AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1258200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258200 MtrunA17_Chr4g0057081 96.238 319 12 0 1 319 51 369 0.0 633
Msa1258200 MtrunA17_Chr5g0398281 78.671 286 56 3 36 319 29 311 3.90e-165 462
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258200 AT4G22890.1 74.691 324 69 5 4 319 2 320 1.33e-167 469
Msa1258200 AT4G22890.3 74.691 324 69 5 4 319 2 320 1.33e-167 469
Msa1258200 AT4G22890.4 74.383 324 67 5 4 319 2 317 8.37e-167 467
Msa1258200 AT4G22890.5 74.074 324 69 5 4 319 2 318 7.42e-166 464
Msa1258200 AT4G11960.1 75.478 314 71 4 7 319 1 309 5.32e-163 457
Msa1258200 AT4G11960.2 84.127 252 39 1 68 319 42 292 1.30e-156 440
Msa1258200 AT4G22890.2 74.098 305 66 5 4 300 2 301 5.45e-154 433
Msa1258200 AT5G59400.1 29.474 190 102 7 139 302 75 258 1.35e-11 64.7

Find 77 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCTTTGTCGCTCAAAAT+TGG 0.191899 8_2:-59369941 None:intergenic
AAAATTTCTTGAAGCTTCTA+TGG 0.224918 8_2:+59369901 Msa1258200:CDS
ACTGAAAATACCTCCTTCTT+TGG 0.249747 8_2:+59372508 Msa1258200:CDS
TTCTTCCTTGATGATATAAC+TGG 0.283720 8_2:+59371844 Msa1258200:CDS
GCTTCTATGGCTTATGTATC+TGG 0.293115 8_2:+59369914 Msa1258200:CDS
CATTGCTTGAACAATGAATA+TGG 0.301898 8_2:-59373051 None:intergenic
AATCACAAAATCTTTGATAA+TGG 0.309190 8_2:-59372385 None:intergenic
CCAGCCACTGTGGTTGCATT+AGG 0.325068 8_2:+59371035 Msa1258200:CDS
ACTTATGCATTACTTCATTC+TGG 0.341550 8_2:-59372789 None:intergenic
TTAACAGTCATTCTATTATG+AGG 0.366346 8_2:+59369626 Msa1258200:intron
CAAGTGAAAATGAAACTAAA+AGG 0.380242 8_2:-59372312 None:intergenic
TGTTGATCTGCAGTGGCTTT+AGG 0.383078 8_2:-59369147 None:intergenic
AGAGCATTTGACTTTGTTGT+TGG 0.383266 8_2:-59372560 None:intergenic
CTGAAAATACCTCCTTCTTT+GGG 0.406319 8_2:+59372509 Msa1258200:CDS
TTTGATCTATGCTACAATAT+GGG 0.409201 8_2:-59369298 None:intergenic
CCTAATGCAACCACAGTGGC+TGG 0.425616 8_2:-59371035 None:intergenic
TTCAGTTCCGCAGTTTGGAC+AGG 0.427658 8_2:-59372491 None:intergenic
TGAACAATGAATATGGTTCC+AGG 0.436505 8_2:-59373044 None:intergenic
TGTATGCATACAGGTATTCC+TGG 0.436776 8_2:+59373026 Msa1258200:intron
CAGTGGCTGGGACGTTCAGC+AGG 0.463026 8_2:-59371022 None:intergenic
TGTTAAAGTGAAGGCTACTT+TGG 0.472750 8_2:-59369004 None:intergenic
TAAGTTGAAACTGAATCTAA+AGG 0.474896 8_2:+59369967 Msa1258200:CDS
TAACAGTCATTCTATTATGA+GGG 0.484496 8_2:+59369627 Msa1258200:intron
GGGAGTGAAATTGTTGTTGA+GGG 0.502581 8_2:+59370543 Msa1258200:CDS
GCGGCGAAGGCATACGTGGC+GGG 0.515692 8_2:-59369106 None:intergenic
TGGGGTGCAGAACATGGACG+AGG 0.521093 8_2:-59369030 None:intergenic
AACCAGCTGTGGAACTGAAA+TGG 0.521644 8_2:+59372734 Msa1258200:intron
GGGGTTTGGGGTGCAGAACA+TGG 0.525560 8_2:-59369036 None:intergenic
CAGTTAACATGGTGAATGGT+GGG 0.526877 8_2:-59368978 None:intergenic
GTCATTCTATTATGAGGGAA+AGG 0.537540 8_2:+59369632 Msa1258200:intron
CAGTGGCTTTAGGCGAAAGT+AGG 0.539506 8_2:-59369137 None:intergenic
CAAATCCAGTTATATCATCA+AGG 0.541384 8_2:-59371849 None:intergenic
AGAATGAAGTAATGCATAAG+TGG 0.541654 8_2:+59372791 Msa1258200:exon
ATCTCAAGGAGGAACTTATG+TGG 0.560599 8_2:+59369682 Msa1258200:CDS
TTCTTGCTCAAGTTCACCAA+CGG 0.563076 8_2:-59369336 None:intergenic
AAAATGAAACTAAAAGGCTC+CGG 0.563124 8_2:-59372306 None:intergenic
TCAGTTCCGCAGTTTGGACA+GGG 0.564708 8_2:-59372490 None:intergenic
TGAGATCACTTATTTGCTAG+AGG 0.565242 8_2:+59371870 Msa1258200:CDS
GTAGGAGTAATCTGCGGCGA+AGG 0.572243 8_2:-59369119 None:intergenic
TGACAGTATAGTCCCAAAGA+AGG 0.573955 8_2:-59372521 None:intergenic
AGGGAGTGAAATTGTTGTTG+AGG 0.575033 8_2:+59370542 Msa1258200:CDS
GCAGTTAACATGGTGAATGG+TGG 0.579299 8_2:-59368979 None:intergenic
ATCTAGCTCTATCACTAACA+AGG 0.579354 8_2:+59372361 Msa1258200:CDS
CTAATGCAACCACAGTGGCT+GGG 0.581180 8_2:-59371034 None:intergenic
GTAGCAGTTAACATGGTGAA+TGG 0.581674 8_2:-59368982 None:intergenic
TCTCAAGGAGGAACTTATGT+GGG 0.582901 8_2:+59369683 Msa1258200:CDS
TGAAGAATTTGATAATCTCA+AGG 0.586912 8_2:+59369668 Msa1258200:CDS
