | None:intergenic | 25.0% |
| CCCAATTGAATTGAATTGAA+AGG | - | chr1_4:2307973-2307992 | Msa0143380:three_prime_UTR | 30.0% | |
| !!! | TTTTAGGTTTATGCACTTAC+TGG | - | chr1_4:2308232-2308251 | Msa0143380:intron | 30.0% |
| !! | AATTGAGAAGCATCAATTGA+TGG | + | chr1_4:2308277-2308296 | None:intergenic | 30.0% |
| AATAAGCTGAAAAGGACTTA+TGG | + | chr1_4:2308392-2308411 | None:intergenic | 30.0% | |
| TTAAGATGATTATCCAAACG+GGG | - | chr1_4:2308442-2308461 | Msa0143380:exon | 30.0% | |
| AAAAACATAATAACCCCGTT+TGG | + | chr1_4:2308458-2308477 | None:intergenic | 30.0% | |
| ATGATCTTCATCTTTACCAT+TGG | - | chr1_4:2308524-2308543 | Msa0143380:intron | 30.0% | |
| TGATCTTCATCTTTACCATT+GGG | - | chr1_4:2308525-2308544 | Msa0143380:intron | 30.0% | |
| ! | TATGTATCAAGTTGTGATTG+TGG | - | chr1_4:2308951-2308970 | Msa0143380:CDS | 30.0% |
| ! | ATGTATCAAGTTGTGATTGT+GGG | - | chr1_4:2308952-2308971 | Msa0143380:CDS | 30.0% |
| CTTACAATAGAAGTCAATGA+AGG | + | chr1_4:2308979-2308998 | None:intergenic | 30.0% | |
| GTTTAGACATGAAAAATGAG+GGG | - | chr1_4:2308998-2309017 | Msa0143380:intron | 30.0% | |
| TAGGTAGATAAAGCAGAATA+AGG | + | chr1_4:2309241-2309260 | None:intergenic | 30.0% | |
| !!! | GTTTTGTTGTTATAGCTGAT+AGG | - | chr1_4:2309320-2309339 | Msa0143380:intron | 30.0% |
| GAGTTAAATGACATGAATTG+TGG | + | chr1_4:2309431-2309450 | None:intergenic | 30.0% | |
| ACCTTTCAATTCTGATGATA+TGG | - | chr1_4:2309486-2309505 | Msa0143380:intron | 30.0% | |
| TCCATATCATCAGAATTGAA+AGG | + | chr1_4:2309490-2309509 | None:intergenic | 30.0% | |
| ! | TTTGACTTCACCTTAATGAT+AGG | + | chr1_4:2309634-2309653 | None:intergenic | 30.0% |
| !! | TTTCTCTTGTTGTCTTGTTT+GGG | + | chr1_4:2309854-2309873 | None:intergenic | 30.0% |
| !! | TTTTCTCTTGTTGTCTTGTT+TGG | + | chr1_4:2309855-2309874 | None:intergenic | 30.0% |
| CTCCTAAATTAATGGTGTAT+TGG | + | chr1_4:2310063-2310082 | None:intergenic | 30.0% | |
| TTCCCTAATATTCAAAGTGA+TGG | + | chr1_4:2310163-2310182 | None:intergenic | 30.0% | |
| AAGTGACACTTAAAAAGGAA+CGG | + | chr1_4:2310342-2310361 | None:intergenic | 30.0% | |
| GTAACAATTATTGAGTGTCT+TGG | + | chr1_4:2310383-2310402 | None:intergenic | 30.0% | |
| CTCTCCACAATAAATAACTA+AGG | - | chr1_4:2310476-2310495 | Msa0143380:intron | 30.0% | |
| !!! | TCACTTTTTAAGTGTCACTT+TGG | + | chr1_4:2310577-2310596 | None:intergenic | 30.0% |
| ATAGGGAGTAATTACCAATT+TGG | - | chr1_4:2310604-2310623 | Msa0143380:intron | 30.0% | |
| TAGGGAGTAATTACCAATTT+GGG | - | chr1_4:2310605-2310624 | Msa0143380:intron | 30.0% | |
| CATAAAAAGTTAAGGTAGTC+GGG | + | chr1_4:2311424-2311443 | None:intergenic | 30.0% | |
| GCATAAAAAGTTAAGGTAGT+CGG | + | chr1_4:2311425-2311444 | None:intergenic | 30.0% | |
| TTCATGGGTATTAAGAAAGA+TGG | + | chr1_4:2311513-2311532 | None:intergenic | 30.0% | |
| TTGAGTTTGACCATATGTTT+GGG | - | chr1_4:2311598-2311617 | Msa0143380:CDS | 30.0% | |
| TATACCAATATACCTGTTTC+TGG | + | chr1_4:2311735-2311754 | None:intergenic | 30.0% | |
| CATTCATGTTTATAACCAGA+TGG | - | chr1_4:2311795-2311814 | Msa0143380:intron | 30.0% | |
| !! | ATTACTTGTTGTGAAATACG+TGG | - | chr1_4:2311941-2311960 | Msa0143380:intron | 30.0% |
| AAATATGAATTTCCGACCTT+TGG | + | chr1_4:2312036-2312055 | None:intergenic | 30.0% | |
