AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1331610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331610 MtrunA17_Chr4g0061431 95.217 230 11 0 1 230 1 230 3.84e-165 454
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 59 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATGGGAGGTTGGAATATT+TGG 0.159434 8_4:+51189459 Msa1331600:three_prime_UTR
CCTTGCTGTGATTCTGAAAA+AGG 0.193262 8_4:+51189293 Msa1331600:three_prime_UTR
GTGGGTTGGTTTGTAAATTA+AGG 0.194932 8_4:+51189517 Msa1331600:three_prime_UTR
TTTGGAATTGGTTTGTATAT+TGG 0.217078 8_4:-51189141 Msa1331610:CDS
GGAATGGAGAAATCAATATT+TGG 0.260276 8_4:-51189159 Msa1331610:CDS
TCTTGATGATTCTAGTATTT+CGG 0.269601 8_4:+51189353 Msa1331600:three_prime_UTR
ATCTAACTCACATGCTTGTC+TGG 0.291025 8_4:-51187758 Msa1331610:CDS
TTCTGATCTTTACCATTCTA+AGG 0.302171 8_4:-51189052 Msa1331610:intron
TGGTTTGTAAATTAAGGTTC+TGG 0.319123 8_4:+51189523 Msa1331600:three_prime_UTR
AAGGTTCTGGCTTAGCTTCA+TGG 0.326775 8_4:+51189536 Msa1331600:three_prime_UTR
GAGAAATCAATATTTGGAAT+TGG 0.332954 8_4:-51189153 Msa1331610:CDS
TCTGGTTTGGATTGGTGGGT+TGG 0.337391 8_4:+51189503 Msa1331600:three_prime_UTR
GAAGGGGAGGTAGGGAGAGA+TGG 0.340377 8_4:+51189442 Msa1331600:three_prime_UTR
TTGAAGAACTTATGATAAAA+TGG 0.367734 8_4:-51187704 Msa1331610:CDS
AAGGGGAGGTAGGGAGAGAT+GGG 0.392672 8_4:+51189443 Msa1331600:three_prime_UTR
AAGAGGGAGATGATGAAGTC+TGG 0.398949 8_4:+51189485 Msa1331600:three_prime_UTR
GGAGATGATGAAGTCTGGTT+TGG 0.401750 8_4:+51189490 Msa1331600:three_prime_UTR
GGTAGGGAGAGATGGGAGGT+TGG 0.408763 8_4:+51189450 Msa1331600:three_prime_UTR
TGAAGTCTGGTTTGGATTGG+TGG 0.432119 8_4:+51189498 Msa1331600:three_prime_UTR
AAGTGACTGGTTCATCTGTT+GGG 0.435909 8_4:-51187782 Msa1331610:CDS
GGGAGGTAGGGAGAGATGGG+AGG 0.445867 8_4:+51189446 Msa1331600:three_prime_UTR
TATCATAAGTTCTTCAACAC+TGG 0.457160 8_4:+51187710 Msa1331600:three_prime_UTR
GAAGTCTGGTTTGGATTGGT+GGG 0.474714 8_4:+51189499 Msa1331600:three_prime_UTR
GTTGGAATATTTGGTGAAAG+AGG 0.477675 8_4:+51189468 Msa1331600:three_prime_UTR
TTGGAATATTTGGTGAAAGA+GGG 0.484949 8_4:+51189469 Msa1331600:three_prime_UTR
AAGAGGTAATATTCTTCACT+TGG 0.488829 8_4:-51189211 Msa1331610:CDS
GCTTGGAAAAGCCGAGGGAT+TGG 0.488915 8_4:-51189250 Msa1331610:CDS
GGATTGGTAAGAATGTGGTT+TGG 0.503248 8_4:-51189234 Msa1331610:CDS
ATTAGGTTCTACACAAGACT+TGG 0.507328 8_4:-51187822 Msa1331610:CDS
CAGAATCACAGCAAGGAGCT+TGG 0.509095 8_4:-51189286 Msa1331610:CDS
GTAAGAATGTGGTTTGGAAG+AGG 0.511446 8_4:-51189228 Msa1331610:CDS
TCTAACTCACATGCTTGTCT+GGG 0.520091 8_4:-51187757 Msa1331610:CDS
GAAGTGACTGGTTCATCTGT+TGG 0.525549 8_4:-51187783 Msa1331610:CDS
ACAAAGAGAAACACTTGGAA+TGG 0.525859 8_4:-51189175 Msa1331610:CDS
ATGCTTGTCTGGGGAGGTGT+TGG 0.529024 8_4:-51187747 Msa1331610:CDS
TCTAGTATTTCGGACATGGT+TGG 0.545589 8_4:+51189363 Msa1331600:three_prime_UTR
TGATGAAGTCTGGTTTGGAT+TGG 0.549707 8_4:+51189495 Msa1331600:three_prime_UTR
GTCCTAGAGTTTGGAGCTGA+AGG 0.555399 8_4:+51189316 Msa1331600:three_prime_UTR
GAAAGAAGAGGACCTTAGAA+TGG 0.557524 8_4:+51189040 Msa1331600:intron
GGGAGGTGTTGGTACTCGCA+TGG 0.557882 8_4:-51187736 Msa1331610:CDS
TGATTCTAGTATTTCGGACA+TGG 0.558688 8_4:+51189359 Msa1331600:three_prime_UTR
CCACATTCTTACCAATCCCT+CGG 0.564065 8_4:+51189239 Msa1331600:three_prime_UTR
TTGGTAACAGATAACGAGCT+TGG 0.577020 8_4:-51189267 Msa1331610:CDS
GTGTGTAATGCATGCTACTT+CGG 0.581801 8_4:+51187392 Msa1331600:three_prime_UTR
GACCTTCAGCTCCAAACTCT+AGG 0.585104 8_4:-51189318 Msa1331610:CDS
TGGCAATGAAATTGATTCGT+TGG 0.585470 8_4:+51189383 Msa1331600:three_prime_UTR
ACTCACATGCTTGTCTGGGG+AGG 0.587828 8_4:-51187753 Msa1331610:CDS
AAACCTGTGTATGAAGTGAC+TGG 0.589730 8_4:-51187795 Msa1331610:CDS
TTAGGTTCTACACAAGACTT+GGG 0.594680 8_4:-51187821 Msa1331610:CDS
CCGAGGGATTGGTAAGAATG+TGG 0.599865 8_4:-51189239 Msa1331610:CDS
ATTAGACATGGATATGATTG+TGG 0.601421 8_4:-51189108 Msa1331610:CDS
GGAGCTGTTGCTATTAGACA+TGG 0.604767 8_4:-51189120 Msa1331610:CDS
TAACGAGCTTGGAAAAGCCG+AGG 0.622512 8_4:-51189256 Msa1331610:CDS
GAACCAGTCACTTCATACAC+AGG 0.629180 8_4:+51187792 Msa1331600:three_prime_UTR
AACGAGCTTGGAAAAGCCGA+GGG 0.631401 8_4:-51189255 Msa1331610:CDS
GAAATACTAGAATCATCAAG+AGG 0.638232 8_4:-51189351 Msa1331610:CDS
AAACTACAAAGAGAAACACT+TGG 0.642328 8_4:-51189180 Msa1331610:CDS
AGTGACTGGTTCATCTGTTG+GGG 0.651858 8_4:-51187781 Msa1331610:CDS