AAGACCTTGTTGATCTGCAG+TGG 0.588296 8_2:-59369154 None:intergenic
AACTGAAATGGTGTATGACT+CGG 0.590231 8_2:+59372746 Msa1258200:CDS
TTACTTCGAAGGCTGCACCT+TGG 0.594902 8_2:-59370567 None:intergenic
TCTAGCTCTATCACTAACAA+GGG 0.599765 8_2:+59372362 Msa1258200:CDS
ATCTGCGGCGAAGGCATACG+TGG 0.603458 8_2:-59369110 None:intergenic
ATACTGTCAATTTCAAGTGG+TGG 0.605247 8_2:+59372535 Msa1258200:CDS
TACTTTGGTAGCAGTTAACA+TGG 0.605577 8_2:-59368989 None:intergenic
AAATTGTTGTTGAGGGTCCA+AGG 0.606961 8_2:+59370550 Msa1258200:CDS
GGGGTGCAGAACATGGACGA+GGG 0.613308 8_2:-59369029 None:intergenic
AAGGAGGAACTTATGTGGGA+AGG 0.615460 8_2:+59369687 Msa1258200:CDS
TAGAGCTAGATATACAATGA+GGG 0.616671 8_2:-59372349 None:intergenic
GGGTGCAGAACATGGACGAG+GGG 0.619198 8_2:-59369028 None:intergenic
AAAAGATAATGGAATGAAGG+GGG 0.624641 8_2:-59369055 None:intergenic
TCTTTAAATAGTCAACAGAC+AGG 0.629626 8_2:-59370995 None:intergenic
ACTGAAATGGTGTATGACTC+GGG 0.632804 8_2:+59372747 Msa1258200:CDS
GATCTATGCTACAATATGGG+AGG 0.633005 8_2:-59369295 None:intergenic
ACTATACTGTCAATTTCAAG+TGG 0.637003 8_2:+59372532 Msa1258200:CDS
CAGTATAGTCCCAAAGAAGG+AGG 0.645974 8_2:-59372518 None:intergenic
ATAGAGCTAGATATACAATG+AGG 0.647386 8_2:-59372350 None:intergenic
GGTGCAGAACATGGACGAGG+GGG 0.647901 8_2:-59369027 None:intergenic
ATGAAGTAATGCATAAGTGG+AGG 0.648651 8_2:+59372794 Msa1258200:exon
AGAGCTAGATATACAATGAG+GGG 0.654956 8_2:-59372348 None:intergenic
TGCGGCGAAGGCATACGTGG+CGG 0.660060 8_2:-59369107 None:intergenic
AAAGCCACTGCAGATCAACA+AGG 0.674513 8_2:+59369150 Msa1258200:CDS
AAGGGTCCCTGTCCAAACTG+CGG 0.678881 8_2:+59372484 Msa1258200:intron
ACGTGGCGGGAATTGAAGTG+AGG 0.698520 8_2:-59369093 None:intergenic
GCTGAACGTCCCAGCCACTG+TGG 0.709181 8_2:+59371025 Msa1258200:CDS
AGAATTTGATAATCTCAAGG+AGG 0.725675 8_2:+59369671 Msa1258200:CDS
CAATCCTAATGCAACCACAG+TGG 0.746857 8_2:-59371039 None:intergenic
GCGAAAGTAGGAGTAATCTG+CGG 0.775526 8_2:-59369125 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGAAACAAAATTTATTTTT+CGG + chr8_2:59370145-59370164 Msa1258200:intron 10.0%
!!! TGTTTTTCTTTTTTAAATTA+CGG + chr8_2:59370244-59370263 Msa1258200:intron 10.0%
!!! TAGATTTCATTTTTAAATTA+CGG - chr8_2:59370373-59370392 None:intergenic 10.0%
!!! AATATCTTTTTCATTATAAT+TGG - chr8_2:59372232-59372251 None:intergenic 10.0%
!!! CTGATTATTTAAATTTTAAA+AGG + chr8_2:59372465-59372484 Msa1258200:intron 10.0%
!! ATAAGTAAATAAGTAAAATG+CGG - chr8_2:59369215-59369234 None:intergenic 15.0%
!! AAGAAAATAAGAAACAAATT+TGG - chr8_2:59369392-59369411 None:intergenic 15.0%
!!! TGAAACAAAATTTATTTTTC+GGG + chr8_2:59370146-59370165 Msa1258200:intron 15.0%
!! TAAATGATAAAACATATGTA+GGG - chr8_2:59371085-59371104 None:intergenic 15.0%
!! ATAAATGATAAAACATATGT+AGG - chr8_2:59371086-59371105 None:intergenic 15.0%
!! TATTATAAAATATGATTCAC+TGG - chr8_2:59372154-59372173 None:intergenic 15.0%
!!! TATAACAGATATTGATATTT+TGG + chr8_2:59372266-59372285 Msa1258200:intron 15.0%
!!! TGCTTAAACTAATTTAATTT+AGG + chr8_2:59372645-59372664 Msa1258200:intron 15.0%
!!! GCTTAAACTAATTTAATTTA+GGG + chr8_2:59372646-59372665 Msa1258200:intron 15.0%
!! ATGTTATACCATAAATTAAA+GGG - chr8_2:59372687-59372706 None:intergenic 15.0%
!!! TTACTTATCATTTTTCTTTC+AGG + chr8_2:59369227-59369246 Msa1258200:intron 20.0%
!!! TACTTATCATTTTTCTTTCA+GGG + chr8_2:59369228-59369247 Msa1258200:intron 20.0%
!! AAATAAGAAACAAATTTGGT+GGG - chr8_2:59369388-59369407 None:intergenic 20.0%
!! AAAATAAGAAACAAATTTGG+TGG - chr8_2:59369389-59369408 None:intergenic 20.0%
!!! TTATTTTCGTATAATCTGTT+TGG + chr8_2:59369444-59369463 Msa1258200:intron 20.0%
!! ATATCTTAAACTTCCTAAAA+TGG - chr8_2:59370174-59370193 None:intergenic 20.0%
!!! TTAGGAAGTTTAAGATATTA+AGG + chr8_2:59370176-59370195 Msa1258200:intron 20.0%
!!! TAGGAAGTTTAAGATATTAA+GGG + chr8_2:59370177-59370196 Msa1258200:intron 20.0%
!!! ATTTGTTTAGATTTGAGATT+GGG + chr8_2:59370744-59370763 Msa1258200:intron 20.0%
!!! ACTTATTACAGTCTTTTTAT+AGG + chr8_2:59370962-59370981 Msa1258200:intron 20.0%