| ! | AGTTTCCCTTCTATTGTTTT+AGG | - | chr1_4:2312071-2312090 | Msa0143380:intron | 30.0% |
| !! | ATGCATAAAACTGTTGTTTC+AGG | - | chr1_4:2312261-2312280 | Msa0143380:intron | 30.0% |
| ! | TCGGGAACTTTATTTGTATA+GGG | - | chr1_4:2312417-2312436 | Msa0143380:intron | 30.0% |
| TGACAAATTTAAGCTCTTAC+CGG | + | chr1_4:2312512-2312531 | None:intergenic | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr1_4:2312816-2312835 | Msa0143380:intron | 30.0% |
| AGAAGAATCTTCAAATGACA+AGG | + | chr1_4:2312919-2312938 | None:intergenic | 30.0% | |
| GAACAGTTGAGAAATTGAGA+GGG | - | chr1_4:2307924-2307943 | Msa0143380:three_prime_UTR | 35.0% | |
| GAGAAATTGAGAGGGAAAAT+TGG | - | chr1_4:2307932-2307951 | Msa0143380:three_prime_UTR | 35.0% | |
| TGTTCCTATGAAACCCTAAA+TGG | - | chr1_4:2308004-2308023 | Msa0143380:three_prime_UTR | 35.0% | |
| !!! | GGTTTTCTCTGAGATTCTTT+GGG | + | chr1_4:2308101-2308120 | None:intergenic | 35.0% |
| !!! | AGGTTTTCTCTGAGATTCTT+TGG | + | chr1_4:2308102-2308121 | None:intergenic | 35.0% |
| ! | ACGGGGTTATTATGTTTTTC+AGG | - | chr1_4:2308459-2308478 | Msa0143380:CDS | 35.0% |
| !!! | TTTTTCAGGTTACTTGGCAA+TGG | - | chr1_4:2308473-2308492 | Msa0143380:CDS | 35.0% |
| ATCATCTTTACGAGCAGAAT+TGG | + | chr1_4:2308509-2308528 | None:intergenic | 35.0% | |
| !!! | TTATGTGTCGCTTCTTTTTC+AGG | - | chr1_4:2308609-2308628 | Msa0143380:intron | 35.0% |
| ! | TTCTTTTGCCAAGTACAACA+AGG | - | chr1_4:2308669-2308688 | Msa0143380:intron | 35.0% |
| ! | TTTAGCTACCTTGTTGTACT+TGG | + | chr1_4:2308680-2308699 | None:intergenic | 35.0% |
| ! | AAAGTATTTGACAGATCCTG+TGG | - | chr1_4:2308822-2308841 | Msa0143380:intron | 35.0% |
| AAGTATTTGACAGATCCTGT+GGG | - | chr1_4:2308823-2308842 | Msa0143380:intron | 35.0% | |
| AATTAGACATGATTACCCAC+AGG | + | chr1_4:2308841-2308860 | None:intergenic | 35.0% | |
| ATGCATTGAACACTTGGTAA+AGG | + | chr1_4:2309211-2309230 | None:intergenic | 35.0% | |
| TAATTCATTTGTCTCCTCCT+TGG | + | chr1_4:2309272-2309291 | None:intergenic | 35.0% | |
| TGCAACACATCCTATCATTA+AGG | - | chr1_4:2309621-2309640 | Msa0143380:CDS | 35.0% | |
| TTACTATCAACACATGGCAA+TGG | + | chr1_4:2309750-2309769 | None:intergenic | 35.0% | |
| AACAGGTTACTATCAACACA+TGG | + | chr1_4:2309756-2309775 | None:intergenic | 35.0% | |
| CTACATTGAAAAGAGAGAAC+AGG | + | chr1_4:2309773-2309792 | None:intergenic | 35.0% | |
| ! | CTGTTCTCTCTTTTCAATGT+AGG | - | chr1_4:2309771-2309790 | Msa0143380:intron | 35.0% |
| ACAAGAGAAAAGAGATGAAG+AGG | - | chr1_4:2309864-2309883 | Msa0143380:intron | 35.0% | |
| ACTTCATACATTTCTGCCAT+CGG | - | chr1_4:2309914-2309933 | Msa0143380:intron | 35.0% | |
| TTATTATGAGGGTAAACCGA+TGG | + | chr1_4:2309933-2309952 | None:intergenic | 35.0% | |
| CCAGACGTCATTTATTATGA+GGG | + | chr1_4:2309944-2309963 | None:intergenic | 35.0% | |
| ACCAGACGTCATTTATTATG+AGG | + | chr1_4:2309945-2309964 | None:intergenic | 35.0% | |
| CAAAAAGAATAGCCGAGTTA+CGG | - | chr1_4:2310002-2310021 | Msa0143380:intron | 35.0% | |
| GGAGTTGTTATCATGATTCA+AGG | - | chr1_4:2310079-2310098 | Msa0143380:intron | 35.0% | |
| AGGGAGTAATTACCAATTTG+GGG | - | chr1_4:2310606-2310625 | Msa0143380:intron | 35.0% | |
| ! | CAAATTTTGTTGCCCCAAAT+TGG | + | chr1_4:2310621-2310640 | None:intergenic | 35.0% |
