AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0028050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0028050 MtrunA17_Chr1g0184461 82.318 509 85 1 1 504 1 509 0.0 841
Msa0028050 MtrunA17_Chr1g0184421 82.556 493 81 2 12 499 12 504 0.0 817
Msa0028050 MtrunA17_Chr1g0184471 87.105 411 33 1 1 411 1 391 0.0 691
Msa0028050 MtrunA17_Chr7g0260831 63.866 476 171 1 25 500 29 503 0.0 633
Msa0028050 MtrunA17_Chr7g0260821 61.884 467 177 1 34 500 39 504 0.0 607
Msa0028050 MtrunA17_Chr7g0255131 46.123 503 243 9 16 499 15 508 9.37e-149 435
Msa0028050 MtrunA17_Chr3g0119681 44.016 493 245 7 30 500 35 518 9.46e-139 410
Msa0028050 MtrunA17_Chr7g0225531 42.574 505 271 8 5 500 18 512 2.20e-138 409
Msa0028050 MtrunA17_Chr4g0026941 44.301 465 231 10 51 499 87 539 5.73e-126 378
Msa0028050 MtrunA17_Chr2g0321171 41.358 486 262 9 15 496 29 495 6.91e-121 363
Msa0028050 MtrunA17_Chr1g0178971 41.164 464 247 8 48 499 63 512 2.01e-118 358
Msa0028050 MtrunA17_Chr4g0038271 40.800 500 255 16 27 499 75 560 7.89e-113 345
Msa0028050 MtrunA17_Chr1g0164321 38.618 492 263 12 37 499 66 547 6.18e-111 340
Msa0028050 MtrunA17_Chr8g0348751 38.536 519 286 12 4 499 2 510 2.15e-110 338
Msa0028050 MtrunA17_Chr3g0104351 38.193 487 262 11 35 494 37 511 6.62e-106 326
Msa0028050 MtrunA17_Chr5g0429651 37.602 492 266 11 35 499 31 508 1.42e-104 322
Msa0028050 MtrunA17_Chr8g0387001 36.660 521 293 12 3 502 4 508 3.89e-104 321
Msa0028050 MtrunA17_Chr8g0351391 37.736 477 269 11 38 499 48 511 3.43e-99 308
Msa0028050 MtrunA17_Chr4g0067191 36.142 534 278 17 8 499 3 515 4.62e-98 305
Msa0028050 MtrunA17_Chr8g0351311 35.654 474 276 10 38 495 48 508 9.09e-94 294
Msa0028050 MtrunA17_Chr1g0204271 36.322 435 249 9 38 456 42 464 7.90e-93 291
Msa0028050 MtrunA17_Chr6g0449361 32.879 514 319 11 1 499 1 503 1.23e-92 291
Msa0028050 MtrunA17_Chr1g0171041 34.563 515 296 15 11 499 7 506 5.75e-91 286
Msa0028050 MtrunA17_Chr7g0227291 34.274 496 302 11 16 499 11 494 1.73e-90 285
Msa0028050 MtrunA17_Chr7g0214931 41.039 385 207 7 37 403 57 439 2.82e-90 283
Msa0028050 MtrunA17_Chr6g0449381 35.023 434 256 9 82 499 82 505 1.51e-88 280
Msa0028050 MtrunA17_Chr7g0227281 33.733 501 305 12 11 499 9 494 2.05e-88 280
Msa0028050 MtrunA17_Chr6g0449341 33.205 518 308 11 10 499 56 563 2.75e-88 281
Msa0028050 MtrunA17_Chr4g0004481 34.672 473 285 12 38 498 31 491 4.16e-87 276
Msa0028050 MtrunA17_Chr8g0380501 35.185 432 258 9 81 501 73 493 2.59e-86 274
Msa0028050 MtrunA17_Chr1g0163391 34.951 515 300 16 7 499 1 502 2.94e-86 274
Msa0028050 MtrunA17_Chr8g0351461 36.784 454 253 12 35 467 38 478 2.06e-84 270
Msa0028050 MtrunA17_Chr6g0449351 32.488 434 271 8 81 501 41 465 2.07e-84 269
Msa0028050 MtrunA17_Chr1g0163491 33.531 507 303 13 15 499 27 521 2.30e-84 270
Msa0028050 MtrunA17_Chr6g0449331 32.819 518 310 12 10 499 8 515 2.34e-83 267
Msa0028050 MtrunA17_Chr8g0351401 36.344 454 255 11 35 467 39 479 7.96e-83 266
Msa0028050 MtrunA17_Chr1g0163281 33.858 508 301 15 12 499 27 519 2.22e-82 265
Msa0028050 MtrunA17_Chr1g0163501 32.934 501 306 13 17 499 11 499 3.51e-82 263
Msa0028050 MtrunA17_Chr8g0351421 33.745 486 284 12 5 467 9 479 1.72e-81 262
Msa0028050 MtrunA17_Chr1g0163351 33.002 503 302 15 19 499 16 505 1.03e-80 260
Msa0028050 MtrunA17_Chr8g0351441 33.947 489 281 14 5 467 6 478 2.15e-80 259
Msa0028050 MtrunA17_Chr1g0163401 33.141 519 302 15 11 499 9 512 4.75e-79 256
Msa0028050 MtrunA17_Chr1g0163211 31.250 512 317 13 7 499 6 501 4.92e-79 255
Msa0028050 MtrunA17_Chr1g0163421 32.630 521 290 17 15 499 45 540 5.99e-79 256
Msa0028050 MtrunA17_Chr1g0164351 40.379 369 194 9 27 372 57 422 6.40e-79 253
Msa0028050 MtrunA17_Chr1g0163511 31.238 525 315 16 7 499 8 518 2.70e-78 254
Msa0028050 MtrunA17_Chr1g0163461 30.651 522 304 15 12 499 22 519 6.57e-77 250
Msa0028050 MtrunA17_Chr1g0183611 34.625 413 238 9 89 478 3 406 2.67e-74 240
Msa0028050 MtrunA17_Chr1g0163451 29.490 529 298 14 14 499 28 524 2.97e-74 243
Msa0028050 MtrunA17_Chr1g0163431 37.607 351 201 9 83 418 42 389 9.07e-68 223
Msa0028050 MtrunA17_Chr1g0163371 38.532 218 121 4 289 499 11 222 8.89e-47 162
Msa0028050 MtrunA17_Chr5g0403451 36.328 256 123 6 277 499 31 279 6.05e-46 162
Msa0028050 MtrunA17_Chr1g0204241 32.278 316 183 9 183 494 4 292 2.93e-43 155
Msa0028050 MtrunA17_Chr5g0403441 32.781 302 179 8 8 308 18 296 7.55e-43 154
Msa0028050 MtrunA17_Chr1g0184481 90.278 72 6 1 430 500 1 72 1.82e-39 137
Msa0028050 MtrunA17_Chr2g0309301 43.902 164 86 2 171 333 1 159 7.83e-39 139
Msa0028050 MtrunA17_Chr2g0308941 34.807 181 106 2 80 249 14 193 6.37e-31 119
Msa0028050 MtrunA17_Chr0c19g0493771 26.536 407 267 15 76 466 226 616 4.43e-30 124
Msa0028050 MtrunA17_Chr1g0163361 31.799 239 155 7 14 248 27 261 1.27e-29 117
Msa0028050 MtrunA17_Chr1g0179811 25.917 436 290 16 81 500 122 540 2.11e-27 115
Msa0028050 MtrunA17_Chr7g0215181 25.069 363 243 8 112 466 137 478 8.68e-26 110
Msa0028050 MtrunA17_Chr2g0313771 25.122 410 258 16 78 466 111 492 3.08e-24 105
Msa0028050 MtrunA17_Chr1g0174471 22.718 471 318 15 6 452 25 473 1.01e-23 104
Msa0028050 MtrunA17_Chr7g0248991 26.050 357 231 14 80 416 8 351 1.07e-23 102
Msa0028050 MtrunA17_Chr6g0457421 26.486 370 227 12 113 466 136 476 5.66e-23 102
Msa0028050 MtrunA17_Chr2g0313821 24.036 441 264 15 81 484 105 511 9.79e-23 101
Msa0028050 MtrunA17_Chr2g0313781 23.641 423 269 16 100 484 117 523 1.13e-22 101
Msa0028050 MtrunA17_Chr5g0396521 23.992 471 297 18 81 503 117 574 2.39e-22 100
Msa0028050 MtrunA17_Chr2g0307291 24.183 459 294 16 53 484 82 513 2.67e-22 100
Msa0028050 MtrunA17_Chr5g0443401 25.413 484 294 19 6 466 8 447 3.31e-22 99.4
Msa0028050 MtrunA17_Chr2g0313831 24.835 455 267 20 68 484 94 511 4.02e-22 99.4
Msa0028050 MtrunA17_Chr2g0307301 24.183 459 294 16 53 484 82 513 8.01e-22 98.6
Msa0028050 MtrunA17_Chr1g0203151 23.846 390 241 14 100 466 124 480 1.69e-21 97.4
Msa0028050 MtrunA17_Chr3g0128461 24.439 401 253 12 110 484 143 519 1.76e-21 97.4
Msa0028050 MtrunA17_Chr8g0354531 24.074 378 245 12 108 466 260 614 2.18e-21 97.8
Msa0028050 MtrunA17_Chr2g0313791 25.366 410 237 16 110 484 131 506 2.28e-21 97.1
Msa0028050 MtrunA17_Chr2g0309311 38.255 149 65 3 290 438 30 151 2.40e-21 91.7
Msa0028050 MtrunA17_Chr6g0479681 23.573 403 242 14 100 466 126 498 2.97e-21 97.1
Msa0028050 MtrunA17_Chr1g0203141 22.280 386 252 12 100 466 128 484 3.95e-21 96.7
Msa0028050 MtrunA17_Chr8g0354511 24.819 415 250 16 80 466 113 493 6.71e-21 95.9
Msa0028050 MtrunA17_Chr1g0174451 25.107 466 298 19 14 452 17 458 1.04e-20 95.1
Msa0028050 MtrunA17_Chr2g0313761 24.694 409 258 13 104 484 120 506 2.92e-20 94.0
Msa0028050 MtrunA17_Chr2g0313801 22.983 409 253 14 110 484 131 511 6.19e-20 92.8
Msa0028050 MtrunA17_Chr8g0388921 23.293 498 301 19 1 467 1 448 6.70e-20 92.4
Msa0028050 MtrunA17_Chr4g0004601 22.906 406 268 12 81 468 124 502 1.10e-19 92.0
Msa0028050 MtrunA17_Chr4g0058231 24.494 494 318 23 8 473 7 473 1.67e-19 91.3
Msa0028050 MtrunA17_Chr8g0362731 25.000 388 269 11 87 467 6 378 2.56e-19 90.1
Msa0028050 MtrunA17_Chr8g0357121 43.878 98 50 1 367 464 25 117 2.79e-19 84.3
Msa0028050 MtrunA17_Chr8g0390881 24.385 488 313 20 6 466 10 468 3.11e-19 90.5
Msa0028050 MtrunA17_Chr2g0308951 37.113 97 60 1 153 249 4 99 3.14e-19 83.2