!!! TTGACTTTGTTGATTTATAA+TGG + chr8_2:59371107-59371126 Msa1258200:intron 20.0%
!! TGTTATATGATCATATATCA+TGG - chr8_2:59371459-59371478 None:intergenic 20.0%
!! ATGGAGATTATAAAATATGT+AGG - chr8_2:59371684-59371703 None:intergenic 20.0%
!! AATAATAAGTTTGCAATTCT+AGG - chr8_2:59371917-59371936 None:intergenic 20.0%
!! AGAATTGCAAACTTATTATT+TGG + chr8_2:59371917-59371936 Msa1258200:intron 20.0%
!! GAATTGCAAACTTATTATTT+GGG + chr8_2:59371918-59371937 Msa1258200:intron 20.0%
!! AATAAAATGTTAGAAAGGAA+AGG - chr8_2:59371998-59372017 None:intergenic 20.0%
!!! TTTATTGCCTTTTAAATCTA+TGG + chr8_2:59372012-59372031 Msa1258200:intron 20.0%
!! AATCACAAAATCTTTGATAA+TGG - chr8_2:59372388-59372407 None:intergenic 20.0%
!!! CAAAGATTTTGTGATTTTAA+AGG + chr8_2:59372392-59372411 Msa1258200:CDS 20.0%
!! GATGTTATACCATAAATTAA+AGG - chr8_2:59372688-59372707 None:intergenic 20.0%
!! TGTTACCTTGAAAAATATAA+TGG + chr8_2:59372953-59372972 Msa1258200:intron 20.0%
!!! AGTAGTGGTTTTGTTTAATT+TGG - chr8_2:59368935-59368954 None:intergenic 25.0%
!!! AAAAAGATAATGGAATGAAG+GGG - chr8_2:59369059-59369078 None:intergenic 25.0%
!!! GAAAAAGATAATGGAATGAA+GGG - chr8_2:59369060-59369079 None:intergenic 25.0%
!!! AGAAAAAGATAATGGAATGA+AGG - chr8_2:59369061-59369080 None:intergenic 25.0%
! GAAACAGAAGAAAAAGATAA+TGG - chr8_2:59369069-59369088 None:intergenic 25.0%
! GTGTAGTTAGAAAATGAAAA+AGG - chr8_2:59369190-59369209 None:intergenic 25.0%
! TTTGATCTATGCTACAATAT+GGG - chr8_2:59369301-59369320 None:intergenic 25.0%
!! TTTTGATCTATGCTACAATA+TGG - chr8_2:59369302-59369321 None:intergenic 25.0%
! TTGTAGCATAGATCAAAAAA+AGG + chr8_2:59369304-59369323 Msa1258200:CDS 25.0%
! TTAACAGTCATTCTATTATG+AGG + chr8_2:59369626-59369645 Msa1258200:intron 25.0%
! TAACAGTCATTCTATTATGA+GGG + chr8_2:59369627-59369646 Msa1258200:intron 25.0%
!! TGAAGAATTTGATAATCTCA+AGG + chr8_2:59369668-59369687 Msa1258200:CDS 25.0%
! AAAATTTCTTGAAGCTTCTA+TGG + chr8_2:59369901-59369920 Msa1258200:CDS 25.0%
!! TAAGTTGAAACTGAATCTAA+AGG + chr8_2:59369967-59369986 Msa1258200:CDS 25.0%
! AGATGTAGTACTATATCATT+TGG + chr8_2:59370084-59370103 Msa1258200:intron 25.0%
! TATCATTTGGACCAAATTAA+AGG + chr8_2:59370097-59370116 Msa1258200:intron 25.0%
! AGTTGATCTAACCTTTAATT+TGG - chr8_2:59370111-59370130 None:intergenic 25.0%
! AAATTAAAGGTTAGATCAAC+TGG + chr8_2:59370110-59370129 Msa1258200:intron 25.0%
! ACAAATAGAACTGATACTTA+GGG - chr8_2:59370415-59370434 None:intergenic 25.0%
! AACAAATAGAACTGATACTT+AGG - chr8_2:59370416-59370435 None:intergenic 25.0%
!!! ATCAGTTCTATTTGTTATAC+TGG + chr8_2:59370420-59370439 Msa1258200:intron 25.0%
!!! CTATTCTCTTATTTCAGTTT+TGG + chr8_2:59370613-59370632 Msa1258200:intron 25.0%
!! GATTTGTTTAGATTTGAGAT+TGG + chr8_2:59370743-59370762 Msa1258200:intron 25.0%
!!! GCATTTTATTTGACATGAAA+TGG - chr8_2:59370841-59370860 None:intergenic 25.0%
!! AGAATTTTACCCTATCATTT+GGG + chr8_2:59370887-59370906 Msa1258200:intron 25.0%
!! GTAGGAATCAAAATTTTTAC+TGG - chr8_2:59371178-59371197 None:intergenic 25.0%
! GAAAGTGAAAATACAACATA+TGG + chr8_2:59371224-59371243 Msa1258200:intron 25.0%
! CTCAGAATCAAATATATGAA+TGG - chr8_2:59371309-59371328 None:intergenic 25.0%
! CATTCATATATTTGATTCTG+AGG + chr8_2:59371307-59371326 Msa1258200:intron 25.0%
! ATTATAAAATATGTAGGAGC+TGG - chr8_2:59371678-59371697 None:intergenic 25.0%
! ACAAAAAGTGGATACTAATA+TGG - chr8_2:59371703-59371722 None:intergenic 25.0%
! ATCCATCTTTCTTAAATCAA+AGG + chr8_2:59371724-59371743 Msa1258200:intron 25.0%
!! AACCTTTGATTTAAGAAAGA+TGG - chr8_2:59371729-59371748 None:intergenic 25.0%
!!! TGAAAGTACATTTTTGCTTT+AGG + chr8_2:59371766-59371785 Msa1258200:intron 25.0%
! AAGGCAATAAAATGTTAGAA+AGG - chr8_2:59372003-59372022 None:intergenic 25.0%
! ACTGTTTCCATAGATTTAAA+AGG - chr8_2:59372022-59372041 None:intergenic 25.0%
! AGAAGATATAAAAACTCCAA+TGG - chr8_2:59372051-59372070 None:intergenic 25.0%
!!! GTTTTTTTTCCATCATCAAA+TGG - chr8_2:59372132-59372151 None:intergenic 25.0%