| ! | ATTTGGGGCAACAAAATTTG+TGG | - | chr1_4:2310621-2310640 | Msa0143380:intron | 35.0% |
| !! | GTTCTGAAATTGTAAGTGTC+TGG | - | chr1_4:2310904-2310923 | Msa0143380:intron | 35.0% |
| ATTGTAAGTGTCTGGCAATT+TGG | - | chr1_4:2310912-2310931 | Msa0143380:intron | 35.0% | |
| TTGTAAGTGTCTGGCAATTT+GGG | - | chr1_4:2310913-2310932 | Msa0143380:intron | 35.0% | |
| GACTGTCGTTAGACAATTTA+GGG | + | chr1_4:2310969-2310988 | None:intergenic | 35.0% | |
| TGACTGTCGTTAGACAATTT+AGG | + | chr1_4:2310970-2310989 | None:intergenic | 35.0% | |
| ATCATGTTAAGCAGAACACT+AGG | - | chr1_4:2311033-2311052 | Msa0143380:intron | 35.0% | |
| ! | AAAACTTCGTTTTGTAGCAC+TGG | - | chr1_4:2311137-2311156 | Msa0143380:CDS | 35.0% |
| TTCAGCTTCGTGTATATTTG+AGG | - | chr1_4:2311299-2311318 | Msa0143380:intron | 35.0% | |
| GCAAGCTGCATAAAAAGTTA+AGG | + | chr1_4:2311432-2311451 | None:intergenic | 35.0% | |
| GTTGAGTTTGACCATATGTT+TGG | - | chr1_4:2311597-2311616 | Msa0143380:CDS | 35.0% | |
| ATCTCCAGAAACAGGTATAT+TGG | - | chr1_4:2311728-2311747 | Msa0143380:intron | 35.0% | |
| TAACAAGTGAAATCACCATC+TGG | + | chr1_4:2311813-2311832 | None:intergenic | 35.0% | |
| GAATCAGCAACATTCTATAC+TGG | - | chr1_4:2311882-2311901 | Msa0143380:intron | 35.0% | |
| ACGAGCCTAAAACAATAGAA+GGG | + | chr1_4:2312079-2312098 | None:intergenic | 35.0% | |
| !! | ATTCCCGATTCGTTGAATTT+TGG | - | chr1_4:2312154-2312173 | Msa0143380:intron | 35.0% |
| ACCTCCAAAATTCAACGAAT+CGG | + | chr1_4:2312161-2312180 | None:intergenic | 35.0% | |
| ! | CTCGGGAACTTTATTTGTAT+AGG | - | chr1_4:2312416-2312435 | Msa0143380:intron | 35.0% |
| ! | CGGGAACTTTATTTGTATAG+GGG | - | chr1_4:2312418-2312437 | Msa0143380:intron | 35.0% |
| ! | ACTTTATTTGTATAGGGGCA+TGG | - | chr1_4:2312423-2312442 | Msa0143380:intron | 35.0% |
| AAATTTGTCACAAACGACAC+TGG | - | chr1_4:2312522-2312541 | Msa0143380:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr1_4:2312595-2312614 | None:intergenic | 35.0% |
| TAAACCAAAACTCGCTCAAA+TGG | + | chr1_4:2312865-2312884 | None:intergenic | 35.0% | |
| GAATCTTCAAATGACAAGGT+TGG | + | chr1_4:2312915-2312934 | None:intergenic | 35.0% | |
| ATAGTACAACGTCGAAGCAT+CGG | - | chr1_4:2307892-2307911 | Msa0143380:three_prime_UTR | 40.0% | |
| CGAACAGTTGAGAAATTGAG+AGG | - | chr1_4:2307923-2307942 | Msa0143380:three_prime_UTR | 40.0% | |
| ATTGAGAGGGAAAATTGGAG+CGG | - | chr1_4:2307937-2307956 | Msa0143380:three_prime_UTR | 40.0% | |
| ATATCCTTCGCGTCCATTTA+GGG | + | chr1_4:2308020-2308039 | None:intergenic | 40.0% | |
| AATATCCTTCGCGTCCATTT+AGG | + | chr1_4:2308021-2308040 | None:intergenic | 40.0% | |
| !! | TTTCTCTGAGATTCTTTGGG+AGG | + | chr1_4:2308098-2308117 | None:intergenic | 40.0% |
| GAATCTCAGAGAAAACCTGA+TGG | - | chr1_4:2308104-2308123 | Msa0143380:intron | 40.0% | |
| TAGGTTTATGCACTTACTGG+TGG | - | chr1_4:2308235-2308254 | Msa0143380:intron | 40.0% | |
| ! | TCAATTGATGGCATAAGAGG+TGG | + | chr1_4:2308265-2308284 | None:intergenic | 40.0% |
| ! | GCATCAATTGATGGCATAAG+AGG | + | chr1_4:2308268-2308287 | None:intergenic | 40.0% |
| ! | GTTCAAACCTTTTCGTGAGT+AGG | + | chr1_4:2308313-2308332 | None:intergenic | 40.0% |