CTAACTCACATGCTTGTCTG+GGG 0.662716 8_4:-51187756 Msa1331610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAGATGTAAAATGATTT+TGG - chr8_4:51188067-51188086 Msa1331610:intron 15.0%
!! GTTAACACAATTTAAATAAA+TGG - chr8_4:51188893-51188912 Msa1331610:intron 15.0%
!!! TTTTTTAATAACAGTTGATT+AGG - chr8_4:51189101-51189120 Msa1331610:CDS 15.0%
!! AATTATCATGATATACATTT+AGG + chr8_4:51189453-51189472 Msa1331600:three_prime_UTR 15.0%
!!! TAAAAGATGTAAAATGATTT+TGG - chr8_4:51188067-51188086 Msa1331610:intron 15.0%
!! GTTAACACAATTTAAATAAA+TGG - chr8_4:51188893-51188912 Msa1331610:intron 15.0%
!!! TTTTTTAATAACAGTTGATT+AGG - chr8_4:51189101-51189120 Msa1331610:CDS 15.0%
!! AATTATCATGATATACATTT+AGG + chr8_4:51189453-51189472 Msa1331600:three_prime_UTR 15.0%
!! CAATATAAAAGTTAAGGATA+AGG + chr8_4:51187929-51187948 Msa1331600:intron 20.0%
!! AATTTCATTAACCATGAATT+TGG - chr8_4:51188954-51188973 Msa1331610:intron 20.0%
!! TTGAAGAACTTATGATAAAA+TGG - chr8_4:51189236-51189255 Msa1331610:CDS 20.0%
!! CAATATAAAAGTTAAGGATA+AGG + chr8_4:51187929-51187948 Msa1331600:intron 20.0%
!! AATTTCATTAACCATGAATT+TGG - chr8_4:51188954-51188973 Msa1331610:intron 20.0%
!! TTGAAGAACTTATGATAAAA+TGG - chr8_4:51189236-51189255 Msa1331610:CDS 20.0%
!! TTTGAATCTGTTCTTTTGAA+GGG + chr8_4:51187518-51187537 Msa1331600:intron 25.0%
!! ATTTGAATCTGTTCTTTTGA+AGG + chr8_4:51187519-51187538 Msa1331600:intron 25.0%
!! TCTTGATGATTCTAGTATTT+CGG + chr8_4:51187590-51187609 Msa1331600:intron 25.0%
!! GAGAAATCAATATTTGGAAT+TGG - chr8_4:51187787-51187806 Msa1331610:CDS 25.0%
!!! TTTGGAATTGGTTTGTATAT+TGG - chr8_4:51187799-51187818 Msa1331610:CDS 25.0%
! ATAAAAGTTAAGGATAAGGT+TGG + chr8_4:51187925-51187944 Msa1331600:intron 25.0%
! TGCAGACAATATAAAAGTTA+AGG + chr8_4:51187935-51187954 Msa1331600:intron 25.0%
!!! GTCATTTTAATAAGAAAGTC+CGG - chr8_4:51188136-51188155 Msa1331610:intron 25.0%
!! TAAGTTCTTTTTGTACATTC+TGG - chr8_4:51188461-51188480 Msa1331610:intron 25.0%
! CAAAAACACAAAAATCAGAA+TGG + chr8_4:51188531-51188550 Msa1331600:intron 25.0%
!!! TTCTGATTTTTGTGTTTTTG+CGG - chr8_4:51188531-51188550 Msa1331610:intron 25.0%
! GTTATAGAATTAGGATTGTT+AGG - chr8_4:51188705-51188724 Msa1331610:intron 25.0%
!!! GGTTTTTTAATGAGACAATT+TGG - chr8_4:51188729-51188748 Msa1331610:intron 25.0%
! TCAGCAAATATTATTTAGCT+AGG + chr8_4:51188830-51188849 Msa1331600:intron 25.0%
! CTTATATATGTTGCATAAGA+TGG - chr8_4:51189303-51189322 Msa1331610:CDS 25.0%
!! TTTGAATCTGTTCTTTTGAA+GGG + chr8_4:51187518-51187537 Msa1331600:intron 25.0%
!! ATTTGAATCTGTTCTTTTGA+AGG + chr8_4:51187519-51187538 Msa1331600:intron 25.0%
!! TCTTGATGATTCTAGTATTT+CGG + chr8_4:51187590-51187609 Msa1331600:intron 25.0%
!! GAGAAATCAATATTTGGAAT+TGG - chr8_4:51187787-51187806 Msa1331610:CDS 25.0%
!!! TTTGGAATTGGTTTGTATAT+TGG - chr8_4:51187799-51187818 Msa1331610:CDS 25.0%
! ATAAAAGTTAAGGATAAGGT+TGG + chr8_4:51187925-51187944 Msa1331600:intron 25.0%
! TGCAGACAATATAAAAGTTA+AGG + chr8_4:51187935-51187954 Msa1331600:intron 25.0%
!!! GTCATTTTAATAAGAAAGTC+CGG - chr8_4:51188136-51188155 Msa1331610:intron 25.0%
!! TAAGTTCTTTTTGTACATTC+TGG - chr8_4:51188461-51188480 Msa1331610:intron 25.0%
! CAAAAACACAAAAATCAGAA+TGG + chr8_4:51188531-51188550 Msa1331600:intron 25.0%
!!! TTCTGATTTTTGTGTTTTTG+CGG - chr8_4:51188531-51188550 Msa1331610:intron 25.0%
! GTTATAGAATTAGGATTGTT+AGG - chr8_4:51188705-51188724 Msa1331610:intron 25.0%
!!! GGTTTTTTAATGAGACAATT+TGG - chr8_4:51188729-51188748 Msa1331610:intron 25.0%
! TCAGCAAATATTATTTAGCT+AGG + chr8_4:51188830-51188849 Msa1331600:intron 25.0%
! CTTATATATGTTGCATAAGA+TGG - chr8_4:51189303-51189322 Msa1331610:CDS 25.0%
! TGGTTTGTAAATTAAGGTTC+TGG + chr8_4:51187420-51187439 Msa1331600:intron 30.0%
! TTGGAATATTTGGTGAAAGA+GGG + chr8_4:51187474-51187493 Msa1331600:intron 30.0%
!! TTGAATCTGTTCTTTTGAAG+GGG + chr8_4:51187517-51187536 Msa1331600:intron 30.0%
GAAATACTAGAATCATCAAG+AGG - chr8_4:51187589-51187608 Msa1331610:intron 30.0%
AAGAGGTAATATTCTTCACT+TGG - chr8_4:51187729-51187748 Msa1331610:CDS 30.0%
AAACTACAAAGAGAAACACT+TGG - chr8_4:51187760-51187779 Msa1331610:CDS 30.0%
GGAATGGAGAAATCAATATT+TGG - chr8_4:51187781-51187800 Msa1331610:CDS 30.0%
ATTAGACATGGATATGATTG+TGG - chr8_4:51187832-51187851 Msa1331610:intron 30.0%