! CAAGTGAAAATGAAACTAAA+AGG - chr8_2:59372315-59372334 None:intergenic 25.0%
!!! CTTTTAGTTTCATTTTCACT+TGG + chr8_2:59372313-59372332 Msa1258200:CDS 25.0%
!! TGCTGACTAATTAACTATTA+TGG + chr8_2:59372601-59372620 Msa1258200:intron 25.0%
! TTATACCATAAATTAAAGGG+TGG - chr8_2:59372684-59372703 None:intergenic 25.0%
! CATATATGCTTCAATAGATA+TGG - chr8_2:59372849-59372868 None:intergenic 25.0%
!! CGATACCATTATATTTTTCA+AGG - chr8_2:59372961-59372980 None:intergenic 25.0%
! CACTACTCTCAAATTTTTCT+CGG + chr8_2:59368948-59368967 Msa1258200:five_prime_UTR 30.0%
!! AAAAGATAATGGAATGAAGG+GGG - chr8_2:59369058-59369077 None:intergenic 30.0%
AGTAAATAAGTAAAATGCGG+AGG - chr8_2:59369212-59369231 None:intergenic 30.0%
! AATTTGGTGGGATATATACT+TGG - chr8_2:59369376-59369395 None:intergenic 30.0%
TTATCCAAAGAGAGACTTAA+TGG - chr8_2:59369415-59369434 None:intergenic 30.0%
! ATACTGTTCAACACAACTTT+TGG + chr8_2:59369564-59369583 Msa1258200:intron 30.0%
GATATCTGGACTAAAATTTG+TGG + chr8_2:59369586-59369605 Msa1258200:intron 30.0%
! AGAATTTGATAATCTCAAGG+AGG + chr8_2:59369671-59369690 Msa1258200:CDS 30.0%
TTGTTGAATTACTGTTGTGT+AGG + chr8_2:59369866-59369885 Msa1258200:intron 30.0%
! ATTGTGTCACTGGTAATTAA+AGG + chr8_2:59370056-59370075 Msa1258200:intron 30.0%
!!! TATTTTTCGGGTTCCATTTT+AGG + chr8_2:59370158-59370177 Msa1258200:intron 30.0%
! TAAGATATTAAGGGTGTGTT+TGG + chr8_2:59370186-59370205 Msa1258200:intron 30.0%
!!! CACTTACTTTTTTACTTCGA+AGG - chr8_2:59370581-59370600 None:intergenic 30.0%
GTCATATGACTGATATTAGT+AGG - chr8_2:59370776-59370795 None:intergenic 30.0%
CAAGTAGTGACAAGAAATAT+AGG + chr8_2:59370811-59370830 Msa1258200:intron 30.0%
ATGATAGGGTAAAATTCTGA+AGG - chr8_2:59370885-59370904 None:intergenic 30.0%
! CAGAATTTTACCCTATCATT+TGG + chr8_2:59370886-59370905 Msa1258200:intron 30.0%
TCTTTAAATAGTCAACAGAC+AGG - chr8_2:59370998-59371017 None:intergenic 30.0%
TAAAACATATGTAGGGAAAC+AGG - chr8_2:59371078-59371097 None:intergenic 30.0%
AGTAGAATGTTGACATCAAA+TGG - chr8_2:59371149-59371168 None:intergenic 30.0%
ATCATATATTTGGCAGAAGT+AGG - chr8_2:59371196-59371215 None:intergenic 30.0%
ACTTCTGCCAAATATATGAT+TGG + chr8_2:59371196-59371215 Msa1258200:intron 30.0%
! TCTGAGACCAATCATATATT+TGG - chr8_2:59371206-59371225 None:intergenic 30.0%
!! ATTTTGTAGCTTGCGTAATT+TGG + chr8_2:59371510-59371529 Msa1258200:intron 30.0%
TCTTAAATCAAAGGTTTCGT+CGG + chr8_2:59371733-59371752 Msa1258200:intron 30.0%
GGAGTGGAATTAAAAGTTAA+AGG - chr8_2:59371807-59371826 None:intergenic 30.0%
! TTCTTCCTTGATGATATAAC+TGG + chr8_2:59371844-59371863 Msa1258200:CDS 30.0%
CAAATCCAGTTATATCATCA+AGG - chr8_2:59371852-59371871 None:intergenic 30.0%
! TGACAGTAGTTGCATTTTTA+AGG + chr8_2:59371971-59371990 Msa1258200:intron 30.0%
ATGAAAAAAATATCCTCTGC+AGG + chr8_2:59372073-59372092 Msa1258200:intron 30.0%
TGAAAAAAATATCCTCTGCA+GGG + chr8_2:59372074-59372093 Msa1258200:intron 30.0%
AAAATGAAACTAAAAGGCTC+CGG - chr8_2:59372309-59372328 None:intergenic 30.0%
!! TTTCATTTTCACTTGGTTTG+CGG + chr8_2:59372320-59372339 Msa1258200:CDS 30.0%
TAGAGCTAGATATACAATGA+GGG - chr8_2:59372352-59372371 None:intergenic 30.0%
ATAGAGCTAGATATACAATG+AGG - chr8_2:59372353-59372372 None:intergenic 30.0%
!!! AAGGTACGAGTTTTTTAACA+CGG + chr8_2:59372411-59372430 Msa1258200:intron 30.0%
!!! GTTTTTTAACACGGTTTTGT+AGG + chr8_2:59372420-59372439 Msa1258200:intron 30.0%
ACTATACTGTCAATTTCAAG+TGG + chr8_2:59372532-59372551 Msa1258200:CDS 30.0%
! TAACACCACCCTTTAATTTA+TGG + chr8_2:59372676-59372695 Msa1258200:intron 30.0%
ACTTATGCATTACTTCATTC+TGG - chr8_2:59372792-59372811 None:intergenic 30.0%
AGAATGAAGTAATGCATAAG+TGG + chr8_2:59372791-59372810 Msa1258200:exon 30.0%
TAGAGTTATTAGAGTATGCT+AGG - chr8_2:59372826-59372845 None:intergenic 30.0%
ACACAACATAACAAAACATG+AGG - chr8_2:59373009-59373028 None:intergenic 30.0%
CATTGCTTGAACAATGAATA+TGG - chr8_2:59373054-59373073 None:intergenic 30.0%
CGAGAAAAATTTGAGAGTAG+TGG - chr8_2:59368950-59368969 None:intergenic 35.0%