Msa0028050 MtrunA17_Chr1g0174481 23.555 467 304 18 11 452 14 452 3.15e-19 90.5
Msa0028050 MtrunA17_Chr7g0218611 23.144 458 316 16 25 466 27 464 4.34e-19 90.1
Msa0028050 MtrunA17_Chr4g0030711 29.050 179 121 4 291 466 304 479 4.37e-19 90.1
Msa0028050 MtrunA17_Chr2g0310381 22.458 472 327 16 6 461 3 451 5.73e-19 89.7
Msa0028050 MtrunA17_Chr4g0030701 29.310 174 117 4 296 466 306 476 9.32e-19 89.4
Msa0028050 MtrunA17_Chr1g0207841 28.507 221 135 8 276 481 287 499 1.01e-18 89.0
Msa0028050 MtrunA17_Chr8g0380471 22.326 533 329 20 1 502 1 479 1.09e-18 89.0
Msa0028050 MtrunA17_Chr8g0387101 25.545 321 194 9 194 500 218 507 1.11e-18 89.0
Msa0028050 MtrunA17_Chr8g0354571 22.983 409 263 15 81 466 114 493 1.15e-18 89.0
Msa0028050 MtrunA17_Chr8g0372711 24.609 447 280 19 23 455 40 443 1.43e-18 88.6
Msa0028050 MtrunA17_Chr5g0395321 23.077 494 331 16 3 479 11 472 1.91e-18 88.2
Msa0028050 MtrunA17_Chr4g0014051 24.939 409 244 14 110 484 144 523 2.14e-18 88.2
Msa0028050 MtrunA17_Chr6g0484811 20.921 478 339 15 6 466 14 469 3.94e-18 87.0
Msa0028050 MtrunA17_Chr1g0164341 39.806 103 56 3 397 499 1 97 3.99e-18 80.1
Msa0028050 MtrunA17_Chr4g0046321 25.681 257 169 7 229 466 217 470 4.81e-18 87.0
Msa0028050 MtrunA17_Chr5g0446131 22.983 409 265 14 104 484 123 509 5.16e-18 87.0
Msa0028050 MtrunA17_Chr1g0164211 23.982 442 280 13 35 452 35 444 5.45e-18 86.7
Msa0028050 MtrunA17_Chr7g0235261 23.559 399 274 13 81 468 103 481 7.63e-18 86.3
Msa0028050 MtrunA17_Chr4g0046351 24.609 256 173 6 229 466 217 470 8.91e-18 86.3
Msa0028050 MtrunA17_Chr4g0046331 24.806 258 172 6 229 466 217 472 1.06e-17 85.9
Msa0028050 MtrunA17_Chr6g0466941 21.281 531 368 16 3 500 4 517 1.55e-17 85.5
Msa0028050 MtrunA17_Chr6g0472221 22.021 386 257 14 100 467 137 496 2.45e-17 84.7
Msa0028050 MtrunA17_Chr8g0339331 23.591 479 318 18 26 477 34 491 3.38e-17 84.3
Msa0028050 MtrunA17_Chr5g0395381 23.207 474 295 16 3 461 11 430 3.39e-17 84.3
Msa0028050 MtrunA17_Chr6g0451681 28.061 196 129 4 290 477 262 453 3.94e-17 84.0
Msa0028050 MtrunA17_Chr2g0310391 22.458 472 327 16 6 461 3 451 4.76e-17 84.0
Msa0028050 MtrunA17_Chr2g0280121 24.351 308 199 6 201 500 229 510 6.05e-17 83.6
Msa0028050 MtrunA17_Chr8g0357111 33.333 159 101 4 35 193 38 191 6.73e-17 79.3
Msa0028050 MtrunA17_Chr5g0419451 22.323 439 289 16 81 496 105 514 7.66e-17 83.2
Msa0028050 MtrunA17_Chr8g0377341 23.270 477 337 14 5 471 41 498 1.26e-16 82.8
Msa0028050 MtrunA17_Chr8g0344181 23.965 459 294 20 35 467 42 471 1.38e-16 82.4
Msa0028050 MtrunA17_Chr7g0224561 22.699 489 323 21 6 466 5 466 1.60e-16 82.4
Msa0028050 MtrunA17_Chr2g0313751 23.659 410 261 14 104 484 152 538 1.66e-16 82.4
Msa0028050 MtrunA17_Chr7g0224551 22.904 489 322 21 6 466 5 466 1.77e-16 82.0
Msa0028050 MtrunA17_Chr8g0364651 26.459 257 172 7 258 500 246 499 2.21e-16 81.6
Msa0028050 MtrunA17_Chr7g0246221 20.833 504 348 14 1 479 1 478 2.54e-16 81.6
Msa0028050 MtrunA17_Chr6g0458561 29.744 195 130 4 286 477 314 504 3.86e-16 81.3
Msa0028050 MtrunA17_Chr2g0280081 23.701 308 201 6 201 500 724 1005 5.98e-16 81.3
Msa0028050 MtrunA17_Chr2g0280081 29.189 185 119 3 290 466 290 470 8.84e-15 77.4
Msa0028050 MtrunA17_Chr2g0280011 27.189 217 144 4 293 500 1 212 6.85e-16 76.6
Msa0028050 MtrunA17_Chr5g0430081 22.857 490 319 19 6 466 7 466 7.44e-16 80.1
Msa0028050 MtrunA17_Chr7g0255531 22.736 497 306 19 19 478 15 470 1.36e-15 79.3
Msa0028050 MtrunA17_Chr2g0280071 26.364 220 148 4 289 499 322 536 1.59e-15 79.7
Msa0028050 MtrunA17_Chr8g0344191 25.510 490 301 23 5 466 49 502 1.89e-15 79.0
Msa0028050 MtrunA17_Chr4g0046681 28.846 208 139 4 299 502 30 232 2.78e-15 75.5
Msa0028050 MtrunA17_Chr8g0344151 22.894 463 292 17 35 466 40 468 4.04e-15 77.8
Msa0028050 MtrunA17_Chr3g0116681 23.144 458 308 13 6 445 15 446 4.70e-15 77.8
Msa0028050 MtrunA17_Chr5g0430131 21.730 497 318 18 7 466 5 467 6.37e-15 77.4
Msa0028050 MtrunA17_Chr8g0351801 28.649 185 118 5 290 466 304 482 7.27e-15 77.0
Msa0028050 MtrunA17_Chr7g0218601 22.774 483 330 20 17 479 15 474 1.04e-14 76.6
Msa0028050 MtrunA17_Chr1g0193811 21.088 441 292 12 81 497 106 514 1.31e-14 76.3
Msa0028050 MtrunA17_Chr6g0484841 22.105 475 305 18 18 461 22 462 1.33e-14 76.3
Msa0028050 MtrunA17_Chr4g0008101 21.828 536 359 19 3 500 10 523 1.52e-14 76.3
Msa0028050 MtrunA17_Chr1g0162811 21.328 497 315 19 6 466 8 464 1.85e-14 75.9
Msa0028050 MtrunA17_Chr5g0403351 22.222 459 282 16 25 447 29 448 1.95e-14 75.9
Msa0028050 MtrunA17_Chr1g0156101 23.003 313 213 8 174 466 171 475 2.00e-14 75.9
Msa0028050 MtrunA17_Chr8g0382901 22.833 473 308 17 5 461 2 433 2.37e-14 76.3
Msa0028050 MtrunA17_Chr8g0382901 21.304 460 326 17 15 461 476 912 4.46e-13 72.0
Msa0028050 MtrunA17_Chr5g0430071 25.000 204 134 6 276 466 124 321 3.70e-14 73.9
Msa0028050 MtrunA17_Chr8g0339311 24.309 362 242 11 123 461 135 487 4.17e-14 74.7
Msa0028050 MtrunA17_Chr5g0409051 23.323 313 199 10 201 500 225 509 6.59e-14 73.9
Msa0028050 MtrunA17_Chr5g0402981 25.888 197 138 4 311 503 3 195 7.69e-14 70.5
Msa0028050 MtrunA17_Chr6g0451641 25.468 267 171 11 226 477 240 493 1.15e-13 73.2
Msa0028050 MtrunA17_Chr5g0430101 25.275 182 126 4 289 466 290 465 1.66e-13 72.8
Msa0028050 MtrunA17_Chr5g0430091 22.607 491 325 19 3 466 6 468 1.76e-13 72.8
Msa0028050 MtrunA17_Chr6g0451781 23.322 283 195 9 209 477 259 533 1.97e-13 72.8
Msa0028050 MtrunA17_Chr5g0431641 23.667 469 302 20 12 452 8 448 2.04e-13 72.4
Msa0028050 MtrunA17_Chr5g0401681 21.656 471 307 17 6 451 9 442 2.31e-13 72.4
Msa0028050 MtrunA17_Chr4g0011901 22.174 460 328 16 20 466 18 460 3.90e-13 71.6
Msa0028050 MtrunA17_Chr3g0094231 23.762 303 198 12 218 503 217 503 4.17e-13 71.6
Msa0028050 MtrunA17_Chr8g0390871 23.757 181 129 4 289 466 16 190 4.70e-13 68.9
Msa0028050 MtrunA17_Chr7g0254641 21.154 468 309 17 25 458 33 474 5.51e-13 71.2
Msa0028050 MtrunA17_Chr8g0362481 22.750 400 259 16 81 452 11 388 5.68e-13 70.9
Msa0028050 MtrunA17_Chr8g0364081 21.013 395 260 10 104 466 136 510 6.42e-13 70.9
Msa0028050 MtrunA17_Chr1g0154731 22.512 422 260 18 81 475 102 483 6.43e-13 70.9
Msa0028050 MtrunA17_Chr4g0047661 21.616 458 308 17 17 447 29 462 8.26e-13 70.5
Msa0028050 MtrunA17_Chr4g0058211 26.804 194 129 6 291 477 7 194 9.13e-13 67.8
Msa0028050 MtrunA17_Chr4g0044851 22.673 419 242 16 76 467 78 441 1.04e-12 70.1
Msa0028050 MtrunA17_Chr4g0011851 26.554 177 121 4 293 466 9 179 1.22e-12 67.4
Msa0028050 MtrunA17_Chr5g0430031 21.704 493 323 20 5 466 8 468 1.38e-12 70.1
Msa0028050 MtrunA17_Chr5g0445461 21.748 469 319 17 5 452 9 450 1.50e-12 69.7
Msa0028050 MtrunA17_Chr2g0280041 26.106 226 141 7 290 500 322 536 3.29e-12 68.9
Msa0028050 MtrunA17_Chr4g0052861 21.692 461 301 16 16 452 19 443 3.74e-12 68.6
Msa0028050 MtrunA17_Chr4g0047631 22.921 493 317 21 5 466 16 476 3.88e-12 68.6
Msa0028050 MtrunA17_Chr3g0101691 23.614 487 295 24 1 447 1 450 4.19e-12 68.6
Msa0028050 MtrunA17_Chr3g0116741 20.930 473 319 18 3 452 23 463 4.40e-12 68.2
Msa0028050 MtrunA17_Chr5g0445531 22.384 411 283 14 71 466 74 463 4.82e-12 68.2
Msa0028050 MtrunA17_Chr5g0403331 29.167 192 118 7 264 447 268 449 6.01e-12 67.8
Msa0028050 MtrunA17_Chr1g0164331 35.955 89 53 1 375 463 3 87 7.31e-12 63.2
Msa0028050 MtrunA17_Chr3g0082701 26.042 288 183 12 209 477 225 501 7.33e-12 67.8