TTCTGATCTTTACCATTCTA+AGG - chr8_4:51187888-51187907 Msa1331610:intron 30.0%
! CATCTTTTATACACAGTAAG+TGG + chr8_4:51188056-51188075 Msa1331600:intron 30.0%
AAATGATTCTGTATGTCCAT+TGG - chr8_4:51188097-51188116 Msa1331610:intron 30.0%
AATGATTCTGTATGTCCATT+GGG - chr8_4:51188098-51188117 Msa1331610:intron 30.0%
! TTTTAATAAGAAAGTCCGGA+AGG - chr8_4:51188140-51188159 Msa1331610:intron 30.0%
TTTAATAAGAAAGTCCGGAA+GGG - chr8_4:51188141-51188160 Msa1331610:intron 30.0%
GTTATTTGGAAAGCTAGAAA+TGG - chr8_4:51188195-51188214 Msa1331610:intron 30.0%
TGGAATGATCTTTAACAAAG+CGG - chr8_4:51188215-51188234 Msa1331610:intron 30.0%
TCCTGTTCTGTTATAGAATT+AGG - chr8_4:51188696-51188715 Msa1331610:intron 30.0%
TCCTAATTCTATAACAGAAC+AGG + chr8_4:51188700-51188719 Msa1331600:intron 30.0%
ATAGAATTAGGATTGTTAGG+AGG - chr8_4:51188708-51188727 Msa1331610:intron 30.0%
TTTGAACACTTACTATGAGA+CGG - chr8_4:51189019-51189038 Msa1331610:intron 30.0%
TATCATAAGTTCTTCAACAC+TGG + chr8_4:51189233-51189252 Msa1331600:three_prime_UTR 30.0%
! AATAGACAAGTTTTACAGAC+AGG + chr8_4:51189337-51189356 Msa1331600:three_prime_UTR 30.0%
! TCATGATATACATTTAGGAC+AGG + chr8_4:51189448-51189467 Msa1331600:three_prime_UTR 30.0%
! TGGTTTGTAAATTAAGGTTC+TGG + chr8_4:51187420-51187439 Msa1331600:intron 30.0%
! TTGGAATATTTGGTGAAAGA+GGG + chr8_4:51187474-51187493 Msa1331600:intron 30.0%
!! TTGAATCTGTTCTTTTGAAG+GGG + chr8_4:51187517-51187536 Msa1331600:intron 30.0%
GAAATACTAGAATCATCAAG+AGG - chr8_4:51187589-51187608 Msa1331610:intron 30.0%
AAGAGGTAATATTCTTCACT+TGG - chr8_4:51187729-51187748 Msa1331610:CDS 30.0%
AAACTACAAAGAGAAACACT+TGG - chr8_4:51187760-51187779 Msa1331610:CDS 30.0%
GGAATGGAGAAATCAATATT+TGG - chr8_4:51187781-51187800 Msa1331610:CDS 30.0%
ATTAGACATGGATATGATTG+TGG - chr8_4:51187832-51187851 Msa1331610:intron 30.0%
TTCTGATCTTTACCATTCTA+AGG - chr8_4:51187888-51187907 Msa1331610:intron 30.0%
! CATCTTTTATACACAGTAAG+TGG + chr8_4:51188056-51188075 Msa1331600:intron 30.0%
AAATGATTCTGTATGTCCAT+TGG - chr8_4:51188097-51188116 Msa1331610:intron 30.0%
AATGATTCTGTATGTCCATT+GGG - chr8_4:51188098-51188117 Msa1331610:intron 30.0%
! TTTTAATAAGAAAGTCCGGA+AGG - chr8_4:51188140-51188159 Msa1331610:intron 30.0%
TTTAATAAGAAAGTCCGGAA+GGG - chr8_4:51188141-51188160 Msa1331610:intron 30.0%
GTTATTTGGAAAGCTAGAAA+TGG - chr8_4:51188195-51188214 Msa1331610:intron 30.0%
TGGAATGATCTTTAACAAAG+CGG - chr8_4:51188215-51188234 Msa1331610:intron 30.0%
TCCTGTTCTGTTATAGAATT+AGG - chr8_4:51188696-51188715 Msa1331610:intron 30.0%
TCCTAATTCTATAACAGAAC+AGG + chr8_4:51188700-51188719 Msa1331600:intron 30.0%
ATAGAATTAGGATTGTTAGG+AGG - chr8_4:51188708-51188727 Msa1331610:intron 30.0%
TTTGAACACTTACTATGAGA+CGG - chr8_4:51189019-51189038 Msa1331610:intron 30.0%
TATCATAAGTTCTTCAACAC+TGG + chr8_4:51189233-51189252 Msa1331600:three_prime_UTR 30.0%
! AATAGACAAGTTTTACAGAC+AGG + chr8_4:51189337-51189356 Msa1331600:three_prime_UTR 30.0%
! TCATGATATACATTTAGGAC+AGG + chr8_4:51189448-51189467 Msa1331600:three_prime_UTR 30.0%
!! GTGGGTTGGTTTGTAAATTA+AGG + chr8_4:51187426-51187445 Msa1331600:intron 35.0%
! GTTGGAATATTTGGTGAAAG+AGG + chr8_4:51187475-51187494 Msa1331600:intron 35.0%
!! TGGCAATGAAATTGATTCGT+TGG + chr8_4:51187560-51187579 Msa1331600:intron 35.0%
TGATTCTAGTATTTCGGACA+TGG + chr8_4:51187584-51187603 Msa1331600:intron 35.0%
! CTTGCTGTGATTCTGAAAAA+GGG + chr8_4:51187649-51187668 Msa1331600:intron 35.0%
ACAAAGAGAAACACTTGGAA+TGG - chr8_4:51187765-51187784 Msa1331610:CDS 35.0%
TCTTTAACAAAGCGGTTGTA+AGG - chr8_4:51188223-51188242 Msa1331610:intron 35.0%
GTTAAACCGCTTTAATACTC+CGG - chr8_4:51188293-51188312 Msa1331610:intron 35.0%
TTATCTCATCAAACACTCCA+CGG + chr8_4:51188349-51188368 Msa1331600:intron 35.0%
ACAGAAGAAGAAAACCAGTA+GGG + chr8_4:51188422-51188441 Msa1331600:intron 35.0%
AACAGAAGAAGAAAACCAGT+AGG + chr8_4:51188423-51188442 Msa1331600:intron 35.0%
! TCCTTTTCCTTTTTTTCCAG+CGG - chr8_4:51188598-51188617 Msa1331610:intron 35.0%
! GGTTTAGGCACTTTTCATTT+TGG - chr8_4:51188658-51188677 Msa1331610:intron 35.0%
ATTAACCATGAATTTGGACG+TGG - chr8_4:51188960-51188979 Msa1331610:intron 35.0%
GTTTGAACACCTGCAAATTA+TGG + chr8_4:51188990-51189009 Msa1331600:intron 35.0%
ATTAGGTTCTACACAAGACT+TGG - chr8_4:51189118-51189137 Msa1331610:CDS 35.0%
TTAGGTTCTACACAAGACTT+GGG - chr8_4:51189119-51189138 Msa1331610:CDS 35.0%