| TTACGAGCAGAATTGGTGAA+AGG | + | chr1_4:2308502-2308521 | None:intergenic | 40.0% | |
| !! | TTTCAGGTTCGAGTAGTCAA+TGG | - | chr1_4:2308625-2308644 | Msa0143380:intron | 40.0% |
| GCAAAAGAATAGTCTCCAGT+AGG | + | chr1_4:2308658-2308677 | None:intergenic | 40.0% | |
| CATCATCAAATACACAGACG+AGG | - | chr1_4:2308792-2308811 | Msa0143380:CDS | 40.0% | |
| AATGGACCTGGTTATTTGCA+AGG | - | chr1_4:2309045-2309064 | Msa0143380:intron | 40.0% | |
| CTGCTTTATCTACCTAGATG+TGG | - | chr1_4:2309245-2309264 | Msa0143380:CDS | 40.0% | |
| !! | CAGGTGAGAGTCTGTTTTAA+CGG | + | chr1_4:2309720-2309739 | None:intergenic | 40.0% |
| CACAAGAAATGGAGCGAAAA+CGG | - | chr1_4:2309809-2309828 | Msa0143380:intron | 40.0% | |
| ACAAGAAATGGAGCGAAAAC+GGG | - | chr1_4:2309810-2309829 | Msa0143380:intron | 40.0% | |
| CCCTCATAATAAATGACGTC+TGG | - | chr1_4:2309941-2309960 | Msa0143380:intron | 40.0% | |
| TGACACTTAAAAAGGAACGG+AGG | + | chr1_4:2310339-2310358 | None:intergenic | 40.0% | |
| GGTTACTGAACAGTCTCAAT+TGG | - | chr1_4:2310714-2310733 | Msa0143380:intron | 40.0% | |
| AAGGAGATACAGTTTCACCA+GGG | + | chr1_4:2310783-2310802 | None:intergenic | 40.0% | |
| GAATGTGCAACTTCCACAAA+TGG | - | chr1_4:2310804-2310823 | Msa0143380:intron | 40.0% | |
| !! | GTAGAAGCATTATCTGCAGA+AGG | + | chr1_4:2310835-2310854 | None:intergenic | 40.0% |
| GAGCAAACATTGCAAGATCT+CGG | - | chr1_4:2311391-2311410 | Msa0143380:intron | 40.0% | |
| AGCAAACATTGCAAGATCTC+GGG | - | chr1_4:2311392-2311411 | Msa0143380:intron | 40.0% | |
| GCATCATGAACCCAAACATA+TGG | + | chr1_4:2311611-2311630 | None:intergenic | 40.0% | |
| ATGATGCATTCTGTGATTCC+AGG | - | chr1_4:2311624-2311643 | Msa0143380:CDS | 40.0% | |
| ! | TCCAGGTAAATTTGAAACCG+AGG | - | chr1_4:2311641-2311660 | Msa0143380:CDS | 40.0% |
| ! | CCAGGTAAATTTGAAACCGA+GGG | - | chr1_4:2311642-2311661 | Msa0143380:CDS | 40.0% |
| ! | TCTGCACAAACAGCTTTTGT+TGG | + | chr1_4:2311670-2311689 | None:intergenic | 40.0% |
| ATCACGGAAAGATGAACCTT+CGG | + | chr1_4:2311986-2312005 | None:intergenic | 40.0% | |
| CACGAGCCTAAAACAATAGA+AGG | + | chr1_4:2312080-2312099 | None:intergenic | 40.0% | |
| !!! | CTTCTATTGTTTTAGGCTCG+TGG | - | chr1_4:2312078-2312097 | Msa0143380:intron | 40.0% |
| !!! | ATTGTTTTAGGCTCGTGGTT+TGG | - | chr1_4:2312083-2312102 | Msa0143380:intron | 40.0% |
| CTACTGACACATTTGTTTCG+TGG | - | chr1_4:2312109-2312128 | Msa0143380:intron | 40.0% | |
| TGACACATTTGTTTCGTGGT+GGG | - | chr1_4:2312113-2312132 | Msa0143380:intron | 40.0% | |
| CCTCCAAAATTCAACGAATC+GGG | + | chr1_4:2312160-2312179 | None:intergenic | 40.0% | |
| !! | AAACTGTTGTTTCAGGCGAA+AGG | - | chr1_4:2312268-2312287 | Msa0143380:intron | 40.0% |
| !! | AACTGTTGTTTCAGGCGAAA+GGG | - | chr1_4:2312269-2312288 | Msa0143380:CDS | 40.0% |
| CAAAAAGGACCAAAAACGCA+AGG | - | chr1_4:2312296-2312315 | Msa0143380:CDS | 40.0% | |
| !! | GTACTATTACTGGTTGGTCT+CGG | - | chr1_4:2312398-2312417 | Msa0143380:intron | 40.0% |
| !! | TACTATTACTGGTTGGTCTC+GGG | - | chr1_4:2312399-2312418 | Msa0143380:intron | 40.0% |
| ACCTAGAAAACAAAAGGCCT+CGG | - | chr1_4:2312473-2312492 | Msa0143380:intron | 40.0% | |
| CAAATTTAAGCTCTTACCGG+AGG | + | chr1_4:2312509-2312528 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1_4:2312820-2312839 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1_4:2312820-2312839 | Msa0143380:CDS | 40.0% |