Msa0028050 MtrunA17_Chr4g0039901 25.000 232 156 5 240 459 235 460 8.54e-12 67.4
Msa0028050 MtrunA17_Chr2g0314721 26.512 215 143 6 260 466 264 471 8.59e-12 67.4
Msa0028050 MtrunA17_Chr3g0101611 20.430 465 327 14 22 466 26 467 9.99e-12 67.0
Msa0028050 MtrunA17_Chr8g0372251 25.532 235 139 8 240 449 229 452 1.08e-11 67.0
Msa0028050 MtrunA17_Chr3g0107511 23.644 461 283 18 17 451 15 432 1.24e-11 67.0
Msa0028050 MtrunA17_Chr6g0451771 24.468 188 135 4 293 477 15 198 1.71e-11 64.3
Msa0028050 MtrunA17_Chr3g0141801 23.381 278 168 11 247 504 234 486 2.33e-11 65.9
Msa0028050 MtrunA17_Chr5g0408181 24.146 410 242 18 76 467 76 434 2.69e-11 65.9
Msa0028050 MtrunA17_Chr5g0446151 22.993 461 295 21 17 451 24 450 3.01e-11 65.9
Msa0028050 MtrunA17_Chr3g0101701 23.529 476 309 20 1 447 1 450 3.66e-11 65.5
Msa0028050 MtrunA17_Chr3g0086651 24.713 174 126 3 296 466 299 470 3.91e-11 65.5
Msa0028050 MtrunA17_Chr5g0443731 21.847 444 292 17 26 451 21 427 4.17e-11 65.1
Msa0028050 MtrunA17_Chr4g0017411 21.396 444 312 12 20 455 20 434 6.05e-11 64.7
Msa0028050 MtrunA17_Chr3g0086661 24.713 174 126 3 296 466 299 470 8.85e-11 64.3
Msa0028050 MtrunA17_Chr1g0205361 23.314 519 342 21 3 496 5 492 8.96e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0028050 AT5G63450.1 45.365 507 264 8 1 499 1 502 5.29e-145 426
Msa0028050 AT5G63450.2 45.365 507 264 8 1 499 59 560 2.48e-144 426
Msa0028050 AT3G48520.1 45.800 500 261 7 6 499 4 499 1.56e-143 422
Msa0028050 AT3G56630.1 45.359 474 240 8 37 499 33 498 5.23e-139 410
Msa0028050 AT1G34540.1 44.093 474 245 8 37 499 33 497 2.87e-135 400
Msa0028050 AT2G27690.1 44.323 458 236 6 50 499 48 494 1.21e-129 386
Msa0028050 AT3G01900.1 42.918 473 254 8 32 499 29 490 2.50e-128 383
Msa0028050 AT5G08250.2 40.262 534 264 17 4 499 24 540 2.86e-116 353
Msa0028050 AT4G00360.1 40.041 492 262 12 33 499 28 511 1.29e-115 352
Msa0028050 AT5G08250.1 41.141 491 244 14 38 499 4 478 2.25e-115 349
Msa0028050 AT2G45970.1 38.050 523 289 13 4 502 2 513 6.63e-114 347
Msa0028050 AT1G24540.1 39.208 505 271 10 20 499 27 520 3.59e-113 345
Msa0028050 AT5G23190.1 39.645 507 268 15 19 499 46 540 6.39e-112 343
Msa0028050 AT1G63710.1 38.664 494 268 12 33 502 28 510 2.47e-111 340
Msa0028050 AT1G01600.1 39.192 495 264 13 33 499 28 513 6.02e-110 337
Msa0028050 AT5G58860.1 38.259 494 258 12 35 499 33 508 8.55e-104 320
Msa0028050 AT1G13140.1 38.507 509 270 15 20 499 30 524 3.37e-101 314
Msa0028050 AT3G26125.1 38.755 498 261 12 35 499 46 532 5.10e-100 311
Msa0028050 AT1G13150.1 36.566 495 278 11 30 499 34 517 2.03e-98 307
Msa0028050 AT1G69500.1 37.864 515 252 15 7 470 1 498 2.41e-98 306
Msa0028050 AT1G13140.2 37.205 508 252 15 20 499 30 498 3.59e-94 295
Msa0028050 AT2G21910.1 33.537 492 295 12 29 499 26 506 2.04e-93 293
Msa0028050 AT1G65340.1 34.335 466 281 10 29 478 28 484 2.08e-90 285
Msa0028050 AT4G39490.1 32.703 529 308 11 6 499 1 516 4.20e-90 285
Msa0028050 AT1G47620.1 34.156 527 307 13 4 504 8 520 4.32e-90 285
Msa0028050 AT2G44890.1 36.628 516 282 17 4 491 2 500 4.32e-90 285
Msa0028050 AT2G45510.1 35.490 510 285 14 5 492 14 501 2.14e-89 283
Msa0028050 AT2G44890.2 35.922 515 271 16 4 492 2 483 5.63e-88 279
Msa0028050 AT4G39480.1 33.714 525 311 12 5 502 2 516 8.95e-87 276
Msa0028050 AT2G23180.1 32.824 524 305 15 4 499 8 512 2.52e-86 275
Msa0028050 AT4G32170.1 33.268 511 312 12 7 499 4 503 3.42e-85 272
Msa0028050 AT5G52320.1 32.298 483 305 9 29 498 28 501 4.06e-85 271
Msa0028050 AT1G57750.1 33.399 509 305 14 7 500 8 497 5.61e-85 271
Msa0028050 AT5G52320.2 32.759 464 290 9 29 479 28 482 1.56e-84 270
Msa0028050 AT4G39500.2 33.140 516 309 13 7 499 14 516 1.57e-83 268
Msa0028050 AT4G39510.1 32.359 513 316 11 7 499 4 505 1.05e-82 265
Msa0028050 AT4G39500.1 34.183 471 275 12 51 499 9 466 6.20e-80 257
Msa0028050 AT1G57750.2 32.944 428 265 9 7 422 8 425 1.29e-72 237
Msa0028050 AT5G02900.1 30.390 487 277 12 6 468 1 449 1.06e-68 228
Msa0028050 AT3G53130.1 25.897 390 258 12 81 454 122 496 3.21e-28 118
Msa0028050 AT2G46660.1 23.629 474 334 17 35 499 74 528 1.19e-24 107
Msa0028050 AT3G48300.1 26.350 463 288 19 26 466 19 450 1.76e-24 106
Msa0028050 AT3G48300.2 26.350 463 288 19 26 466 21 452 1.79e-24 106
Msa0028050 AT1G31800.1 25.735 408 269 16 76 466 147 537 4.42e-24 106
Msa0028050 AT3G14640.1 23.251 443 264 16 80 484 105 509 5.99e-23 102
Msa0028050 AT3G14640.2 23.251 443 264 16 80 484 127 531 6.08e-23 102
Msa0028050 AT5G24900.1 26.055 403 256 13 85 466 115 496 2.20e-22 100
Msa0028050 AT4G13290.1 25.891 421 282 14 35 447 37 435 4.75e-22 99.4
Msa0028050 AT5G24900.2 26.173 405 247 14 88 466 1 379 5.33e-22 98.6
Msa0028050 AT4G13310.1 26.196 439 288 19 23 447 26 442 3.38e-21 97.1
Msa0028050 AT3G14620.1 23.666 431 284 15 52 466 83 484 3.88e-21 97.1
Msa0028050 AT5G52400.1 23.421 380 256 11 100 468 135 490 2.03e-20 94.7
Msa0028050 AT2G26710.1 26.098 410 256 11 76 466 103 484 2.09e-20 94.7
Msa0028050 AT2G46950.1 23.013 478 315 13 35 497 129 568 2.92e-20 94.4
Msa0028050 AT3G14680.1 24.664 446 261 17 76 484 100 507 3.84e-20 94.0
Msa0028050 AT1G01190.1 22.601 469 324 14 19 473 61 504 4.46e-20 94.0
Msa0028050 AT1G01190.2 22.601 469 324 14 19 473 66 509 4.71e-20 93.6
Msa0028050 AT4G27710.1 23.800 479 310 17 35 496 74 514 5.64e-20 93.2
Msa0028050 AT5G24910.1 23.704 405 264 11 85 466 119 501 8.59e-20 92.8
Msa0028050 AT3G48280.1 25.055 455 300 18 6 445 3 431 1.36e-19 92.0
Msa0028050 AT3G48310.1 24.537 432 287 16 26 445 28 432 1.71e-19 91.7
Msa0028050 AT3G61880.1 21.663 457 338 13 25 474 60 503 1.47e-18 89.0
Msa0028050 AT3G48270.1 22.727 462 301 18 25 466 27 452 1.58e-18 89.0
Msa0028050 AT3G61880.2 21.663 457 338 13 25 474 60 503 2.41e-18 88.6
Msa0028050 AT3G14630.1 23.380 432 267 17 61 466 84 477 2.81e-18 88.2
Msa0028050 AT3G14630.2 23.380 432 267 17 61 466 139 532 2.95e-18 88.2
Msa0028050 AT5G36110.1 28.139 231 148 5 244 467 227 446 3.27e-18 87.8
Msa0028050 AT4G13770.1 23.718 468 315 17 4 451 3 448 6.49e-18 87.0
Msa0028050 AT3G14660.1 23.874 444 266 16 53 466 80 481 8.11e-18 86.7
Msa0028050 AT3G61040.1 30.213 235 144 7 245 466 233 460 1.03e-17 86.3
Msa0028050 AT3G14690.1 25.581 430 233 18 76 466 100 481 1.05e-17 86.3
Msa0028050 AT5G24950.1 24.615 455 290 17 35 466 36 460 1.12e-17 86.3
Msa0028050 AT3G14690.2 26.303 422 240 17 76 466 135 516 1.14e-17 86.3
Msa0028050 AT5G42590.1 25.364 481 313 16 1 459 1 457 8.23e-17 83.6
Msa0028050 AT3G14660.2 27.917 240 143 9 243 466 110 335 2.64e-16 80.9
Msa0028050 AT2G42850.1 27.542 236 143 7 226 451 221 438 4.79e-16 81.3
Msa0028050 AT5G05260.2 21.660 494 332 18 6 461 11 487 5.66e-16 80.9
Msa0028050 AT1G64930.1 26.776 183 127 3 289 467 297 476 1.05e-15 80.1
Msa0028050 AT3G28740.1 24.928 345 216 12 123 451 131 448 1.29e-15 79.7
Msa0028050 AT2G46960.2 21.578 431 303 11 81 497 106 515 1.58e-15 79.7
Msa0028050 AT3G25180.1 25.188 266 178 7 223 477 229 484 2.20e-15 79.0
Msa0028050 AT2G46960.1 22.785 395 270 11 117 497 26 399 3.12e-15 78.2
Msa0028050 AT4G37320.1 21.169 496 297 14 3 459 4 444 3.41e-15 78.6
Msa0028050 AT5G38450.1 23.243 370 245 9 113 466 139 485 4.15e-15 78.2
Msa0028050 AT2G42250.1 29.891 184 115 6 290 466 301 477 4.30e-15 78.2
Msa0028050 AT1G64940.1 28.804 184 118 4 289 466 299 475 5.46e-15 77.8
Msa0028050 AT3G26210.1 23.990 396 253 18 81 451 77 449 6.64e-15 77.4