! TACTTTGGTAGCAGTTAACA+TGG - chr8_2:59368992-59369011 None:intergenic 35.0%
TGTTAAAGTGAAGGCTACTT+TGG - chr8_2:59369007-59369026 None:intergenic 35.0%
! ATTTTTCTTTCAGGGAATGC+TGG + chr8_2:59369236-59369255 Msa1258200:intron 35.0%
AAAAAGGAGAAGAAATCCGT+TGG + chr8_2:59369320-59369339 Msa1258200:CDS 35.0%
TCTTCCATTAAGTCTCTCTT+TGG + chr8_2:59369408-59369427 Msa1258200:intron 35.0%
AAGCACTTATGAGACTGTTT+GGG - chr8_2:59369534-59369553 None:intergenic 35.0%
TAAGCACTTATGAGACTGTT+TGG - chr8_2:59369535-59369554 None:intergenic 35.0%
GTTGTGTTGAACAGTATCAA+CGG - chr8_2:59369561-59369580 None:intergenic 35.0%
! CAACACAACTTTTGGATATC+TGG + chr8_2:59369572-59369591 Msa1258200:intron 35.0%
GTCATTCTATTATGAGGGAA+AGG + chr8_2:59369632-59369651 Msa1258200:intron 35.0%
GAATTACTGTTGTGTAGGTT+CGG + chr8_2:59369871-59369890 Msa1258200:intron 35.0%
TACTCTTTGTCGCTCAAAAT+TGG - chr8_2:59369944-59369963 None:intergenic 35.0%
! GAAAAGTCTTCTGTGTTTTG+TGG + chr8_2:59370021-59370040 Msa1258200:intron 35.0%
! GTTTTGTATCTTCCTCTTTC+TGG + chr8_2:59370482-59370501 Msa1258200:intron 35.0%
CAGTAAATTATGCCAGAAAG+AGG - chr8_2:59370497-59370516 None:intergenic 35.0%
GGCATAATTTACTGAACTCA+TGG + chr8_2:59370503-59370522 Msa1258200:intron 35.0%
GTAGTGACAAGAAATATAGG+AGG + chr8_2:59370814-59370833 Msa1258200:intron 35.0%
GACATCAAATGGTGAATCAA+AGG - chr8_2:59371138-59371157 None:intergenic 35.0%
TATGACTTAAGCGTCTGTTT+GGG + chr8_2:59371354-59371373 Msa1258200:intron 35.0%
GAAAGATGGATGACAAAAAG+TGG - chr8_2:59371715-59371734 None:intergenic 35.0%
! TGAGATCACTTATTTGCTAG+AGG + chr8_2:59371870-59371889 Msa1258200:CDS 35.0%
TGGAAACAGTTTATCACCAT+TGG + chr8_2:59372032-59372051 Msa1258200:intron 35.0%
ATTAGAGAGCAAAATGCCAA+CGG + chr8_2:59372102-59372121 Msa1258200:intron 35.0%
ATCATCAAATGGTAATCCGT+TGG - chr8_2:59372121-59372140 None:intergenic 35.0%
!! AACGGATTACCATTTGATGA+TGG + chr8_2:59372120-59372139 Msa1258200:intron 35.0%
GTAACATGATAACAGTCCAT+AGG + chr8_2:59372192-59372211 Msa1258200:intron 35.0%
AGAGCTAGATATACAATGAG+GGG - chr8_2:59372351-59372370 None:intergenic 35.0%
!! ATCTAGCTCTATCACTAACA+AGG + chr8_2:59372361-59372380 Msa1258200:CDS 35.0%
!! TCTAGCTCTATCACTAACAA+GGG + chr8_2:59372362-59372381 Msa1258200:CDS 35.0%
ACTGAAAATACCTCCTTCTT+TGG + chr8_2:59372508-59372527 Msa1258200:CDS 35.0%
CTGAAAATACCTCCTTCTTT+GGG + chr8_2:59372509-59372528 Msa1258200:CDS 35.0%
! ATACTGTCAATTTCAAGTGG+TGG + chr8_2:59372535-59372554 Msa1258200:CDS 35.0%
! AGAGCATTTGACTTTGTTGT+TGG - chr8_2:59372563-59372582 None:intergenic 35.0%
ATTAACATTTGAACCAGCTG+TGG + chr8_2:59372723-59372742 Msa1258200:intron 35.0%
AACTGAAATGGTGTATGACT+CGG + chr8_2:59372746-59372765 Msa1258200:CDS 35.0%
ATGAAGTAATGCATAAGTGG+AGG + chr8_2:59372794-59372813 Msa1258200:exon 35.0%
TAATGGTATCGCTTGAACAT+AGG + chr8_2:59372970-59372989 Msa1258200:intron 35.0%
GTTATGTTGTGTATGCATAC+AGG + chr8_2:59373017-59373036 Msa1258200:intron 35.0%
TGAACAATGAATATGGTTCC+AGG - chr8_2:59373047-59373066 None:intergenic 35.0%
CAGTTAACATGGTGAATGGT+GGG - chr8_2:59368981-59369000 None:intergenic 40.0%
GTAGCAGTTAACATGGTGAA+TGG - chr8_2:59368985-59369004 None:intergenic 40.0%
TAATGGAATGAAGGGGGTTT+GGG - chr8_2:59369052-59369071 None:intergenic 40.0%
! ATAATGGAATGAAGGGGGTT+TGG - chr8_2:59369053-59369072 None:intergenic 40.0%
GATCTATGCTACAATATGGG+AGG - chr8_2:59369298-59369317 None:intergenic 40.0%
TTCTTGCTCAAGTTCACCAA+CGG - chr8_2:59369339-59369358 None:intergenic 40.0%
ATCTCAAGGAGGAACTTATG+TGG + chr8_2:59369682-59369701 Msa1258200:CDS 40.0%
TCTCAAGGAGGAACTTATGT+GGG + chr8_2:59369683-59369702 Msa1258200:CDS 40.0%
CAGTGTTGTCATGCTAAGTA+TGG + chr8_2:59369713-59369732 Msa1258200:intron 40.0%
GCTTCTATGGCTTATGTATC+TGG + chr8_2:59369914-59369933 Msa1258200:CDS 40.0%
TGAAGTCATCATTGTGTCAC+TGG + chr8_2:59370046-59370065 Msa1258200:intron 40.0%