! AGATATCTTCTAGCTAGCAA+AGG - chr8_4:51189406-51189425 Msa1331610:CDS 35.0%
!! GTGGGTTGGTTTGTAAATTA+AGG + chr8_4:51187426-51187445 Msa1331600:intron 35.0%
! GTTGGAATATTTGGTGAAAG+AGG + chr8_4:51187475-51187494 Msa1331600:intron 35.0%
!! TGGCAATGAAATTGATTCGT+TGG + chr8_4:51187560-51187579 Msa1331600:intron 35.0%
TGATTCTAGTATTTCGGACA+TGG + chr8_4:51187584-51187603 Msa1331600:intron 35.0%
! CTTGCTGTGATTCTGAAAAA+GGG + chr8_4:51187649-51187668 Msa1331600:intron 35.0%
ACAAAGAGAAACACTTGGAA+TGG - chr8_4:51187765-51187784 Msa1331610:CDS 35.0%
TCTTTAACAAAGCGGTTGTA+AGG - chr8_4:51188223-51188242 Msa1331610:intron 35.0%
GTTAAACCGCTTTAATACTC+CGG - chr8_4:51188293-51188312 Msa1331610:intron 35.0%
TTATCTCATCAAACACTCCA+CGG + chr8_4:51188349-51188368 Msa1331600:intron 35.0%
ACAGAAGAAGAAAACCAGTA+GGG + chr8_4:51188422-51188441 Msa1331600:intron 35.0%
AACAGAAGAAGAAAACCAGT+AGG + chr8_4:51188423-51188442 Msa1331600:intron 35.0%
! TCCTTTTCCTTTTTTTCCAG+CGG - chr8_4:51188598-51188617 Msa1331610:intron 35.0%
! GGTTTAGGCACTTTTCATTT+TGG - chr8_4:51188658-51188677 Msa1331610:intron 35.0%
ATTAACCATGAATTTGGACG+TGG - chr8_4:51188960-51188979 Msa1331610:intron 35.0%
GTTTGAACACCTGCAAATTA+TGG + chr8_4:51188990-51189009 Msa1331600:intron 35.0%
ATTAGGTTCTACACAAGACT+TGG - chr8_4:51189118-51189137 Msa1331610:CDS 35.0%
TTAGGTTCTACACAAGACTT+GGG - chr8_4:51189119-51189138 Msa1331610:CDS 35.0%
! AGATATCTTCTAGCTAGCAA+AGG - chr8_4:51189406-51189425 Msa1331610:CDS 35.0%
!! TGATGAAGTCTGGTTTGGAT+TGG + chr8_4:51187448-51187467 Msa1331600:intron 40.0%
AGATGGGAGGTTGGAATATT+TGG + chr8_4:51187484-51187503 Msa1331600:intron 40.0%
!! AATCTGTTCTTTTGAAGGGG+AGG + chr8_4:51187514-51187533 Msa1331600:intron 40.0%
TCTAGTATTTCGGACATGGT+TGG + chr8_4:51187580-51187599 Msa1331600:intron 40.0%
TGAAAAAGGGTCCTAGAGTT+TGG + chr8_4:51187636-51187655 Msa1331600:intron 40.0%
! CCTTGCTGTGATTCTGAAAA+AGG + chr8_4:51187650-51187669 Msa1331600:intron 40.0%
!!! CCTTTTTCAGAATCACAGCA+AGG - chr8_4:51187647-51187666 Msa1331610:intron 40.0%
! TTGGTAACAGATAACGAGCT+TGG - chr8_4:51187673-51187692 Msa1331610:intron 40.0%
! GGATTGGTAAGAATGTGGTT+TGG - chr8_4:51187706-51187725 Msa1331610:CDS 40.0%
! GTAAGAATGTGGTTTGGAAG+AGG - chr8_4:51187712-51187731 Msa1331610:CDS 40.0%
GAAAGAAGAGGACCTTAGAA+TGG + chr8_4:51187903-51187922 Msa1331600:intron 40.0%
AGGATAAGGTTGGAAAGAAG+AGG + chr8_4:51187915-51187934 Msa1331600:intron 40.0%
TGTATGTCCATTGGGAATGT+TGG - chr8_4:51188106-51188125 Msa1331610:intron 40.0%
GTATGTCCATTGGGAATGTT+GGG - chr8_4:51188107-51188126 Msa1331610:intron 40.0%
! AAGCTGCGATTTGGGTTATT+TGG - chr8_4:51188181-51188200 Msa1331610:intron 40.0%
TTAACAAAGCGGTTGTAAGG+TGG - chr8_4:51188226-51188245 Msa1331610:intron 40.0%
TAACAAAGCGGTTGTAAGGT+GGG - chr8_4:51188227-51188246 Msa1331610:intron 40.0%
GGAATTAGTGGAAGAGGTTA+AGG - chr8_4:51188251-51188270 Msa1331610:intron 40.0%
TATCTCATCAAACACTCCAC+GGG + chr8_4:51188348-51188367 Msa1331600:intron 40.0%
!! CATTCTGGCTTTCTGTTCTT+CGG - chr8_4:51188476-51188495 Msa1331610:intron 40.0%
!! TTTGCGGCTTTGTTTACTTC+TGG - chr8_4:51188547-51188566 Msa1331610:intron 40.0%
!! GGCTTTGTTTACTTCTGGTT+AGG - chr8_4:51188552-51188571 Msa1331610:intron 40.0%
ACCGCTGGAAAAAAAGGAAA+AGG + chr8_4:51188602-51188621 Msa1331600:intron 40.0%
! TTTTCCTTTTTTTCCAGCGG+TGG - chr8_4:51188601-51188620 Msa1331610:intron 40.0%
!!! GGTTTGTTTTGTAGGCAGTT+GGG - chr8_4:51188635-51188654 Msa1331610:intron 40.0%
!!! GTTTGTTTTGTAGGCAGTTG+GGG - chr8_4:51188636-51188655 Msa1331610:intron 40.0%
!!! TTTGTTTTGTAGGCAGTTGG+GGG - chr8_4:51188637-51188656 Msa1331610:intron 40.0%
TGATTATGTGCCTTTGATCG+TGG - chr8_4:51188752-51188771 Msa1331610:intron 40.0%
GATTATGTGCCTTTGATCGT+GGG - chr8_4:51188753-51188772 Msa1331610:intron 40.0%
!!! GTACACTTTTTCCTCCTTAG+CGG - chr8_4:51188783-51188802 Msa1331610:intron 40.0%
!!! TACACTTTTTCCTCCTTAGC+GGG - chr8_4:51188784-51188803 Msa1331610:intron 40.0%
GTTAACCACGTCCAAATTCA+TGG + chr8_4:51188968-51188987 Msa1331600:intron 40.0%
! CGTGGTTAACCATAATTTGC+AGG - chr8_4:51188978-51188997 Msa1331610:intron 40.0%
AACACTTACTATGAGACGGA+GGG - chr8_4:51189023-51189042 Msa1331610:intron 40.0%
GGAGTAGTAAGATGGTACAT+GGG - chr8_4:51189044-51189063 Msa1331610:intron 40.0%
AAACCTGTGTATGAAGTGAC+TGG - chr8_4:51189145-51189164 Msa1331610:CDS 40.0%