Msa0028050 AT3G48320.1 25.427 468 290 21 1 445 1 432 1.72e-14 76.3
Msa0028050 AT1G67110.1 22.251 391 266 9 88 466 115 479 1.91e-14 76.3
Msa0028050 AT4G39950.1 22.880 507 318 21 2 461 17 497 2.33e-14 75.9
Msa0028050 AT2G30770.1 21.946 442 289 16 35 452 37 446 2.66e-14 75.9
Msa0028050 AT4G39950.2 22.880 507 318 21 2 461 57 537 2.99e-14 75.9
Msa0028050 AT1G13710.1 22.674 516 331 21 4 489 19 496 3.96e-14 75.1
Msa0028050 AT1G11600.1 23.853 218 162 2 285 499 293 509 4.14e-14 75.1
Msa0028050 AT3G26230.1 21.714 525 343 16 7 496 1 492 5.10e-14 74.7
Msa0028050 AT3G26280.1 22.958 453 312 16 19 451 17 452 5.41e-14 74.7
Msa0028050 AT3G26280.2 22.958 453 312 16 19 451 34 469 5.54e-14 74.7
Msa0028050 AT3G48290.1 28.736 174 116 4 296 466 286 454 6.95e-14 74.3
Msa0028050 AT1G64950.1 27.473 182 123 3 289 466 298 474 1.09e-13 73.9
Msa0028050 AT5G57260.1 21.219 443 306 15 24 445 23 443 1.48e-13 73.6
Msa0028050 AT1G13080.1 22.474 485 324 17 6 466 9 465 2.94e-13 72.4
Msa0028050 AT3G48290.2 29.878 164 107 4 306 466 322 480 3.97e-13 72.0
Msa0028050 AT5G05260.1 21.311 488 309 19 6 461 11 455 4.64e-13 71.6
Msa0028050 AT2G25160.1 26.877 253 155 9 233 466 238 479 5.41e-13 71.6
Msa0028050 AT3G03470.1 22.936 218 159 3 290 499 293 509 1.19e-12 70.5
Msa0028050 AT2G45550.1 24.180 244 165 7 236 466 235 471 1.98e-12 69.7
Msa0028050 AT3G26300.1 21.225 457 321 13 6 445 6 440 2.61e-12 69.3
Msa0028050 AT5G57220.1 21.909 461 316 15 16 459 14 447 2.65e-12 69.3
Msa0028050 AT2G22330.1 22.133 497 335 20 1 461 19 499 2.99e-12 69.3
Msa0028050 AT2G22330.2 22.133 497 335 20 1 461 42 522 3.70e-12 69.3
Msa0028050 AT1G73340.1 20.302 463 308 17 12 455 20 440 3.76e-12 68.9
Msa0028050 AT2G12190.1 25.824 182 128 3 289 466 298 476 5.13e-12 68.6
Msa0028050 AT4G37430.1 23.142 471 318 18 10 459 9 456 5.32e-12 68.6
Msa0028050 AT3G26310.1 22.026 454 313 17 10 445 9 439 6.24e-12 68.2
Msa0028050 AT5G36220.1 21.193 486 303 16 4 451 3 446 1.02e-11 67.8
Msa0028050 AT2G45570.1 28.016 257 152 12 228 466 231 472 1.09e-11 67.4
Msa0028050 AT1G11680.1 23.396 265 189 6 212 468 198 456 1.10e-11 67.4
Msa0028050 AT2G23190.1 23.093 485 317 18 1 463 45 495 1.16e-11 67.4
Msa0028050 AT4G31940.1 23.574 263 177 9 240 485 248 503 1.25e-11 67.4
Msa0028050 AT2G29090.3 28.947 190 115 5 285 467 182 358 1.35e-11 66.6
Msa0028050 AT1G66540.2 25.112 223 146 6 242 459 66 272 1.42e-11 66.2
Msa0028050 AT5G06905.1 23.197 513 318 21 5 474 4 483 1.82e-11 67.0
Msa0028050 AT1G66540.1 25.112 223 146 6 242 459 125 331 1.88e-11 66.2
Msa0028050 AT2G29090.2 28.571 217 125 6 285 494 277 470 2.73e-11 66.2
Msa0028050 AT2G29090.1 28.571 217 125 6 285 494 277 470 2.73e-11 66.2
Msa0028050 AT4G15360.1 21.522 460 326 15 9 451 16 457 2.88e-11 66.2
Msa0028050 AT4G37400.1 22.004 459 316 15 19 459 19 453 3.79e-11 65.9
Msa0028050 AT5G24960.1 24.009 454 294 19 24 455 28 452 4.26e-11 65.5
Msa0028050 AT3G10560.1 20.350 457 311 16 35 466 50 478 5.24e-11 65.5
Msa0028050 AT3G20950.1 20.998 481 331 16 11 465 20 477 5.54e-11 65.5
Msa0028050 AT3G44250.1 21.749 423 296 13 45 447 35 442 8.56e-11 64.7
Msa0028050 AT4G31970.1 24.257 202 145 5 280 477 297 494 9.09e-11 64.7

Find 127 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGTAAGAGTTGGGGATTT+TGG 0.234132 1_1:-52770254 None:intergenic
TTGGCATTATGAGGGAGTTT+AGG 0.239922 1_1:+52771538 Msa0028050:CDS
TGGGAAGATCTGAGAAAATA+TGG 0.241338 1_1:+52771349 Msa0028050:CDS
CGATCCCTCTTCGAGTTTCT+AGG 0.256251 1_1:+52770481 Msa0028050:CDS
CTGCACTCACGTGGTTCTTT+TGG 0.262457 1_1:+52771088 Msa0028050:CDS
ACGCTGCTATTCCATTTCTA+TGG 0.266706 1_1:+52770830 Msa0028050:CDS
ATGCGCTTCTCGATCTTTAC+TGG 0.273322 1_1:-52771636 None:intergenic
TGGCATTATGAGGGAGTTTA+GGG 0.295858 1_1:+52771539 Msa0028050:CDS
GTGATAAGCTTTATTCTTGC+TGG 0.302739 1_1:+52771048 Msa0028050:CDS
TGGAGAATATCTTGAAAATC+AGG 0.314859 1_1:-52770676 None:intergenic
CTACCGTTTCAACGAATTTA+CGG 0.327101 1_1:-52770585 None:intergenic
TTACGATGAGGTGAAGGATA+TGG 0.331983 1_1:+52771182 Msa0028050:CDS
CTGGGCCGAGGGTGTGTTTA+GGG 0.335396 1_1:+52771478 Msa0028050:CDS
GTCGAGCTGACGATGGAAAA+TGG 0.339965 1_1:+52771412 Msa0028050:CDS
GCTGGGCCGAGGGTGTGTTT+AGG 0.340311 1_1:+52771477 Msa0028050:CDS
AATATTTGCATAATCGCGTT+TGG 0.357467 1_1:+52770715 Msa0028050:CDS
CACCTTTCATTATTGAAGTA+AGG 0.357913 1_1:-52771608 None:intergenic
GAAAATCAGGGAGGATCATT+TGG 0.367747 1_1:-52770663 None:intergenic
GGTTGGTTGTTGGCATTATG+AGG 0.376144 1_1:+52771529 Msa0028050:CDS
TCCTTAGCATCCACCGGAAC+TGG 0.383720 1_1:-52771249 None:intergenic
AGAAAATATGGGGATCTGAT+TGG 0.384146 1_1:+52771361 Msa0028050:CDS
AGGAGCCGAAGGGGCGGTGG+AGG 0.391442 1_1:-52770372 None:intergenic
AATGGATCCTTATACTTATC+CGG 0.392782 1_1:+52771446 Msa0028050:CDS
CCCAACTCTTACCCTATCAT+TGG 0.404551 1_1:+52770262 Msa0028050:CDS
TAATAAAGAAACCAATGTTT+CGG 0.419293 1_1:-52770167 None:intergenic
GATGGAAAATGGAGCTTTGT+TGG 0.421609 1_1:+52771423 Msa0028050:CDS
GTCGCTCGGTTCCAATGTTT+AGG 0.423710 1_1:-52770867 None:intergenic
AGCAGGAGCCGAAGGGGCGG+TGG 0.424339 1_1:-52770375 None:intergenic
TTCTTCACTAATGTTCCATC+TGG 0.425736 1_1:-52771294 None:intergenic
GGAAACACAGAACCAATGAT+AGG 0.426161 1_1:-52770274 None:intergenic
TTTGTCCTCCACCGCCCCTT+CGG 0.430781 1_1:+52770367 Msa0028050:CDS
CCAATGATAGGGTAAGAGTT+GGG 0.431539 1_1:-52770262 None:intergenic
TTGGAAGCTTCATGGAGAAT+AGG 0.435384 1_1:-52770637 None:intergenic
GGCTTCTTTCAACCGTCGCT+CGG 0.437548 1_1:-52770881 None:intergenic
AGAATATGTTGCACCACAGC+GGG 0.452207 1_1:-52770415 None:intergenic
GAAAATATGGGGATCTGATT+GGG 0.452783 1_1:+52771362 Msa0028050:CDS
GAGATTGTATCCTCCAGTTC+CGG 0.463299 1_1:+52771236 Msa0028050:CDS
GGGAAGATCTGAGAAAATAT+GGG 0.464498 1_1:+52771350 Msa0028050:CDS
TGGAAGAAGGTATAGTTTGA+AGG 0.466549 1_1:-52770342 None:intergenic
TGATAAGCTTTATTCTTGCT+GGG 0.466948 1_1:+52771049 Msa0028050:CDS
TGCGTATCATGTATATGCTA+TGG 0.467152 1_1:+52771329 Msa0028050:CDS
GGGATTTAGTGTTGAATTCA+CGG 0.467419 1_1:-52770561 None:intergenic
GTGCTTCCAGCGATGGATGA+AGG 0.478116 1_1:+52771561 Msa0028050:CDS
GATGGAACATTAGTGAAGAA+AGG 0.482838 1_1:+52771297 Msa0028050:CDS
CAGATGAAGAGGTTGGTTGT+TGG 0.484411 1_1:+52771519 Msa0028050:CDS
GTTTAGGGTGCTTCCAGCGA+TGG 0.488226 1_1:+52771554 Msa0028050:CDS
CGGTGAAAGTTGGCTGCAAT+GGG 0.488934 1_1:-52770295 None:intergenic
AACGCGATTTCGGGAAGAGA+AGG 0.492615 1_1:-52770760 None:intergenic
GAAGCCGTCGCTGAAGTAAG+AGG 0.493725 1_1:+52770898 Msa0028050:CDS
ACTTTCACCGTCTCATACAA+TGG 0.494854 1_1:+52770308 Msa0028050:CDS
GCTCGACTCAACCACCTCTC+AGG 0.503978 1_1:-52771396 None:intergenic
AAAATGGAGCTTTGTTGGAA+TGG 0.504854 1_1:+52771428 Msa0028050:CDS
ACGGTGAAAGTTGGCTGCAA+TGG 0.508690 1_1:-52770296 None:intergenic
CAAAATATCCACCGATTCCA+AGG 0.513937 1_1:-52770974 None:intergenic
TGCTTCCAGCGATGGATGAA+GGG 0.514603 1_1:+52771562 Msa0028050:CDS
TCCAGTTCCGGTGGATGCTA+AGG 0.515569 1_1:+52771248 Msa0028050:CDS
TCAACACTGACGGTGAAAGT+TGG 0.517905 1_1:+52770515 Msa0028050:CDS
TCTTTCCCTAAACACACCCT+CGG 0.519430 1_1:-52771483 None:intergenic
TTTGTTGTAGCAAGGGAAGT+TGG 0.522871 1_1:-52770443 None:intergenic
GTTGGTTGTTGGCATTATGA+GGG 0.525161 1_1:+52771530 Msa0028050:CDS
CTCTTCGAGTTTCTAGGTAA+CGG 0.528060 1_1:+52770487 Msa0028050:CDS
AGAAAAGACAGCCTTGGAAT+CGG 0.532232 1_1:+52770963 Msa0028050:CDS