| ! | TAAGGTGTTAGAGGAGATGA+AGG | + | chr1_4:2313051-2313070 | None:intergenic | 40.0% |
| ! | GCGTCCATTTAGGGTTTCAT+AGG | + | chr1_4:2308011-2308030 | None:intergenic | 45.0% |
| ATGGACGCGAAGGATATTCT+TGG | - | chr1_4:2308023-2308042 | Msa0143380:three_prime_UTR | 45.0% | |
| AAAGCCTCCTACTCACGAAA+AGG | - | chr1_4:2308303-2308322 | Msa0143380:intron | 45.0% | |
| ! | CAAACCTTTTCGTGAGTAGG+AGG | + | chr1_4:2308310-2308329 | None:intergenic | 45.0% |
| TGACGTAAGCACTTGTGAAG+AGG | - | chr1_4:2308355-2308374 | Msa0143380:intron | 45.0% | |
| GACGTAAGCACTTGTGAAGA+GGG | - | chr1_4:2308356-2308375 | Msa0143380:intron | 45.0% | |
| GCATATTGTGACTGACCCAA+TGG | + | chr1_4:2308543-2308562 | None:intergenic | 45.0% | |
| GTCAATGGTGTTCTACCTAC+TGG | - | chr1_4:2308640-2308659 | Msa0143380:intron | 45.0% | |
| AGAGGTCCTTGCAAATAACC+AGG | + | chr1_4:2309054-2309073 | None:intergenic | 45.0% | |
| ATCTACCTAGATGTGGACCA+AGG | - | chr1_4:2309252-2309271 | Msa0143380:CDS | 45.0% | |
| CTGATAGGTTCCCATCATCT+CGG | - | chr1_4:2309335-2309354 | Msa0143380:intron | 45.0% | |
| TCGGACTGTAGAGGAGTTAA+AGG | - | chr1_4:2309354-2309373 | Msa0143380:intron | 45.0% | |
| CAACACATGGCAATGGCTTA+AGG | + | chr1_4:2309743-2309762 | None:intergenic | 45.0% | |
| !! | CTTGTTGTCTTGTTTGGGAG+AGG | + | chr1_4:2309849-2309868 | None:intergenic | 45.0% |
| AAGAATAGCCGAGTTACGGA+TGG | - | chr1_4:2310006-2310025 | Msa0143380:intron | 45.0% | |
| CTTAGAAGCCATCCGTAACT+CGG | + | chr1_4:2310017-2310036 | None:intergenic | 45.0% | |
| GAAAATGCGCACAGCATACT+AGG | + | chr1_4:2310191-2310210 | None:intergenic | 45.0% | |
| ! | TGTGCGCATTTTCGTTTGCA+TGG | - | chr1_4:2310198-2310217 | Msa0143380:CDS | 45.0% |
| ! | GTGCGCATTTTCGTTTGCAT+GGG | - | chr1_4:2310199-2310218 | Msa0143380:CDS | 45.0% |
| ATCTGTACTTGCACATGCCT+GGG | - | chr1_4:2310668-2310687 | Msa0143380:intron | 45.0% | |
| TGATGCAGAAGTTGCAGAGA+GGG | - | chr1_4:2310753-2310772 | Msa0143380:intron | 45.0% | |
| GAAGGAGATACAGTTTCACC+AGG | + | chr1_4:2310784-2310803 | None:intergenic | 45.0% | |
| TGTGGAAGTTGCACATTCGA+AGG | + | chr1_4:2310802-2310821 | None:intergenic | 45.0% | |
| ! | TACTCTAGCTTCTCTTCGCA+TGG | - | chr1_4:2310852-2310871 | Msa0143380:intron | 45.0% |
| CCTCTAACAGAGCTACTTGA+CGG | + | chr1_4:2311004-2311023 | None:intergenic | 45.0% | |
| ! | ATCACTAGTCTCTAACCCGA+AGG | - | chr1_4:2311081-2311100 | Msa0143380:CDS | 45.0% |
| ACCCGAAGGAAATTTGTGCT+AGG | - | chr1_4:2311095-2311114 | Msa0143380:CDS | 45.0% | |
| CCCTAGCACAAATTTCCTTC+GGG | + | chr1_4:2311099-2311118 | None:intergenic | 45.0% | |
| CCCGAAGGAAATTTGTGCTA+GGG | - | chr1_4:2311096-2311115 | Msa0143380:CDS | 45.0% | |
| GCCCTAGCACAAATTTCCTT+CGG | + | chr1_4:2311100-2311119 | None:intergenic | 45.0% | |
| GACATATGCACTCGAGCAAA+TGG | - | chr1_4:2311321-2311340 | Msa0143380:CDS | 45.0% | |
| CAAGCTTCAAACTCAACTGC+TGG | - | chr1_4:2311346-2311365 | Msa0143380:CDS | 45.0% | |
| CAAACTCAACTGCTGGAGTT+CGG | - | chr1_4:2311353-2311372 | Msa0143380:CDS | 45.0% | |
| CTGGAGTTCGGACTATCAAA+CGG | - | chr1_4:2311365-2311384 | Msa0143380:CDS | 45.0% | |