! AAGTGACTGGTTCATCTGTT+GGG - chr8_4:51189158-51189177 Msa1331610:CDS 40.0%
ATCTAACTCACATGCTTGTC+TGG - chr8_4:51189182-51189201 Msa1331610:CDS 40.0%
TCTAACTCACATGCTTGTCT+GGG - chr8_4:51189183-51189202 Msa1331610:CDS 40.0%
!! TGATGAAGTCTGGTTTGGAT+TGG + chr8_4:51187448-51187467 Msa1331600:intron 40.0%
AGATGGGAGGTTGGAATATT+TGG + chr8_4:51187484-51187503 Msa1331600:intron 40.0%
!! AATCTGTTCTTTTGAAGGGG+AGG + chr8_4:51187514-51187533 Msa1331600:intron 40.0%
TCTAGTATTTCGGACATGGT+TGG + chr8_4:51187580-51187599 Msa1331600:intron 40.0%
TGAAAAAGGGTCCTAGAGTT+TGG + chr8_4:51187636-51187655 Msa1331600:intron 40.0%
! CCTTGCTGTGATTCTGAAAA+AGG + chr8_4:51187650-51187669 Msa1331600:intron 40.0%
!!! CCTTTTTCAGAATCACAGCA+AGG - chr8_4:51187647-51187666 Msa1331610:intron 40.0%
! TTGGTAACAGATAACGAGCT+TGG - chr8_4:51187673-51187692 Msa1331610:intron 40.0%
! GGATTGGTAAGAATGTGGTT+TGG - chr8_4:51187706-51187725 Msa1331610:CDS 40.0%
! GTAAGAATGTGGTTTGGAAG+AGG - chr8_4:51187712-51187731 Msa1331610:CDS 40.0%
GAAAGAAGAGGACCTTAGAA+TGG + chr8_4:51187903-51187922 Msa1331600:intron 40.0%
AGGATAAGGTTGGAAAGAAG+AGG + chr8_4:51187915-51187934 Msa1331600:intron 40.0%
TGTATGTCCATTGGGAATGT+TGG - chr8_4:51188106-51188125 Msa1331610:intron 40.0%
GTATGTCCATTGGGAATGTT+GGG - chr8_4:51188107-51188126 Msa1331610:intron 40.0%
! AAGCTGCGATTTGGGTTATT+TGG - chr8_4:51188181-51188200 Msa1331610:intron 40.0%
TTAACAAAGCGGTTGTAAGG+TGG - chr8_4:51188226-51188245 Msa1331610:intron 40.0%
TAACAAAGCGGTTGTAAGGT+GGG - chr8_4:51188227-51188246 Msa1331610:intron 40.0%
GGAATTAGTGGAAGAGGTTA+AGG - chr8_4:51188251-51188270 Msa1331610:intron 40.0%
TATCTCATCAAACACTCCAC+GGG + chr8_4:51188348-51188367 Msa1331600:intron 40.0%
!! CATTCTGGCTTTCTGTTCTT+CGG - chr8_4:51188476-51188495 Msa1331610:intron 40.0%
!! TTTGCGGCTTTGTTTACTTC+TGG - chr8_4:51188547-51188566 Msa1331610:intron 40.0%
!! GGCTTTGTTTACTTCTGGTT+AGG - chr8_4:51188552-51188571 Msa1331610:intron 40.0%
ACCGCTGGAAAAAAAGGAAA+AGG + chr8_4:51188602-51188621 Msa1331600:intron 40.0%
! TTTTCCTTTTTTTCCAGCGG+TGG - chr8_4:51188601-51188620 Msa1331610:intron 40.0%
!!! GGTTTGTTTTGTAGGCAGTT+GGG - chr8_4:51188635-51188654 Msa1331610:intron 40.0%
!!! GTTTGTTTTGTAGGCAGTTG+GGG - chr8_4:51188636-51188655 Msa1331610:intron 40.0%
!!! TTTGTTTTGTAGGCAGTTGG+GGG - chr8_4:51188637-51188656 Msa1331610:intron 40.0%
TGATTATGTGCCTTTGATCG+TGG - chr8_4:51188752-51188771 Msa1331610:intron 40.0%
GATTATGTGCCTTTGATCGT+GGG - chr8_4:51188753-51188772 Msa1331610:intron 40.0%
!!! GTACACTTTTTCCTCCTTAG+CGG - chr8_4:51188783-51188802 Msa1331610:intron 40.0%
!!! TACACTTTTTCCTCCTTAGC+GGG - chr8_4:51188784-51188803 Msa1331610:intron 40.0%
GTTAACCACGTCCAAATTCA+TGG + chr8_4:51188968-51188987 Msa1331600:intron 40.0%
! CGTGGTTAACCATAATTTGC+AGG - chr8_4:51188978-51188997 Msa1331610:intron 40.0%
AACACTTACTATGAGACGGA+GGG - chr8_4:51189023-51189042 Msa1331610:intron 40.0%
GGAGTAGTAAGATGGTACAT+GGG - chr8_4:51189044-51189063 Msa1331610:intron 40.0%
AAACCTGTGTATGAAGTGAC+TGG - chr8_4:51189145-51189164 Msa1331610:CDS 40.0%
! AAGTGACTGGTTCATCTGTT+GGG - chr8_4:51189158-51189177 Msa1331610:CDS 40.0%
ATCTAACTCACATGCTTGTC+TGG - chr8_4:51189182-51189201 Msa1331610:CDS 40.0%
TCTAACTCACATGCTTGTCT+GGG - chr8_4:51189183-51189202 Msa1331610:CDS 40.0%
!! GAAGTCTGGTTTGGATTGGT+GGG + chr8_4:51187444-51187463 Msa1331600:intron 45.0%
!! TGAAGTCTGGTTTGGATTGG+TGG + chr8_4:51187445-51187464 Msa1331600:intron 45.0%
GGAGATGATGAAGTCTGGTT+TGG + chr8_4:51187453-51187472 Msa1331600:intron 45.0%
AAGAGGGAGATGATGAAGTC+TGG + chr8_4:51187458-51187477 Msa1331600:intron 45.0%
!! GTTCTTTTGAAGGGGAGGTA+GGG + chr8_4:51187509-51187528 Msa1331600:intron 45.0%
!! TGTTCTTTTGAAGGGGAGGT+AGG + chr8_4:51187510-51187529 Msa1331600:intron 45.0%
CCACATTCTTACCAATCCCT+CGG + chr8_4:51187704-51187723 Msa1331600:three_prime_UTR 45.0%
! GGAGCTGTTGCTATTAGACA+TGG - chr8_4:51187820-51187839 Msa1331610:CDS 45.0%
AAATCATCCGCAATCCCTTC+CGG + chr8_4:51188158-51188177 Msa1331600:intron 45.0%
! TGATTTGGCAAGCTGCGATT+TGG - chr8_4:51188172-51188191 Msa1331610:intron 45.0%
GATTTGGCAAGCTGCGATTT+GGG - chr8_4:51188173-51188192 Msa1331610:intron 45.0%
TGTAAGGTGGGAGGAATTAG+TGG - chr8_4:51188239-51188258 Msa1331610:intron 45.0%
AAGAGGTTAAGGTGATGTCG+TGG - chr8_4:51188262-51188281 Msa1331610:intron 45.0%