ATGGAACATTAGTGAAGAAA+GGG 0.533849 1_1:+52771298 Msa0028050:CDS
CCTCCGTAAATTCGTTGAAA+CGG 0.535085 1_1:+52770582 Msa0028050:CDS
CACCTTACTTCAATAATGAA+AGG 0.538300 1_1:+52771606 Msa0028050:CDS
GCTTGAAGAAAAGACAGCCT+TGG 0.539857 1_1:+52770957 Msa0028050:CDS
GATGACTGAGCAGGAGCCGA+AGG 0.540330 1_1:-52770383 None:intergenic
ACCAATGATAGGGTAAGAGT+TGG 0.543526 1_1:-52770263 None:intergenic
GCGTATCATGTATATGCTAT+GGG 0.544791 1_1:+52771330 Msa0028050:CDS
AAGAGGGATCGATGAAATGT+AGG 0.546407 1_1:-52770469 None:intergenic
TAAATTCGTTGAAACGGTAG+TGG 0.547569 1_1:+52770588 Msa0028050:CDS
TTTAGTGTTGAATTCACGGC+TGG 0.547993 1_1:-52770557 None:intergenic
GTAGGACCTTTGTTGTAGCA+AGG 0.550558 1_1:-52770451 None:intergenic
GAGAATATGTTGCACCACAG+CGG 0.556115 1_1:-52770416 None:intergenic
TGGAGGACAAAGGTGGAAGA+AGG 0.556513 1_1:-52770355 None:intergenic
GGGGCGGTGGAGGACAAAGG+TGG 0.561092 1_1:-52770362 None:intergenic
TAGGACCTTTGTTGTAGCAA+GGG 0.561102 1_1:-52770450 None:intergenic
GAAGGGGCGGTGGAGGACAA+AGG 0.561542 1_1:-52770365 None:intergenic
GTAAGGTGTGAATCAAACTC+TGG 0.564216 1_1:-52771591 None:intergenic
ACGCGATTTCGGGAAGAGAA+GGG 0.564509 1_1:-52770759 None:intergenic
CCAAATGGAATCCGAAACAT+TGG 0.566183 1_1:+52770156 None:intergenic
TCAACCCCTTCATCCATCGC+TGG 0.566996 1_1:-52771567 None:intergenic
GTTTGCCGTGATGACTGAGC+AGG 0.568615 1_1:-52770392 None:intergenic
GTTCTTACAGATGAAGAGGT+TGG 0.568740 1_1:+52771512 Msa0028050:CDS
AGTTAGTTACGATGAGGTGA+AGG 0.569800 1_1:+52771176 Msa0028050:CDS
AACTTCCCTTGCTACAACAA+AGG 0.571997 1_1:+52770445 Msa0028050:CDS
TGGCGTTCTTACAGATGAAG+AGG 0.573982 1_1:+52771508 Msa0028050:CDS
GAACATTAGTGAAGAAAGGG+TGG 0.574370 1_1:+52771301 Msa0028050:CDS
AATCGCGTTTGGATTCGATC+CGG 0.575283 1_1:+52770726 Msa0028050:CDS
GGAGAATATCTTGAAAATCA+GGG 0.581457 1_1:-52770675 None:intergenic
CAATGATAGGGTAAGAGTTG+GGG 0.582821 1_1:-52770261 None:intergenic
TATTATCAAACGTAAAACGT+TGG 0.585019 1_1:-52770696 None:intergenic
GCTGCTTCCTTAGCATCCAC+CGG 0.586560 1_1:-52771255 None:intergenic
CTGAGCAGGAGCCGAAGGGG+CGG 0.594123 1_1:-52770378 None:intergenic
GAAACACAGAACCAATGATA+GGG 0.598974 1_1:-52770273 None:intergenic
AGAGAAGGGAGGAGATACTC+CGG 0.603307 1_1:-52770745 None:intergenic
TAAACATTGGAACCGAGCGA+CGG 0.603550 1_1:+52770869 Msa0028050:CDS
CACTGACGGTGAAAGTTGGA+AGG 0.604210 1_1:+52770519 Msa0028050:CDS
AAAGACAGCCTTGGAATCGG+TGG 0.606382 1_1:+52770966 Msa0028050:CDS
AACGGTATCTTCAACACTGA+CGG 0.607723 1_1:+52770505 Msa0028050:CDS
GGTGTGTTTAGGGAAAGAAA+TGG 0.608381 1_1:+52771488 Msa0028050:CDS
ATGACTGAGCAGGAGCCGAA+GGG 0.610143 1_1:-52770382 None:intergenic
CTTACTTCAATAATGAAAGG+TGG 0.615026 1_1:+52771609 Msa0028050:CDS
CAGAAATCCATTGTATGAGA+CGG 0.615460 1_1:-52770315 None:intergenic
ATTGTATCCTCCAGTTCCGG+TGG 0.618690 1_1:+52771239 Msa0028050:CDS
CAACTTCAGCTGCACTCACG+TGG 0.619047 1_1:+52771079 Msa0028050:CDS
GTTACCTAGAAACTCGAAGA+GGG 0.622020 1_1:-52770485 None:intergenic
AAGTCCTCTTACTTCAGCGA+CGG 0.623282 1_1:-52770902 None:intergenic
TTAGCATCCACCGGAACTGG+AGG 0.629977 1_1:-52771246 None:intergenic
GCTTCCAGCGATGGATGAAG+GGG 0.630676 1_1:+52771563 Msa0028050:CDS
CGGCTCCTGCTCAGTCATCA+CGG 0.633141 1_1:+52770387 Msa0028050:CDS
TGGTTGAGTCGAGCTGACGA+TGG 0.638987 1_1:+52771405 Msa0028050:CDS
CGTTTCAACGAATTTACGGA+GGG 0.644582 1_1:-52770581 None:intergenic
ATCTGGCAAAACATCATCGT+AGG 0.646289 1_1:-52771277 None:intergenic
CCGTTTCAACGAATTTACGG+AGG 0.647053 1_1:-52770582 None:intergenic
TTGTATGAGACGGTGAAAGT+TGG 0.647696 1_1:-52770305 None:intergenic
TGACTGAGCAGGAGCCGAAG+GGG 0.648695 1_1:-52770381 None:intergenic
CTGAGTTTCGACCTGAGAGG+TGG 0.648894 1_1:+52771385 Msa0028050:CDS
GGAAGATCTGAGAAAATATG+GGG 0.663149 1_1:+52771351 Msa0028050:CDS
GGGCTGAGTTTCGACCTGAG+AGG 0.665153 1_1:+52771382 Msa0028050:CDS
AATGATAGTTAGTTACGATG+AGG 0.669710 1_1:+52771170 Msa0028050:CDS
CGTTACCTAGAAACTCGAAG+AGG 0.684043 1_1:-52770486 None:intergenic
CATCACGGCAAACCCCGCTG+TGG 0.695766 1_1:+52770402 Msa0028050:CDS
CGATTTCGGGAAGAGAAGGG+AGG 0.696110 1_1:-52770756 None:intergenic
GCACACGAATCAGCAGCGAG+AGG 0.705897 1_1:+52770803 Msa0028050:CDS
GAATATGTTGCACCACAGCG+GGG 0.724576 1_1:-52770414 None:intergenic
GAATATCTTGAAAATCAGGG+AGG 0.746007 1_1:-52770672 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAAGAAACCAATGTTT+CGG - chr1_1:52770170-52770189 None:intergenic 20.0%
!! TAATAAAGAAACCAATGTTT+CGG - chr1_1:52770170-52770189 None:intergenic 20.0%
! TATTATCAAACGTAAAACGT+TGG - chr1_1:52770699-52770718 None:intergenic 25.0%
!! TTTTTCACTTTCCATAGAAA+TGG - chr1_1:52770844-52770863 None:intergenic 25.0%
! GTGAAAAAATTCCTAAACAT+TGG + chr1_1:52770856-52770875 Msa0028050:CDS 25.0%
! TATTATCAAACGTAAAACGT+TGG - chr1_1:52770699-52770718 None:intergenic 25.0%
!! TTTTTCACTTTCCATAGAAA+TGG - chr1_1:52770844-52770863 None:intergenic 25.0%
! GTGAAAAAATTCCTAAACAT+TGG + chr1_1:52770856-52770875 Msa0028050:CDS 25.0%
!!! TGTTTTGGATCGTTTTTTTG+TGG - chr1_1:52770230-52770249 None:intergenic 30.0%
GGAGAATATCTTGAAAATCA+GGG - chr1_1:52770678-52770697 None:intergenic 30.0%
TGGAGAATATCTTGAAAATC+AGG - chr1_1:52770679-52770698 None:intergenic 30.0%
AATATTTGCATAATCGCGTT+TGG + chr1_1:52770715-52770734 Msa0028050:CDS 30.0%
ACTTGCCACAAAAATTGTTA+GGG + chr1_1:52770921-52770940 Msa0028050:CDS 30.0%
! CTTTTCCCTAACAATTTTTG+TGG - chr1_1:52770929-52770948 None:intergenic 30.0%
!! TGATAAGCTTTATTCTTGCT+GGG + chr1_1:52771049-52771068 Msa0028050:CDS 30.0%
AATGATAGTTAGTTACGATG+AGG + chr1_1:52771170-52771189 Msa0028050:CDS 30.0%
ATGGAACATTAGTGAAGAAA+GGG + chr1_1:52771298-52771317 Msa0028050:CDS 30.0%
AATGGATCCTTATACTTATC+CGG + chr1_1:52771446-52771465 Msa0028050:CDS 30.0%
TGAAAAACCGGATAAGTATA+AGG - chr1_1:52771456-52771475 None:intergenic 30.0%
CACCTTACTTCAATAATGAA+AGG + chr1_1:52771606-52771625 Msa0028050:CDS 30.0%
CACCTTTCATTATTGAAGTA+AGG - chr1_1:52771611-52771630 None:intergenic 30.0%
CTTACTTCAATAATGAAAGG+TGG + chr1_1:52771609-52771628 Msa0028050:CDS 30.0%
!!! TGTTTTGGATCGTTTTTTTG+TGG - chr1_1:52770230-52770249 None:intergenic 30.0%
GGAGAATATCTTGAAAATCA+GGG - chr1_1:52770678-52770697 None:intergenic 30.0%
TGGAGAATATCTTGAAAATC+AGG - chr1_1:52770679-52770698 None:intergenic 30.0%
AATATTTGCATAATCGCGTT+TGG + chr1_1:52770715-52770734 Msa0028050:CDS 30.0%
ACTTGCCACAAAAATTGTTA+GGG + chr1_1:52770921-52770940 Msa0028050:CDS 30.0%
! CTTTTCCCTAACAATTTTTG+TGG - chr1_1:52770929-52770948 None:intergenic 30.0%
!! TGATAAGCTTTATTCTTGCT+GGG + chr1_1:52771049-52771068 Msa0028050:CDS 30.0%
AATGATAGTTAGTTACGATG+AGG + chr1_1:52771170-52771189 Msa0028050:CDS 30.0%
ATGGAACATTAGTGAAGAAA+GGG + chr1_1:52771298-52771317 Msa0028050:CDS 30.0%
AATGGATCCTTATACTTATC+CGG + chr1_1:52771446-52771465 Msa0028050:CDS 30.0%
TGAAAAACCGGATAAGTATA+AGG - chr1_1:52771456-52771475 None:intergenic 30.0%
CACCTTACTTCAATAATGAA+AGG + chr1_1:52771606-52771625 Msa0028050:CDS 30.0%
CACCTTTCATTATTGAAGTA+AGG - chr1_1:52771611-52771630 None:intergenic 30.0%
CTTACTTCAATAATGAAAGG+TGG + chr1_1:52771609-52771628 Msa0028050:CDS 30.0%
GAAACACAGAACCAATGATA+GGG - chr1_1:52770276-52770295 None:intergenic 35.0%
CAGAAATCCATTGTATGAGA+CGG - chr1_1:52770318-52770337 None:intergenic 35.0%
! TGGAAGAAGGTATAGTTTGA+AGG - chr1_1:52770345-52770364 None:intergenic 35.0%
! GGGATTTAGTGTTGAATTCA+CGG - chr1_1:52770564-52770583 None:intergenic 35.0%