! TTAAGGGTGTGTTTGGATTG+AGG + chr8_2:59370193-59370212 Msa1258200:intron 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG + chr8_2:59370194-59370213 Msa1258200:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr8_2:59370200-59370219 Msa1258200:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr8_2:59370204-59370223 Msa1258200:intron 40.0%
ATACTTAGGGTGTGTTTGGA+TGG - chr8_2:59370402-59370421 None:intergenic 40.0%
ACTGATACTTAGGGTGTGTT+TGG - chr8_2:59370406-59370425 None:intergenic 40.0%
!! ATGGTTGTTTTCCAGAGAGA+AGG + chr8_2:59370522-59370541 Msa1258200:intron 40.0%
!! TGGTTGTTTTCCAGAGAGAA+GGG + chr8_2:59370523-59370542 Msa1258200:intron 40.0%
! AGGGAGTGAAATTGTTGTTG+AGG + chr8_2:59370542-59370561 Msa1258200:CDS 40.0%
! GGGAGTGAAATTGTTGTTGA+GGG + chr8_2:59370543-59370562 Msa1258200:CDS 40.0%
! AAATTGTTGTTGAGGGTCCA+AGG + chr8_2:59370550-59370569 Msa1258200:CDS 40.0%
TTAAGTCATTCTTGCAACGC+TGG + chr8_2:59370678-59370697 Msa1258200:intron 40.0%
CAACGCTGGATAATGAATAC+AGG + chr8_2:59370692-59370711 Msa1258200:intron 40.0%
CTCGTCAATCCCAAATGATA+GGG - chr8_2:59370899-59370918 None:intergenic 40.0%
ACTCGTCAATCCCAAATGAT+AGG - chr8_2:59370900-59370919 None:intergenic 40.0%
CTATGACTTAAGCGTCTGTT+TGG + chr8_2:59371353-59371372 Msa1258200:intron 40.0%
! TCTGTTTGGGAAGGTGATTT+TGG + chr8_2:59371367-59371386 Msa1258200:intron 40.0%
! TTTGGGAAGGTGATTTTGGA+GGG + chr8_2:59371371-59371390 Msa1258200:intron 40.0%
!! AAGGTGATTTTGGAGGGTTT+TGG + chr8_2:59371377-59371396 Msa1258200:intron 40.0%
!!! TGATTTTGGAGGGTTTTGGA+GGG + chr8_2:59371381-59371400 Msa1258200:intron 40.0%
TCCTTTCTATCCCTTCCTTA+GGG - chr8_2:59371586-59371605 None:intergenic 40.0%
TTCCTTTCTATCCCTTCCTT+AGG - chr8_2:59371587-59371606 None:intergenic 40.0%
TGGTAGAATATGACATCAGG+TGG - chr8_2:59371658-59371677 None:intergenic 40.0%
AGCTGGTAGAATATGACATC+AGG - chr8_2:59371661-59371680 None:intergenic 40.0%
AGAAGAACCTAACAGATCAC+AGG - chr8_2:59371828-59371847 None:intergenic 40.0%
TGTCAGATGCTATGACATTC+TGG - chr8_2:59371956-59371975 None:intergenic 40.0%
! GGATGAGTTTTGCAAACCTA+TGG - chr8_2:59372211-59372230 None:intergenic 40.0%
! GTATTTTCAGTTCCGCAGTT+TGG - chr8_2:59372499-59372518 None:intergenic 40.0%
TGACAGTATAGTCCCAAAGA+AGG - chr8_2:59372524-59372543 None:intergenic 40.0%
ACTGAAATGGTGTATGACTC+GGG + chr8_2:59372747-59372766 Msa1258200:CDS 40.0%
TGTATGCATACAGGTATTCC+TGG + chr8_2:59373026-59373045 Msa1258200:intron 40.0%
GCAGTTAACATGGTGAATGG+TGG - chr8_2:59368982-59369001 None:intergenic 45.0%
AATGGAATGAAGGGGGTTTG+GGG - chr8_2:59369051-59369070 None:intergenic 45.0%
GCGAAAGTAGGAGTAATCTG+CGG - chr8_2:59369128-59369147 None:intergenic 45.0%
TGTTGATCTGCAGTGGCTTT+AGG - chr8_2:59369150-59369169 None:intergenic 45.0%
AAAGCCACTGCAGATCAACA+AGG + chr8_2:59369150-59369169 Msa1258200:CDS 45.0%
AAGACCTTGTTGATCTGCAG+TGG - chr8_2:59369157-59369176 None:intergenic 45.0%
! GGGAATGCTGGAGATTTTGA+CGG + chr8_2:59369248-59369267 Msa1258200:intron 45.0%
AAGGAGGAACTTATGTGGGA+AGG + chr8_2:59369687-59369706 Msa1258200:CDS 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr8_2:59370203-59370222 Msa1258200:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr8_2:59370205-59370224 Msa1258200:intron 45.0%
TTAGGGTGTGTTTGGATGGA+GGG - chr8_2:59370398-59370417 None:intergenic 45.0%
CAATTTCACTCCCTTCTCTC+TGG - chr8_2:59370536-59370555 None:intergenic 45.0%
CAATCCTAATGCAACCACAG+TGG - chr8_2:59371042-59371061 None:intergenic 45.0%
ACTTAAGCGTCTGTTTGGGA+AGG + chr8_2:59371358-59371377 Msa1258200:intron 45.0%
! GTTTGGGAAGGTGATTTTGG+AGG + chr8_2:59371370-59371389 Msa1258200:intron 45.0%
!! GTGATTTTGGAGGGTTTTGG+AGG + chr8_2:59371380-59371399 Msa1258200:intron 45.0%
TCCTTAGGGTATGTTTGGGA+GGG - chr8_2:59371572-59371591 None:intergenic 45.0%
TTCCTTAGGGTATGTTTGGG+AGG - chr8_2:59371573-59371592 None:intergenic 45.0%
TCCCAAACATACCCTAAGGA+AGG + chr8_2:59371572-59371591 Msa1258200:intron 45.0%
CCCTTCCTTAGGGTATGTTT+GGG - chr8_2:59371576-59371595 None:intergenic 45.0%
CCCAAACATACCCTAAGGAA+GGG + chr8_2:59371573-59371592 Msa1258200:intron 45.0%
TCCCTTCCTTAGGGTATGTT+TGG - chr8_2:59371577-59371596 None:intergenic 45.0%