! TGCAAGCCGGAGTATTAAAG+CGG + chr8_4:51188302-51188321 Msa1331600:intron 45.0%
CATTCGTAGAACATGCAAGC+CGG + chr8_4:51188315-51188334 Msa1331600:intron 45.0%
GCATGTTCTACGAATGGAGT+TGG - chr8_4:51188319-51188338 Msa1331610:intron 45.0%
CTGCTGCTGTCTGTTTGTTT+GGG - chr8_4:51188372-51188391 Msa1331610:intron 45.0%
TGCTGCTGTCTGTTTGTTTG+GGG - chr8_4:51188373-51188392 Msa1331610:intron 45.0%
TTCTTCTTCTGTTCCTGCTG+CGG - chr8_4:51188430-51188449 Msa1331610:intron 45.0%
TCTGTTCTTCGGTTGACAGT+AGG - chr8_4:51188487-51188506 Msa1331610:intron 45.0%
CTGTTCTTCGGTTGACAGTA+GGG - chr8_4:51188488-51188507 Msa1331610:intron 45.0%
!!! TGCTGGAGGGTTTGTTTTGT+AGG - chr8_4:51188627-51188646 Msa1331610:intron 45.0%
!!! GGGTTTGTTTTGTAGGCAGT+TGG - chr8_4:51188634-51188653 Msa1331610:intron 45.0%
GGCTAATTGCGTTCAGTAGA+TGG - chr8_4:51188914-51188933 Msa1331610:intron 45.0%
GAACACTTACTATGAGACGG+AGG - chr8_4:51189022-51189041 Msa1331610:intron 45.0%
GGGAGTAGTAAGATGGTACA+TGG - chr8_4:51189043-51189062 Msa1331610:intron 45.0%
GAACCAGTCACTTCATACAC+AGG + chr8_4:51189151-51189170 Msa1331600:three_prime_UTR 45.0%
! GAAGTGACTGGTTCATCTGT+TGG - chr8_4:51189157-51189176 Msa1331610:CDS 45.0%
! AGTGACTGGTTCATCTGTTG+GGG - chr8_4:51189159-51189178 Msa1331610:CDS 45.0%
CTAACTCACATGCTTGTCTG+GGG - chr8_4:51189184-51189203 Msa1331610:CDS 45.0%
!! GAAGTCTGGTTTGGATTGGT+GGG + chr8_4:51187444-51187463 Msa1331600:intron 45.0%
!! TGAAGTCTGGTTTGGATTGG+TGG + chr8_4:51187445-51187464 Msa1331600:intron 45.0%
GGAGATGATGAAGTCTGGTT+TGG + chr8_4:51187453-51187472 Msa1331600:intron 45.0%
AAGAGGGAGATGATGAAGTC+TGG + chr8_4:51187458-51187477 Msa1331600:intron 45.0%
!! GTTCTTTTGAAGGGGAGGTA+GGG + chr8_4:51187509-51187528 Msa1331600:intron 45.0%
!! TGTTCTTTTGAAGGGGAGGT+AGG + chr8_4:51187510-51187529 Msa1331600:intron 45.0%
CCACATTCTTACCAATCCCT+CGG + chr8_4:51187704-51187723 Msa1331600:three_prime_UTR 45.0%
! GGAGCTGTTGCTATTAGACA+TGG - chr8_4:51187820-51187839 Msa1331610:CDS 45.0%
AAATCATCCGCAATCCCTTC+CGG + chr8_4:51188158-51188177 Msa1331600:intron 45.0%
! TGATTTGGCAAGCTGCGATT+TGG - chr8_4:51188172-51188191 Msa1331610:intron 45.0%
GATTTGGCAAGCTGCGATTT+GGG - chr8_4:51188173-51188192 Msa1331610:intron 45.0%
TGTAAGGTGGGAGGAATTAG+TGG - chr8_4:51188239-51188258 Msa1331610:intron 45.0%
AAGAGGTTAAGGTGATGTCG+TGG - chr8_4:51188262-51188281 Msa1331610:intron 45.0%
! TGCAAGCCGGAGTATTAAAG+CGG + chr8_4:51188302-51188321 Msa1331600:intron 45.0%
CATTCGTAGAACATGCAAGC+CGG + chr8_4:51188315-51188334 Msa1331600:intron 45.0%
GCATGTTCTACGAATGGAGT+TGG - chr8_4:51188319-51188338 Msa1331610:intron 45.0%
CTGCTGCTGTCTGTTTGTTT+GGG - chr8_4:51188372-51188391 Msa1331610:intron 45.0%
TGCTGCTGTCTGTTTGTTTG+GGG - chr8_4:51188373-51188392 Msa1331610:intron 45.0%
TTCTTCTTCTGTTCCTGCTG+CGG - chr8_4:51188430-51188449 Msa1331610:intron 45.0%
TCTGTTCTTCGGTTGACAGT+AGG - chr8_4:51188487-51188506 Msa1331610:intron 45.0%
CTGTTCTTCGGTTGACAGTA+GGG - chr8_4:51188488-51188507 Msa1331610:intron 45.0%
!!! TGCTGGAGGGTTTGTTTTGT+AGG - chr8_4:51188627-51188646 Msa1331610:intron 45.0%
!!! GGGTTTGTTTTGTAGGCAGT+TGG - chr8_4:51188634-51188653 Msa1331610:intron 45.0%
GGCTAATTGCGTTCAGTAGA+TGG - chr8_4:51188914-51188933 Msa1331610:intron 45.0%
GAACACTTACTATGAGACGG+AGG - chr8_4:51189022-51189041 Msa1331610:intron 45.0%
GGGAGTAGTAAGATGGTACA+TGG - chr8_4:51189043-51189062 Msa1331610:intron 45.0%
GAACCAGTCACTTCATACAC+AGG + chr8_4:51189151-51189170 Msa1331600:three_prime_UTR 45.0%
! GAAGTGACTGGTTCATCTGT+TGG - chr8_4:51189157-51189176 Msa1331610:CDS 45.0%
! AGTGACTGGTTCATCTGTTG+GGG - chr8_4:51189159-51189178 Msa1331610:CDS 45.0%
CTAACTCACATGCTTGTCTG+GGG - chr8_4:51189184-51189203 Msa1331610:CDS 45.0%
!!! CTTTTATTATAATTTTAAAA+TGG - chr8_4:51188871-51188890 Msa1331610:intron 5.0%
!!! CTTTTATTATAATTTTAAAA+TGG - chr8_4:51188871-51188890 Msa1331610:intron 5.0%
!! TCTGGTTTGGATTGGTGGGT+TGG + chr8_4:51187440-51187459 Msa1331600:intron 50.0%
GACCTTCAGCTCCAAACTCT+AGG - chr8_4:51187622-51187641 Msa1331610:intron 50.0%
! GTCCTAGAGTTTGGAGCTGA+AGG + chr8_4:51187627-51187646 Msa1331600:intron 50.0%
CAGAATCACAGCAAGGAGCT+TGG - chr8_4:51187654-51187673 Msa1331610:intron 50.0%
TAACGAGCTTGGAAAAGCCG+AGG - chr8_4:51187684-51187703 Msa1331610:CDS 50.0%
AACGAGCTTGGAAAAGCCGA+GGG - chr8_4:51187685-51187704 Msa1331610:CDS 50.0%