CTACCGTTTCAACGAATTTA+CGG - chr1_1:52770588-52770607 None:intergenic 35.0%
TAAATTCGTTGAAACGGTAG+TGG + chr1_1:52770588-52770607 Msa0028050:CDS 35.0%
!!! TTTGGTTTTTGGAAGCTTCA+TGG - chr1_1:52770648-52770667 None:intergenic 35.0%
GAATATCTTGAAAATCAGGG+AGG - chr1_1:52770675-52770694 None:intergenic 35.0%
! AGCTTTTACAAACGCGATTT+CGG - chr1_1:52770773-52770792 None:intergenic 35.0%
GACTTGCCACAAAAATTGTT+AGG + chr1_1:52770920-52770939 Msa0028050:CDS 35.0%
!!! TTGTCGCGATTTTTAAGTTC+TGG + chr1_1:52770994-52771013 Msa0028050:CDS 35.0%
!! GTGATAAGCTTTATTCTTGC+TGG + chr1_1:52771048-52771067 Msa0028050:CDS 35.0%
TTCTTCACTAATGTTCCATC+TGG - chr1_1:52771297-52771316 None:intergenic 35.0%
GATGGAACATTAGTGAAGAA+AGG + chr1_1:52771297-52771316 Msa0028050:CDS 35.0%
TGCGTATCATGTATATGCTA+TGG + chr1_1:52771329-52771348 Msa0028050:CDS 35.0%
GCGTATCATGTATATGCTAT+GGG + chr1_1:52771330-52771349 Msa0028050:CDS 35.0%
TGGGAAGATCTGAGAAAATA+TGG + chr1_1:52771349-52771368 Msa0028050:CDS 35.0%
GGGAAGATCTGAGAAAATAT+GGG + chr1_1:52771350-52771369 Msa0028050:CDS 35.0%
GGAAGATCTGAGAAAATATG+GGG + chr1_1:52771351-52771370 Msa0028050:CDS 35.0%
AGAAAATATGGGGATCTGAT+TGG + chr1_1:52771361-52771380 Msa0028050:CDS 35.0%
GAAAATATGGGGATCTGATT+GGG + chr1_1:52771362-52771381 Msa0028050:CDS 35.0%
!! AAAATGGAGCTTTGTTGGAA+TGG + chr1_1:52771428-52771447 Msa0028050:CDS 35.0%
GAAACACAGAACCAATGATA+GGG - chr1_1:52770276-52770295 None:intergenic 35.0%
CAGAAATCCATTGTATGAGA+CGG - chr1_1:52770318-52770337 None:intergenic 35.0%
! TGGAAGAAGGTATAGTTTGA+AGG - chr1_1:52770345-52770364 None:intergenic 35.0%
! GGGATTTAGTGTTGAATTCA+CGG - chr1_1:52770564-52770583 None:intergenic 35.0%
CTACCGTTTCAACGAATTTA+CGG - chr1_1:52770588-52770607 None:intergenic 35.0%
TAAATTCGTTGAAACGGTAG+TGG + chr1_1:52770588-52770607 Msa0028050:CDS 35.0%
!!! TTTGGTTTTTGGAAGCTTCA+TGG - chr1_1:52770648-52770667 None:intergenic 35.0%
GAATATCTTGAAAATCAGGG+AGG - chr1_1:52770675-52770694 None:intergenic 35.0%
! AGCTTTTACAAACGCGATTT+CGG - chr1_1:52770773-52770792 None:intergenic 35.0%
GACTTGCCACAAAAATTGTT+AGG + chr1_1:52770920-52770939 Msa0028050:CDS 35.0%
!!! TTGTCGCGATTTTTAAGTTC+TGG + chr1_1:52770994-52771013 Msa0028050:CDS 35.0%
!! GTGATAAGCTTTATTCTTGC+TGG + chr1_1:52771048-52771067 Msa0028050:CDS 35.0%
TTCTTCACTAATGTTCCATC+TGG - chr1_1:52771297-52771316 None:intergenic 35.0%
GATGGAACATTAGTGAAGAA+AGG + chr1_1:52771297-52771316 Msa0028050:CDS 35.0%
TGCGTATCATGTATATGCTA+TGG + chr1_1:52771329-52771348 Msa0028050:CDS 35.0%
GCGTATCATGTATATGCTAT+GGG + chr1_1:52771330-52771349 Msa0028050:CDS 35.0%
TGGGAAGATCTGAGAAAATA+TGG + chr1_1:52771349-52771368 Msa0028050:CDS 35.0%
GGGAAGATCTGAGAAAATAT+GGG + chr1_1:52771350-52771369 Msa0028050:CDS 35.0%
GGAAGATCTGAGAAAATATG+GGG + chr1_1:52771351-52771370 Msa0028050:CDS 35.0%
AGAAAATATGGGGATCTGAT+TGG + chr1_1:52771361-52771380 Msa0028050:CDS 35.0%
GAAAATATGGGGATCTGATT+GGG + chr1_1:52771362-52771381 Msa0028050:CDS 35.0%
!! AAAATGGAGCTTTGTTGGAA+TGG + chr1_1:52771428-52771447 Msa0028050:CDS 35.0%
! TAAGAGTTGGGGATTTTGGA+GGG - chr1_1:52770253-52770272 None:intergenic 40.0%
CAATGATAGGGTAAGAGTTG+GGG - chr1_1:52770264-52770283 None:intergenic 40.0%
CCAATGATAGGGTAAGAGTT+GGG - chr1_1:52770265-52770284 None:intergenic 40.0%
ACCAATGATAGGGTAAGAGT+TGG - chr1_1:52770266-52770285 None:intergenic 40.0%
GGAAACACAGAACCAATGAT+AGG - chr1_1:52770277-52770296 None:intergenic 40.0%
TTGTATGAGACGGTGAAAGT+TGG - chr1_1:52770308-52770327 None:intergenic 40.0%
ACTTTCACCGTCTCATACAA+TGG + chr1_1:52770308-52770327 Msa0028050:CDS 40.0%
! TTTGTTGTAGCAAGGGAAGT+TGG - chr1_1:52770446-52770465 None:intergenic 40.0%
AACTTCCCTTGCTACAACAA+AGG + chr1_1:52770445-52770464 Msa0028050:CDS 40.0%
! TAGGACCTTTGTTGTAGCAA+GGG - chr1_1:52770453-52770472 None:intergenic 40.0%
AAGAGGGATCGATGAAATGT+AGG - chr1_1:52770472-52770491 None:intergenic 40.0%
GTTACCTAGAAACTCGAAGA+GGG - chr1_1:52770488-52770507 None:intergenic 40.0%
! CTCTTCGAGTTTCTAGGTAA+CGG + chr1_1:52770487-52770506 Msa0028050:CDS 40.0%
AACGGTATCTTCAACACTGA+CGG + chr1_1:52770505-52770524 Msa0028050:CDS 40.0%
! TTTAGTGTTGAATTCACGGC+TGG - chr1_1:52770560-52770579 None:intergenic 40.0%
CGTTTCAACGAATTTACGGA+GGG - chr1_1:52770584-52770603 None:intergenic 40.0%
CCTCCGTAAATTCGTTGAAA+CGG + chr1_1:52770582-52770601 Msa0028050:CDS 40.0%
TTGGAAGCTTCATGGAGAAT+AGG - chr1_1:52770640-52770659 None:intergenic 40.0%
!!! AGGGAGGATCATTTGGTTTT+TGG - chr1_1:52770659-52770678 None:intergenic 40.0%
GAAAATCAGGGAGGATCATT+TGG - chr1_1:52770666-52770685 None:intergenic 40.0%
! GCTTTTACAAACGCGATTTC+GGG - chr1_1:52770772-52770791 None:intergenic 40.0%
ACGCTGCTATTCCATTTCTA+TGG + chr1_1:52770830-52770849 Msa0028050:CDS 40.0%
AGAAAAGACAGCCTTGGAAT+CGG + chr1_1:52770963-52770982 Msa0028050:CDS 40.0%
!! CAAAATATCCACCGATTCCA+AGG - chr1_1:52770977-52770996 None:intergenic 40.0%
AGTTAGTTACGATGAGGTGA+AGG + chr1_1:52771176-52771195 Msa0028050:CDS 40.0%
TTACGATGAGGTGAAGGATA+TGG + chr1_1:52771182-52771201 Msa0028050:CDS 40.0%
ATCTGGCAAAACATCATCGT+AGG - chr1_1:52771280-52771299 None:intergenic 40.0%
! TACGATGATGTTTTGCCAGA+TGG + chr1_1:52771279-52771298 Msa0028050:CDS 40.0%
GAACATTAGTGAAGAAAGGG+TGG + chr1_1:52771301-52771320 Msa0028050:CDS 40.0%
! GATGGAAAATGGAGCTTTGT+TGG + chr1_1:52771423-52771442 Msa0028050:CDS 40.0%
!!! ACTTATCCGGTTTTTCAAGC+TGG + chr1_1:52771459-52771478 Msa0028050:CDS 40.0%
!!! CTTATCCGGTTTTTCAAGCT+GGG + chr1_1:52771460-52771479 Msa0028050:CDS 40.0%
GGTGTGTTTAGGGAAAGAAA+TGG + chr1_1:52771488-52771507 Msa0028050:CDS 40.0%
GTTCTTACAGATGAAGAGGT+TGG + chr1_1:52771512-52771531 Msa0028050:CDS 40.0%
GTTGGTTGTTGGCATTATGA+GGG + chr1_1:52771530-52771549 Msa0028050:CDS 40.0%
TTGGCATTATGAGGGAGTTT+AGG + chr1_1:52771538-52771557 Msa0028050:CDS 40.0%
TGGCATTATGAGGGAGTTTA+GGG + chr1_1:52771539-52771558 Msa0028050:CDS 40.0%
GTAAGGTGTGAATCAAACTC+TGG - chr1_1:52771594-52771613 None:intergenic 40.0%
! TAAGAGTTGGGGATTTTGGA+GGG - chr1_1:52770253-52770272 None:intergenic 40.0%
CAATGATAGGGTAAGAGTTG+GGG - chr1_1:52770264-52770283 None:intergenic 40.0%
CCAATGATAGGGTAAGAGTT+GGG - chr1_1:52770265-52770284 None:intergenic 40.0%
ACCAATGATAGGGTAAGAGT+TGG - chr1_1:52770266-52770285 None:intergenic 40.0%
GGAAACACAGAACCAATGAT+AGG - chr1_1:52770277-52770296 None:intergenic 40.0%
TTGTATGAGACGGTGAAAGT+TGG - chr1_1:52770308-52770327 None:intergenic 40.0%
ACTTTCACCGTCTCATACAA+TGG + chr1_1:52770308-52770327 Msa0028050:CDS 40.0%
! TTTGTTGTAGCAAGGGAAGT+TGG - chr1_1:52770446-52770465 None:intergenic 40.0%
AACTTCCCTTGCTACAACAA+AGG + chr1_1:52770445-52770464 Msa0028050:CDS 40.0%
! TAGGACCTTTGTTGTAGCAA+GGG - chr1_1:52770453-52770472 None:intergenic 40.0%
AAGAGGGATCGATGAAATGT+AGG - chr1_1:52770472-52770491 None:intergenic 40.0%
GTTACCTAGAAACTCGAAGA+GGG - chr1_1:52770488-52770507 None:intergenic 40.0%
! CTCTTCGAGTTTCTAGGTAA+CGG + chr1_1:52770487-52770506 Msa0028050:CDS 40.0%
AACGGTATCTTCAACACTGA+CGG + chr1_1:52770505-52770524 Msa0028050:CDS 40.0%
! TTTAGTGTTGAATTCACGGC+TGG - chr1_1:52770560-52770579 None:intergenic 40.0%
CGTTTCAACGAATTTACGGA+GGG - chr1_1:52770584-52770603 None:intergenic 40.0%
CCTCCGTAAATTCGTTGAAA+CGG + chr1_1:52770582-52770601 Msa0028050:CDS 40.0%
TTGGAAGCTTCATGGAGAAT+AGG - chr1_1:52770640-52770659 None:intergenic 40.0%