| TGGAGTTCGGACTATCAAAC+GGG | - | chr1_4:2311366-2311385 | Msa0143380:intron | 45.0% | |
| GCAAACATTGCAAGATCTCG+GGG | - | chr1_4:2311393-2311412 | Msa0143380:intron | 45.0% | |
| CCCTCGGTTTCAAATTTACC+TGG | + | chr1_4:2311645-2311664 | None:intergenic | 45.0% | |
| ! | ACAGCTTTTGTTGGAACCCT+CGG | + | chr1_4:2311661-2311680 | None:intergenic | 45.0% |
| ATGGCTGAATCTCCAGAAAC+AGG | - | chr1_4:2311720-2311739 | Msa0143380:intron | 45.0% | |
| CAAAGAAATTTGGGGGGTGA+GGG | + | chr1_4:2311916-2311935 | None:intergenic | 45.0% | |
| TCAAAGAAATTTGGGGGGTG+AGG | + | chr1_4:2311917-2311936 | None:intergenic | 45.0% | |
| ! | CTTGTTGTGAAATACGTGGC+AGG | - | chr1_4:2311945-2311964 | Msa0143380:intron | 45.0% |
| GTGGCAGGTGCAATATAAAG+AGG | - | chr1_4:2311960-2311979 | Msa0143380:intron | 45.0% | |
| GTGCAATATAAAGAGGCCGA+AGG | - | chr1_4:2311967-2311986 | Msa0143380:intron | 45.0% | |
| GAAGGTTCATCTTTCCGTGA+TGG | - | chr1_4:2311985-2312004 | Msa0143380:intron | 45.0% | |
| !! | TCTTTCCGTGATGGATCCTA+CGG | - | chr1_4:2311994-2312013 | Msa0143380:intron | 45.0% |
| TTTCACCGTAGGATCCATCA+CGG | + | chr1_4:2312002-2312021 | None:intergenic | 45.0% | |
| CTGACACATTTGTTTCGTGG+TGG | - | chr1_4:2312112-2312131 | Msa0143380:intron | 45.0% | |
| ! | TTTGTTTCGTGGTGGGAATC+AGG | - | chr1_4:2312120-2312139 | Msa0143380:intron | 45.0% |
| !! | CCCGATTCGTTGAATTTTGG+AGG | - | chr1_4:2312157-2312176 | Msa0143380:intron | 45.0% |
| ! | TGTGGTGTACCTTGCGTTTT+TGG | + | chr1_4:2312308-2312327 | None:intergenic | 45.0% |
| ! | CTTTTATGAGCTGCTGTAGG+CGG | + | chr1_4:2312453-2312472 | None:intergenic | 45.0% |
| ! | GGTCTTTTATGAGCTGCTGT+AGG | + | chr1_4:2312456-2312475 | None:intergenic | 45.0% |
| !!! | TCCGAGGCCTTTTGTTTTCT+AGG | + | chr1_4:2312477-2312496 | None:intergenic | 45.0% |
| CCTCGGATCTTTAATTCCTC+CGG | - | chr1_4:2312490-2312509 | Msa0143380:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1_4:2312819-2312838 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr1_4:2312819-2312838 | Msa0143380:intron | 45.0% |
| CAAAACTCGCTCAAATGGCA+GGG | + | chr1_4:2312860-2312879 | None:intergenic | 45.0% | |
| GTCAACTCAGCATGTCATGA+AGG | + | chr1_4:2312950-2312969 | None:intergenic | 45.0% | |
| ! | TGAAGGAGGTAAGGTGTTAG+AGG | + | chr1_4:2313060-2313079 | None:intergenic | 45.0% |
| !! | TAAAAAAAAAAAAAATACAA+GGG | + | chr1_4:2312890-2312909 | None:intergenic | 5.0% |
| !! | ATAAAAAAAAAAAAAATACA+AGG | + | chr1_4:2312891-2312910 | None:intergenic | 5.0% |
| GAAACCCTAAATGGACGCGA+AGG | - | chr1_4:2308013-2308032 | Msa0143380:three_prime_UTR | 50.0% | |
| TGGGGTGCAGTGTACAAAAG+AGG | + | chr1_4:2309072-2309091 | None:intergenic | 50.0% | |
| TACCTAGATGTGGACCAAGG+AGG | - | chr1_4:2309255-2309274 | Msa0143380:CDS | 50.0% | |
| CCTCTACAGTCCGAGATGAT+GGG | + | chr1_4:2309348-2309367 | None:intergenic | 50.0% | |
| TCCTCTACAGTCCGAGATGA+TGG | + | chr1_4:2309349-2309368 | None:intergenic | 50.0% | |
| GTCCCTGTCATGTAGTGTTG+CGG | - | chr1_4:2309560-2309579 | Msa0143380:CDS | 50.0% | |
| TCCCTGTCATGTAGTGTTGC+GGG | - | chr1_4:2309561-2309580 | Msa0143380:CDS | 50.0% | |
| ! | TGCGGGCTATATTACTTGCC+AGG | - | chr1_4:2309578-2309597 | Msa0143380:CDS | 50.0% |
| ! | GCGGGCTATATTACTTGCCA+GGG | - | chr1_4:2309579-2309598 | Msa0143380:CDS | 50.0% |