ACCCTAAGGAAGGGATAGAA+AGG + chr8_2:59371582-59371601 Msa1258200:intron 45.0%
TTCCACTCCTGTGATCTGTT+AGG + chr8_2:59371818-59371837 Msa1258200:intron 45.0%
AACCTAACAGATCACAGGAG+TGG - chr8_2:59371823-59371842 None:intergenic 45.0%
CTCTAATGTTTACCCTGCAG+AGG - chr8_2:59372089-59372108 None:intergenic 45.0%
CAGTATAGTCCCAAAGAAGG+AGG - chr8_2:59372521-59372540 None:intergenic 45.0%
AACCAGCTGTGGAACTGAAA+TGG + chr8_2:59372734-59372753 Msa1258200:intron 45.0%
CGCTTGAACATAGGTGCATT+TGG + chr8_2:59372979-59372998 Msa1258200:intron 45.0%
!! ATATATATATATATGAATAA+TGG + chr8_2:59369807-59369826 Msa1258200:intron 5.0%
!!! TGATTATTTAAATTTTAAAA+GGG + chr8_2:59372466-59372485 Msa1258200:intron 5.0%
!! ACGAGGGGGTGTTAAAGTGA+AGG - chr8_2:59369016-59369035 None:intergenic 50.0%
!! CAGTGGCTTTAGGCGAAAGT+AGG - chr8_2:59369140-59369159 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr8_2:59370209-59370228 Msa1258200:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + chr8_2:59370210-59370229 Msa1258200:intron 50.0%
CTTAGGGTGTGTTTGGATGG+AGG - chr8_2:59370399-59370418 None:intergenic 50.0%
TTACTTCGAAGGCTGCACCT+TGG - chr8_2:59370570-59370589 None:intergenic 50.0%
CTAATGCAACCACAGTGGCT+GGG - chr8_2:59371037-59371056 None:intergenic 50.0%
! TATGTTTGGGAGGGGGGTTT+TGG - chr8_2:59371563-59371582 None:intergenic 50.0%
TTAGGGTATGTTTGGGAGGG+GGG - chr8_2:59371569-59371588 None:intergenic 50.0%
CTTAGGGTATGTTTGGGAGG+GGG - chr8_2:59371570-59371589 None:intergenic 50.0%
CCTTAGGGTATGTTTGGGAG+GGG - chr8_2:59371571-59371590 None:intergenic 50.0%
TCAGTTCCGCAGTTTGGACA+GGG - chr8_2:59372493-59372512 None:intergenic 50.0%
TTCAGTTCCGCAGTTTGGAC+AGG - chr8_2:59372494-59372513 None:intergenic 50.0%
CACCATTTCAGTTCCACAGC+TGG - chr8_2:59372739-59372758 None:intergenic 50.0%
! ACGTGGCGGGAATTGAAGTG+AGG - chr8_2:59369096-59369115 None:intergenic 55.0%
GTAGGAGTAATCTGCGGCGA+AGG - chr8_2:59369122-59369141 None:intergenic 55.0%
CCTAATGCAACCACAGTGGC+TGG - chr8_2:59371038-59371057 None:intergenic 55.0%
CCAGCCACTGTGGTTGCATT+AGG + chr8_2:59371035-59371054 Msa1258200:CDS 55.0%
!!! TTTGGGAGGGGGGTTTTGGA+GGG - chr8_2:59371559-59371578 None:intergenic 55.0%
CCCCTCCCAAACATACCCTA+AGG + chr8_2:59371568-59371587 Msa1258200:intron 55.0%
GGATTGTTGAGTGCAGCTGC+CGG + chr8_2:59372287-59372306 Msa1258200:intron 55.0%
AAGGGTCCCTGTCCAAACTG+CGG + chr8_2:59372484-59372503 Msa1258200:intron 55.0%
GGTGCAGAACATGGACGAGG+GGG - chr8_2:59369030-59369049 None:intergenic 60.0%
GGGTGCAGAACATGGACGAG+GGG - chr8_2:59369031-59369050 None:intergenic 60.0%
GGGGTGCAGAACATGGACGA+GGG - chr8_2:59369032-59369051 None:intergenic 60.0%
TGGGGTGCAGAACATGGACG+AGG - chr8_2:59369033-59369052 None:intergenic 60.0%
! GGGGTTTGGGGTGCAGAACA+TGG - chr8_2:59369039-59369058 None:intergenic 60.0%
! ATCTGCGGCGAAGGCATACG+TGG - chr8_2:59369113-59369132 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr8_2:59370213-59370232 Msa1258200:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr8_2:59370214-59370233 Msa1258200:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr8_2:59370215-59370234 Msa1258200:intron 60.0%
!!! AGGGGGGTTTTGGAGGGAAG+GGG - chr8_2:59371553-59371572 None:intergenic 60.0%
!!! GAGGGGGGTTTTGGAGGGAA+GGG - chr8_2:59371554-59371573 None:intergenic 60.0%
!! GTTTGGGAGGGGGGTTTTGG+AGG - chr8_2:59371560-59371579 None:intergenic 60.0%
! TGCGGCGAAGGCATACGTGG+CGG - chr8_2:59369110-59369129 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr8_2:59370218-59370237 Msa1258200:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr8_2:59370219-59370238 Msa1258200:intron 65.0%
CAGTGGCTGGGACGTTCAGC+AGG - chr8_2:59371025-59371044 None:intergenic 65.0%
GCTGAACGTCCCAGCCACTG+TGG + chr8_2:59371025-59371044 Msa1258200:CDS 65.0%
!!! GGGGTTTTGGAGGGAAGGGG+AGG - chr8_2:59371550-59371569 None:intergenic 65.0%
!!! GGAGGGGGGTTTTGGAGGGA+AGG - chr8_2:59371555-59371574 None:intergenic 65.0%