!!! AGGGAGGATCATTTGGTTTT+TGG - chr1_1:52770659-52770678 None:intergenic 40.0%
GAAAATCAGGGAGGATCATT+TGG - chr1_1:52770666-52770685 None:intergenic 40.0%
! GCTTTTACAAACGCGATTTC+GGG - chr1_1:52770772-52770791 None:intergenic 40.0%
ACGCTGCTATTCCATTTCTA+TGG + chr1_1:52770830-52770849 Msa0028050:CDS 40.0%
AGAAAAGACAGCCTTGGAAT+CGG + chr1_1:52770963-52770982 Msa0028050:CDS 40.0%
!! CAAAATATCCACCGATTCCA+AGG - chr1_1:52770977-52770996 None:intergenic 40.0%
AGTTAGTTACGATGAGGTGA+AGG + chr1_1:52771176-52771195 Msa0028050:CDS 40.0%
TTACGATGAGGTGAAGGATA+TGG + chr1_1:52771182-52771201 Msa0028050:CDS 40.0%
ATCTGGCAAAACATCATCGT+AGG - chr1_1:52771280-52771299 None:intergenic 40.0%
! TACGATGATGTTTTGCCAGA+TGG + chr1_1:52771279-52771298 Msa0028050:CDS 40.0%
GAACATTAGTGAAGAAAGGG+TGG + chr1_1:52771301-52771320 Msa0028050:CDS 40.0%
! GATGGAAAATGGAGCTTTGT+TGG + chr1_1:52771423-52771442 Msa0028050:CDS 40.0%
!!! ACTTATCCGGTTTTTCAAGC+TGG + chr1_1:52771459-52771478 Msa0028050:CDS 40.0%
!!! CTTATCCGGTTTTTCAAGCT+GGG + chr1_1:52771460-52771479 Msa0028050:CDS 40.0%
GGTGTGTTTAGGGAAAGAAA+TGG + chr1_1:52771488-52771507 Msa0028050:CDS 40.0%
GTTCTTACAGATGAAGAGGT+TGG + chr1_1:52771512-52771531 Msa0028050:CDS 40.0%
GTTGGTTGTTGGCATTATGA+GGG + chr1_1:52771530-52771549 Msa0028050:CDS 40.0%
TTGGCATTATGAGGGAGTTT+AGG + chr1_1:52771538-52771557 Msa0028050:CDS 40.0%
TGGCATTATGAGGGAGTTTA+GGG + chr1_1:52771539-52771558 Msa0028050:CDS 40.0%
GTAAGGTGTGAATCAAACTC+TGG - chr1_1:52771594-52771613 None:intergenic 40.0%
! GTAAGAGTTGGGGATTTTGG+AGG - chr1_1:52770254-52770273 None:intergenic 45.0%
! AGGGTAAGAGTTGGGGATTT+TGG - chr1_1:52770257-52770276 None:intergenic 45.0%
CCCAACTCTTACCCTATCAT+TGG + chr1_1:52770262-52770281 Msa0028050:CDS 45.0%
AGAATATGTTGCACCACAGC+GGG - chr1_1:52770418-52770437 None:intergenic 45.0%
GAGAATATGTTGCACCACAG+CGG - chr1_1:52770419-52770438 None:intergenic 45.0%
! GTAGGACCTTTGTTGTAGCA+AGG - chr1_1:52770454-52770473 None:intergenic 45.0%
CGTTACCTAGAAACTCGAAG+AGG - chr1_1:52770489-52770508 None:intergenic 45.0%
TCAACACTGACGGTGAAAGT+TGG + chr1_1:52770515-52770534 Msa0028050:CDS 45.0%
CCGTTTCAACGAATTTACGG+AGG - chr1_1:52770585-52770604 None:intergenic 45.0%
AATCGCGTTTGGATTCGATC+CGG + chr1_1:52770726-52770745 Msa0028050:CDS 45.0%
TAAACATTGGAACCGAGCGA+CGG + chr1_1:52770869-52770888 Msa0028050:CDS 45.0%
AAGTCCTCTTACTTCAGCGA+CGG - chr1_1:52770905-52770924 None:intergenic 45.0%
GCTTGAAGAAAAGACAGCCT+TGG + chr1_1:52770957-52770976 Msa0028050:CDS 45.0%
GAGATTGTATCCTCCAGTTC+CGG + chr1_1:52771236-52771255 Msa0028050:CDS 45.0%
TCTTTCCCTAAACACACCCT+CGG - chr1_1:52771486-52771505 None:intergenic 45.0%
TGGCGTTCTTACAGATGAAG+AGG + chr1_1:52771508-52771527 Msa0028050:CDS 45.0%
! CAGATGAAGAGGTTGGTTGT+TGG + chr1_1:52771519-52771538 Msa0028050:CDS 45.0%
! GGTTGGTTGTTGGCATTATG+AGG + chr1_1:52771529-52771548 Msa0028050:CDS 45.0%
ATGCGCTTCTCGATCTTTAC+TGG - chr1_1:52771639-52771658 None:intergenic 45.0%
! GTAAGAGTTGGGGATTTTGG+AGG - chr1_1:52770254-52770273 None:intergenic 45.0%
! AGGGTAAGAGTTGGGGATTT+TGG - chr1_1:52770257-52770276 None:intergenic 45.0%
CCCAACTCTTACCCTATCAT+TGG + chr1_1:52770262-52770281 Msa0028050:CDS 45.0%
AGAATATGTTGCACCACAGC+GGG - chr1_1:52770418-52770437 None:intergenic 45.0%
GAGAATATGTTGCACCACAG+CGG - chr1_1:52770419-52770438 None:intergenic 45.0%
! GTAGGACCTTTGTTGTAGCA+AGG - chr1_1:52770454-52770473 None:intergenic 45.0%
CGTTACCTAGAAACTCGAAG+AGG - chr1_1:52770489-52770508 None:intergenic 45.0%
TCAACACTGACGGTGAAAGT+TGG + chr1_1:52770515-52770534 Msa0028050:CDS 45.0%
CCGTTTCAACGAATTTACGG+AGG - chr1_1:52770585-52770604 None:intergenic 45.0%
AATCGCGTTTGGATTCGATC+CGG + chr1_1:52770726-52770745 Msa0028050:CDS 45.0%
TAAACATTGGAACCGAGCGA+CGG + chr1_1:52770869-52770888 Msa0028050:CDS 45.0%
AAGTCCTCTTACTTCAGCGA+CGG - chr1_1:52770905-52770924 None:intergenic 45.0%
GCTTGAAGAAAAGACAGCCT+TGG + chr1_1:52770957-52770976 Msa0028050:CDS 45.0%
GAGATTGTATCCTCCAGTTC+CGG + chr1_1:52771236-52771255 Msa0028050:CDS 45.0%
TCTTTCCCTAAACACACCCT+CGG - chr1_1:52771486-52771505 None:intergenic 45.0%
TGGCGTTCTTACAGATGAAG+AGG + chr1_1:52771508-52771527 Msa0028050:CDS 45.0%
! CAGATGAAGAGGTTGGTTGT+TGG + chr1_1:52771519-52771538 Msa0028050:CDS 45.0%
! GGTTGGTTGTTGGCATTATG+AGG + chr1_1:52771529-52771548 Msa0028050:CDS 45.0%
ATGCGCTTCTCGATCTTTAC+TGG - chr1_1:52771639-52771658 None:intergenic 45.0%
!!! GGGGATTTTGGAGGGTGTTT+TGG - chr1_1:52770245-52770264 None:intergenic 50.0%
CGGTGAAAGTTGGCTGCAAT+GGG - chr1_1:52770298-52770317 None:intergenic 50.0%
ACGGTGAAAGTTGGCTGCAA+TGG - chr1_1:52770299-52770318 None:intergenic 50.0%
TGGAGGACAAAGGTGGAAGA+AGG - chr1_1:52770358-52770377 None:intergenic 50.0%
GAATATGTTGCACCACAGCG+GGG - chr1_1:52770417-52770436 None:intergenic 50.0%
! CGATCCCTCTTCGAGTTTCT+AGG + chr1_1:52770481-52770500 Msa0028050:CDS 50.0%
CACTGACGGTGAAAGTTGGA+AGG + chr1_1:52770519-52770538 Msa0028050:CDS 50.0%
AGAGAAGGGAGGAGATACTC+CGG - chr1_1:52770748-52770767 None:intergenic 50.0%
ACGCGATTTCGGGAAGAGAA+GGG - chr1_1:52770762-52770781 None:intergenic 50.0%
AACGCGATTTCGGGAAGAGA+AGG - chr1_1:52770763-52770782 None:intergenic 50.0%
GTCGCTCGGTTCCAATGTTT+AGG - chr1_1:52770870-52770889 None:intergenic 50.0%
AAAGACAGCCTTGGAATCGG+TGG + chr1_1:52770966-52770985 Msa0028050:CDS 50.0%
! CTGCACTCACGTGGTTCTTT+TGG + chr1_1:52771088-52771107 Msa0028050:CDS 50.0%
ATTGTATCCTCCAGTTCCGG+TGG + chr1_1:52771239-52771258 Msa0028050:CDS 50.0%
GTCGAGCTGACGATGGAAAA+TGG + chr1_1:52771412-52771431 Msa0028050:CDS 50.0%
TGCTTCCAGCGATGGATGAA+GGG + chr1_1:52771562-52771581 Msa0028050:CDS 50.0%
!!! GGGGATTTTGGAGGGTGTTT+TGG - chr1_1:52770245-52770264 None:intergenic 50.0%
CGGTGAAAGTTGGCTGCAAT+GGG - chr1_1:52770298-52770317 None:intergenic 50.0%
ACGGTGAAAGTTGGCTGCAA+TGG - chr1_1:52770299-52770318 None:intergenic 50.0%
TGGAGGACAAAGGTGGAAGA+AGG - chr1_1:52770358-52770377 None:intergenic 50.0%
GAATATGTTGCACCACAGCG+GGG - chr1_1:52770417-52770436 None:intergenic 50.0%
! CGATCCCTCTTCGAGTTTCT+AGG + chr1_1:52770481-52770500 Msa0028050:CDS 50.0%
CACTGACGGTGAAAGTTGGA+AGG + chr1_1:52770519-52770538 Msa0028050:CDS 50.0%
AGAGAAGGGAGGAGATACTC+CGG - chr1_1:52770748-52770767 None:intergenic 50.0%
ACGCGATTTCGGGAAGAGAA+GGG - chr1_1:52770762-52770781 None:intergenic 50.0%
AACGCGATTTCGGGAAGAGA+AGG - chr1_1:52770763-52770782 None:intergenic 50.0%
GTCGCTCGGTTCCAATGTTT+AGG - chr1_1:52770870-52770889 None:intergenic 50.0%
AAAGACAGCCTTGGAATCGG+TGG + chr1_1:52770966-52770985 Msa0028050:CDS 50.0%
! CTGCACTCACGTGGTTCTTT+TGG + chr1_1:52771088-52771107 Msa0028050:CDS 50.0%
ATTGTATCCTCCAGTTCCGG+TGG + chr1_1:52771239-52771258 Msa0028050:CDS 50.0%
GTCGAGCTGACGATGGAAAA+TGG + chr1_1:52771412-52771431 Msa0028050:CDS 50.0%
TGCTTCCAGCGATGGATGAA+GGG + chr1_1:52771562-52771581 Msa0028050:CDS 50.0%
ATGACTGAGCAGGAGCCGAA+GGG - chr1_1:52770385-52770404 None:intergenic 55.0%
GTTTGCCGTGATGACTGAGC+AGG - chr1_1:52770395-52770414 None:intergenic 55.0%
CGATTTCGGGAAGAGAAGGG+AGG - chr1_1:52770759-52770778 None:intergenic 55.0%
GGCTTCTTTCAACCGTCGCT+CGG - chr1_1:52770884-52770903 None:intergenic 55.0%
GAAGCCGTCGCTGAAGTAAG+AGG + chr1_1:52770898-52770917 Msa0028050:CDS 55.0%
CAACTTCAGCTGCACTCACG+TGG + chr1_1:52771079-52771098 Msa0028050:CDS 55.0%