| AGGATGTGTTGCAATGTCCC+CGG | + | chr1_4:2309614-2309633 | None:intergenic | 50.0% | |
| ACATGGCAATGGCTTAAGGC+AGG | + | chr1_4:2309739-2309758 | None:intergenic | 50.0% | |
| ! | TCTTGTTTGGGAGAGGACCA+TGG | + | chr1_4:2309842-2309861 | None:intergenic | 50.0% |
| CGAGTTACGGATGGCTTCTA+AGG | - | chr1_4:2310015-2310034 | Msa0143380:intron | 50.0% | |
| ! | CGCATTTTCGTTTGCATGGG+AGG | - | chr1_4:2310202-2310221 | Msa0143380:CDS | 50.0% |
| GATCTGTACTTGCACATGCC+TGG | - | chr1_4:2310667-2310686 | Msa0143380:intron | 50.0% | |
| CTGATGCAGAAGTTGCAGAG+AGG | - | chr1_4:2310752-2310771 | Msa0143380:intron | 50.0% | |
| ! | GCAGAAGGCACAACCATTTG+TGG | + | chr1_4:2310820-2310839 | None:intergenic | 50.0% |
| CTAACAGAGCTACTTGACGG+AGG | + | chr1_4:2311001-2311020 | None:intergenic | 50.0% | |
| ! | CCGTCAAGTAGCTCTGTTAG+AGG | - | chr1_4:2311001-2311020 | Msa0143380:intron | 50.0% |
| ! | AGTAGCTCTGTTAGAGGTGC+TGG | - | chr1_4:2311007-2311026 | Msa0143380:intron | 50.0% |
| TGAAACACCAGGCACACCAA+AGG | - | chr1_4:2312017-2312036 | Msa0143380:intron | 50.0% | |
| ! | GTTGTTTCAGGCGAAAGGGT+TGG | - | chr1_4:2312273-2312292 | Msa0143380:CDS | 50.0% |
| ! | AGGCGAAAGGGTTGGCAAAA+AGG | - | chr1_4:2312281-2312300 | Msa0143380:CDS | 50.0% |
| CCGGAGGAATTAAAGATCCG+AGG | + | chr1_4:2312493-2312512 | None:intergenic | 50.0% | |
| CCAAAACTCGCTCAAATGGC+AGG | + | chr1_4:2312861-2312880 | None:intergenic | 50.0% | |
| !! | CCTGCCATTTGAGCGAGTTT+TGG | - | chr1_4:2312858-2312877 | Msa0143380:CDS | 50.0% |
| GAGAGGGAAAATTGGAGCGG+AGG | - | chr1_4:2307940-2307959 | Msa0143380:three_prime_UTR | 55.0% | |
| ACCTGATGGCATTTCACGCG+AGG | - | chr1_4:2308118-2308137 | Msa0143380:intron | 55.0% | |
| ACCTCGCGTGAAATGCCATC+AGG | + | chr1_4:2308122-2308141 | None:intergenic | 55.0% | |
| CTCCTCCTTGGTCCACATCT+AGG | + | chr1_4:2309260-2309279 | None:intergenic | 55.0% | |
| CCCATCATCTCGGACTGTAG+AGG | - | chr1_4:2309345-2309364 | Msa0143380:intron | 55.0% | |
| GCCCGCAACACTACATGACA+GGG | + | chr1_4:2309565-2309584 | None:intergenic | 55.0% | |
| AGCCCGCAACACTACATGAC+AGG | + | chr1_4:2309566-2309585 | None:intergenic | 55.0% | |
| GGATCCTACGGTGAAACACC+AGG | - | chr1_4:2312006-2312025 | Msa0143380:intron | 55.0% | |
| TGTGCCTGGTGTTTCACCGT+AGG | + | chr1_4:2312013-2312032 | None:intergenic | 55.0% | |
| ACACCAGGCACACCAAAGGT+CGG | - | chr1_4:2312021-2312040 | Msa0143380:intron | 55.0% | |
| ! | TTTCCGACCTTTGGTGTGCC+TGG | + | chr1_4:2312027-2312046 | None:intergenic | 55.0% |
| CTTGCCAGGGCTGCATCTTC+CGG | - | chr1_4:2309592-2309611 | Msa0143380:CDS | 60.0% | |
| TTGCCAGGGCTGCATCTTCC+GGG | - | chr1_4:2309593-2309612 | Msa0143380:CDS | 60.0% | |
| ! | GCGAAAACGGGCACTGTCCA+TGG | - | chr1_4:2309822-2309841 | Msa0143380:intron | 60.0% |
| TGCCAGGGCTGCATCTTCCG+GGG | - | chr1_4:2309594-2309613 | Msa0143380:CDS | 65.0% | |
| GTTGCAGAGAGGGCTGTCCC+TGG | - | chr1_4:2310763-2310782 | Msa0143380:intron | 65.0% | |
| GTCCCCGGAAGATGCAGCCC+TGG | + | chr1_4:2309599-2309618 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 2307880 | 2313079 | 2307880 | ID=Msa0143380;Name=Msa0143380 |