! CCGAGGGATTGGTAAGAATG+TGG - chr8_4:51187701-51187720 Msa1331610:CDS 50.0%
TGTCCATTGGGAATGTTGGG+TGG - chr8_4:51188110-51188129 Msa1331610:intron 50.0%
GTCCATTGGGAATGTTGGGT+GGG - chr8_4:51188111-51188130 Msa1331610:intron 50.0%
AGAAAGTCCGGAAGGGATTG+CGG - chr8_4:51188148-51188167 Msa1331610:intron 50.0%
GGAAGGGATTGCGGATGATT+TGG - chr8_4:51188157-51188176 Msa1331610:intron 50.0%
GTGGGAGGAATTAGTGGAAG+AGG - chr8_4:51188245-51188264 Msa1331610:intron 50.0%
AGGTTAAGGTGATGTCGTGG+AGG - chr8_4:51188265-51188284 Msa1331610:intron 50.0%
TTAAGGTGATGTCGTGGAGG+TGG - chr8_4:51188268-51188287 Msa1331610:intron 50.0%
CGGCTTGCATGTTCTACGAA+TGG - chr8_4:51188313-51188332 Msa1331610:intron 50.0%
GCTGCTGCTGTCTGTTTGTT+TGG - chr8_4:51188371-51188390 Msa1331610:intron 50.0%
! GTTTGGGGTAGAATTGCAGC+TGG - chr8_4:51188388-51188407 Msa1331610:intron 50.0%
TCTGGTTAGGCTACTGTTGC+TGG - chr8_4:51188565-51188584 Msa1331610:intron 50.0%
ACAGCCACCGCTGGAAAAAA+AGG + chr8_4:51188608-51188627 Msa1331600:intron 50.0%
TTGTAGGCAGTTGGGGGTTT+AGG - chr8_4:51188643-51188662 Msa1331610:intron 50.0%
!! ACAAGAGTGCCCACGATCAA+AGG + chr8_4:51188765-51188784 Msa1331600:intron 50.0%
AAGACGCACTAAACCCGCTA+AGG + chr8_4:51188800-51188819 Msa1331600:intron 50.0%
AGACGGAGGGAGTAGTAAGA+TGG - chr8_4:51189036-51189055 Msa1331610:intron 50.0%
AAAGTGTGATCTGCTGCCTC+AGG - chr8_4:51189512-51189531 Msa1331610:CDS 50.0%
CGGTATTTCACGTACACCTG+AGG + chr8_4:51189531-51189550 Msa1331600:three_prime_UTR 50.0%
!! TCTGGTTTGGATTGGTGGGT+TGG + chr8_4:51187440-51187459 Msa1331600:intron 50.0%
GACCTTCAGCTCCAAACTCT+AGG - chr8_4:51187622-51187641 Msa1331610:intron 50.0%
! GTCCTAGAGTTTGGAGCTGA+AGG + chr8_4:51187627-51187646 Msa1331600:intron 50.0%
CAGAATCACAGCAAGGAGCT+TGG - chr8_4:51187654-51187673 Msa1331610:intron 50.0%
TAACGAGCTTGGAAAAGCCG+AGG - chr8_4:51187684-51187703 Msa1331610:CDS 50.0%
AACGAGCTTGGAAAAGCCGA+GGG - chr8_4:51187685-51187704 Msa1331610:CDS 50.0%
! CCGAGGGATTGGTAAGAATG+TGG - chr8_4:51187701-51187720 Msa1331610:CDS 50.0%
TGTCCATTGGGAATGTTGGG+TGG - chr8_4:51188110-51188129 Msa1331610:intron 50.0%
GTCCATTGGGAATGTTGGGT+GGG - chr8_4:51188111-51188130 Msa1331610:intron 50.0%
AGAAAGTCCGGAAGGGATTG+CGG - chr8_4:51188148-51188167 Msa1331610:intron 50.0%
GGAAGGGATTGCGGATGATT+TGG - chr8_4:51188157-51188176 Msa1331610:intron 50.0%
GTGGGAGGAATTAGTGGAAG+AGG - chr8_4:51188245-51188264 Msa1331610:intron 50.0%
AGGTTAAGGTGATGTCGTGG+AGG - chr8_4:51188265-51188284 Msa1331610:intron 50.0%
TTAAGGTGATGTCGTGGAGG+TGG - chr8_4:51188268-51188287 Msa1331610:intron 50.0%
CGGCTTGCATGTTCTACGAA+TGG - chr8_4:51188313-51188332 Msa1331610:intron 50.0%
GCTGCTGCTGTCTGTTTGTT+TGG - chr8_4:51188371-51188390 Msa1331610:intron 50.0%
! GTTTGGGGTAGAATTGCAGC+TGG - chr8_4:51188388-51188407 Msa1331610:intron 50.0%
TCTGGTTAGGCTACTGTTGC+TGG - chr8_4:51188565-51188584 Msa1331610:intron 50.0%
ACAGCCACCGCTGGAAAAAA+AGG + chr8_4:51188608-51188627 Msa1331600:intron 50.0%
TTGTAGGCAGTTGGGGGTTT+AGG - chr8_4:51188643-51188662 Msa1331610:intron 50.0%
!! ACAAGAGTGCCCACGATCAA+AGG + chr8_4:51188765-51188784 Msa1331600:intron 50.0%
AAGACGCACTAAACCCGCTA+AGG + chr8_4:51188800-51188819 Msa1331600:intron 50.0%
AGACGGAGGGAGTAGTAAGA+TGG - chr8_4:51189036-51189055 Msa1331610:intron 50.0%
AAAGTGTGATCTGCTGCCTC+AGG - chr8_4:51189512-51189531 Msa1331610:CDS 50.0%
CGGTATTTCACGTACACCTG+AGG + chr8_4:51189531-51189550 Msa1331600:three_prime_UTR 50.0%
AAGGGGAGGTAGGGAGAGAT+GGG + chr8_4:51187500-51187519 Msa1331600:intron 55.0%
GCTTGGAAAAGCCGAGGGAT+TGG - chr8_4:51187690-51187709 Msa1331610:CDS 55.0%
CTCCCACCCAACATTCCCAA+TGG + chr8_4:51188116-51188135 Msa1331600:intron 55.0%
CATTGGGAATGTTGGGTGGG+AGG - chr8_4:51188114-51188133 Msa1331610:intron 55.0%
CAAAGCGGTTGTAAGGTGGG+AGG - chr8_4:51188230-51188249 Msa1331610:intron 55.0%
GGGTAGAATTGCAGCTGGTG+CGG - chr8_4:51188393-51188412 Msa1331610:intron 55.0%
CTTCTGTTCCTGCTGCGGTT+CGG - chr8_4:51188435-51188454 Msa1331610:intron 55.0%
TTCTGTTCCTGCTGCGGTTC+GGG - chr8_4:51188436-51188455 Msa1331610:intron 55.0%
ACTTAAACCCGAACCGCAGC+AGG + chr8_4:51188446-51188465 Msa1331600:intron 55.0%
ACGCACTAAACCCGCTAAGG+AGG + chr8_4:51188797-51188816 Msa1331600:intron 55.0%
ACTCACATGCTTGTCTGGGG+AGG - chr8_4:51189187-51189206 Msa1331610:CDS 55.0%
! ATGCTTGTCTGGGGAGGTGT+TGG - chr8_4:51189193-51189212 Msa1331610:CDS 55.0%