TTAGCATCCACCGGAACTGG+AGG - chr1_1:52771249-52771268 None:intergenic 55.0%
TCCAGTTCCGGTGGATGCTA+AGG + chr1_1:52771248-52771267 Msa0028050:CDS 55.0%
TCCTTAGCATCCACCGGAAC+TGG - chr1_1:52771252-52771271 None:intergenic 55.0%
GCTGCTTCCTTAGCATCCAC+CGG - chr1_1:52771258-52771277 None:intergenic 55.0%
CTGAGTTTCGACCTGAGAGG+TGG + chr1_1:52771385-52771404 Msa0028050:CDS 55.0%
TGGTTGAGTCGAGCTGACGA+TGG + chr1_1:52771405-52771424 Msa0028050:CDS 55.0%
CTCGGCCCAGCTTGAAAAAC+CGG - chr1_1:52771468-52771487 None:intergenic 55.0%
!!! GGTTTTTCAAGCTGGGCCGA+GGG + chr1_1:52771467-52771486 Msa0028050:CDS 55.0%
! GTTTAGGGTGCTTCCAGCGA+TGG + chr1_1:52771554-52771573 Msa0028050:CDS 55.0%
GTGCTTCCAGCGATGGATGA+AGG + chr1_1:52771561-52771580 Msa0028050:CDS 55.0%
GCTTCCAGCGATGGATGAAG+GGG + chr1_1:52771563-52771582 Msa0028050:CDS 55.0%
TCAACCCCTTCATCCATCGC+TGG - chr1_1:52771570-52771589 None:intergenic 55.0%
ATGACTGAGCAGGAGCCGAA+GGG - chr1_1:52770385-52770404 None:intergenic 55.0%
GTTTGCCGTGATGACTGAGC+AGG - chr1_1:52770395-52770414 None:intergenic 55.0%
CGATTTCGGGAAGAGAAGGG+AGG - chr1_1:52770759-52770778 None:intergenic 55.0%
GGCTTCTTTCAACCGTCGCT+CGG - chr1_1:52770884-52770903 None:intergenic 55.0%
GAAGCCGTCGCTGAAGTAAG+AGG + chr1_1:52770898-52770917 Msa0028050:CDS 55.0%
CAACTTCAGCTGCACTCACG+TGG + chr1_1:52771079-52771098 Msa0028050:CDS 55.0%
TTAGCATCCACCGGAACTGG+AGG - chr1_1:52771249-52771268 None:intergenic 55.0%
TCCAGTTCCGGTGGATGCTA+AGG + chr1_1:52771248-52771267 Msa0028050:CDS 55.0%
TCCTTAGCATCCACCGGAAC+TGG - chr1_1:52771252-52771271 None:intergenic 55.0%
GCTGCTTCCTTAGCATCCAC+CGG - chr1_1:52771258-52771277 None:intergenic 55.0%
CTGAGTTTCGACCTGAGAGG+TGG + chr1_1:52771385-52771404 Msa0028050:CDS 55.0%
TGGTTGAGTCGAGCTGACGA+TGG + chr1_1:52771405-52771424 Msa0028050:CDS 55.0%
CTCGGCCCAGCTTGAAAAAC+CGG - chr1_1:52771468-52771487 None:intergenic 55.0%
!!! GGTTTTTCAAGCTGGGCCGA+GGG + chr1_1:52771467-52771486 Msa0028050:CDS 55.0%
! GTTTAGGGTGCTTCCAGCGA+TGG + chr1_1:52771554-52771573 Msa0028050:CDS 55.0%
GTGCTTCCAGCGATGGATGA+AGG + chr1_1:52771561-52771580 Msa0028050:CDS 55.0%
GCTTCCAGCGATGGATGAAG+GGG + chr1_1:52771563-52771582 Msa0028050:CDS 55.0%
TCAACCCCTTCATCCATCGC+TGG - chr1_1:52771570-52771589 None:intergenic 55.0%
TTTGTCCTCCACCGCCCCTT+CGG + chr1_1:52770367-52770386 Msa0028050:CDS 60.0%
TGACTGAGCAGGAGCCGAAG+GGG - chr1_1:52770384-52770403 None:intergenic 60.0%
GATGACTGAGCAGGAGCCGA+AGG - chr1_1:52770386-52770405 None:intergenic 60.0%
CGGCTCCTGCTCAGTCATCA+CGG + chr1_1:52770387-52770406 Msa0028050:CDS 60.0%
GCACACGAATCAGCAGCGAG+AGG + chr1_1:52770803-52770822 Msa0028050:CDS 60.0%
GGGCTGAGTTTCGACCTGAG+AGG + chr1_1:52771382-52771401 Msa0028050:CDS 60.0%
GCTCGACTCAACCACCTCTC+AGG - chr1_1:52771399-52771418 None:intergenic 60.0%
!!! CGGTTTTTCAAGCTGGGCCG+AGG + chr1_1:52771466-52771485 Msa0028050:CDS 60.0%
! CTGGGCCGAGGGTGTGTTTA+GGG + chr1_1:52771478-52771497 Msa0028050:CDS 60.0%
TTTGTCCTCCACCGCCCCTT+CGG + chr1_1:52770367-52770386 Msa0028050:CDS 60.0%
TGACTGAGCAGGAGCCGAAG+GGG - chr1_1:52770384-52770403 None:intergenic 60.0%
GATGACTGAGCAGGAGCCGA+AGG - chr1_1:52770386-52770405 None:intergenic 60.0%
CGGCTCCTGCTCAGTCATCA+CGG + chr1_1:52770387-52770406 Msa0028050:CDS 60.0%
GCACACGAATCAGCAGCGAG+AGG + chr1_1:52770803-52770822 Msa0028050:CDS 60.0%
GGGCTGAGTTTCGACCTGAG+AGG + chr1_1:52771382-52771401 Msa0028050:CDS 60.0%
GCTCGACTCAACCACCTCTC+AGG - chr1_1:52771399-52771418 None:intergenic 60.0%
!!! CGGTTTTTCAAGCTGGGCCG+AGG + chr1_1:52771466-52771485 Msa0028050:CDS 60.0%
! CTGGGCCGAGGGTGTGTTTA+GGG + chr1_1:52771478-52771497 Msa0028050:CDS 60.0%
GAAGGGGCGGTGGAGGACAA+AGG - chr1_1:52770368-52770387 None:intergenic 65.0%
CATCACGGCAAACCCCGCTG+TGG + chr1_1:52770402-52770421 Msa0028050:CDS 65.0%
! GCTGGGCCGAGGGTGTGTTT+AGG + chr1_1:52771477-52771496 Msa0028050:CDS 65.0%
GAAGGGGCGGTGGAGGACAA+AGG - chr1_1:52770368-52770387 None:intergenic 65.0%
CATCACGGCAAACCCCGCTG+TGG + chr1_1:52770402-52770421 Msa0028050:CDS 65.0%
! GCTGGGCCGAGGGTGTGTTT+AGG + chr1_1:52771477-52771496 Msa0028050:CDS 65.0%
GGGGCGGTGGAGGACAAAGG+TGG - chr1_1:52770365-52770384 None:intergenic 70.0%
CTGAGCAGGAGCCGAAGGGG+CGG - chr1_1:52770381-52770400 None:intergenic 70.0%
GGGGCGGTGGAGGACAAAGG+TGG - chr1_1:52770365-52770384 None:intergenic 70.0%
CTGAGCAGGAGCCGAAGGGG+CGG - chr1_1:52770381-52770400 None:intergenic 70.0%
AGGAGCCGAAGGGGCGGTGG+AGG - chr1_1:52770375-52770394 None:intergenic 75.0%
AGCAGGAGCCGAAGGGGCGG+TGG - chr1_1:52770378-52770397 None:intergenic 75.0%
AGGAGCCGAAGGGGCGGTGG+AGG - chr1_1:52770375-52770394 None:intergenic 75.0%
AGCAGGAGCCGAAGGGGCGG+TGG - chr1_1:52770378-52770397 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 52770160 52771674 52770160 ID=Msa0028050;Name=Msa0028050
chr1_1 mRNA 52770160 52771674 52770160 ID=Msa0028050-mRNA-1;Parent=Msa0028050;Name=Msa0028050-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|504
chr1_1 exon 52770160 52771674 52770160 ID=Msa0028050-mRNA-1:exon:15493;Parent=Msa0028050-mRNA-1
chr1_1 CDS 52770160 52771674 52770160 ID=Msa0028050-mRNA-1:cds;Parent=Msa0028050-mRNA-1
Gene Sequence

>Msa0028050

ATGGAATCCGAAACATTGGTTTCTTTATTACTTTTCTCTGCAACTCTCGTTTCGTTCTTATTCTTAGCCACAAAAAAACGATCCAAAACACCCTCCAAAATCCCCAACTCTTACCCTATCATTGGTTCTGTGTTTCCCATTGCAGCCAACTTTCACCGTCTCATACAATGGATTTCTGACATCCTTCAAACTATACCTTCTTCCACCTTTGTCCTCCACCGCCCCTTCGGCTCCTGCTCAGTCATCACGGCAAACCCCGCTGTGGTGCAACATATTCTCAAAACCAACTTCCCTTGCTACAACAAAGGTCCTACATTTCATCGATCCCTCTTCGAGTTTCTAGGTAACGGTATCTTCAACACTGACGGTGAAAGTTGGAAGGTTCAACGACAAATCTCCAGCCGTGAATTCAACACTAAATCCCTCCGTAAATTCGTTGAAACGGTAGTGGATGTTGAACTTAACGATCGTCTGCTTCCTATTCTCCATGAAGCTTCCAAAAACCAAATGATCCTCCCTGATTTTCAAGATATTCTCCAACGTTTTACGTTTGATAATATTTGCATAATCGCGTTTGGATTCGATCCGGAGTATCTCCTCCCTTCTCTTCCCGAAATCGCGTTTGTAAAAGCTTTTGATGACAGCACACGAATCAGCAGCGAGAGGATAAACGCTGCTATTCCATTTCTATGGAAAGTGAAAAAATTCCTAAACATTGGAACCGAGCGACGGTTGAAAGAAGCCGTCGCTGAAGTAAGAGGACTTGCCACAAAAATTGTTAGGGAAAAGAAAAAAGAGCTTGAAGAAAAGACAGCCTTGGAATCGGTGGATATTTTGTCGCGATTTTTAAGTTCTGGTCATTCAGATGAATCTTTTGTAGTTGATATTGTGATAAGCTTTATTCTTGCTGGGAGAGATACAACTTCAGCTGCACTCACGTGGTTCTTTTGGTTAATCTCTAAGCATAGTCATGTAGAGAATGAGATTCTTAAAGAGATTACTAGAAAATCAATGATAGTTAGTTACGATGAGGTGAAGGATATGGTTTACACTCATGCATCGTTATGCGAGAGCATGAGATTGTATCCTCCAGTTCCGGTGGATGCTAAGGAAGCAGCCTACGATGATGTTTTGCCAGATGGAACATTAGTGAAGAAAGGGTGGATAGTTGCGTATCATGTATATGCTATGGGAAGATCTGAGAAAATATGGGGATCTGATTGGGCTGAGTTTCGACCTGAGAGGTGGTTGAGTCGAGCTGACGATGGAAAATGGAGCTTTGTTGGAATGGATCCTTATACTTATCCGGTTTTTCAAGCTGGGCCGAGGGTGTGTTTAGGGAAAGAAATGGCGTTCTTACAGATGAAGAGGTTGGTTGTTGGCATTATGAGGGAGTTTAGGGTGCTTCCAGCGATGGATGAAGGGGTTGAACCAGAGTTTGATTCACACCTTACTTCAATAATGAAAGGTGGCTTTCCAGTAAAGATCGAGAAGCGCATCTACACACATGAATAA
Protein sequence

>Msa0028050

MESETLVSLLLFSATLVSFLFLATKKRSKTPSKIPNSYPIIGSVFPIAANFHRLIQWISDILQTIPSSTFVLHRPFGSCSVITANPAVVQHILKTNFPCYNKGPTFHRSLFEFLGNGIFNTDGESWKVQRQISSREFNTKSLRKFVETVVDVELNDRLLPILHEASKNQMILPDFQDILQRFTFDNICIIAFGFDPEYLLPSLPEIAFVKAFDDSTRISSERINAAIPFLWKVKKFLNIGTERRLKEAVAEVRGLATKIVREKKKELEEKTALESVDILSRFLSSGHSDESFVVDIVISFILAGRDTTSAALTWFFWLISKHSHVENEILKEITRKSMIVSYDEVKDMVYTHASLCESMRLYPPVPVDAKEAAYDDVLPDGTLVKKGWIVAYHVYAMGRSEKIWGSDWAEFRPERWLSRADDGKWSFVGMDPYTYPVFQAGPRVCLGKEMAFLQMKRLVVGIMREFRVLPAMDEGVEPEFDSHLTSIMKGGFPVKIEKRIYTHE*