| chr1_4 | mRNA | 2307880 | 2313079 | 2307880 | ID=Msa0143380-mRNA-1;Parent=Msa0143380;Name=Msa0143380-mRNA-1;_AED=0.29;_eAED=0.29;_QI=143|0.76|0.92|1|0.92|0.85|14|315|348 |
| chr1_4 | exon | 2307880 | 2308115 | 2307880 | ID=Msa0143380-mRNA-1:exon:1047;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2308377 | 2308521 | 2308377 | ID=Msa0143380-mRNA-1:exon:1046;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2308642 | 2308676 | 2308642 | ID=Msa0143380-mRNA-1:exon:1045;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2308781 | 2308817 | 2308781 | ID=Msa0143380-mRNA-1:exon:1044;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2308921 | 2308992 | 2308921 | ID=Msa0143380-mRNA-1:exon:1043;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2309218 | 2309313 | 2309218 | ID=Msa0143380-mRNA-1:exon:1042;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2309545 | 2309655 | 2309545 | ID=Msa0143380-mRNA-1:exon:1041;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2310131 | 2310244 | 2310131 | ID=Msa0143380-mRNA-1:exon:1040;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2310923 | 2310970 | 2310923 | ID=Msa0143380-mRNA-1:exon:1039;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2311074 | 2311166 | 2311074 | ID=Msa0143380-mRNA-1:exon:1038;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2311317 | 2311384 | 2311317 | ID=Msa0143380-mRNA-1:exon:1037;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2311568 | 2311697 | 2311568 | ID=Msa0143380-mRNA-1:exon:1036;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2312269 | 2312328 | 2312269 | ID=Msa0143380-mRNA-1:exon:1035;Parent=Msa0143380-mRNA-1 |
| chr1_4 | exon | 2312820 | 2313079 | 2312820 | ID=Msa0143380-mRNA-1:exon:1034;Parent=Msa0143380-mRNA-1 |
| chr1_4 | five_prime_UTR | 2312937 | 2313079 | 2312937 | ID=Msa0143380-mRNA-1:five_prime_utr;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2312820 | 2312936 | 2312820 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2312269 | 2312328 | 2312269 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2311568 | 2311697 | 2311568 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2311317 | 2311384 | 2311317 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2311074 | 2311166 | 2311074 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2310923 | 2310970 | 2310923 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2310131 | 2310244 | 2310131 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2309545 | 2309655 | 2309545 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2309218 | 2309313 | 2309218 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2308921 | 2308992 | 2308921 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2308781 | 2308817 | 2308781 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2308642 | 2308676 | 2308642 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | CDS | 2308456 | 2308521 | 2308456 | ID=Msa0143380-mRNA-1:cds;Parent=Msa0143380-mRNA-1 |
| chr1_4 | three_prime_UTR | 2308377 | 2308455 | 2308377 | ID=Msa0143380-mRNA-1:three_prime_utr;Parent=Msa0143380-mRNA-1 |
| chr1_4 | three_prime_UTR | 2307880 | 2308115 | 2307880 | ID=Msa0143380-mRNA-1:three_prime_utr;Parent=Msa0143380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