AAGGGGAGGTAGGGAGAGAT+GGG + chr8_4:51187500-51187519 Msa1331600:intron 55.0%
GCTTGGAAAAGCCGAGGGAT+TGG - chr8_4:51187690-51187709 Msa1331610:CDS 55.0%
CTCCCACCCAACATTCCCAA+TGG + chr8_4:51188116-51188135 Msa1331600:intron 55.0%
CATTGGGAATGTTGGGTGGG+AGG - chr8_4:51188114-51188133 Msa1331610:intron 55.0%
CAAAGCGGTTGTAAGGTGGG+AGG - chr8_4:51188230-51188249 Msa1331610:intron 55.0%
GGGTAGAATTGCAGCTGGTG+CGG - chr8_4:51188393-51188412 Msa1331610:intron 55.0%
CTTCTGTTCCTGCTGCGGTT+CGG - chr8_4:51188435-51188454 Msa1331610:intron 55.0%
TTCTGTTCCTGCTGCGGTTC+GGG - chr8_4:51188436-51188455 Msa1331610:intron 55.0%
ACTTAAACCCGAACCGCAGC+AGG + chr8_4:51188446-51188465 Msa1331600:intron 55.0%
ACGCACTAAACCCGCTAAGG+AGG + chr8_4:51188797-51188816 Msa1331600:intron 55.0%
ACTCACATGCTTGTCTGGGG+AGG - chr8_4:51189187-51189206 Msa1331610:CDS 55.0%
! ATGCTTGTCTGGGGAGGTGT+TGG - chr8_4:51189193-51189212 Msa1331610:CDS 55.0%
GGTAGGGAGAGATGGGAGGT+TGG + chr8_4:51187493-51187512 Msa1331600:intron 60.0%
GAAGGGGAGGTAGGGAGAGA+TGG + chr8_4:51187501-51187520 Msa1331600:intron 60.0%
!! CGAATGGAGTTGGTGTCCCG+TGG - chr8_4:51188329-51188348 Msa1331610:intron 60.0%
AGCTGGTGCGGTTTCCCTAC+TGG - chr8_4:51188405-51188424 Msa1331610:intron 60.0%
! TTTTCCAGCGGTGGCTGTGC+TGG - chr8_4:51188610-51188629 Msa1331610:intron 60.0%
!! GGGAGGTGTTGGTACTCGCA+TGG - chr8_4:51189204-51189223 Msa1331610:CDS 60.0%
GGTAGGGAGAGATGGGAGGT+TGG + chr8_4:51187493-51187512 Msa1331600:intron 60.0%
GAAGGGGAGGTAGGGAGAGA+TGG + chr8_4:51187501-51187520 Msa1331600:intron 60.0%
!! CGAATGGAGTTGGTGTCCCG+TGG - chr8_4:51188329-51188348 Msa1331610:intron 60.0%
AGCTGGTGCGGTTTCCCTAC+TGG - chr8_4:51188405-51188424 Msa1331610:intron 60.0%
! TTTTCCAGCGGTGGCTGTGC+TGG - chr8_4:51188610-51188629 Msa1331610:intron 60.0%
!! GGGAGGTGTTGGTACTCGCA+TGG - chr8_4:51189204-51189223 Msa1331610:CDS 60.0%
GGGAGGTAGGGAGAGATGGG+AGG + chr8_4:51187497-51187516 Msa1331600:intron 65.0%
GGGAGGTAGGGAGAGATGGG+AGG + chr8_4:51187497-51187516 Msa1331600:intron 65.0%
TCCAGCGGTGGCTGTGCTGG+AGG - chr8_4:51188613-51188632 Msa1331610:intron 70.0%
CCAGCGGTGGCTGTGCTGGA+GGG - chr8_4:51188614-51188633 Msa1331610:intron 70.0%
TCCAGCGGTGGCTGTGCTGG+AGG - chr8_4:51188613-51188632 Msa1331610:intron 70.0%
CCAGCGGTGGCTGTGCTGGA+GGG - chr8_4:51188614-51188633 Msa1331610:intron 70.0%
CCCTCCAGCACAGCCACCGC+TGG + chr8_4:51188617-51188636 Msa1331600:intron 75.0%
CCCTCCAGCACAGCCACCGC+TGG + chr8_4:51188617-51188636 Msa1331600:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 51187406 51189556 51187406 ID=Msa1331610;Name=Msa1331610
chr8_4 mRNA 51187406 51189556 51187406 ID=Msa1331610-mRNA-1;Parent=Msa1331610;Name=Msa1331610-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|230
chr8_4 exon 51189053 51189556 51189053 ID=Msa1331610-mRNA-1:exon:15073;Parent=Msa1331610-mRNA-1
chr8_4 exon 51187682 51187847 51187682 ID=Msa1331610-mRNA-1:exon:15072;Parent=Msa1331610-mRNA-1
chr8_4 exon 51187406 51187428 51187406 ID=Msa1331610-mRNA-1:exon:15071;Parent=Msa1331610-mRNA-1
chr8_4 CDS 51189053 51189556 51189053 ID=Msa1331610-mRNA-1:cds;Parent=Msa1331610-mRNA-1
chr8_4 CDS 51187682 51187847 51187682 ID=Msa1331610-mRNA-1:cds;Parent=Msa1331610-mRNA-1
chr8_4 CDS 51187406 51187428 51187406 ID=Msa1331610-mRNA-1:cds;Parent=Msa1331610-mRNA-1
Gene Sequence

>Msa1331610

ATGAAGCTAAGCCAGAACCTTAATTTACAAACCAACCCACCAATCCAAACCAGACTTCATCATCTCCCTCTTTCACCAAATATTCCAACCTCCCATCTCTCCCTACCTCCCCTTCAAAAGAACAGATTCAAATGCATTACTGTAAAAGCTACCAACGAATCAATTTCATTGCCAACCATGTCCGAAATACTAGAATCATCAAGAGGACAAAAACTCGACCTTCAGCTCCAAACTCTAGGACCCTTTTTCAGAATCACAGCAAGGAGCTTGGTAACAGATAACGAGCTTGGAAAAGCCGAGGGATTGGTAAGAATGTGGTTTGGAAGAGGTAATATTCTTCACTTGGATTCTATCAAACTACAAAGAGAAACACTTGGAATGGAGAAATCAATATTTGGAATTGGTTTGTATATTGGAGCTGTTGCTATTAGACATGGATATGATTGTGGTTGTAAATCAGCTCAGTTACTTGCTATCAATGATTCTGATCTTTACCATTCTAAGTTGATTAGGTTCTACACAAGACTTGGGTTTAAACCTGTGTATGAAGTGACTGGTTCATCTGTTGGGGATCTAACTCACATGCTTGTCTGGGGAGGTGTTGGTACTCGCATGGATGCCAGTGTTGAAGAACTTATGATAAAATGGTGTAAAAGATTTAAAAAAACAAGTGTACGTGAAATACCGAAGTAG

Protein sequence

>Msa1331610

MKLSQNLNLQTNPPIQTRLHHLPLSPNIPTSHLSLPPLQKNRFKCITVKATNESISLPTMSEILESSRGQKLDLQLQTLGPFFRITARSLVTDNELGKAEGLVRMWFGRGNILHLDSIKLQRETLGMEKSIFGIGLYIGAVAIRHGYDCGCKSAQLLAINDSDLYHSKLIRFYTRLGFKPVYEVTGSSVGDLTHMLVWGGVGTRMDASVEELMIKWCKRFKKTSVREIPK*