! GCGGCGAAGGCATACGTGGC+GGG - chr8_2:59369109-59369128 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 59368929 59373077 59368929 ID=Msa1258200;Name=Msa1258200
chr8_2 mRNA 59368929 59373077 59368929 ID=Msa1258200-mRNA-1;Parent=Msa1258200;Name=Msa1258200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=62|1|1|1|0.8|0.81|11|61|319
chr8_2 exon 59368929 59369171 59368929 ID=Msa1258200-mRNA-1:exon:18405;Parent=Msa1258200-mRNA-1
chr8_2 exon 59369249 59369376 59369249 ID=Msa1258200-mRNA-1:exon:18406;Parent=Msa1258200-mRNA-1
chr8_2 exon 59369633 59369729 59369633 ID=Msa1258200-mRNA-1:exon:18407;Parent=Msa1258200-mRNA-1
chr8_2 exon 59369888 59369988 59369888 ID=Msa1258200-mRNA-1:exon:18408;Parent=Msa1258200-mRNA-1
chr8_2 exon 59370537 59370593 59370537 ID=Msa1258200-mRNA-1:exon:18409;Parent=Msa1258200-mRNA-1
chr8_2 exon 59370984 59371060 59370984 ID=Msa1258200-mRNA-1:exon:18410;Parent=Msa1258200-mRNA-1
chr8_2 exon 59371840 59371891 59371840 ID=Msa1258200-mRNA-1:exon:18411;Parent=Msa1258200-mRNA-1
chr8_2 exon 59372303 59372413 59372303 ID=Msa1258200-mRNA-1:exon:18412;Parent=Msa1258200-mRNA-1
chr8_2 exon 59372487 59372584 59372487 ID=Msa1258200-mRNA-1:exon:18413;Parent=Msa1258200-mRNA-1
chr8_2 exon 59372740 59372815 59372740 ID=Msa1258200-mRNA-1:exon:18414;Parent=Msa1258200-mRNA-1
chr8_2 exon 59373035 59373077 59373035 ID=Msa1258200-mRNA-1:exon:18415;Parent=Msa1258200-mRNA-1
chr8_2 five_prime_UTR 59368929 59368990 59368929 ID=Msa1258200-mRNA-1:five_prime_utr;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59368991 59369171 59368991 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59369249 59369376 59369249 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59369633 59369729 59369633 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59369888 59369988 59369888 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59370537 59370593 59370537 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59370984 59371060 59370984 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59371840 59371891 59371840 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59372303 59372413 59372303 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59372487 59372584 59372487 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 CDS 59372740 59372797 59372740 ID=Msa1258200-mRNA-1:cds;Parent=Msa1258200-mRNA-1
chr8_2 three_prime_UTR 59372798 59372815 59372798 ID=Msa1258200-mRNA-1:three_prime_utr;Parent=Msa1258200-mRNA-1
chr8_2 three_prime_UTR 59373035 59373077 59373035 ID=Msa1258200-mRNA-1:three_prime_utr;Parent=Msa1258200-mRNA-1
Gene Sequence

>Msa1258200

ATGTTAACTGCTACCAAAGTAGCCTTCACTTTAACACCCCCTCGTCCATGTTCTGCACCCCAAACCCCCTTCATTCCATTATCTTTTTCTTCTGTTTCTCGTCCTCACTTCAATTCCCGCCACGTATGCCTTCGCCGCAGATTACTCCTACTTTCGCCTAAAGCCACTGCAGATCAACAAGGGAATGCTGGAGATTTTGACGGAGATGCTGTTATTGATACTAATGTCCTCCCATATTGTAGCATAGATCAAAAAAAGGAGAAGAAATCCGTTGGTGAACTTGAGCAAGAATTTCTTCAAGCACTCCAATCATTCTATTATGAGGGAAAGGCTATTATGTCAAATGAAGAATTTGATAATCTCAAGGAGGAACTTATGTGGGAAGGAAGCAGTGTTGTCATGCTAAGTTCGGATGAACAAAAATTTCTTGAAGCTTCTATGGCTTATGTATCTGGAAATCCAATTTTGAGCGACAAAGAGTATGATAAGTTGAAACTGAATCTAAAGAGAGAAGGGAGTGAAATTGTTGTTGAGGGTCCAAGGTGCAGCCTTCGAAGTAAAAAAGTTTACAGTGACCTGTCTGTTGACTATTTAAAGATGTTCCTGCTGAACGTCCCAGCCACTGTGGTTGCATTAGGATTGTTCTTCTTCCTTGATGATATAACTGGATTTGAGATCACTTATTTGCTAGAGCTGCCGGAGCCTTTTAGTTTCATTTTCACTTGGTTTGCGGCTGTTCCCCTCATTGTATATCTAGCTCTATCACTAACAAGGGCCATTATCAAAGATTTTGTGATTTTAAAGGGTCCCTGTCCAAACTGCGGAACTGAAAATACCTCCTTCTTTGGGACTATACTGTCAATTTCAAGTGGTGGTTCCAACAACAAAGTCAAATGCTCTGACTGTGGAACTGAAATGGTGTATGACTCGGGTACAAGATTGATTACATTGCCAGAATGA

Protein sequence

>Msa1258200

MLTATKVAFTLTPPRPCSAPQTPFIPLSFSSVSRPHFNSRHVCLRRRLLLLSPKATADQQGNAGDFDGDAVIDTNVLPYCSIDQKKEKKSVGELEQEFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILSDKEYDKLKLNLKREGSEIVVEGPRCSLRSKKVYSDLSVDYLKMFLLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSFIFTWFAAVPLIVYLALSLTRAIIKDFVILKGPCPNCGTENTSFFGTILSISSGGSNNKVKCSDCGTEMVYDSGTRLITLPE*